Miyakogusa Predicted Gene
- Lj6g3v1065780.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1065780.1 Non Chatacterized Hit- tr|D7L4T7|D7L4T7_ARALL
Putative uncharacterized protein OS=Arabidopsis lyrata,26,3e-18,A
Receptor for Ubiquitination Targets,F-box domain, cyclin-like;
F_box_assoc_1: F-box protein intera,CUFF.58888.1
(514 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G06240.1 | Symbols: | F-box family protein | chr3:1887336-18... 113 3e-25
AT3G07870.1 | Symbols: | F-box and associated interaction domai... 86 6e-17
AT1G11620.1 | Symbols: | F-box and associated interaction domai... 81 1e-15
AT3G21120.1 | Symbols: | F-box and associated interaction domai... 76 7e-14
AT1G12855.1 | Symbols: | F-box family protein | chr1:4382223-43... 67 2e-11
AT3G23880.1 | Symbols: | F-box and associated interaction domai... 65 1e-10
AT2G43260.1 | Symbols: | F-box and associated interaction domai... 64 3e-10
AT3G17490.1 | Symbols: | F-box and associated interaction domai... 64 3e-10
AT1G33530.1 | Symbols: | F-box family protein | chr1:12159884-1... 63 6e-10
AT5G47300.1 | Symbols: | F-box and associated interaction domai... 62 1e-09
AT1G53550.1 | Symbols: | F-box family protein | chr1:19983411-1... 61 2e-09
AT3G23260.1 | Symbols: | F-box and associated interaction domai... 61 2e-09
AT5G15660.1 | Symbols: | F-box and associated interaction domai... 60 4e-09
AT5G50220.1 | Symbols: | F-box family protein | chr5:20446068-2... 59 7e-09
AT1G26515.1 | Symbols: | F-box and associated interaction domai... 59 8e-09
AT4G12560.2 | Symbols: CPR30 | F-box and associated interaction ... 57 3e-08
AT4G12560.1 | Symbols: CPR30 | F-box and associated interaction ... 57 3e-08
AT1G49790.2 | Symbols: | F-box associated ubiquitination effect... 56 5e-08
AT1G49790.1 | Symbols: | F-box associated ubiquitination effect... 56 5e-08
AT1G53360.1 | Symbols: | F-box associated ubiquitination effect... 54 2e-07
AT2G30380.1 | Symbols: | Plant protein of unknown function (DUF... 54 3e-07
AT1G33020.1 | Symbols: | F-box and associated interaction domai... 54 3e-07
AT2G32470.1 | Symbols: | F-box associated ubiquitination effect... 53 4e-07
AT4G22390.1 | Symbols: | F-box associated ubiquitination effect... 53 6e-07
AT5G10340.1 | Symbols: | F-box family protein | chr5:3253122-32... 51 2e-06
AT2G27520.1 | Symbols: | F-box and associated interaction domai... 51 2e-06
AT3G57590.1 | Symbols: | F-box and associated interaction domai... 50 3e-06
AT2G21930.1 | Symbols: | F-box associated ubiquitination effect... 50 3e-06
AT1G32600.1 | Symbols: | F-box associated ubiquitination effect... 50 3e-06
AT1G52490.1 | Symbols: | CONTAINS InterPro DOMAIN/s: F-box doma... 50 4e-06
AT3G10790.1 | Symbols: | F-box associated ubiquitination effect... 49 1e-05
>AT3G06240.1 | Symbols: | F-box family protein |
chr3:1887336-1888619 FORWARD LENGTH=427
Length = 427
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 126/470 (26%), Positives = 202/470 (42%), Gaps = 78/470 (16%)
Query: 28 LWRQTLSSVAMKRRRGKRVADKVDDEPESQQLGASFADLPTHITTDILLRLPVKSILICK 87
LW + + +RRR +K PES L P I T+ILLRLP KSI +
Sbjct: 7 LWEAIMEATKRERRREDDDGEKA--SPESLVL-------PPEIITEILLRLPAKSIGRFR 57
Query: 88 SVCTSWKALISDPHFAKSHFEHGPTGFTIRTRHWDGDSRILHLIESEPEIFENDDYGQFC 147
V + L SDP FAK H + ++R+ H LI S ++ + D+
Sbjct: 58 CVSKLFCTLSSDPGFAKIHLDLILRNESVRSLHR-------KLIVSSHNLY-SLDFNSIG 109
Query: 148 YCKQDFIKPECNCHLKLERKLKLPL----HGAKLVLDKR---DVNGKRGRQRNHISCKPE 200
+D E N LK + + + G L D+R +N K R RN +
Sbjct: 110 DGIRDLAAVEHNYPLKDDPSIFSEMIRNYVGDHLYDDRRVMLKLNAKSYR-RNWV----- 163
Query: 201 IDRFDVVNSCNGLLCLSDRDSDYIVVCNPVTGEFIRLPEA--TTRIVKTRDMWLHEIYMG 258
++V S NGL+C+S + + + NP TG+ RLPE + RD + + Y G
Sbjct: 164 ----EIVGSSNGLVCISPGEG-AVFLYNPTTGDSKRLPENFRPKSVEYERDNF--QTY-G 215
Query: 259 FGFQPKTNEYKVVRILKRFWGWQEKRNVVVEIHTLGASRWRNVGVDL-----DPRYLTFP 313
FGF T++YK+V+++ + + +++L A WR + +L D Y +
Sbjct: 216 FGFDGLTDDYKLVKLVA-----TSEDILDASVYSLKADSWRRI-CNLNYEHNDGSYTSGV 269
Query: 314 RFPTCVSGALHWFMKLS------ILCFNFESERFQSFPSPPILFK-EHSMGNITMGELKG 366
F +GA+HW S ++ F+ ++E F+ P P H N +G L G
Sbjct: 270 HF----NGAIHWVFTESRHNQRVVVAFDIQTEEFREMPVPDEAEDCSHRFSNFVVGSLNG 325
Query: 367 SLYICDSSSSSHGHTRIKMWIMKKYGFGESWTKVLNIDTIRTDRWPYGQYFPVKYFKNDA 426
L + +S H +W+M +YG +SW+++ I+ + Y P+ KND
Sbjct: 326 RLCVVNSCYDVHD----DIWVMSEYGEAKSWSRI-RINLL------YRSMKPLCSTKNDE 374
Query: 427 AILMFHSCYTLRHRFIYYEPEKNKFKKFKVLGIGTQSTFEVIPHIHNLIS 476
+L+ L + Y E N + G+ FE ++ +LIS
Sbjct: 375 EVLL-----ELDGDLVLYNFETNASSNLGICGVKLSDGFEANTYVESLIS 419
>AT3G07870.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:2510871-2512124
FORWARD LENGTH=417
Length = 417
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 173/449 (38%), Gaps = 109/449 (24%)
Query: 66 LPTHITTDILLRLPVKSILICKSVCTSWKALISDPHFAKSHFEHGPTGFTIRTRHWDGDS 125
LP I DI RLP+ SI VC SW+++++
Sbjct: 28 LPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQ-------------------------- 61
Query: 126 RILHLIESEPEIFENDDYGQFCYCKQDFIKPECNCHLKLERKLKLPLHGAKLVLDKRDVN 185
+G+ KP H + ++ LH L +++ +
Sbjct: 62 -----------------HGRLSSSSSSPTKPCLLLHC--DSPIRNGLHFLDLSEEEKRIK 102
Query: 186 GKRGRQRNHISCKPEIDRFDVVNSCNGLLCLSDR-DSDYIVVCNPVTGEFIRLPEATTRI 244
K+ R S PE FDVV SCNGLLCLSD +D + + NP T + LPE +
Sbjct: 103 TKKFTLR-FASSMPE---FDVVGSCNGLLCLSDSLYNDSLYLYNPFTTNSLELPECSN-- 156
Query: 245 VKTRDMWLHEIYMGFGFQPKTNEYKVVRI------------LKRFWGWQEKRNVVVEIHT 292
K D E+ GFGF T EYKV++I + R G + + V+I T
Sbjct: 157 -KYHD---QELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQILT 212
Query: 293 LGAS------RWRNVGVDLDPRYLTFPRFPTCVSGALHWFMK-------LSILCFNFESE 339
L + WR++G P V+G LH+ + + F+ E E
Sbjct: 213 LSSKTTDQSLSWRSLGK--APYKFVKRSSEALVNGRLHFVTRPRRHVPDRKFVSFDLEDE 270
Query: 340 RFQSFPSPPILFKEHSMGNITMGELKGSLYICDSSSSSHGHTRIKMWIMKKYGFGESWTK 399
F+ P P + N + LKG L C ++G ++ +W+MK YG ESW K
Sbjct: 271 EFKEIPKPDCGGLNRT--NHRLVNLKGCL--CAVVYGNYG--KLDIWVMKTYGVKESWGK 324
Query: 400 VLNIDTI-------RTDR--WPY-----GQYFPVKYFKNDAAILMFHSCYTLRHRFIYYE 445
+I T DR W + G+ V + IL+ + L + Y+
Sbjct: 325 EYSIGTYLPKGLKQNLDRPMWIWKNAENGKVVRVLCLLENGEILLEYKSRVL----VAYD 380
Query: 446 PEKNKFKKFKVLGIGTQSTFEVIPHIHNL 474
P+ KFK +L G + F + H L
Sbjct: 381 PKLGKFK--DLLFHGLPNWFHTVVHAGTL 407
>AT1G11620.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:3910833-3911924
FORWARD LENGTH=363
Length = 363
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 173/422 (40%), Gaps = 109/422 (25%)
Query: 65 DLPTHITTDILLRLPVKSILICKSVCTSWKALISDPHFAKSHFEHGPTGFTIRTRHWDGD 124
DL + + +IL R+P +S++ +S C W+ALI++P F H H +R R
Sbjct: 5 DLSSDLVEEILSRVPARSLVRLRSTCKQWEALIAEPRFVNKHLSH------MRYR----- 53
Query: 125 SRILHLIESEPEIFENDD-----YGQFC-YCKQDFIKPECNCHLKLERKLKLPLHGAKLV 178
E + +F N+ +G Y DF KPE NC +KL + L
Sbjct: 54 -------EQQFTVFNNEHIVSPLFGSTTSYVGIDFNKPE-NCGVKLPFPIAL-------- 97
Query: 179 LDKRDVNGKRGRQRNHISCKPEIDRFDVVNSCNGLLCLSDRDSDYIVVCNPVTGEFIRLP 238
P I+ ++ C+GLL + ++V NP+ +
Sbjct: 98 -------------------SPAIN----ISHCDGLLLYVTKS--MLLVANPLLSQ----- 127
Query: 239 EATTRIVKTRDMWLHEI---YMGFGFQPKTN--EYKVVRILKRFWGWQEKRNVVVEIHTL 293
R +K + + H + +G+ F + +YKVVR K + VE++
Sbjct: 128 ---KRWIKCSEGFDHSMDAYGLGYLFNQSSGFYDYKVVRFRCGI-----KNSSRVEVYAF 179
Query: 294 GASRWRNVGVDLDPRYLTFPRFP---TCVSGALHWFMK-------LSILCFNFESERFQS 343
+ W+ V +D + F P C+ G +W +SI F+F ERF+
Sbjct: 180 KSDSWKVV---VDTNFGGFDGLPLSSVCLRGTPYWLGYNKSGNELMSIQSFDFSKERFEP 236
Query: 344 FPSPPILFKEHSMGN-ITMGELKG---SLYICDSSSSSHGHTRIKMWIMKKYGFGESWTK 399
PP ++ I++G +G SL + H ++ +W+MKK + W++
Sbjct: 237 LFLPPQSIGSRNLVKYISLGIFRGDQLSLLL-----ECHETCKLHLWVMKK----QHWSR 287
Query: 400 VLNIDTIRTDRWPYGQYFPVKYFKNDAAILMFHSCYTLRHRFIYYEPEKNKFKKFKVL-G 458
++ +D + YG+YF +N L+ S R+ IY E +FK+F+ G
Sbjct: 288 LMTVDVPQDA--IYGKYFSSFIERNGRLALLIKS----RNISIYIGGENQEFKRFEYFTG 341
Query: 459 IG 460
+G
Sbjct: 342 LG 343
>AT3G21120.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:7406326-7407429
FORWARD LENGTH=367
Length = 367
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 117/294 (39%), Gaps = 66/294 (22%)
Query: 66 LPTHITTDILLRLPVKSILICKSVCTSWKALISDPHFAKSHFEHGPTGFTIRTRHWDGDS 125
LP + +IL ++P S+ +S C W AL+ D FAK H+ +GP + I
Sbjct: 3 LPEDLVLEILSKVPAVSLARFRSTCRRWNALVVDGSFAKKHYAYGPRQYPI--------- 53
Query: 126 RILHLIESEPEIFENDDYGQFCYCKQDFIKPECNCHLKLERKLKLPLHGAKLVLDKRDVN 185
++ LIE + D +G + P L + LK PL + +D R+
Sbjct: 54 -VIMLIEFRVYLVSIDLHG----INNNNGAPSAK--LTGQFSLKDPLSNSSEEVDIRNAF 106
Query: 186 GKRGRQRNHISCKPEIDRFDVVNSCNGLL--CLSDRDSDYIVVCNPVTGEFIRLPEATTR 243
C+GLL C DR +VV NP +GE T+
Sbjct: 107 -----------------------HCDGLLLCCTKDRR---LVVWNPCSGE--------TK 132
Query: 244 IVKTRDMWLHEIYMGFGFQPKTNEYKVVRILKRFWGWQEKRNVVVEIHTLGASRWRNVGV 303
++ R+ + G+ +++ YK++R+ ++ E++ + WR+VGV
Sbjct: 133 WIQPRNSYKESDLYALGYDNRSSSYKILRMHPV----GNPFHIESEVYDFASHSWRSVGV 188
Query: 304 DLDPRYLTFPRFPTCVSGALHWFM----------KLSILCFNFESERFQSFPSP 347
D T + V G +WF + +L F+F ERFQ P P
Sbjct: 189 TTDFHIQTNESYGMNVKGTTYWFALSKDWWSSDDRRFLLSFDFSRERFQCLPLP 242
>AT1G12855.1 | Symbols: | F-box family protein |
chr1:4382223-4383611 FORWARD LENGTH=462
Length = 462
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 136/360 (37%), Gaps = 66/360 (18%)
Query: 64 ADLPTHITTDILLRLPVKSILICKSVCTSWKALISDPHFAKSHFEHGPTGFTIRTRHWDG 123
+ LP + +I LRLPVK+I+ KS+ W++ I F + H
Sbjct: 69 SSLPNDVVEEIFLRLPVKAIIQLKSLSKQWRSTIESRSFEERH----------------- 111
Query: 124 DSRILHLIESE----PEIFENDDYGQFCYCKQDFIKPECNCHLKLERKLKLPLHGAKLVL 179
L ++E P++ + K + +P+ + + L A +L
Sbjct: 112 ----LKIVERSRVDFPQVMVMSEEYSLKGSKGNQPRPDTDIGFS-----TICLESAS-IL 161
Query: 180 DKRDVNGKRGRQRNHISCKPEIDRFDVVNSCNGLLCLSDRDSDYIVVCNPVTGEFIRLPE 239
+ +G Q R SC+GL C+ + I V NP T F +LP
Sbjct: 162 SSTLITFPQGFQH----------RIYASESCDGLFCIHSLKTQAIYVVNPATRWFRQLPP 211
Query: 240 ATTRIV-----KTRDMWLH----EIYMGFGFQPKTNEYKVVRILKRFWGWQEKRNVVVEI 290
A +I+ T+D W+ Y F K N+YK+V + E+
Sbjct: 212 ARFQILMQKLYPTQDTWIDIKPVVCYTAFV---KANDYKLVWLYNSDASNPNLGVTKCEV 268
Query: 291 HTLGASRWRNVGVDLDPRYLTFP-RFPTCVSGALHWFM-----KLSILCFNFESERFQSF 344
A+ WR + P Y FP + P +G+++WF ++ ++ + +E F+
Sbjct: 269 FDFRANAWRYLTC--TPSYRIFPDQVPAATNGSIYWFTEPYNGEIKVVALDIHTETFRVL 326
Query: 345 PSPPILFKEHSMGNITMGELKGSLYICDSSSSSHGHTRIKMWIMKKYGFGESWTKVLNID 404
P +I M L L C S S + ++W +K +SW KV ID
Sbjct: 327 PKINPAIASSDPDHIDMCTLDNGL--CMSKRESDTLVQ-EIWRLK--SSEDSWEKVYTID 381
>AT3G23880.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:8622061-8623155
REVERSE LENGTH=364
Length = 364
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 140/347 (40%), Gaps = 66/347 (19%)
Query: 65 DLPTHITTDILLRLPVKSILICKSVCTSWKALISDPHFAKSHFEHGPTGFTIRTRHWDGD 124
+LP + +ILLRLPVKS+ K VC+SW++LIS+ FA H
Sbjct: 13 NLPLEMMEEILLRLPVKSLTRFKCVCSSWRSLISETLFALKH------------------ 54
Query: 125 SRILHLIESEPEIFENDDYGQFCYCKQDFIKPECNCHLKLERKLKLPLHGAKLVLDKRDV 184
L L S+ YG + +K C L + + H +L+
Sbjct: 55 --ALILETSKATTSTKSPYGVITTSRY-HLKSCCIHSLYNASTVYVSEHDGELL------ 105
Query: 185 NGKRGRQRNHISCKPEIDRFDVVNSCNGLLCLSDRDSDYIVVCNPVTGEFIRLPEATTRI 244
GR D + VV +C+GL+C + + NP RL +
Sbjct: 106 ----GR-----------DYYQVVGTCHGLVCFHVDYDKSLYLWNPTIKLQQRLSSSD--- 147
Query: 245 VKTRDMWLHEIYMGFGFQPKTNEYKVVRILKRFWGWQEKRNVVVE--IHTLGASRWR-NV 301
++T D Y GFG+ ++YKVV +L Q++ V +E I++ WR N
Sbjct: 148 LETSDDECVVTY-GFGYDESEDDYKVVALL------QQRHQVKIETKIYSTRQKLWRSNT 200
Query: 302 GVDLDPRYLTFPRFPTCVSGALHWFMKLSILC-----FNFESERFQSFPSPPILFKEHSM 356
R ++G L+W S ++ + F+ P P +
Sbjct: 201 SFPSGVVVADKSRSGIYINGTLNWAATSSSSSWTIISYDMSRDEFKELPGPVCCGR--GC 258
Query: 357 GNITMGELKGSLYICDSSSSSHGHTRIKMWIMKKYGFGESWTKVLNI 403
+T+G+L+G L + ++ +W+MK++G SW+K+L+I
Sbjct: 259 FTMTLGDLRGCLSMVCYCKGANA----DVWVMKEFGEVYSWSKLLSI 301
>AT2G43260.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr2:17983744-17985089
REVERSE LENGTH=420
Length = 420
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 114/288 (39%), Gaps = 49/288 (17%)
Query: 209 SCNGLLCLSDRDSDYIVVCNPVTGEFIRLPEATTRIVKTR-DMW----LHEIYMGFGFQP 263
+C G++C ++D +I+V NP T + R P + R +W MGFG
Sbjct: 102 TCQGVICFPEQD--WIIVLNPSTSQLRRFPSGLNHNCRFRIGLWKTFSPGNWVMGFGRDK 159
Query: 264 KTNEYKVVRILKRFWGWQEKRNVV-VEIHTLGASRWRNVGVDLDPRYLTFPRFPTCVSGA 322
YKVVR+ FW +++ VV + + WR + P + CV+G+
Sbjct: 160 VNGRYKVVRMSFAFWRVRQEEPVVECGVLDVDTGEWRKLSP--PPYVVNVGSKSVCVNGS 217
Query: 323 LHWF---MKLSILCFNFESERFQSFPSPPILFKEHSMGNITMGELKGSLYICDSSSSSHG 379
++W IL + E F P PP + M L+ L + + S
Sbjct: 218 IYWLHIQTVYRILALDLHKEEFHKVPVPPT----QITVDTQMVNLEDRLVLAITRVSPE- 272
Query: 380 HTRIKMWIMKKYG---FGESWTKVLNIDTI-------RTDRWPYGQYFPVKYFKNDAAIL 429
WI++ +G + E W+K +I R RW + PV K A L
Sbjct: 273 ------WILEVWGMDTYKEKWSKTYSISLDHRVVSWRRQKRW----FTPVAVSKQ--ANL 320
Query: 430 MFHSCYTLRHRFIYYEPEKNKFKKFKVLGIGTQSTFEVIPHIHNLISL 477
+F Y + R Y P K++ + L I S P++ NL+ L
Sbjct: 321 VF---YDNKKRLFKYYPVKDEIRCLS-LDICVLS-----PYVENLVPL 359
>AT3G17490.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:5984827-5985993
FORWARD LENGTH=388
Length = 388
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 157/393 (39%), Gaps = 89/393 (22%)
Query: 66 LPTHITTDILLRLPVKSILICKSVCTSWKALISDPHFAKSHFEHGPT---GFTIRTRHWD 122
L + +IL R+P S+ + C W AL +D F+K H + P G T++
Sbjct: 6 LSEDLVEEILSRVPAISLKRLRYTCKQWNALFNDQRFSKKHRDKAPKTYLGLTLK----- 60
Query: 123 GDSRILHLIESEPEIFENDDYGQFCYCKQDFIKPECNCHLKLERKLKLPLHGAKLVLDKR 182
D RI + + + N+ N L +E K KL
Sbjct: 61 -DFRIYSMSSNLHGLLHNN-----------------NIDLLMEFKGKL------------ 90
Query: 183 DVNGKRGRQRNHISCKPEIDRFDV--VNSCNGLLCLSDRDSDYIVVCNPVTGEFIRLPEA 240
S +++ F++ + C+GL+ S + + +VV NP TG+
Sbjct: 91 -------------SSLNDLNDFEISQIYPCDGLILCSTKRNTRLVVWNPCTGQ------- 130
Query: 241 TTRIVKTRDMWLHEIYMGFGFQPKT----NEYKVVRILKRFWGWQEKRNVVVEIHTLGAS 296
TR +K R+ + + + FG+ N YK++R+ ++ G Q + EI ++
Sbjct: 131 -TRWIKRRNRRMCDTF-AFGYDNSKSSCLNNYKILRVCEKIKGQQFE----YEIFEFSSN 184
Query: 297 RWRNVGVDLDPRYLTFPRFPTCVSGALHWFMKLS-----ILCFNFESERFQSFPSPPILF 351
WR +D++P + R V G +WF ++ I F+F SE FQ P P +F
Sbjct: 185 SWR--VLDVNPNCIIEGR-SVSVKGNSYWFATITKTHYFIRRFDFSSETFQKLPLPFHIF 241
Query: 352 KEHSMGNITMGELKGSLYICDSSSSSHGHTRIKMWIMKKYGFGE--SWTKVLNIDTIRTD 409
+++ + L + S + ++ +W+ K SW+K + I
Sbjct: 242 -DYNDSRALSAFREEQLSVLHQSFDTE---KMDIWVTNKIDETTDWSWSKFFTVRLINRL 297
Query: 410 RWPYGQYF--PVKYFKNDAAILMFHSCYTLRHR 440
+P P+ +F ++ ++ CY +HR
Sbjct: 298 DYPISMMMKSPLSFFIDEKKNIIL--CYD-KHR 327
>AT1G33530.1 | Symbols: | F-box family protein |
chr1:12159884-12161314 FORWARD LENGTH=441
Length = 441
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 29/206 (14%)
Query: 202 DRFDVVNSCNGLLCLSDRDSDYIVVCNPVTGEFIRLPEATTRIVKTRDMWLHEIYMGFGF 261
D V SCNGL+C+ + DS YI + NP+TG T + R ++ +GFG
Sbjct: 182 DLLRVPGSCNGLVCVYELDSVYIYLLNPMTG-------VTRTLTPPRGT---KLSVGFGI 231
Query: 262 QPKTNEYKVVRILKRFWGWQEKRNVVVEIHTLGASRWRNVGVDLDPRYL----TFPRFPT 317
T YKV+ + +G+ VV ++ T ++WR P L T R P
Sbjct: 232 DVVTGTYKVMVL----YGFDRVGTVVFDLDT---NKWRQRYKTAGPMPLSCIPTPERNPV 284
Query: 318 CVSGALHWFMK---LSILCFNFESERFQSFPSPPILFK-EHSMGNITMGELKGSLYICDS 373
V+G+L W + IL + +E+F++ P + + S G I M L+ L + +
Sbjct: 285 FVNGSLFWLLASDFSEILVMDLHTEKFRTLSQPNDMDDVDVSSGYIYMWSLEDRLCVSNV 344
Query: 374 SSSSHGHTRIKMWIMKKYGFGESWTK 399
H + +W++ + E W +
Sbjct: 345 RQGLHSY----VWVLVQDELSEKWER 366
>AT5G47300.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr5:19198125-19199375
FORWARD LENGTH=416
Length = 416
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 138/354 (38%), Gaps = 78/354 (22%)
Query: 63 FADLPTHITTDILLRLPVKSILICKSVCTSWKALISDPHFAKSHFEHGPTGFTIRTRHWD 122
+DLP + +IL R+P S+ +S C W L ++ F + H + P F
Sbjct: 43 LSDLPGDLLEEILCRVPATSLKQLRSTCKQWNNLFNNGRFTRKHLDKAPKDFQ------- 95
Query: 123 GDSRILHLIESEPEIFENDDYGQFCYCKQDFIKPECNCHLKLERKLKLPLHGAKLVLDKR 182
+L+ S+ +F E C L L +D
Sbjct: 96 ------NLMLSDSRVF------SMSVSFHGIPSVEATCELSL--------------ID-- 127
Query: 183 DVNGKRGRQRNHISCKPEIDRFDV--VNSCNGLLCLSDRDSDYIVVCNPVTGEFIRLPEA 240
S D+F++ V C+GLL +D D+ IVV NP TG+
Sbjct: 128 -------------SFSSFEDKFEISQVFHCDGLLLCTDADNTRIVVWNPCTGK------- 167
Query: 241 TTRIVKTRDMWLHEIYMGFGFQPKTNEYKVVRILKRFWGWQEKRNVVVEIHTLGASRWRN 300
TR ++ + + + + + N YK++ +G++ + + EI+ + WR
Sbjct: 168 -TRWIEPNNRCYYYAFGSYLDKSYGNSYKILSYSG--YGYENQELAIYEIN---SQSWRF 221
Query: 301 VGVDLDPRYLTFPRFPTCVSGALHWF--------MKLSILCFNFESERFQSFPSPPILFK 352
+ V D + + + G +WF + + ++ F++ +ERF+ P
Sbjct: 222 LDVTRDCILERYTDYGVSLKGHTYWFASDEKEKNLSVFLVSFDYTTERFRRLRLPYQCPD 281
Query: 353 EHSMGNITMGELKGSLYICDSSSSSHGHTRIKMWIMKKYGFGE--SWTKVLNID 404
++ + E K ++ + ++S R ++W+ + G + SW+ VL +D
Sbjct: 282 YNTASLSVVREEKLAVLLQRENTS-----RTEIWVTSRIGETKVVSWSMVLAVD 330
>AT1G53550.1 | Symbols: | F-box family protein |
chr1:19983411-19984637 FORWARD LENGTH=408
Length = 408
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 161/400 (40%), Gaps = 81/400 (20%)
Query: 63 FADLPTHITTDILLRLPVKSILICKSVCTSWKALISDPHFAKSHFEHGPTGFTIRTRHWD 122
F +P + +IL RL ++ I C+ V W ++I P++ + F +++
Sbjct: 32 FDPIPVDLVINILSRLSLECIARCRCVSKLWSSIIRRPNYNQL--------FPVKS---S 80
Query: 123 GDSRILHLIESEPEIFENDDYGQFCYCKQDFIKPECNCHLKLERKLKLPLHGAKLVLDKR 182
R+L + + E+F N F P + + + +
Sbjct: 81 ATPRLLFVFKVARELFFNSSPQHFN-----------------------PNNSSLVATSLQ 117
Query: 183 DVNGKRGRQRNHISCKPEIDRFDVVNSCNGLLCLSDRDSDYI--VVCNPVTGEFIRLPEA 240
+ R Q C+P +GL+C + +Y+ ++ NP TGE+I LP+
Sbjct: 118 KTSSTRFSQL----CRP----------VHGLICSQHIEENYLFALISNPTTGEYIALPKQ 163
Query: 241 TTRIVKTRDMWLHEIYMGFGFQPKTNEYKVVRILKRFWG---WQEKRNVVVEIHTLGASR 297
+ + + + ++ FG+ P ++KV+RI G W + V+ G
Sbjct: 164 RMEEMNSETI-IEKVRYSFGYDPIDKQFKVLRITWLHRGSHEWSSEYQVLT--LGFGNIS 220
Query: 298 WRNVGVDLDPRYLTFPRFPTCVSGALHWFMKL-----SILCFNFESERFQSFPSPPILFK 352
WRN + YL C++G L++ +L +I+CF+ +E+F SF S
Sbjct: 221 WRNTQCCV-VHYL-LEDSGICINGVLYYPARLDNRKYTIVCFDVMTEKF-SFTSIDKDMT 277
Query: 353 EHSMGNITMGELKGSL--YICDSSSSSHGHTRIKMWIMKKYGFGESWTK-VLNIDTIRTD 409
+ + ++ + KG L ICD HT ++W+++ W+K + N+ R+
Sbjct: 278 IMTNLSFSLIDYKGKLGACICD-------HTLFELWVLEN-AEEHKWSKNIYNMPYSRS- 328
Query: 410 RWPYGQYFPVKYFKNDAAILMF-----HSCYTLRHRFIYY 444
R Y IL++ ++ R+ FIYY
Sbjct: 329 RLEETSYLKCAGMIASGEILLYPISSANTSTDARYPFIYY 368
>AT3G23260.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:8313334-8314422
FORWARD LENGTH=362
Length = 362
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 143/368 (38%), Gaps = 80/368 (21%)
Query: 66 LPTHITTDILLRLPVKSILICKSVCTSWKALISDPHFAKSHFEHGPTGFTIRTRHWDGDS 125
LP + +IL R+P K + +S W AL FAK H + +
Sbjct: 6 LPVELQEEILSRVPAKYLARLRSTSKQWNALSKTGSFAKKHSANATK-----------EP 54
Query: 126 RILHLIESEPEIFENDDYGQFCYCKQDFIKPECNCHLKLERKLKLPLHGAKLVLDKRDVN 185
I+ L +S + + +G H + + +L G++L L
Sbjct: 55 LIIMLKDSRVYLASVNLHG---------------VHNNVAQSFEL---GSRLYL------ 90
Query: 186 GKRGRQRNHISCKPEIDRFDVVNSCNGLLCLSDRDSDYIVVCNPVTGEFIRLPEATTRIV 245
+ HIS V C+GLL L + + V NP +GE +++
Sbjct: 91 -----KDPHISN---------VFHCDGLLLLCSIKENTLEVWNPCSGE--------AKLI 128
Query: 246 KTRDMWLHEI-YMGFGFQPKTN--EYKVVRILKRFWGWQEKRNVVVEIHTLGASRWRNVG 302
K R + E + G+ K++ +YKV+R++ + Q + EI+ WR G
Sbjct: 129 KPRHSYYKESDFYALGYDNKSSCKKYKVLRVISQV-HVQGDFKIEYEIYDFTNDSWRVHG 187
Query: 303 V--DLDPRYLTFPRFPTCVSGALHWFMK------LSILCFNFESERFQSFPSP-PILFKE 353
+L R + P V G+ +W ++ L F+F +ERFQS P P +
Sbjct: 188 ATTELSIR----QKHPVSVKGSTYWVVRNRYFPYKYFLSFDFSTERFQSLSLPQPFPYLV 243
Query: 354 HSMGNITMGELKGSLYICDSSSSSHGHTRIKMWIMKKYGFGESWTKVLNIDTI--RTDRW 411
+ + +L Y S++S + +W+ G SW+K L I I R D +
Sbjct: 244 TDLSVVREEQLCLFGYYNWSTTSED----LNVWVTTSLGSVVSWSKFLTIQIIKPRVDMF 299
Query: 412 PYGQYFPV 419
YG F V
Sbjct: 300 DYGMSFLV 307
>AT5G15660.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr5:5095652-5097041
FORWARD LENGTH=438
Length = 438
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 134/305 (43%), Gaps = 39/305 (12%)
Query: 210 CNGLLCLSDRDSDYIVVCNPVTGEFIRLPEATTRIVKTRDMWLHEIYMGFGFQPKTNEYK 269
NGL+ + +D IV+ NP TG+FI LP TR R + + FG+ +++YK
Sbjct: 126 VNGLISVG-YGTDQIVI-NPTTGKFITLPRPKTR----RKL----VISFFGYDSVSDQYK 175
Query: 270 VVRILKRFWGWQEKRNVVVEIHTLGASR--WRNVGVDLDPRYLTFPRFPTCVSGALHWFM 327
V+ + +R G E+ + +++TLGA + W+ + + R ++ C++G +++
Sbjct: 176 VLCMTERLRGHPEEASSQHQVYTLGAKQKSWKMINCSIPHRPWSWN--AVCINGVVYYIA 233
Query: 328 KLS-------ILCFNFESERFQSFPSPPILFKEHSMGNITMGELKGSLYICDSSSSSHGH 380
K ++ F+ +S+ P + S+ + + KG + I + +
Sbjct: 234 KTGEGMFRRCLMRFDLKSDNLDLCTILPEEIQT-SLHDYFLINYKGKVAIPNQPN----F 288
Query: 381 TRIKMWIMKKYGFGESWTKVLNIDTIRTDRWPYGQYFPVKYFKNDAAILMFHSCYTLRHR 440
+W+M + G W K NI R + +Y V + ++ + YT
Sbjct: 289 YTYDVWVMNQEGGKIEWLK--NITFTIKPRKGFVRYLFVTGTTHTGEFILAPTSYTDEFY 346
Query: 441 FIYYEPEKNKFKKFKVLGIGTQSTF----EVIPHIHNLISLKDAVNSDNIKVM-NVHARS 495
+Y P+ N F+K +V G + +F V+ H+L+ L DN+ + + H +
Sbjct: 347 VFHYNPDMNSFRKIRVQAPGVKFSFAQKASVVFSDHSLLRL------DNLHIRGSTHTAT 400
Query: 496 AELKL 500
E L
Sbjct: 401 GEFIL 405
>AT5G50220.1 | Symbols: | F-box family protein |
chr5:20446068-20447200 REVERSE LENGTH=357
Length = 357
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 100/242 (41%), Gaps = 39/242 (16%)
Query: 225 VVCNPVTGEFIRLPEATTRIVKTRDMWLHEIYMGFGFQPKTNEYKVVRILKRFWGWQEKR 284
+ NP T + + LPE T +L G+ P N+YKV+ + +
Sbjct: 123 AIYNPTTRQSLSLPETTAGHSHVSTSFL-------GYDPFKNQYKVICL-------DNYK 168
Query: 285 NVVVEIHTLGAS--RWRNVGVDLDPRYLTFPRFPTCVSGALHWFMK-----LSILCFNFE 337
+ TLG + +WR + + + P P C+ G +++ K +LCF+
Sbjct: 169 RRCCHVFTLGDAIRKWRKIQYNFGLYFPLLP--PVCIKGTIYYQAKQYGSTYVLLCFDVI 226
Query: 338 SERFQSFPSPPILFKEHSMGNITMGELKGSL-YICDSSSSSHGHTRIKMWIMKKYGFGES 396
SE+F +P + T+ +G L ++C R+++W+MK +
Sbjct: 227 SEKFDQVEAPKTMMDHR----YTLINYQGKLGFMC-------CQNRVEIWVMKNDEKKQE 275
Query: 397 WTKVLNIDTIRTDRWPYGQYFPVKYFKNDAAILMFHSCYTLRHRFIYYEPEKNKFKKFKV 456
W+K+ + ++W + P +L+ SC TL YY P++N ++ +V
Sbjct: 276 WSKIFFYEMAGFEKWHIARATPSGEIVFVNRLLL--SCQTL--YVYYYGPKRNSMRRVEV 331
Query: 457 LG 458
G
Sbjct: 332 EG 333
>AT1G26515.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:9161810-9162910
REVERSE LENGTH=366
Length = 366
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 25/190 (13%)
Query: 225 VVCNPVTGEFIRLPEATT--RIVKTRDMWLHEIYMGFGFQPKTNEYKVVRILKRFWGWQE 282
+V NP TG FI LP T R+VK+ FG+ P +++YKV+ + +R +G QE
Sbjct: 147 IVTNPSTGRFITLPSVRTKRRLVKS----------FFGYDPASDQYKVLCMTERLYGHQE 196
Query: 283 KRNVVVEIHTLGASR-WRNVGVDLDPRYLTFPRFPTCVSGALHWFMK-------LSILCF 334
+ ++ TLG + W+ + P + + C+ G +++ K LS++ +
Sbjct: 197 DPSSQHQVFTLGVKKPWKMLDRTTIPDHRPWTN-GVCIDGVVYYIAKTGQGMSQLSLMRY 255
Query: 335 NFESERFQSFPSPPILFKEHSMGNITMGELKGSLYICDSSSSSHGHTRIKMWIMKKYGFG 394
+ + F S P + S+ + T+ +G L I +S +W+M + G
Sbjct: 256 DLRDDNLNVFISLPEEIRTPSLYSDTLLNYEGKLAIAIPVTS----YIFDVWVMDQDGEK 311
Query: 395 ESWTKVLNID 404
W K + +
Sbjct: 312 HEWLKKITFN 321
>AT4G12560.2 | Symbols: CPR30 | F-box and associated interaction
domains-containing protein | chr4:7441815-7443157
FORWARD LENGTH=413
Length = 413
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/285 (19%), Positives = 123/285 (43%), Gaps = 32/285 (11%)
Query: 205 DVVNSCNGLLCLSDRDSDYIVVCNPVTGEFIRLPEATTRIVKTRDMWLHEIYMGFGFQPK 264
+V S NGL+ LS+ +D + V NP T + RLP ++ + + ++ G G+
Sbjct: 90 EVFGSSNGLIGLSNSPTD-LAVFNPSTRQIHRLPPSSIDLPDGSSTRGY-VFYGLGYDSV 147
Query: 265 TNEYKVVRILKRFWGWQEKRNVV----VEIHTLGASRWRNVGVDLDPRYLTF-------- 312
+++YKVVR+++ +++ V++ +L + W+ + L F
Sbjct: 148 SDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWKRIESVASSIQLLFYFYYHLLY 207
Query: 313 -PRFPTCVSGALHWFMKLS--------ILCFNFESERFQSFPSPPILFKEHSMGNITMGE 363
+ +LHW + I+ F+ E F+ P + + GN+ +
Sbjct: 208 RRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAV----ANGNVDIQM 263
Query: 364 LKGSLYICDSSSSSHGHTRIKMWIMKKYGFGESWTKVLNIDTIRTDRWPYGQYFPVKYFK 423
G L C ++ + + +W+MK+Y +SWTKV + ++ + + P+ Y K
Sbjct: 264 DIGVLDGCLCLMCNYDQSYVDVWMMKEYNVRDSWTKVFTVQKPKSVK-SFSYMRPLVYSK 322
Query: 424 NDAAILMFHSCYTLRHRFIYYEPEKNKFKKFKVLGIGTQSTFEVI 468
+ +L+ + + ++++ E K ++ + + E++
Sbjct: 323 DKKKVLLELN----NTKLVWFDLESKKMSTLRIKDCPSSYSAELV 363
>AT4G12560.1 | Symbols: CPR30 | F-box and associated interaction
domains-containing protein | chr4:7441815-7443157
FORWARD LENGTH=413
Length = 413
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/285 (19%), Positives = 123/285 (43%), Gaps = 32/285 (11%)
Query: 205 DVVNSCNGLLCLSDRDSDYIVVCNPVTGEFIRLPEATTRIVKTRDMWLHEIYMGFGFQPK 264
+V S NGL+ LS+ +D + V NP T + RLP ++ + + ++ G G+
Sbjct: 90 EVFGSSNGLIGLSNSPTD-LAVFNPSTRQIHRLPPSSIDLPDGSSTRGY-VFYGLGYDSV 147
Query: 265 TNEYKVVRILKRFWGWQEKRNVV----VEIHTLGASRWRNVGVDLDPRYLTF-------- 312
+++YKVVR+++ +++ V++ +L + W+ + L F
Sbjct: 148 SDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWKRIESVASSIQLLFYFYYHLLY 207
Query: 313 -PRFPTCVSGALHWFMKLS--------ILCFNFESERFQSFPSPPILFKEHSMGNITMGE 363
+ +LHW + I+ F+ E F+ P + + GN+ +
Sbjct: 208 RRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAV----ANGNVDIQM 263
Query: 364 LKGSLYICDSSSSSHGHTRIKMWIMKKYGFGESWTKVLNIDTIRTDRWPYGQYFPVKYFK 423
G L C ++ + + +W+MK+Y +SWTKV + ++ + + P+ Y K
Sbjct: 264 DIGVLDGCLCLMCNYDQSYVDVWMMKEYNVRDSWTKVFTVQKPKSVK-SFSYMRPLVYSK 322
Query: 424 NDAAILMFHSCYTLRHRFIYYEPEKNKFKKFKVLGIGTQSTFEVI 468
+ +L+ + + ++++ E K ++ + + E++
Sbjct: 323 DKKKVLLELN----NTKLVWFDLESKKMSTLRIKDCPSSYSAELV 363
>AT1G49790.2 | Symbols: | F-box associated ubiquitination effector
family protein | chr1:18435351-18437068 REVERSE
LENGTH=306
Length = 306
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 26/203 (12%)
Query: 209 SCNGLLCLSDRDSDYIVVCNPVTGEFIRLPEA-TTRIVKTR-------DMWLHEIYMGFG 260
SC+GL+C+ +I V NP TGEF+R R++ D++ MGFG
Sbjct: 50 SCDGLVCIPI--PGWINVLNPSTGEFLRFSSGRDPRLINDFECVDSKFDVFPGFWTMGFG 107
Query: 261 FQPKTNEYKVVRIL--KRFWGWQEKRNVVVEIHTLGASRWRNVGVDLDPRYLTFPRFPTC 318
YK+VR+L + F N +I + WR P ++ + C
Sbjct: 108 RDNVNGSYKIVRMLFDRHF------ENRYCQILDVNIGEWRKQ--RQPPYFVGYREKSAC 159
Query: 319 VSGALHW---FMKLSILCFNFESERFQSFPSPPILFKEHSMGNITMGELKGSLYICDSSS 375
V+G+++W ++ +L F+ SE F+ P+PP E + + L+ L + + +
Sbjct: 160 VNGSIYWSQALIRCKLLAFDLYSEEFRDVPTPP--RSEICERSCQIVNLEDRLVLAVTYT 217
Query: 376 SSHGHTRIKMWIMKKYGFGESWT 398
+S H +K+W M + S T
Sbjct: 218 TSL-HWNVKIWSMDAHDGTRSIT 239
>AT1G49790.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr1:18436137-18437068 REVERSE
LENGTH=283
Length = 283
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 22/201 (10%)
Query: 209 SCNGLLCLSDRDSDYIVVCNPVTGEFIRLPEA-TTRIVKTR-------DMWLHEIYMGFG 260
SC+GL+C+ +I V NP TGEF+R R++ D++ MGFG
Sbjct: 50 SCDGLVCIPI--PGWINVLNPSTGEFLRFSSGRDPRLINDFECVDSKFDVFPGFWTMGFG 107
Query: 261 FQPKTNEYKVVRILKRFWGWQEKRNVVVEIHTLGASRWRNVGVDLDPRYLTFPRFPTCVS 320
YK+VR+L + N +I + WR P ++ + CV+
Sbjct: 108 RDNVNGSYKIVRMLFD----RHFENRYCQILDVNIGEWRKQ--RQPPYFVGYREKSACVN 161
Query: 321 GALHW---FMKLSILCFNFESERFQSFPSPPILFKEHSMGNITMGELKGSLYICDSSSSS 377
G+++W ++ +L F+ SE F+ P+PP E + + L+ L + + ++S
Sbjct: 162 GSIYWSQALIRCKLLAFDLYSEEFRDVPTPPR--SEICERSCQIVNLEDRLVLAVTYTTS 219
Query: 378 HGHTRIKMWIMKKYGFGESWT 398
H +K+W M + S T
Sbjct: 220 L-HWNVKIWSMDAHDGTRSIT 239
>AT1G53360.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr1:19907517-19908548 FORWARD
LENGTH=343
Length = 343
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 31/188 (16%)
Query: 225 VVCNPVTGEFIRLPEATTRIVKTRDMWLHEIYMGFGFQPKTNEYKVVRILKRFWGWQEKR 284
V+CNPV+G++I LP K + + E Y FGF P T ++KV+ + +G
Sbjct: 103 VICNPVSGDYITLP-------KVKATGVGESY--FGFDPITKQFKVLCMTWSRYGTPNTH 153
Query: 285 NVVVEIHTLGASRWRNVGVDLDPRYLTFPRFPTCVSGALHWFMKLS------ILCFNFES 338
V+ + T G WR + + P Y +F R C++G L++ I+CF+F
Sbjct: 154 QVLT-LET-GKRLWRTIQDPILPHYRSFDRI--CINGVLYYGADFEESQSSKIVCFDFRF 209
Query: 339 ERFQSFPSPPILFKEHSMGNITMGELKGSLYICDSSSSSHGHTR---IKMWIMKKYGFGE 395
E+F F + + G K +L+ +H ++R + +W+++
Sbjct: 210 EKFS--------FINIADEGMFRGSYKWTLFNYKGKLGAHQYSRNGELVLWVLED-AENH 260
Query: 396 SWTKVLNI 403
W+K + I
Sbjct: 261 KWSKSICI 268
>AT2G30380.1 | Symbols: | Plant protein of unknown function
(DUF641) | chr2:12948284-12950573 FORWARD LENGTH=519
Length = 519
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 41/201 (20%)
Query: 223 YIVVCNPVTGEFIRLPEATTRIVKTR---------DMWLHEI----YMGFGFQPKTNEYK 269
++ V NP TGEF+R P + +R WL MGFG YK
Sbjct: 325 WVNVLNPCTGEFLRFPSGPNPVDTSRYDNHRVIEGASWLAYYPGYWAMGFGKDKVNGTYK 384
Query: 270 VVRILKRFWGWQEKRNVVVEIHTLGASRWRNVGVDLDPRYLTFPRFPTCVSGALHWFMKL 329
+VR+ F+ + EI L WR + L P Y+ V+G+++W+ +
Sbjct: 385 IVRM---FYDTNQ-----FEILDLTIGEWRTMPNPL-PYYVQPNHHSAFVNGSIYWYDLV 435
Query: 330 S---ILCFNFESERFQSFPSPPILFKEHSMGNITMGELKG----SLYICDSSSSSHGHTR 382
+ IL + +E+F+ P P G+ T+ L ICD S H +
Sbjct: 436 TGYKILALDLHTEQFRDVPRP--------HGSPTLAPLANLEDRLAMICDYEPSHHW--K 485
Query: 383 IKMWIMKKYGFGESWTKVLNI 403
+ +W M E+WTK L +
Sbjct: 486 VAIWTMDTQ--EETWTKSLKL 504
>AT1G33020.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:11962746-11964832
FORWARD LENGTH=548
Length = 548
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 158/411 (38%), Gaps = 91/411 (22%)
Query: 66 LPTHITTDILLRLPVKSILICKSVCTSWKALISDPHFAKSHF----EHGPTGFTI-RTRH 120
+PT + +I R+ KSI C+ V WK+++ P+F + +H F + R R
Sbjct: 10 IPTDLILEIFSRMSTKSIGRCRCVSKLWKSMLGHPYFTELFLTRSSDHPRLLFGVKRERQ 69
Query: 121 WDGDSRILHLIESEPE-IFENDDYGQFCYCKQDFIKPECNCHLKLERKLKLPLHGAKLVL 179
W L +P+ ++E F DF H+ +
Sbjct: 70 W------LFFSSPQPQDLYEKSSLVDFHMNFSDF-------HMNFSGDI----------- 105
Query: 180 DKRDVNGKRGRQRNHISCKPEIDRFDVVNSCNGLLCLSDRDSDYIVVCNPVTGEFIRLPE 239
R + ++S R + N LC D+ V+CNP+TG++ L
Sbjct: 106 --------RRNECTYVSGFIYFPRKRIKN----YLC------DFRVICNPITGQYAILQL 147
Query: 240 ATTRIVKTRDMWLHEIYMGFGFQPKTNEYKVVRILKRFWGWQEKRNVVVEIHTL--GASR 297
T HE GF P ++KV+R+ + ++ VV I TL G R
Sbjct: 148 IT----------FHEKRSFLGFDPIDKQFKVLRM-----KYNDRGIVVHHILTLEPGKMR 192
Query: 298 WRNVGVDL--DPRYLTFPRFPTCVSGALHWFMKLS------ILCFNFESERFQSFPSPPI 349
WR + L +P + C +G L++ + + I CF+ SE+F+ +
Sbjct: 193 WRKIRCPLAHEPFWEEI-----CANGVLYYLAEPTDGGSYVICCFDVRSEKFKFIDAK-- 245
Query: 350 LFKEHSMGNITM-GELKGSLYICDSSSSSHGHTRIKMWIMKKYGFGESWTKVLNIDTIRT 408
F + S+ I G+L G + D+ + MW+++ + W+K +
Sbjct: 246 CFGDFSIQLINYKGKLGGISWKYDTVDGKRT-VELYMWVLEDVE-KQKWSKYVY------ 297
Query: 409 DRWPYGQYFPVKYFKNDAAILMFHSCYTLRHRFIYY-EPEKNKFKKFKVLG 458
P Y ++F YT + +++Y PEK F++ ++ G
Sbjct: 298 -PLPGNSYHYSVAGVTAKGDIVFVKTYTSKPFYVFYVNPEKKTFQRVEIHG 347
>AT2G32470.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr2:13787593-13788459 FORWARD
LENGTH=288
Length = 288
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 84/184 (45%), Gaps = 23/184 (12%)
Query: 211 NGLLCLSDRDSDYIVVCNPVTGEFIRLPEATTRIVKTRDMWLHEIYMGFGFQPKTNEYKV 270
NG +C + S I VCNP T + ++LP+ V T + ++H + G+ P ++YKV
Sbjct: 16 NGFVCCTRGSS--IAVCNPTTRQIVKLPD-----VVTNENYMH---VRLGYDPVEDQYKV 65
Query: 271 VRILKRFWGWQEKRNVVVEIHTLGASR--WRNVGVDLDPRYLTFPRFPTCVSGALHWFMK 328
+ ++ F G++ + + TL + + WR + Y C+ GA+++ +
Sbjct: 66 LLVVMMFDGYRTDTDQEYFVFTLSSQQKEWRKIENTTGETY-HMVYGGICIDGAIYYGVS 124
Query: 329 LSILC-FNFESERFQSFPSPPILFKEHSMGNITMGELKGSLYICDS--SSSSHGHTRIKM 385
SI+ F+ SE+ + + H + +I LY+ +H + ++
Sbjct: 125 QSIIVKFDVRSEKME-------FIQAHEVSHIAPPYYSTLLYLSSDMIRMENHSNEEVRF 177
Query: 386 WIMK 389
WI++
Sbjct: 178 WILE 181
>AT4G22390.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr4:11813757-11815074 REVERSE
LENGTH=402
Length = 402
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 100/219 (45%), Gaps = 29/219 (13%)
Query: 205 DVVNSCNGLLCLSDRDSDYIVVCNPVTGEFIRLPEATTRIVKTRDMWLHEIYMGFGFQPK 264
+V S NG++ L + D + + NP T + RLP + RD+ ++ G G+
Sbjct: 90 EVFGSFNGVIGLCNSPVD-LAIFNPSTRKIHRLPIEPIDFPE-RDITREYVFYGLGYDSV 147
Query: 265 TNEYKVVRILKRFWGWQEKR---NVVVEIHTLGASRWRNVGVDLDPR-------YLTFPR 314
+++KVVRI++ +K+ V V++ +L + W+ V + + + Y PR
Sbjct: 148 GDDFKVVRIVQCKLKEGKKKFPCPVEVKVFSLKKNSWKRVCLMFEFQILWISYYYHLLPR 207
Query: 315 --FPTCVSGALHWFM--KLSILCFN------FESERFQSFPSPPILFKEHSMGNITMGEL 364
+ V+ LHW + + ++ FN S+ P L+ E N+ +G L
Sbjct: 208 RGYGVVVNNHLHWILPRRQGVIAFNAIIKYDLASDDIGVLSFPQELYIED---NMDIGVL 264
Query: 365 KGSLYICDSSSSSHGHTRIKMWIMKKYGFGESWTKVLNI 403
G + + SH + +W++K+Y +SWTK+ +
Sbjct: 265 DGCVCLMCYDEYSH----VDVWVLKEYEDYKSWTKLYRV 299
>AT5G10340.1 | Symbols: | F-box family protein |
chr5:3253122-3255045 FORWARD LENGTH=445
Length = 445
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 99/290 (34%), Gaps = 52/290 (17%)
Query: 74 ILLRLPVKSILICKSVCTSWKALISDPHFAKSHFEHGPTGFTIRTRHWDGDSRILHLIES 133
I++RL VK++L KSV W + I P F + H GD +L +
Sbjct: 78 IMVRLDVKTLLKFKSVSKQWMSTIQSPSFQERQLIH-------HLSQSSGDPHVLLVSLY 130
Query: 134 EPEIFENDDYGQFCYCKQDFIKPECNCHLKLERKLKLPLHGAKLVLDKRDVNGKRGRQRN 193
+P C +QD P + L R +
Sbjct: 131 DP-----------CARQQD---PSISSFEAL-----------------RTFLVESSAASV 159
Query: 194 HISCKPEIDRFDVVN-SCNGLLCLSDRDSDYIVVCNPVTGEFIRLPEATTRIVKTRDMWL 252
I E + V N SC+GL+CL +V NP T P+ ++V
Sbjct: 160 QIPTPWEDKLYFVCNTSCDGLICLFSFYELPSIVVNPTTRWHRTFPKCNYQLVAADKGER 219
Query: 253 HEIYM------GFGFQPKTNEYKVVRILKRFWGWQEKRNVVVEIHTLGASRWRNVGVDLD 306
HE + GFG + YK V + + E+ + WR V
Sbjct: 220 HECFKVACPTPGFGKDKISGTYKPVWLYNSAELDLNDKPTTCEVFDFATNAWRYV-FPAS 278
Query: 307 PRYLTFPRFPTCVSGALHWFMKLS------ILCFNFESERFQSFPSPPIL 350
P + + P V G+LHWF LS +L + SE FQ P L
Sbjct: 279 PHLILHTQDPVYVDGSLHWFTALSHEGETMVLSLDLHSETFQVISKAPFL 328
>AT2G27520.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr2:11762061-11763104
FORWARD LENGTH=347
Length = 347
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 26/147 (17%)
Query: 210 CNGLLCLSDRDSDY--IVVCNPVTGEFIRLPEATTRIVKTRD--MWLHEIYMGFGFQPKT 265
CNGLL S + + +VV NP TG+ TR ++ R + H+I +G+G
Sbjct: 86 CNGLLLCSTEEGNKTKLVVVNPCTGQ--------TRWIEPRTDYNYNHDIALGYGNNSTK 137
Query: 266 NEYKVVRILKRFWGWQEKRNVVVEIHTLGASRWR---NVGVDLDPRYLTFPRFPTCVSGA 322
Y +IL+ +G + +VEI L ++ WR V +++ Y F G
Sbjct: 138 KSYDSYKILRITYGCK-----LVEIFELKSNSWRVLSKVHPNVEKHYYGGVSF----KGN 188
Query: 323 LHW--FMKLSILCFNFESERFQSFPSP 347
+W + K +IL F+F +E F+S P P
Sbjct: 189 TYWLSYTKFNILSFDFTTETFRSVPLP 215
>AT3G57590.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:21330182-21331396
REVERSE LENGTH=404
Length = 404
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 115/287 (40%), Gaps = 40/287 (13%)
Query: 194 HISCKPEIDRFDVVNSCNGLLCLSD----RDSDYIVVCNPVTGEFIRLPEATTRIVKTRD 249
H ++ RF + + +GLLC D +D+ V+CNP TG + LP D
Sbjct: 85 HTKFSGDVSRF-ICSYVSGLLCFPDLWLSKDAS-PVICNPTTGMYESLP----------D 132
Query: 250 MWLHEIYMGF-GFQPKTNEYKVVRILKRFWGWQEKRNVVVEIHTLGASR--WRNVGVDLD 306
+ ++ GF GF P ++KV+ F +E EI TLG WR+ +
Sbjct: 133 LMRYKNARGFLGFDPIGKQFKVLSEAYPFSDQREHH----EILTLGTEELSWRSNIISC- 187
Query: 307 PRYLTFPRFPTCVSGALHWFMK------LSILCFNFESERFQSFPSPPILFKEHSMGNIT 360
P Y C++G L++ + I+CF+ SE F+ F + + +
Sbjct: 188 PAYDRSLSEGICINGVLYYLAQTLGVPSCVIICFDVRSEEFKYFDAGCFNDQLDDTSGLI 247
Query: 361 MGELKGSLYICDSSSSSHGHTR---IKMWIMKKYGFGESWTKVLNIDTIRTDRWPYGQYF 417
+ +G L + G R ++MW+++ E W K + T+ + F
Sbjct: 248 LVNYEGKLSGINWKYGQAGERRTVELRMWVLEDAEKHE-WVKY--VYTLPENEVLDSCDF 304
Query: 418 PVKYF--KNDAAILMFHSCYTLRHRFIYYEPEKNKFKKFKVLGIGTQ 462
V + D + M ++C Y+ PE+N + ++ G
Sbjct: 305 SVAGVTTRGDIVLCMKYTCKPF--YVFYFNPERNTLQSVEIQDFGAN 349
>AT2G21930.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr2:9347947-9348954 REVERSE LENGTH=335
Length = 335
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 113/274 (41%), Gaps = 50/274 (18%)
Query: 209 SCNGLLCLSDRD-----SDYIVVCNPVTGEFIRLPEATTRIVKTRDMWLHE-IYMGFGFQ 262
S +GL+C S ++V NP T I LP+ HE IY G+
Sbjct: 59 SVHGLICHGPPSTLIVSSPRLIVSNPSTRRSIILPKIDAN---------HECIYHHMGYD 109
Query: 263 PKTNEYKVVRILKRFWGWQEKRNVVVEIHTLG---ASRWRNVGVDLDPRYLTFPRFP-TC 318
P +YKV+ ++K +Q +R + E+ + WR V D P L P C
Sbjct: 110 PIDGDYKVLCMMKGMHVYQ-RRYLAKELQVFTLRKGNSWRMVE-DFPPHCLCHEDTPDLC 167
Query: 319 VSGALHWFMKL------SILCFNFESERFQSFPSPPILFKEHSMGNI----TMGELKGSL 368
++G L++ L +++ F+ SE+F L K G++ T E K +L
Sbjct: 168 INGVLYYVAMLDTASNHAVMSFDVRSEKFD-------LIKGGPDGDLNPKLTRYEGKPAL 220
Query: 369 YICDSSSSSHGHTRIKMWIMKKYGFGESWTKV-LNIDTIRTDRWPYGQYFPVKYFKNDAA 427
S RI +W+++ E W+K+ ++ + R PY + + NDA
Sbjct: 221 LFPGSD------YRINLWVIEDAAKHE-WSKMSYDVSSTSLIRNPYFHH--CVFCTNDAG 271
Query: 428 ILMFHSCYTLRHRFI--YYEPEKNKFKKFKVLGI 459
++ + F+ YY P+KN + + GI
Sbjct: 272 EIVLAPDFVRTKTFVVLYYHPKKNTMRSVVIKGI 305
>AT1G32600.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr1:11794802-11795683 FORWARD
LENGTH=293
Length = 293
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 25/163 (15%)
Query: 209 SCNGLLCLSDRDSDYIVVCNPVTGEFIRLPEATTRIVKTRDMWLHEIYMGFGFQPKTNEY 268
SC G++CL+ +D++ + + P + +F R+P + +T+++ +GFG+ ++Y
Sbjct: 47 SCRGVICLTRKDNNELAIWKPTSTKFKRVP--MIKRGQTQNL------LGFGYDRVLDDY 98
Query: 269 KVVRILKRFWGWQEKRNVVVEIHTLGASRWRNVGVDLDPRYLTFPRFPTCVSGALHWFM- 327
K+V I+ + I T S WR + R T V ++W
Sbjct: 99 KIVTIIDK----------KTYIFTFKESSWRESKLIPSSDCFFKERTGTVVDNCMYWIAN 148
Query: 328 ----KLSILCFNFESERFQSFPSPPIL--FKEHSMGNITMGEL 364
+ ILCF+F +E + P +L + +S +++ GEL
Sbjct: 149 RFNKEKFILCFDFVNEEYSKLNVPMMLSGLEFNSWLDVSRGEL 191
>AT1G52490.1 | Symbols: | CONTAINS InterPro DOMAIN/s: F-box domain,
cyclin-like (InterPro:IPR001810), F-box domain,
Skp2-like (InterPro:IPR022364), F-box associated domain,
type 3 (InterPro:IPR013187), F-box associated
interaction domain (InterPro:IPR017451); BEST
Arabidopsis thaliana protein match is: F-box and
associated interaction domains-containing protein
(TAIR:AT1G32420.1); Has 1577 Blast hits to 1056 proteins
in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 1577; Viruses - 0; Other Eukaryotes
- 0 (source: NCBI BLink). | chr1:19556218-19559011
REVERSE LENGTH=513
Length = 513
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 87/194 (44%), Gaps = 34/194 (17%)
Query: 212 GLLCLSDRDSDYIVVCNPVTGEFIRLPEATTRIVKTRDMWLHEIYMGFGFQPKTNEYKVV 271
G +C S D + + NP T + + LP+ + ++ + + FG+ NEYKV+
Sbjct: 59 GFICCSSSVYDLVTIYNPTTRQCLPLPKIESMVLSPK----RHKHCYFGYDHVMNEYKVL 114
Query: 272 RILKRFWGWQEKRNVVVEIHTLG--ASRWRNVGVDLDPRYLTFPRFPTCVSGALHW---- 325
++ ++ + TLG +WR + ++D ++ R C+ G +++
Sbjct: 115 AMVND----SQELTQTFHVFTLGRDCPQWRKIRGNIDYELISVSRAGVCIDGTIYYVAVR 170
Query: 326 ------FMKLSILCFNFESERFQSFPSPPILFK----EHSMGNITMGELKGSLYICDSSS 375
+ +L ++ F+ +SERF +P L+ E + N G+L C SS+
Sbjct: 171 RKDNENYGELFMMSFDVKSERFYHVRTPETLWSPKCTERGLFN-HQGKLG-----CISSN 224
Query: 376 SSHGHTRIKMWIMK 389
++ I MWIM+
Sbjct: 225 ENN----ISMWIME 234
>AT3G10790.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:3377410-3378369 FORWARD LENGTH=319
Length = 319
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 32/196 (16%)
Query: 177 LVLDKRDVN-------GKRGRQRNH--ISCKPEIDR---FDVVNSCNGLLCLSDRDSDYI 224
L +D R++N + +H + C P+ +D GL+C + +S +
Sbjct: 84 LAVDDREINMQFFHSCSREDPSSDHQTVGCYPDSYPRIWYDFSPPVRGLICCLN-NSTKV 142
Query: 225 VVCNPVTGEFIRLPEATTRIVKTRDMWLHEIYMGFGFQPKTNEYKVVRILKRFWGWQEKR 284
V+ NP T +F LP T+I + EI+ FG+ +EYKV+ + +
Sbjct: 143 VIGNPTTCQFETLPRVRTKIYQ-------EIFPFFGYDHVKDEYKVLCMTISDEYYSRSG 195
Query: 285 NVVVEIH---TLGA--SRWRNVGVDLDPRYLTFPRFPTCVSGALHWFMKL----SILCFN 335
N+V + H TLG +WR + ++ YLT +G +++F ++ S++CF
Sbjct: 196 NIVSKEHKVFTLGCKQKKWRMIECTIN-HYLTPGTQGIFSNGVIYYFARVNDDQSLMCFV 254
Query: 336 FESERFQ--SFPSPPI 349
SE+F P P +
Sbjct: 255 VGSEKFSVVELPRPAV 270