Miyakogusa Predicted Gene

Lj6g3v1067120.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1067120.1 tr|A9SXZ9|A9SXZ9_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_85491
,30.18,0.000000000001,PREDICTED: SIMILAR TO SMALL HEAT SHOCK PROTEIN
24.1,NULL; SMALL HEAT-SHOCK PROTEIN (HSP20) FAMILY,NU,CUFF.58916.1
         (253 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G06460.1 | Symbols: ACD32.1, ACD31.2 | alpha-crystallin domai...   181   4e-46
AT1G07400.1 | Symbols:  | HSP20-like chaperones superfamily prot...    52   4e-07
AT1G52560.2 | Symbols:  | HSP20-like chaperones superfamily prot...    50   2e-06
AT1G52560.1 | Symbols:  | HSP20-like chaperones superfamily prot...    50   2e-06
AT1G59860.1 | Symbols:  | HSP20-like chaperones superfamily prot...    48   6e-06

>AT1G06460.1 | Symbols: ACD32.1, ACD31.2 | alpha-crystallin domain
           32.1 | chr1:1967308-1969414 REVERSE LENGTH=285
          Length = 285

 Score =  181 bits (459), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/272 (41%), Positives = 154/272 (56%), Gaps = 40/272 (14%)

Query: 16  HFAPS--DEISTTHVLPLNCSGSMNSVLSRRDNKVYFARQASASFGYFMRQAS------- 66
           HF  +  D  ST  ++PLNCS S+N+V+ R DNK+ FARQAS+  G+FMR AS       
Sbjct: 18  HFPATSYDSASTASLVPLNCSSSLNTVIQRCDNKISFARQASSEQGFFMRPASPDDVLEN 77

Query: 67  ---------VKEGDSTTFIAPKIHGGKS----EGPSNSRA-PCFARPARTEPMTKVQGGD 112
                    V+ GD+  + A +    +     +  +N R  P  A  +     TK  G D
Sbjct: 78  LGMNLKNTVVRRGDNRLYFARQASSAQGFFMRQASTNERTIPHDAAASTKFSATKTTGFD 137

Query: 113 SSS--IEPPKFSRPSKQ-----------IGQRNQLNYKKNSCHPDTGTVWSPRMDVVESE 159
           SSS     P FS+P+K+             +R +L+  K +   + GTVWSPR +V ES 
Sbjct: 138 SSSPAYAAPHFSKPAKEDIFFPSLSPNLQKERPKLDLPKLA---NLGTVWSPRSNVAEST 194

Query: 160 GKYVIAVEVPGVSINDIRVEVDDQKLCVKGRRSTSYLRVAGCPKTSSFSSYHKREILHGP 219
             YV+A+E+PG SINDIRVEVD+  L V GRR++   +V    K +S   YHK+EIL GP
Sbjct: 195 HSYVVAIELPGASINDIRVEVDNTNLTVTGRRTSICQKVDAGTK-ASILGYHKQEILQGP 253

Query: 220 YEVVWSLPPGVNMDNISAEFSDGFLQIIVPKV 251
           ++V W LP  VN DN+SAEF DG L+I++PK+
Sbjct: 254 FKVSWPLPSNVNKDNVSAEFMDGILRIVIPKL 285


>AT1G07400.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:2275148-2275621 FORWARD LENGTH=157
          Length = 157

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 9/114 (7%)

Query: 139 NSCHPDTGTVWSPRMDVVESEGKYVIAVEVPGVSINDIRVEV-DDQKLCVKGRRSTSYLR 197
           +S   +T  + + R+D  E+   +V   ++PG+   +++VE+ DD  L + G R      
Sbjct: 36  SSLSGETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERH----- 90

Query: 198 VAGCPKTSSFSSYHKREILHGPYEVVWSLPPGVNMDNISAEFSDGFLQIIVPKV 251
                K     ++H+ E   G +   + LP  V MD + A   +G L + VPKV
Sbjct: 91  ---VEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVLTVTVPKV 141


>AT1G52560.2 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:19574783-19575766 REVERSE LENGTH=225
          Length = 225

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 6/97 (6%)

Query: 155 VVESEGKYVIAVEVPGVSINDIRVEVDDQKLCVKGRRSTSYLRVAGCPKTSSFSSYHKRE 214
           V E +  Y +  EVPG++  D+++ V+D  L +KG       +  G P+   + S     
Sbjct: 122 VKEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGDHKAEEEK--GSPEEDEYWSSKS-- 177

Query: 215 ILHGPYEVVWSLPPGVNMDNISAEFSDGFLQIIVPKV 251
             +G Y    SLP    +++I AE  +G L +++P+ 
Sbjct: 178 --YGYYNTSLSLPDDAKVEDIKAELKNGVLNLVIPRT 212


>AT1G52560.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:19574783-19575766 REVERSE LENGTH=232
          Length = 232

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 6/97 (6%)

Query: 155 VVESEGKYVIAVEVPGVSINDIRVEVDDQKLCVKGRRSTSYLRVAGCPKTSSFSSYHKRE 214
           V E +  Y +  EVPG++  D+++ V+D  L +KG       +  G P+   + S     
Sbjct: 129 VKEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGDHKAEEEK--GSPEEDEYWSSKS-- 184

Query: 215 ILHGPYEVVWSLPPGVNMDNISAEFSDGFLQIIVPKV 251
             +G Y    SLP    +++I AE  +G L +++P+ 
Sbjct: 185 --YGYYNTSLSLPDDAKVEDIKAELKNGVLNLVIPRT 219


>AT1G59860.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:22031474-22031941 FORWARD LENGTH=155
          Length = 155

 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 9/101 (8%)

Query: 152 RMDVVESEGKYVIAVEVPGVSINDIRVEV-DDQKLCVKGRRSTSYLRVAGCPKTSSFSSY 210
           R+D  E+   +V   ++PG+   +++VE+ DD  L + G R           K     ++
Sbjct: 47  RVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVE--------KEEKQDTW 98

Query: 211 HKREILHGPYEVVWSLPPGVNMDNISAEFSDGFLQIIVPKV 251
           H+ E   G +   + LP  V MD + A   +G L + VPKV
Sbjct: 99  HRVERSSGGFSRKFRLPENVKMDQVKASMENGVLTVTVPKV 139