Miyakogusa Predicted Gene

Lj6g3v1078310.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1078310.1 Non Chatacterized Hit- tr|I1JGN9|I1JGN9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,86.21,0,FA_desaturase,Fatty acid desaturase, type 1,CUFF.58971.1
         (155 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G30950.1 | Symbols: FAD6, FADC, SFD4 | fatty acid desaturase ...   271   9e-74
AT2G29980.1 | Symbols: FAD3 | fatty acid desaturase 3 | chr2:127...    49   1e-06
AT5G05580.1 | Symbols: FAD8 | fatty acid desaturase 8 | chr5:166...    47   4e-06

>AT4G30950.1 | Symbols: FAD6, FADC, SFD4 | fatty acid desaturase 6 |
           chr4:15057278-15059673 REVERSE LENGTH=448
          Length = 448

 Score =  271 bits (694), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 121/143 (84%), Positives = 132/143 (92%)

Query: 12  KFWLMPWLGYHFWMSTFTVVHHTAPHIPFKSSGEWNAAQAQLNGTIHCDYPKWVEILCHD 71
           KFWLMPWLGYHFWMSTFT+VHHTAPHIPFK + EWNAAQAQLNGT+HCDYP W+EILCHD
Sbjct: 304 KFWLMPWLGYHFWMSTFTMVHHTAPHIPFKPADEWNAAQAQLNGTVHCDYPSWIEILCHD 363

Query: 72  INVHIPHHISPRIPWYNLRAAHKSLQENWGKYMNEATWNWRLMKTIMTVCHVYDKERNYV 131
           INVHIPHHISPRIP YNLRAAH+S+QENWGKY N ATWNWRLMKTIMTVCHVYDKE NY+
Sbjct: 364 INVHIPHHISPRIPSYNLRAAHESIQENWGKYTNLATWNWRLMKTIMTVCHVYDKEENYI 423

Query: 132 AFDELYPEESRPVTLLRKAMPDY 154
            FD L PEES+P+T L+KAMP+Y
Sbjct: 424 PFDRLAPEESQPITFLKKAMPNY 446


>AT2G29980.1 | Symbols: FAD3 | fatty acid desaturase 3 |
           chr2:12781787-12784946 REVERSE LENGTH=386
          Length = 386

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 4/100 (4%)

Query: 9   ARFKFWLMPWLGYHFWMSTFTVVHHTA--PHIPFKSSGEWNAAQAQLNGTIHCDYPKWVE 66
           A  K + +P++ +  W+   T +HH      +P+    EW+  +  L  TI  DY  +  
Sbjct: 238 AVLKVYGVPYIIFVMWLDAVTYLHHHGHDEKLPWYRGKEWSYLRGGLT-TIDRDYGIFNN 296

Query: 67  ILCHDINVHIPHHISPRIPWYNLRAAHKSLQENWGKYMNE 106
           I  HDI  H+ HH+ P+IP Y+L  A K+ +   G+Y  E
Sbjct: 297 I-HHDIGTHVIHHLFPQIPHYHLVDATKAAKHVLGRYYRE 335


>AT5G05580.1 | Symbols: FAD8 | fatty acid desaturase 8 |
           chr5:1664331-1666345 FORWARD LENGTH=435
          Length = 435

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 4/98 (4%)

Query: 11  FKFWLMPWLGYHFWMSTFTVVHHTA--PHIPFKSSGEWNAAQAQLNGTIHCDYPKWVEIL 68
            K + +P+  +  W+   T +HH      +P+    EW+  +  L  T+  DY  W+  +
Sbjct: 295 LKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLT-TLDRDY-GWINNI 352

Query: 69  CHDINVHIPHHISPRIPWYNLRAAHKSLQENWGKYMNE 106
            HDI  H+ HH+ P+IP Y+L  A ++ +   GKY  E
Sbjct: 353 HHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYRE 390