Miyakogusa Predicted Gene

Lj6g3v1093340.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1093340.1 Non Chatacterized Hit- tr|I1L272|I1L272_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41329
PE,87.01,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; CELL CYCLE CONTROL
PROTEIN 50,Protein of unknown function
DUF284,NODE_57291_length_1060_cov_91.671700.path2.1
         (345 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G46150.1 | Symbols:  | LEM3 (ligand-effect modulator 3) famil...   463   e-131
AT5G46150.2 | Symbols:  | LEM3 (ligand-effect modulator 3) famil...   463   e-131
AT1G54320.1 | Symbols:  | LEM3 (ligand-effect modulator 3) famil...   385   e-107
AT3G12740.1 | Symbols: ALIS1 | ALA-interacting subunit 1 | chr3:...   384   e-107
AT1G16360.1 | Symbols:  | LEM3 (ligand-effect modulator 3) famil...   382   e-106
AT1G79450.1 | Symbols: ALIS5 | ALA-interacting subunit 5 | chr1:...   378   e-105
AT1G79450.2 | Symbols: ALIS5 | ALA-interacting subunit 5 | chr1:...   318   5e-87

>AT5G46150.1 | Symbols:  | LEM3 (ligand-effect modulator 3) family
           protein / CDC50 family protein | chr5:18708735-18710424
           REVERSE LENGTH=343
          Length = 343

 Score =  463 bits (1191), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 215/311 (69%), Positives = 255/311 (81%)

Query: 35  RPAQKGAFYQFTQQNLPACKPVLTPRAVIATFLLMGFIFIPVGLVTLRASYSVVEIEDRY 94
           R  +  A YQF QQ LPACKPVLTP +VI  F+LMGF+FIP+GL+TLRAS   +EI DRY
Sbjct: 19  RSRRSKALYQFKQQKLPACKPVLTPISVITVFMLMGFVFIPIGLITLRASRDAIEIIDRY 78

Query: 95  DIDCVPDQFKSNKVAYIKDDSISKNCSRFLKVPKPMRAPIYIYYQLDNYYQNHRRYVKSR 154
           D++C+P+++++NK+ YI D SI KNC+R+LKV K M+API+IYYQLDNYYQNHRRYVKSR
Sbjct: 79  DVECIPEEYRTNKLLYITDSSIPKNCTRYLKVQKYMKAPIFIYYQLDNYYQNHRRYVKSR 138

Query: 155 SDQQLLHGLGYNHTSSCKPVESSDNLPIVPCGLIAWSMFNDTYMFNRGPTKLKVNRKNIA 214
           SDQQLLHGL Y+HTSSC+P ESS+ LPIVPCGLIAWSMFNDT+ F+R  TKL V+R NIA
Sbjct: 139 SDQQLLHGLEYSHTSSCEPEESSNGLPIVPCGLIAWSMFNDTFTFSRERTKLNVSRNNIA 198

Query: 215 WKSDRDHKFGKHVYPFNFQNGTLIGGGKLDQSVPLSDQEDLIVWMRTAALPSFRKLYGRI 274
           WKSDR+HKFGK+VYP NFQNGTLIGG KLD  +PLSDQED IVWMR AAL SFRKLYGRI
Sbjct: 199 WKSDREHKFGKNVYPINFQNGTLIGGAKLDPKIPLSDQEDFIVWMRAAALLSFRKLYGRI 258

Query: 275 EEDLDADDVIVVHLENNYNTYSFGGKKKLVLSTTSWLGGKNDFLGVANLLVGXXXXXXXX 334
           EEDL+   V+ V+L NNYNTYSF G+KKL+LST++WLGG+NDFLG+  L+VG        
Sbjct: 259 EEDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGGRNDFLGITYLVVGSSSIVISI 318

Query: 335 XXXXXHVKNPR 345
                H+KNPR
Sbjct: 319 IFMLLHLKNPR 329


>AT5G46150.2 | Symbols:  | LEM3 (ligand-effect modulator 3) family
           protein / CDC50 family protein | chr5:18708735-18710424
           REVERSE LENGTH=343
          Length = 343

 Score =  463 bits (1191), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 215/311 (69%), Positives = 255/311 (81%)

Query: 35  RPAQKGAFYQFTQQNLPACKPVLTPRAVIATFLLMGFIFIPVGLVTLRASYSVVEIEDRY 94
           R  +  A YQF QQ LPACKPVLTP +VI  F+LMGF+FIP+GL+TLRAS   +EI DRY
Sbjct: 19  RSRRSKALYQFKQQKLPACKPVLTPISVITVFMLMGFVFIPIGLITLRASRDAIEIIDRY 78

Query: 95  DIDCVPDQFKSNKVAYIKDDSISKNCSRFLKVPKPMRAPIYIYYQLDNYYQNHRRYVKSR 154
           D++C+P+++++NK+ YI D SI KNC+R+LKV K M+API+IYYQLDNYYQNHRRYVKSR
Sbjct: 79  DVECIPEEYRTNKLLYITDSSIPKNCTRYLKVQKYMKAPIFIYYQLDNYYQNHRRYVKSR 138

Query: 155 SDQQLLHGLGYNHTSSCKPVESSDNLPIVPCGLIAWSMFNDTYMFNRGPTKLKVNRKNIA 214
           SDQQLLHGL Y+HTSSC+P ESS+ LPIVPCGLIAWSMFNDT+ F+R  TKL V+R NIA
Sbjct: 139 SDQQLLHGLEYSHTSSCEPEESSNGLPIVPCGLIAWSMFNDTFTFSRERTKLNVSRNNIA 198

Query: 215 WKSDRDHKFGKHVYPFNFQNGTLIGGGKLDQSVPLSDQEDLIVWMRTAALPSFRKLYGRI 274
           WKSDR+HKFGK+VYP NFQNGTLIGG KLD  +PLSDQED IVWMR AAL SFRKLYGRI
Sbjct: 199 WKSDREHKFGKNVYPINFQNGTLIGGAKLDPKIPLSDQEDFIVWMRAAALLSFRKLYGRI 258

Query: 275 EEDLDADDVIVVHLENNYNTYSFGGKKKLVLSTTSWLGGKNDFLGVANLLVGXXXXXXXX 334
           EEDL+   V+ V+L NNYNTYSF G+KKL+LST++WLGG+NDFLG+  L+VG        
Sbjct: 259 EEDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGGRNDFLGITYLVVGSSSIVISI 318

Query: 335 XXXXXHVKNPR 345
                H+KNPR
Sbjct: 319 IFMLLHLKNPR 329


>AT1G54320.1 | Symbols:  | LEM3 (ligand-effect modulator 3) family
           protein / CDC50 family protein | chr1:20275732-20277793
           REVERSE LENGTH=349
          Length = 349

 Score =  385 bits (989), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 184/290 (63%), Positives = 222/290 (76%), Gaps = 1/290 (0%)

Query: 37  AQKGAFYQFTQQNLPACKPVLTPRAVIATFLLMGFIFIPVGLVTLRASYSVVEIEDRYDI 96
           +++  + +FTQQ LPACKP+LTP  VI+TFL++  IFIP+G+++L AS  VVEI DRYD 
Sbjct: 25  SKRPKYSKFTQQELPACKPILTPGWVISTFLIVSVIFIPLGVISLFASQDVVEIVDRYDT 84

Query: 97  DCVPDQFKSNKVAYIKDDSISKNCSRFLKVPKPMRAPIYIYYQLDNYYQNHRRYVKSRSD 156
           +C+P   ++NKVAYI+ D   K C+R LKV K M+ PIY+YYQL+N+YQNHRRYVKSRSD
Sbjct: 85  ECIPAPARTNKVAYIQGDG-DKVCNRDLKVTKRMKQPIYVYYQLENFYQNHRRYVKSRSD 143

Query: 157 QQLLHGLGYNHTSSCKPVESSDNLPIVPCGLIAWSMFNDTYMFNRGPTKLKVNRKNIAWK 216
            QL      N  S+CKP +     PIVPCGLIAWS+FNDTY  +R    L VN+K IAWK
Sbjct: 144 SQLRSTKYENQISACKPEDDVGGQPIVPCGLIAWSLFNDTYALSRNNVSLAVNKKGIAWK 203

Query: 217 SDRDHKFGKHVYPFNFQNGTLIGGGKLDQSVPLSDQEDLIVWMRTAALPSFRKLYGRIEE 276
           SD++HKFG  V+P NFQ G + GG  LD  +PLS+QEDLIVWMRTAALP+FRKLYG+IE 
Sbjct: 204 SDKEHKFGNKVFPKNFQKGNITGGATLDPRIPLSEQEDLIVWMRTAALPTFRKLYGKIES 263

Query: 277 DLDADDVIVVHLENNYNTYSFGGKKKLVLSTTSWLGGKNDFLGVANLLVG 326
           DL+  D I V L NNYNTYSF GKKKLVLSTTSWLGGKNDFLG+A L VG
Sbjct: 264 DLEMGDTIHVKLNNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVG 313


>AT3G12740.1 | Symbols: ALIS1 | ALA-interacting subunit 1 |
           chr3:4049739-4051561 FORWARD LENGTH=350
          Length = 350

 Score =  384 bits (986), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 187/311 (60%), Positives = 230/311 (73%), Gaps = 1/311 (0%)

Query: 35  RPAQKGAFYQFTQQNLPACKPVLTPRAVIATFLLMGFIFIPVGLVTLRASYSVVEIEDRY 94
           R +++  + +FTQQ LPACKP+LTP  VI+TFL++  IFIP+G+++L AS  VVEI DRY
Sbjct: 24  RNSKRPKYSKFTQQELPACKPILTPGWVISTFLIISVIFIPLGVISLFASQDVVEIVDRY 83

Query: 95  DIDCVPDQFKSNKVAYIKDDSISKNCSRFLKVPKPMRAPIYIYYQLDNYYQNHRRYVKSR 154
           D  C+P   ++NKVAYI+    +K+C+R L VPK M+ PIY+YYQL+N+YQNHRRYVKSR
Sbjct: 84  DSACIPLSDRANKVAYIQGTG-NKSCTRTLIVPKRMKQPIYVYYQLENFYQNHRRYVKSR 142

Query: 155 SDQQLLHGLGYNHTSSCKPVESSDNLPIVPCGLIAWSMFNDTYMFNRGPTKLKVNRKNIA 214
           SD QL      N   +CKP +     PIVPCGLIAWS+FNDTY+ +R    L VN+K IA
Sbjct: 143 SDSQLRSVKDENQIDACKPEDDFGGQPIVPCGLIAWSLFNDTYVLSRNNQGLTVNKKGIA 202

Query: 215 WKSDRDHKFGKHVYPFNFQNGTLIGGGKLDQSVPLSDQEDLIVWMRTAALPSFRKLYGRI 274
           WKSD++HKFGK+V+P NFQ G L GG  LD + PLSDQEDLIVWMRTAALP+FRKLYG+I
Sbjct: 203 WKSDKEHKFGKNVFPKNFQKGNLTGGASLDPNKPLSDQEDLIVWMRTAALPTFRKLYGKI 262

Query: 275 EEDLDADDVIVVHLENNYNTYSFGGKKKLVLSTTSWLGGKNDFLGVANLLVGXXXXXXXX 334
           E DL+  + I V L+NNYNTYSF GKKKLVLSTTSWLGGKNDFLG+A L VG        
Sbjct: 263 ESDLEKGENIQVTLQNNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICFVLAL 322

Query: 335 XXXXXHVKNPR 345
                ++  PR
Sbjct: 323 AFTVMYLVKPR 333


>AT1G16360.1 | Symbols:  | LEM3 (ligand-effect modulator 3) family
           protein / CDC50 family protein | chr1:5593493-5595179
           REVERSE LENGTH=336
          Length = 336

 Score =  382 bits (980), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 183/302 (60%), Positives = 223/302 (73%), Gaps = 1/302 (0%)

Query: 44  QFTQQNLPACKPVLTPRAVIATFLLMGFIFIPVGLVTLRASYSVVEIEDRYDIDCVPDQF 103
           +FTQQ LPACKP+LTP+ VI TFL+ G +FIP+G++ L AS  V+EI DRYD DC+P   
Sbjct: 18  RFTQQELPACKPILTPKWVILTFLVSGVVFIPLGVICLFASQGVIEIVDRYDTDCIPLSS 77

Query: 104 KSNKVAYIKDDSISKNCSRFLKVPKPMRAPIYIYYQLDNYYQNHRRYVKSRSDQQLLHGL 163
           + NKV YI+     K C+R + V K M+ P+Y+YYQL+NYYQNHRRYVKSR D QL    
Sbjct: 78  RDNKVRYIQGLE-DKRCNRTITVTKTMKNPVYVYYQLENYYQNHRRYVKSRQDGQLRSPK 136

Query: 164 GYNHTSSCKPVESSDNLPIVPCGLIAWSMFNDTYMFNRGPTKLKVNRKNIAWKSDRDHKF 223
             + T SC P ++    PIVPCGL+AWS+FNDTY F R   KL VN+K+I+WKSDR+ KF
Sbjct: 137 DEHETKSCAPEDTLGGQPIVPCGLVAWSLFNDTYDFTRNNQKLPVNKKDISWKSDRESKF 196

Query: 224 GKHVYPFNFQNGTLIGGGKLDQSVPLSDQEDLIVWMRTAALPSFRKLYGRIEEDLDADDV 283
           GK+V+P NFQ G+LIGG  LDQ +PLS+QEDLIVWMRTAALP+FRKLYG+I+ DL A D 
Sbjct: 197 GKNVFPKNFQKGSLIGGKSLDQDIPLSEQEDLIVWMRTAALPTFRKLYGKIDTDLQAGDT 256

Query: 284 IVVHLENNYNTYSFGGKKKLVLSTTSWLGGKNDFLGVANLLVGXXXXXXXXXXXXXHVKN 343
           I V L+NNYNTYSF GKKKLVLSTTSWLGG+NDFLG+A L VG             ++  
Sbjct: 257 IKVLLQNNYNTYSFNGKKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAVSFSVLYLAK 316

Query: 344 PR 345
           PR
Sbjct: 317 PR 318


>AT1G79450.1 | Symbols: ALIS5 | ALA-interacting subunit 5 |
           chr1:29887831-29889904 FORWARD LENGTH=350
          Length = 350

 Score =  378 bits (970), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 180/311 (57%), Positives = 228/311 (73%), Gaps = 1/311 (0%)

Query: 35  RPAQKGAFYQFTQQNLPACKPVLTPRAVIATFLLMGFIFIPVGLVTLRASYSVVEIEDRY 94
           + +++  + +FTQQ LPACKP+LTPR VI TFL+ G +FIP+G++ L AS  VVEI DRY
Sbjct: 23  KTSKRPKYSRFTQQELPACKPILTPRWVILTFLVAGVVFIPLGVICLFASQGVVEIVDRY 82

Query: 95  DIDCVPDQFKSNKVAYIKDDSISKNCSRFLKVPKPMRAPIYIYYQLDNYYQNHRRYVKSR 154
           D DC+P   ++N VAYI+ +   K C R + V K M+ P+Y+YYQL+N+YQNHRRYVKSR
Sbjct: 83  DTDCIPTSSRNNMVAYIQGEG-DKICKRTITVTKAMKHPVYVYYQLENFYQNHRRYVKSR 141

Query: 155 SDQQLLHGLGYNHTSSCKPVESSDNLPIVPCGLIAWSMFNDTYMFNRGPTKLKVNRKNIA 214
           +D QL      +   +C P ++    PIVPCGL+AWS+FNDTY F+R   +L VN+K I+
Sbjct: 142 NDAQLRSPKEEHDVKTCAPEDNVGGEPIVPCGLVAWSLFNDTYSFSRNSQQLLVNKKGIS 201

Query: 215 WKSDRDHKFGKHVYPFNFQNGTLIGGGKLDQSVPLSDQEDLIVWMRTAALPSFRKLYGRI 274
           WKSDR++KFGK+V+P NFQ G  IGGG L+ S PLS+QEDLIVWMRTAALP+FRKLYG+I
Sbjct: 202 WKSDRENKFGKNVFPKNFQKGAPIGGGTLNISKPLSEQEDLIVWMRTAALPTFRKLYGKI 261

Query: 275 EEDLDADDVIVVHLENNYNTYSFGGKKKLVLSTTSWLGGKNDFLGVANLLVGXXXXXXXX 334
           E DL A D I V L+NNYNTYSF G+KKLVLSTTSWLGG+NDFLG+A L VG        
Sbjct: 262 ETDLHAGDTITVLLQNNYNTYSFNGQKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAV 321

Query: 335 XXXXXHVKNPR 345
                ++  PR
Sbjct: 322 TFAVLYLVKPR 332


>AT1G79450.2 | Symbols: ALIS5 | ALA-interacting subunit 5 |
           chr1:29888665-29889904 FORWARD LENGTH=283
          Length = 283

 Score =  318 bits (814), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 153/259 (59%), Positives = 189/259 (72%), Gaps = 1/259 (0%)

Query: 87  VVEIEDRYDIDCVPDQFKSNKVAYIKDDSISKNCSRFLKVPKPMRAPIYIYYQLDNYYQN 146
           VVEI DRYD DC+P   ++N VAYI+ +   K C R + V K M+ P+Y+YYQL+N+YQN
Sbjct: 8   VVEIVDRYDTDCIPTSSRNNMVAYIQGEG-DKICKRTITVTKAMKHPVYVYYQLENFYQN 66

Query: 147 HRRYVKSRSDQQLLHGLGYNHTSSCKPVESSDNLPIVPCGLIAWSMFNDTYMFNRGPTKL 206
           HRRYVKSR+D QL      +   +C P ++    PIVPCGL+AWS+FNDTY F+R   +L
Sbjct: 67  HRRYVKSRNDAQLRSPKEEHDVKTCAPEDNVGGEPIVPCGLVAWSLFNDTYSFSRNSQQL 126

Query: 207 KVNRKNIAWKSDRDHKFGKHVYPFNFQNGTLIGGGKLDQSVPLSDQEDLIVWMRTAALPS 266
            VN+K I+WKSDR++KFGK+V+P NFQ G  IGGG L+ S PLS+QEDLIVWMRTAALP+
Sbjct: 127 LVNKKGISWKSDRENKFGKNVFPKNFQKGAPIGGGTLNISKPLSEQEDLIVWMRTAALPT 186

Query: 267 FRKLYGRIEEDLDADDVIVVHLENNYNTYSFGGKKKLVLSTTSWLGGKNDFLGVANLLVG 326
           FRKLYG+IE DL A D I V L+NNYNTYSF G+KKLVLSTTSWLGG+NDFLG+A L VG
Sbjct: 187 FRKLYGKIETDLHAGDTITVLLQNNYNTYSFNGQKKLVLSTTSWLGGRNDFLGIAYLTVG 246

Query: 327 XXXXXXXXXXXXXHVKNPR 345
                        ++  PR
Sbjct: 247 SICLFLAVTFAVLYLVKPR 265