Miyakogusa Predicted Gene

Lj6g3v1078470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1078470.1 Non Chatacterized Hit- tr|I1L2C9|I1L2C9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,69.65,0,Fip1,Pre-mRNA
polyadenylation factor Fip1; seg,NULL,CUFF.59108.1
         (1322 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G58040.1 | Symbols: ATFIP1[V], FIPS5, ATFIPS5, FIP1[V] | homo...   363   e-100
AT3G66652.2 | Symbols:  | fip1 motif-containing protein | chr3:2...    70   1e-11
AT3G66652.1 | Symbols:  | fip1 motif-containing protein | chr3:2...    70   1e-11

>AT5G58040.1 | Symbols: ATFIP1[V], FIPS5, ATFIPS5, FIP1[V] | homolog
           of yeast FIP1 [V] | chr5:23488865-23494000 FORWARD
           LENGTH=1196
          Length = 1196

 Score =  363 bits (932), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 231/514 (44%), Positives = 274/514 (53%), Gaps = 66/514 (12%)

Query: 1   MEDDDEFGDLYTDVLRPFAISDHHSPQPTT---TIDLNQIPSAAPHDTPPPSTNQNQPGS 57
           ME+DDEFGDLY+DVL+PF       P P     +IDLN               +Q+Q  S
Sbjct: 1   MEEDDEFGDLYSDVLQPFQPPVVLPPPPPLPHRSIDLNL-------------RSQDQDVS 47

Query: 58  -PEIAPELPPRVSPQPDPVXXXXXXXXXXXXXXXXXXXIDPMDRDVKFDIEEDDGGGAAL 116
            P  AP    RVS   D V                       D+D+ FDIEE D   A  
Sbjct: 48  EPNSAP--ISRVSDN-DAVKLSTQDATRQAIVDGGGD-----DKDMSFDIEEPD---ADS 96

Query: 117 EPVIPGL-------------------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQI 157
            P IPGL                   +                              LQI
Sbjct: 97  TPTIPGLFVTGALPGLATDRGVSQVTTRIEQQVGGGGDGGYGGQGEGDDWDSDSEDDLQI 156

Query: 158 VLNDDNRMAM--------ERXXXXXXXXXXXXXXLVIVAGGDPSQGLEEQDWGNNATLAA 209
           VLND +R  M                        LVIVA  DP+Q +EEQ WG +     
Sbjct: 157 VLNDSSRNVMIGGADRRSRMGDNEDDDDEDDEDPLVIVADTDPNQPMEEQMWGEDGLQGI 216

Query: 210 DGEGKDXXXXXXXXXXXXXXXXXXXPKIGYGGHGYHPFHSQFKYVRPGAAPIPGATTSSL 269
           +G+GKD                   PK GY  HGYHPFHSQFKYVRPGAAPIPG   +S+
Sbjct: 217 EGDGKDGGEAGKGSGPGGATGP---PKAGYSSHGYHPFHSQFKYVRPGAAPIPGGA-ASV 272

Query: 270 GGPP-GQIRP---LAIVAGRGRGEWRPPGIKGAAGRGPGLPXXXXXXXXXXXXXXLEFTL 325
           GGP  GQ+RP   L  +AGRGRG+WRP G++ A+    G                L+FTL
Sbjct: 273 GGPSSGQVRPPANLGPMAGRGRGDWRPLGMRNASAAQKGF---HQPWGSNTAGRGLDFTL 329

Query: 326 PSHKTIFEVDIENFEEKPWKYPNVDVSDFFNFGLNEDSWKDYCKQLEQLRLESTMQSKIR 385
           PSHKTIFEVDI++FEEKPW+YP V+++D+FNFGLNE+SWKDYCKQL+Q R+++TMQS+IR
Sbjct: 330 PSHKTIFEVDIDSFEEKPWRYPGVEMTDYFNFGLNEESWKDYCKQLDQHRIQTTMQSRIR 389

Query: 386 VYESGRTEQEYDPDLPPELAAATGIHDVPVENASFVKSDVGQSDVMKGSGRVRLPLPTGR 445
           VYESGRT+Q YDPDLPPELAAATG   VPV++++ VK D  Q D  K    VR  LP GR
Sbjct: 390 VYESGRTDQGYDPDLPPELAAATGAQGVPVDSSNLVKPDSVQGDSAKVPANVRPTLPPGR 449

Query: 446 AIQVEGGYGERLPSIDTRPPRIRDSDAIIEIVLQ 479
            I VE G GERLPSIDTR PR+RD DAIIEIV Q
Sbjct: 450 PIPVETGSGERLPSIDTRAPRMRDLDAIIEIVCQ 483



 Score =  278 bits (710), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 240/643 (37%), Positives = 350/643 (54%), Gaps = 66/643 (10%)

Query: 681  EDGIEKKQKLTSEVEQPLLDEVDDWEDSKTARSSDNSKARSAGSRDNQKQRESLDEEVVQ 740
            E G E K   TS   Q  + E DD  +SKT RSS++SKARS   RD Q++     E+V+Q
Sbjct: 586  EMGEELKMSFTSP--QSAVQE-DDGGESKTERSSESSKARSGSHRDFQQE-----EDVIQ 637

Query: 741  DPRSAQVDSIRQPPDENEQGFHRRERDGKQEPERNRMVLKG-REGSYPYKDRHRSSVH-- 797
            D  S++  + R+  D N     R+ +D  +E ER R   KG RE S P+ +   + ++  
Sbjct: 638  DKHSSRPANNRKQYDNNAPHQSRKNQDRGKEMERTRAASKGGRENSNPHMELDSTYIYSI 697

Query: 798  ANTDGFDRQKDRDNSDMDWAGRDDDLFSRRV---------RNDEPRKRDRAKVRENERNN 848
            A+ + FD++K+RD     W  ++DD +SRR          R D+P  R R K+RENE  +
Sbjct: 698  ASREDFDKRKERDVDGAVWRRKEDDPYSRRGGDEGSRKRDREDDPGFRQRGKMRENEIRS 757

Query: 849  KEDSLHSRKQLDNGSYRVPYDKDIGPRDSRHRERDEGLRIRYEAVDDYHGKRRRDEEYLR 908
            K+D + SRK +D                      D G+R  YE  DD+  KRR+DEEYLR
Sbjct: 758  KDDQVPSRKHMD----------------------DAGMRNIYEP-DDHINKRRKDEEYLR 794

Query: 909  REHIDKEEILHGYRENASXXXXXXDGLLDPRKRDELQRSRDYPDDQYAGRLKDDTWLLXX 968
            R   +K EI +G RE+ S      D  L+ +KRD   + RD  DD  + R +DD ++   
Sbjct: 795  RSRPEKNEISYGQRESMSRVKRERDDRLEHQKRDVQHKIRDDFDDHGSLRQRDDIYMQRD 854

Query: 969  XXXXXXXXXXWHRMKQPHEEHLPKREREEGRASLRSGRGSDEKAWVGHVSAKDEQKFSEK 1028
                        ++K PHE+ +  R RE  + ++R  RGS++++       KDE K S+K
Sbjct: 855  GNERLRERDVLDKLKLPHEDGISARGRER-QVAVRGHRGSEDRS----SRMKDEYKASDK 909

Query: 1029 EYQGREVVRHNDQLKRRDRIQDESP-HHKGRDDAYTRGNQYATDEKXXXXXXXXXXGDHV 1087
            E+  ++ +RH  Q KRRD   +ES  HH+G +D   R +    +EK           D  
Sbjct: 910  EHVTKDTLRHAKQTKRRDYPGEESSSHHRGHEDFSARTDNIVNNEKKPRQERTGAKIDKF 969

Query: 1088 ANASDNQRAHERKHKEGSRKSKERDVSDLNSLGLAKKSQEIQSGSSNEKGLKASGNEDRA 1147
             +  D QR  +RKHK+  RK KE+      +  L+K+ +  Q+GSS   G K + +    
Sbjct: 970  IDTLDGQRLQDRKHKDSRRKIKEQRE---GTESLSKQGE--QNGSSVVTGSKGTNDARNC 1024

Query: 1148 QREIPGH-RMSRKHQDGMSSDDEQHDSRRGRSKLERWTSHKERDFSIGKSSSSLKFKVPE 1206
            + EIP     +++H++  SS DE HDS+RGR+KLERW SHKER+ ++   SSS+  K+ E
Sbjct: 1025 RSEIPHQPNTAKRHKENASSGDEIHDSKRGRTKLERWASHKEREDAVSAKSSSISSKLEE 1084

Query: 1207 KDNDDGSSEAGKPVDESV-KTVDVDNQHLSSAEAKESADL-ESRDADRKDSGDQRLDTVE 1264
            K+N+  +    +PV  S+ K+ DV        E K   DL +++D   K  GD+ LDTVE
Sbjct: 1085 KENNT-NGRLSEPVHGSIGKSRDV-------TEEKIGHDLADTKDGSEKGPGDRHLDTVE 1136

Query: 1265 RLKKRSERFKLPMPSEKEAIVIKKLESEPLPSATQSETPVETE 1307
            +LKKRSERFKLPMP+EK+   +KK+ESE LPSA + E PV++E
Sbjct: 1137 KLKKRSERFKLPMPTEKDTTGVKKMESETLPSA-KIEGPVDSE 1178


>AT3G66652.2 | Symbols:  | fip1 motif-containing protein |
           chr3:2084030-2087556 FORWARD LENGTH=997
          Length = 997

 Score = 69.7 bits (169), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 29/49 (59%), Positives = 36/49 (73%)

Query: 323 FTLPSHKTIFEVDIENFEEKPWKYPNVDVSDFFNFGLNEDSWKDYCKQL 371
           F  P  +T F+V+++  E+KPW+ P  D SDFFNFGLNE SWKDYCK L
Sbjct: 149 FPNPWSRTPFDVNLDVLEKKPWRDPGTDTSDFFNFGLNEQSWKDYCKPL 197


>AT3G66652.1 | Symbols:  | fip1 motif-containing protein |
           chr3:2084030-2087556 FORWARD LENGTH=997
          Length = 997

 Score = 69.7 bits (169), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 29/49 (59%), Positives = 36/49 (73%)

Query: 323 FTLPSHKTIFEVDIENFEEKPWKYPNVDVSDFFNFGLNEDSWKDYCKQL 371
           F  P  +T F+V+++  E+KPW+ P  D SDFFNFGLNE SWKDYCK L
Sbjct: 149 FPNPWSRTPFDVNLDVLEKKPWRDPGTDTSDFFNFGLNEQSWKDYCKPL 197