Miyakogusa Predicted Gene

Lj6g3v1093250.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1093250.1 Non Chatacterized Hit- tr|I3T8K0|I3T8K0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.28,0,seg,NULL;
UBA,Ubiquitin-associated/translation elongation factor EF1B,
N-terminal, eukaryote; UBIQUI,CUFF.59065.1
         (557 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G12550.1 | Symbols:  | ubiquitin-associated (UBA)/TS-N domain...   599   e-171

>AT2G12550.1 | Symbols:  | ubiquitin-associated (UBA)/TS-N
           domain-containing protein | chr2:5114881-5118486 FORWARD
           LENGTH=562
          Length = 562

 Score =  599 bits (1545), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 306/561 (54%), Positives = 400/561 (71%), Gaps = 21/561 (3%)

Query: 1   MAKLKIAGTWSGILEDVELEAWTIETLREEVAKRSNCAANSINLICAGKILKDAADGTQN 60
           MAKLK+AGTW GILE VELE WT+  LR+EVAKRS     SI LI AGKILKD  D T  
Sbjct: 1   MAKLKVAGTWGGILE-VELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLT 59

Query: 61  LAQLGLKNNSKILASRLA----DQTFIAEEERSRRLARIRTAVSSMAERHADGSLPLEDF 116
           L+QLG+K NSKIL+ R A     ++ +AEEER+RRL+R++ A +++++RHADGSLP++D+
Sbjct: 60  LSQLGIKENSKILSCRQAAPEEGKSIMAEEERARRLSRVKAAATALSKRHADGSLPIQDY 119

Query: 117 NIEVEDQSGKKVRLGSETDQRAVMMGLMLHAKGKRLIRQGNYKDALEVLIMGEESFSLCD 176
           NIE+EDQ G KV+ G+ETDQ A MMGLMLH K K LI    Y DA+EVL M EESF LCD
Sbjct: 120 NIELEDQGGHKVQFGTETDQSAAMMGLMLHTKAKSLIEIEMYSDAVEVLAMAEESFLLCD 179

Query: 177 PKVIELIDNVPILQIDMVWCYFMIRDIRWLSDAGKRLEMARAGIERAHGKDSLRLRILQG 236
           PK++EL+DN+P+++ID+VWCYF++RDI+ LSDAG RL  AR G+ERAHGKD  R+R+LQ 
Sbjct: 180 PKILELVDNLPMMEIDIVWCYFLLRDIKCLSDAGVRLVRARKGLERAHGKDLSRVRLLQA 239

Query: 237 GCYPELALHLRMELLEGVVAYHTGQLEKSRNVLASARAKFAQLQVPDEALSLVMSMGFKE 296
           G  PE+A++LR+ELLEGVVAYHTGQ +K+ N L SA AKF QLQ+PDE LSLVM MGF+E
Sbjct: 240 GQSPEMAIYLRLELLEGVVAYHTGQNDKALNALKSAHAKFLQLQIPDETLSLVMGMGFQE 299

Query: 297 RGAKRALRMNNQDVGSAIDFLVAEKAKKMQKXXXXXXXXXXXXXQKSYGMTPSKKAVDID 356
           + AKRALR+NNQD+ S++DFL+ E+AKK QK             QK YG+TP KKAVD+ 
Sbjct: 300 KDAKRALRLNNQDIASSVDFLIEERAKKAQKREQDLQRQSEILEQKKYGVTPMKKAVDMQ 359

Query: 357 RLKELVSIGFEKELAAEALRRNENDTQQALDDLTNPETNSALQDNIESRKRKRQKQETDS 416
            L+ LVSIG+ +ELAAE+LRRNEND Q+ALD LT+P+ NS +Q  IESRKRKRQ+Q    
Sbjct: 360 MLERLVSIGYARELAAESLRRNENDIQKALDILTDPKVNSTIQAYIESRKRKRQEQLVGI 419

Query: 417 AIENVVQMGFERSRVVAAFEAGGNLEQVLQRL------------TALPEAGSTSENIQPQ 464
           ++  +V MGFER +  +A EAGG+ E  +QRL            T++  A S++ N+  +
Sbjct: 420 SVAELVSMGFERGKATSALEAGGSREDTIQRLLSASVANPGTTTTSVINATSSTNNVGAE 479

Query: 465 XXXXXXXXXXXXXXXXLPDDVISDVLDQMNEVEDPSVAEERDVEMEDELSADIAKSDALD 524
                           + D+   D+ ++ +   D  + EERD E+EDE++ +IA+ DAL 
Sbjct: 480 ---SSGFGGGAEQDSEMKDETTDDIANRASTSSD-GMEEERDSEIEDEIADEIARVDALS 535

Query: 525 DYDIEVDIEGQAITEYLTLLE 545
            YDI +D E +AI EYL +L+
Sbjct: 536 AYDINLDKEIEAINEYLAMLD 556