Miyakogusa Predicted Gene

Lj6g3v1067110.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1067110.1 Non Chatacterized Hit- tr|I1JJ66|I1JJ66_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.29256 PE,87.84,0,C2H2
and C2HC zinc fingers,NULL; seg,NULL; KIN17 (KIN, ANTIGENIC
DETERMINANT OF RECA PROTEIN HOMOLOG,CUFF.58915.1
         (371 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G55460.1 | Symbols:  | DNA/RNA-binding protein Kin17, conserv...   518   e-147
AT5G51795.1 | Symbols:  | DNA/RNA-binding protein Kin17, conserv...   303   2e-82
AT4G25020.1 | Symbols:  | D111/G-patch domain-containing protein...    49   8e-06

>AT1G55460.1 | Symbols:  | DNA/RNA-binding protein Kin17, conserved
           region | chr1:20707567-20708802 FORWARD LENGTH=411
          Length = 411

 Score =  518 bits (1333), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 260/386 (67%), Positives = 307/386 (79%), Gaps = 20/386 (5%)

Query: 1   MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSEGHQRQMQVFGQN 60
           MGKN+FLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSE HQRQMQVFGQN
Sbjct: 1   MGKNDFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQVFGQN 60

Query: 61  PTRIIEGYSEEFEKSFLEHMKRSHRFSRIAATVVYNEYINDRHHVHMNSTEWATLTEFVK 120
           PTR+++GYSEEFE++FL+ M+RSHRFSRIAATVVYNEYINDRHHVHMNSTEWATLTEF+K
Sbjct: 61  PTRVVDGYSEEFEQTFLDLMRRSHRFSRIAATVVYNEYINDRHHVHMNSTEWATLTEFIK 120

Query: 121 YLGRTGKCKVDETPKGWFITYIDRDSETLFKERMKNKRIKADMADXXXXXXXXXXXXXXA 180
           +LG+TGKCKV+ETPKGWFITYIDRDSETLFKER+KNKR+K+D+A+              A
Sbjct: 121 HLGKTGKCKVEETPKGWFITYIDRDSETLFKERLKNKRVKSDLAEEEKQEREIQRQIERA 180

Query: 181 AQLMQPPNSDPDQPS----------LVEPPRELNVEDGVKIGFSLGSLAR--PGTKEKPE 228
           A+ +     + +               +   +L ++ GVK+GF+LG   +     KE+ E
Sbjct: 181 AEKLNGGGGEGETSGNDEVVDDGDDERKKDEDLRLKSGVKVGFALGGGVKQVATGKERGE 240

Query: 229 ASRVAFDEVGEEKYEEINNGNNLKRKGSGG-----GKSTLDELMRDEEKKKEKMNRKDYW 283
           +S++ F   G+E+ +++  G   KR G  G      +S LDELM++EEKKKE+MNRKDYW
Sbjct: 241 SSKLLF---GDEENDKVERGEKRKRSGDSGRSEKERRSALDELMKEEEKKKERMNRKDYW 297

Query: 284 LHEGTVVKVMSKALAEKGYYKQKGVVRKVIDKYVGEIEMLESKHVLRVDQAELETVIPQV 343
           L EG +VKVMSKALAEKGYYKQKGVV+KVID YVGEI+ML+SKHVLRVDQ ELETV+PQ+
Sbjct: 298 LFEGIIVKVMSKALAEKGYYKQKGVVKKVIDNYVGEIKMLDSKHVLRVDQKELETVLPQI 357

Query: 344 GGRVKIVNGAYRGSLARLLGVDTEHF 369
           GG VKIVNGAYRGS ARLLGVDTE F
Sbjct: 358 GGMVKIVNGAYRGSNARLLGVDTEKF 383


>AT5G51795.1 | Symbols:  | DNA/RNA-binding protein Kin17, conserved
           region | chr5:21043083-21044194 REVERSE LENGTH=347
          Length = 347

 Score =  303 bits (775), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 178/368 (48%), Positives = 225/368 (61%), Gaps = 66/368 (17%)

Query: 2   GKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSEGHQRQMQVFGQNP 61
           G+  ++ P+      K++   K     QMC+KQCRDENGFKCHCMSE HQRQMQV GQNP
Sbjct: 18  GQERYVNPEGDVESNKSERTSKASMVFQMCEKQCRDENGFKCHCMSESHQRQMQVLGQNP 77

Query: 62  TRIIEGYSEEFEKSFLEHMKRSHRFSRIAATVVYNEYINDRHHVHMNSTEWATLTEFVKY 121
           TR++ GYS+EFE++FL+ M+RSHRFSR+AATVVYNEYINDR HVHMNST+WATLTE    
Sbjct: 78  TRVVNGYSQEFEQTFLDLMRRSHRFSRVAATVVYNEYINDRLHVHMNSTKWATLTE---- 133

Query: 122 LGRTGKCKVDETPKGWFITYIDRDSETLFKERMKNKRIKADMADXXXXXXXXXXXXXXAA 181
                           FI Y+ + +E   +ER   K+I+   A                 
Sbjct: 134 ----------------FIKYLGKTAEEEKQEREIQKQIERASAGCEGKDVVVDDDDNDDD 177

Query: 182 QLMQPPNSDPDQPSLVEPPRELNVEDGVKIGFSLGSLARPGTKEKPEASRVAFDEVGEEK 241
           +  +  +                     K+GF+LG     G KE+ E+S++ F   G+E+
Sbjct: 178 EKKKDEDFRLK-----------------KVGFALG----LGVKERGESSKLVF---GDEE 213

Query: 242 YEEINNGNNLKRKGSGGGKSTLDELMRDEEKKKEKMNRKDYWLHEGTVVKVMSKALAEKG 301
            +++  G+  KR       S LDELM++EEKKKE+MNRKDYWL EG +VK          
Sbjct: 214 NDKVERGDKRKR-------SALDELMKEEEKKKERMNRKDYWLFEGIIVK---------- 256

Query: 302 YYKQKGVVRKVIDKYVGEIEMLESKHVLRVDQAELETVIPQVGGRVKIVNGAYRGSLARL 361
                GVV++VIDKYVGEIEMLESKHVLRVDQ EL+TV+PQ+GG VKIVNGAYRGS  RL
Sbjct: 257 -----GVVKRVIDKYVGEIEMLESKHVLRVDQVELKTVLPQIGGMVKIVNGAYRGSNTRL 311

Query: 362 LGVDTEHF 369
           L +DTE F
Sbjct: 312 LDLDTEKF 319


>AT4G25020.1 | Symbols:  | D111/G-patch domain-containing protein |
           chr4:12860805-12861932 REVERSE LENGTH=375
          Length = 375

 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 1/89 (1%)

Query: 280 KDYWLHEGTVVKVMSKALAEKGYYKQKGVVRKVIDKYVGEIEMLESKHVLR-VDQAELET 338
           K  WL     V+++SK +     Y +K VV  V+     +I M E++ +++ +DQ  LET
Sbjct: 253 KTSWLRSHIKVRIISKDVKGGRLYLKKAVVTDVVGPTSCDIAMDETQELVQGIDQELLET 312

Query: 339 VIPQVGGRVKIVNGAYRGSLARLLGVDTE 367
            +P+ GG V +++G ++G   RL+  D +
Sbjct: 313 ALPRRGGSVLVLSGRHKGVYGRLVEKDLD 341