Miyakogusa Predicted Gene
- Lj6g3v1055630.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1055630.1 Non Chatacterized Hit- tr|I1KCZ4|I1KCZ4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49346 PE,94.4,0,P-loop
containing nucleoside triphosphate hydrolases,NULL;
HELICASE_ATP_BIND_1,Helicase, superfamily,CUFF.58871.1
(638 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein | chr1... 1132 0.0
AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family prote... 1131 0.0
AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protei... 1095 0.0
AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |... 739 0.0
AT2G47250.1 | Symbols: | RNA helicase family protein | chr2:193... 664 0.0
AT3G62310.1 | Symbols: | RNA helicase family protein | chr3:230... 663 0.0
AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein | c... 655 0.0
AT4G18465.1 | Symbols: | RNA helicase family protein | chr4:101... 591 e-169
AT4G16680.1 | Symbols: | P-loop containing nucleoside triphosph... 586 e-167
AT1G26370.1 | Symbols: | RNA helicase family protein | chr1:912... 536 e-152
AT1G27900.1 | Symbols: | RNA helicase family protein | chr1:971... 512 e-145
AT5G10370.1 | Symbols: | helicase domain-containing protein / I... 338 9e-93
AT4G01020.1 | Symbols: | helicase domain-containing protein / I... 330 2e-90
AT2G35920.1 | Symbols: | RNA helicase family protein | chr2:150... 306 3e-83
AT1G58050.1 | Symbols: | RNA helicase family protein | chr1:214... 240 3e-63
AT5G14900.1 | Symbols: | helicase associated (HA2) domain-conta... 202 7e-52
AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protei... 187 2e-47
AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 182 7e-46
AT1G58060.1 | Symbols: | RNA helicase family protein | chr1:214... 179 6e-45
AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 170 3e-42
AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 170 3e-42
AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase | chr1:204... 161 2e-39
AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 158 1e-38
AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissu... 151 1e-36
AT2G47680.1 | Symbols: | zinc finger (CCCH type) helicase famil... 135 1e-31
>AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein |
chr1:11742356-11749286 REVERSE LENGTH=1034
Length = 1034
Score = 1132 bits (2927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/638 (81%), Positives = 577/638 (90%)
Query: 1 MYPYRDELLQAVQDHQVLVIVGETGSGKTTQIPQYLHEAGYTKRGMIACTQPXXXXXXXX 60
+Y YRD+LL+AV++HQVLVIVG+TGSGKTTQIPQYLHEAGYTKRG + CTQP
Sbjct: 396 IYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSV 455
Query: 61 XXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVMVDE 120
QEMGVKLGHEVGYSIRFEDCTS+KT+LKYMTDGMLLRE LGEPDLASYSVV+VDE
Sbjct: 456 AARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVIVDE 515
Query: 121 AHERTLSTDILFGLVKDISRFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEI 180
AHERTLSTDILFGLVKDI+RFRPDLKLLISSAT+DAEKFSDYFD+APIF PGRRYPVEI
Sbjct: 516 AHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVEI 575
Query: 181 NFTKAPEADYLDAAIVTSLQIHVTQPPGDILVFLTGQEEIETAEEILKHRTRGLGTKIAE 240
N+T APEADY+DAAIVT L IHV +P GDILVF TGQEEIETAEEILKHR RGLGTKI E
Sbjct: 576 NYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRIRGLGTKIRE 635
Query: 241 LIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKTYN 300
LIICPIYANLP+ELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYV+DPGF KMK+YN
Sbjct: 636 LIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYN 695
Query: 301 PRTGMESLLITPISKASAMQRAGRSGRTGPGKCFRLYTAYNFHNDLDDNTVPEIQRTNLA 360
PRTGMESLLITPISKASA QRAGR+GRT PGKC+RLYTA+N++NDL++NTVPE+QRTNLA
Sbjct: 696 PRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLA 755
Query: 361 NVVLTLKSLGIHDLLHFDFMDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLD 420
+VVL LKSLGIHDL++FDFMDPPP GELTK GRRMAEFPLD
Sbjct: 756 SVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGALNKLGELTKAGRRMAEFPLD 815
Query: 421 PMLSKMIVASEKYKCSDDIISVAAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDHIA 480
PMLSKMIV S+KYKCSD+IIS+AAMLS+G SIFYRPKDKQVHADNARMNFHTGNVGDHIA
Sbjct: 816 PMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIA 875
Query: 481 LLKVYNSWKETNYSTQWCYENYIQVRSMKQARDIRDQLAGLLERVEIELTSNPNDLDAVK 540
LLKVY+SWKETN+STQWCYENYIQVRSMK+ARDIRDQL GLLERVEI+++SN N+LD+V+
Sbjct: 876 LLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSNLNELDSVR 935
Query: 541 KSITSGFFPHSARLQKNGSYRTVKHPQTVHIHPSSGLAQILPRWVVYYELVLTTKEYMRQ 600
KSI +GFFPH+A+LQKNGSYRTVKHPQTVHIHP+SGL+Q+LPRWVVY+ELVLT+KEYMRQ
Sbjct: 936 KSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPNSGLSQVLPRWVVYHELVLTSKEYMRQ 995
Query: 601 VTELKPEWLVEIAPHYYQLKDVEDPTSKKMPRGEGRAT 638
VTELKPEWL+E+APHYYQLKDVED SKKMP+G G+A
Sbjct: 996 VTELKPEWLIELAPHYYQLKDVEDAASKKMPKGAGKAA 1033
>AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family protein |
chr1:11742356-11749286 REVERSE LENGTH=1044
Length = 1044
Score = 1131 bits (2925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/638 (81%), Positives = 577/638 (90%)
Query: 1 MYPYRDELLQAVQDHQVLVIVGETGSGKTTQIPQYLHEAGYTKRGMIACTQPXXXXXXXX 60
+Y YRD+LL+AV++HQVLVIVG+TGSGKTTQIPQYLHEAGYTKRG + CTQP
Sbjct: 406 IYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSV 465
Query: 61 XXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVMVDE 120
QEMGVKLGHEVGYSIRFEDCTS+KT+LKYMTDGMLLRE LGEPDLASYSVV+VDE
Sbjct: 466 AARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVIVDE 525
Query: 121 AHERTLSTDILFGLVKDISRFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEI 180
AHERTLSTDILFGLVKDI+RFRPDLKLLISSAT+DAEKFSDYFD+APIF PGRRYPVEI
Sbjct: 526 AHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVEI 585
Query: 181 NFTKAPEADYLDAAIVTSLQIHVTQPPGDILVFLTGQEEIETAEEILKHRTRGLGTKIAE 240
N+T APEADY+DAAIVT L IHV +P GDILVF TGQEEIETAEEILKHR RGLGTKI E
Sbjct: 586 NYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRIRGLGTKIRE 645
Query: 241 LIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKTYN 300
LIICPIYANLP+ELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYV+DPGF KMK+YN
Sbjct: 646 LIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYN 705
Query: 301 PRTGMESLLITPISKASAMQRAGRSGRTGPGKCFRLYTAYNFHNDLDDNTVPEIQRTNLA 360
PRTGMESLLITPISKASA QRAGR+GRT PGKC+RLYTA+N++NDL++NTVPE+QRTNLA
Sbjct: 706 PRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLA 765
Query: 361 NVVLTLKSLGIHDLLHFDFMDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLD 420
+VVL LKSLGIHDL++FDFMDPPP GELTK GRRMAEFPLD
Sbjct: 766 SVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGALNKLGELTKAGRRMAEFPLD 825
Query: 421 PMLSKMIVASEKYKCSDDIISVAAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDHIA 480
PMLSKMIV S+KYKCSD+IIS+AAMLS+G SIFYRPKDKQVHADNARMNFHTGNVGDHIA
Sbjct: 826 PMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIA 885
Query: 481 LLKVYNSWKETNYSTQWCYENYIQVRSMKQARDIRDQLAGLLERVEIELTSNPNDLDAVK 540
LLKVY+SWKETN+STQWCYENYIQVRSMK+ARDIRDQL GLLERVEI+++SN N+LD+V+
Sbjct: 886 LLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSNLNELDSVR 945
Query: 541 KSITSGFFPHSARLQKNGSYRTVKHPQTVHIHPSSGLAQILPRWVVYYELVLTTKEYMRQ 600
KSI +GFFPH+A+LQKNGSYRTVKHPQTVHIHP+SGL+Q+LPRWVVY+ELVLT+KEYMRQ
Sbjct: 946 KSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPNSGLSQVLPRWVVYHELVLTSKEYMRQ 1005
Query: 601 VTELKPEWLVEIAPHYYQLKDVEDPTSKKMPRGEGRAT 638
VTELKPEWL+E+APHYYQLKDVED SKKMP+G G+A
Sbjct: 1006 VTELKPEWLIELAPHYYQLKDVEDAASKKMPKGAGKAA 1043
>AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protein |
chr2:14872728-14879615 FORWARD LENGTH=1044
Length = 1044
Score = 1095 bits (2833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/637 (79%), Positives = 562/637 (88%)
Query: 1 MYPYRDELLQAVQDHQVLVIVGETGSGKTTQIPQYLHEAGYTKRGMIACTQPXXXXXXXX 60
+Y YRD+LL AV+DHQVL+IVGETGSGKTTQIPQYLHEAGYTK G + CTQP
Sbjct: 406 IYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGKVGCTQPRRVAAMSV 465
Query: 61 XXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVMVDE 120
QEMG KLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRE LGEPDL SYSV++VDE
Sbjct: 466 AARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLGSYSVIIVDE 525
Query: 121 AHERTLSTDILFGLVKDISRFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEI 180
AHERTL TDILFGLVKDI+R RPDLKLLISSAT+DAEKFSD+FD APIF+ PGRRYPV+I
Sbjct: 526 AHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVDI 585
Query: 181 NFTKAPEADYLDAAIVTSLQIHVTQPPGDILVFLTGQEEIETAEEILKHRTRGLGTKIAE 240
FT APEADY+DAAI T L IHV +P GD+LVFL GQEEIE EE LKH+ RGLGTKI E
Sbjct: 586 CFTTAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRE 645
Query: 241 LIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKTYN 300
LIICPIYANLP+ELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYV+DPGF KMK+YN
Sbjct: 646 LIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYN 705
Query: 301 PRTGMESLLITPISKASAMQRAGRSGRTGPGKCFRLYTAYNFHNDLDDNTVPEIQRTNLA 360
PRTGMESLL+TPISKASA QR GR+GRT PGKC+RLYTA+N++NDL+DNTVPEIQRTNLA
Sbjct: 706 PRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLA 765
Query: 361 NVVLTLKSLGIHDLLHFDFMDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLD 420
+VVL+LKSLGIH+LL+FDFMDPPP GELTK GRRMAEFPLD
Sbjct: 766 SVVLSLKSLGIHNLLNFDFMDPPPSEALIKSLELLFALGALNQLGELTKAGRRMAEFPLD 825
Query: 421 PMLSKMIVASEKYKCSDDIISVAAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDHIA 480
PMLSKMIV S+KYKCSD+IIS+AAMLS+G SIFYRPKDKQVHADNA NFH GNVGDHIA
Sbjct: 826 PMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIA 885
Query: 481 LLKVYNSWKETNYSTQWCYENYIQVRSMKQARDIRDQLAGLLERVEIELTSNPNDLDAVK 540
LK+YNSWKETNYSTQWCYENYIQVRSMK+ARDIRDQL GLLERVEI+++SN N+LD+++
Sbjct: 886 FLKIYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVSSNANELDSIR 945
Query: 541 KSITSGFFPHSARLQKNGSYRTVKHPQTVHIHPSSGLAQILPRWVVYYELVLTTKEYMRQ 600
KSI +GFFPH+A+LQKNGSYRTVKHPQTVHIHP+SGL+Q+LPRWVVY++LVLT+KEYMRQ
Sbjct: 946 KSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPASGLSQVLPRWVVYHQLVLTSKEYMRQ 1005
Query: 601 VTELKPEWLVEIAPHYYQLKDVEDPTSKKMPRGEGRA 637
VTELKPEWL+EIAPHYYQLKDVED TSKKMP+ GRA
Sbjct: 1006 VTELKPEWLIEIAPHYYQLKDVEDATSKKMPKTSGRA 1042
>AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |
chr3:9750122-9753719 REVERSE LENGTH=1168
Length = 1168
Score = 739 bits (1907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/626 (55%), Positives = 459/626 (73%), Gaps = 5/626 (0%)
Query: 1 MYPYRDELLQAVQDHQVLVIVGETGSGKTTQIPQYLHEAGYTKRGMIACTQPXXXXXXXX 60
+Y + EL+QAV D+QVLV++GETGSGKTTQ+ QYL EAGYT +G I CTQP
Sbjct: 517 IYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSV 576
Query: 61 XXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVMVDE 120
+E G +LG EVGY+IRFEDCT T++KYMTDGMLLRE L + +L+ YSV+M+DE
Sbjct: 577 AKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDE 636
Query: 121 AHERTLSTDILFGLVKDISRFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEI 180
AHERT+ TD+LFGL+K + + R DL+L+++SATLDAEKFS YF + IF IPGR +PVEI
Sbjct: 637 AHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEI 696
Query: 181 NFTKAPEADYLDAAIVTSLQIHVTQPPGDILVFLTGQEEIETAEEILKHRTRGLGTKIAE 240
+TK PE DYLDAA++T LQIH+T+P GDILVFLTGQEEI++A + L R +GLG + E
Sbjct: 697 LYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGKNVPE 756
Query: 241 LIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKTYN 300
LII P+Y+ LP+E+Q++IF+P P G RKVV+ATNIAE SLTIDGI YV+DPGF K YN
Sbjct: 757 LIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYN 816
Query: 301 PRTGMESLLITPISKASAMQRAGRSGRTGPGKCFRLYTAYNFHNDLDDNTVPEIQRTNLA 360
P+ G+ESL+ITPIS+ASA QRAGR+GRTGPGKC+RLYT + N++ ++PEIQR NL
Sbjct: 817 PKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLG 876
Query: 361 NVVLTLKSLGIHDLLHFDFMDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLD 420
LT+K++GI+DLL FDFMDPP G LTK+GR+MAEFPL+
Sbjct: 877 MTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLE 936
Query: 421 PMLSKMIVASEKYKCSDDIISVAAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDHIA 480
P LSKM++AS CSD+I+++ AM+ GN IFYRP++KQ AD R F GDH+
Sbjct: 937 PPLSKMLLASVDLGCSDEILTMIAMIQTGN-IFYRPREKQAQADQKRAKFFQPE-GDHLT 994
Query: 481 LLKVYNSWKETNYSTQWCYENYIQVRSMKQARDIRDQLAGLLERVEIELTSNPNDLDAVK 540
LL VY +WK N+S WC+EN+IQ RS+++A+D+R QL ++++ ++++ + + ++
Sbjct: 995 LLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVTAGKNFTKIR 1054
Query: 541 KSITSGFFPHSARLQKNGSYRTVKHPQTVHIHPSSGLAQILPRWVVYYELVLTTKEYMRQ 600
K+IT+GFF H AR YRT+ Q V+IHPSS L Q P WV+Y++LV+TTKEYMR+
Sbjct: 1055 KAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHDLVMTTKEYMRE 1114
Query: 601 VTELKPEWLVEIAPHYYQLKDVEDPT 626
VT + P+WLVE+AP +++ V DPT
Sbjct: 1115 VTVIDPKWLVELAPRFFK---VSDPT 1137
>AT2G47250.1 | Symbols: | RNA helicase family protein |
chr2:19399923-19402981 REVERSE LENGTH=729
Length = 729
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/643 (50%), Positives = 443/643 (68%), Gaps = 22/643 (3%)
Query: 5 RDELLQAVQDHQVLVIVGETGSGKTTQIPQYLHEAGYT------KRGMIACTQPXXXXXX 58
+D+ L + +Q L++VGETGSGKTTQIPQ++ +A ++ ++ CTQP
Sbjct: 71 KDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLVGCTQPRRVAAM 130
Query: 59 XXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVMV 118
EM V +G EVGYSIRFEDCTS +T+LKY+TDGMLLRE + +P L Y V+++
Sbjct: 131 SVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMADPLLERYKVIIL 190
Query: 119 DEAHERTLSTDILFGLVKDISRFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPV 178
DEAHERTL+TD+LFGL+K++ R RPDLKL++ SATL+AEKF +YF AP+ K+PGR +PV
Sbjct: 191 DEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPV 250
Query: 179 EINFTKAPEADYLDAAIVTSLQIHVTQPPGDILVFLTGQEEIETAEEILKHRTRGLGTKI 238
EI +T+ PE DYL+AAI T +QIH+ +PPGDILVFLTG+EEIE A + LG ++
Sbjct: 251 EIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEVSNLGDQV 310
Query: 239 AELIICPIYANLPTELQAKIFEPTP----EG---ARKVVLATNIAETSLTIDGIKYVIDP 291
+ + P+Y+ LP +Q KIF+P P EG RK+V++TNIAETSLTIDGI YVIDP
Sbjct: 311 GPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLTIDGIVYVIDP 370
Query: 292 GFCKMKTYNPRTGMESLLITPISKASAMQRAGRSGRTGPGKCFRLYTAYNFHNDLDDNTV 351
GF K K YNPR +ESLL++PISKASA QR+GR+GRT PGKCFRLYT +F+NDL T
Sbjct: 371 GFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTY 430
Query: 352 PEIQRTNLANVVLTLKSLGIHDLLHFDFMDPPPXXXXXXXXXXXXXXXXXXXXGELTKVG 411
PEI R+NLAN VLTLK LGI DL+HFDFMDPP G LTK G
Sbjct: 431 PEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTKTG 490
Query: 412 RRMAEFPLDPMLSKMIVASEKYKCSDDIISVAAMLSVGNSIFYRPKDKQVHADNARMNFH 471
M+EFPLDP +SKM++ S ++ CS++I+SV+AMLSV N F RP++ Q AD A+ F
Sbjct: 491 EIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNC-FVRPREAQKAADEAKARF- 548
Query: 472 TGNV-GDHIALLKVYNSWKETNYSTQWCYENYIQVRSMKQARDIRDQLAGLLERVEIELT 530
G++ GDH+ LL VY+++K+ N WC+EN++ R+MK A ++R QL ++ R +++
Sbjct: 549 -GHIDGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQQLVRIMSRFNLKMC 607
Query: 531 SNP-NDLD---AVKKSITSGFFPHSARLQKNGSYRTVKHPQTVHIHPSSGLAQILPRWVV 586
S N D ++K++ +G+F A L++ G Y TVK Q VH+HPS+ L P WV+
Sbjct: 608 STDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDH-KPEWVI 666
Query: 587 YYELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVEDPTSKK 629
Y E VLTT+ ++R VT+++ EWLV++A HYY L + + +K+
Sbjct: 667 YNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSNFPNCEAKR 709
>AT3G62310.1 | Symbols: | RNA helicase family protein |
chr3:23057516-23060561 REVERSE LENGTH=726
Length = 726
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/644 (50%), Positives = 446/644 (69%), Gaps = 22/644 (3%)
Query: 5 RDELLQAVQDHQVLVIVGETGSGKTTQIPQYLHEA------GYTKRGMIACTQPXXXXXX 58
++E L+ + ++Q L++VGETGSGKTTQIPQ++ +A ++ ++ CTQP
Sbjct: 67 KEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKWLVGCTQPRRVAAM 126
Query: 59 XXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVMV 118
+EM V +G EVGYSIRFEDC+S +T+LKY+TDGMLLRE + +P L Y V+++
Sbjct: 127 SVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAMADPLLERYKVIIL 186
Query: 119 DEAHERTLSTDILFGLVKDISRFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPV 178
DEAHERTL+TD+LFGL+K++ + RPDLKL++ SATL+AEKF DYF AP+ K+PGR +PV
Sbjct: 187 DEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSGAPLMKVPGRLHPV 246
Query: 179 EINFTKAPEADYLDAAIVTSLQIHVTQPPGDILVFLTGQEEIETAEEILKHRTRGLGTKI 238
EI +T+ PE DYL+AAI T +QIH+ +PPGDILVFLTG+EEIE A + LG ++
Sbjct: 247 EIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEVGNLGDQV 306
Query: 239 AELIICPIYANLPTELQAKIFEPTPE-------GARKVVLATNIAETSLTIDGIKYVIDP 291
+ + P+Y+ LP +Q KIF+P PE RK+V++TNIAETSLTIDGI YVIDP
Sbjct: 307 GPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIAETSLTIDGIVYVIDP 366
Query: 292 GFCKMKTYNPRTGMESLLITPISKASAMQRAGRSGRTGPGKCFRLYTAYNFHNDLDDNTV 351
GF K K YNPR +ESLL++PISKASA QR+GR+GRT PGKCFRLYT +F+NDL T
Sbjct: 367 GFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTY 426
Query: 352 PEIQRTNLANVVLTLKSLGIHDLLHFDFMDPPPXXXXXXXXXXXXXXXXXXXXGELTKVG 411
PEI R+NLAN VLTLK LGI DL+HFDFMDPP G LTK G
Sbjct: 427 PEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTKTG 486
Query: 412 RRMAEFPLDPMLSKMIVASEKYKCSDDIISVAAMLSVGNSIFYRPKDKQVHADNARMNFH 471
M+EFPLDP ++KM++ S ++ CS++I+SV+AMLSV N F RP++ Q AD A+ F
Sbjct: 487 EIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNC-FIRPREAQKAADEAKARF- 544
Query: 472 TGNV-GDHIALLKVYNSWKETNYSTQWCYENYIQVRSMKQARDIRDQLAGLLERVEIELT 530
G++ GDH+ LL VY+++K+ N WCYEN+I R+MK A ++R QL ++ R +++
Sbjct: 545 -GHIEGDHLTLLNVYHAFKQNNEDPNWCYENFINNRAMKSADNVRQQLVRIMSRFNLKMC 603
Query: 531 SNP-NDLD---AVKKSITSGFFPHSARLQKNGSYRTVKHPQTVHIHPSSGLAQILPRWVV 586
S N D ++K++ +G+F A L++ G Y TVK Q VH+HPS+ L P WV+
Sbjct: 604 STDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDH-KPEWVI 662
Query: 587 YYELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVEDPTSKKM 630
Y E VLT++ ++R VT+++ EWLV++A HYY L + + +K++
Sbjct: 663 YNEYVLTSRNFIRTVTDIRGEWLVDVASHYYDLSNFPNCEAKRV 706
>AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein |
chr5:4122747-4128660 FORWARD LENGTH=1255
Length = 1255
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/627 (50%), Positives = 437/627 (69%), Gaps = 8/627 (1%)
Query: 1 MYPYRDELLQAVQDHQVLVIVGETGSGKTTQIPQYLHEAGYTKRGMIACTQPXXXXXXXX 60
++ RDELLQ ++++QV+V+VGETGSGKTTQ+ QYLHE GYT G++ CTQP
Sbjct: 560 IFSVRDELLQVIRENQVIVVVGETGSGKTTQLTQYLHEDGYTINGIVGCTQPRRVAAMSV 619
Query: 61 XXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVMVDE 120
+EM +LG ++GY+IRFED T T++KYMTDG+LLRE L + DL Y VV++DE
Sbjct: 620 AKRVSEEMETELGDKIGYAIRFEDVTGPNTVIKYMTDGVLLRETLKDSDLDKYRVVVMDE 679
Query: 121 AHERTLSTDILFGLVKDISRFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEI 180
AHER+L+TD+LFG++K + R D KL+++SATL+A+KFS++F S PIF IPGR +PV I
Sbjct: 680 AHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSNFFGSVPIFNIPGRTFPVNI 739
Query: 181 NFTKAPEADYLDAAIVTSLQIHVTQPPGDILVFLTGQEEIETAEEILKHRTRGL----GT 236
++K P DY++AA+ ++ IH+T PPGDIL+F+TGQ+EIE A LK R L
Sbjct: 740 LYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFSLKERMEQLVSSSSR 799
Query: 237 KIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKM 296
+I L+I PIY+ LP +LQAKIF+ +GARK ++ATNIAETSLT+DGI YVID G+ KM
Sbjct: 800 EITNLLILPIYSQLPADLQAKIFQKPEDGARKCIVATNIAETSLTVDGIYYVIDTGYGKM 859
Query: 297 KTYNPRTGMESLLITPISKASAMQRAGRSGRTGPGKCFRLYTAYNFHNDLDDNTVPEIQR 356
K +NPR GM++L + PIS+A++ QRAGR+GRTGPG C+RLYT + N++ + VPEIQR
Sbjct: 860 KVFNPRMGMDALQVFPISRAASDQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQR 919
Query: 357 TNLANVVLTLKSLGIHDLLHFDFMDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAE 416
TNL NVVL LKSL I +LL FDFMDPPP G LT +G +M E
Sbjct: 920 TNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGGLTDLGWKMVE 979
Query: 417 FPLDPMLSKMIVASEKYKCSDDIISVAAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVG 476
FPLDP L+KM++ E+ C D+++++ +MLSV S+F+RPK++ +D AR F
Sbjct: 980 FPLDPPLAKMLLMGERLDCIDEVLTIVSMLSV-PSVFFRPKERAEESDAAREKFFVPE-S 1037
Query: 477 DHIALLKVYNSWKETNYSTQWCYENYIQVRSMKQARDIRDQLAGLLERVEIELTSNPNDL 536
DH+ LL VY WKE +Y WC ++Y+QV+ +++AR++R QL +L++++IEL S D
Sbjct: 1038 DHLTLLNVYQQWKEHDYRGDWCNDHYLQVKGLRKAREVRSQLLDILKQLKIELRSCGPDW 1097
Query: 537 DAVKKSITSGFFPHSARLQKNGSYRTVKHPQTVHIHPSSGLAQI--LPRWVVYYELVLTT 594
D V+K+I S +F +SARL+ G Y + H+HPSS L + P +VVY+EL+LTT
Sbjct: 1098 DIVRKAICSAYFHNSARLKGVGEYVNCRTGMPCHLHPSSALYGLGYTPDYVVYHELILTT 1157
Query: 595 KEYMRQVTELKPEWLVEIAPHYYQLKD 621
KEYM+ T ++P WL E+ P ++ +KD
Sbjct: 1158 KEYMQCATSVEPHWLAELGPMFFSVKD 1184
>AT4G18465.1 | Symbols: | RNA helicase family protein |
chr4:10197056-10201611 FORWARD LENGTH=695
Length = 695
Score = 591 bits (1523), Expect = e-169, Method: Compositional matrix adjust.
Identities = 299/640 (46%), Positives = 422/640 (65%), Gaps = 24/640 (3%)
Query: 1 MYPYRDELLQAVQDHQVLVIVGETGSGKTTQIPQYLHEAGYTKRG-MIACTQPXXXXXXX 59
+Y YR E+L V++H +IVGETGSGKTTQIPQYL EAG+ + G +IACTQP
Sbjct: 50 VYKYRTEILYLVENHATTIIVGETGSGKTTQIPQYLKEAGWAEGGRVIACTQPRRLAVQA 109
Query: 60 XXXXXXQEMGVKLGHEVGYSIRFED-CTSEKTILKYMTDGMLLREFLGEPDLASYSVVMV 118
+EMGV LG EVGY+IRFED TS T +K++TDG+L+RE + +P L YSV+M+
Sbjct: 110 VSARVAEEMGVNLGEEVGYTIRFEDHTTSGVTSVKFLTDGVLIREMMEDPLLTKYSVIMI 169
Query: 119 DEAHERTLSTDILFGLVKDISRFRPDLKLLISSATLDAEKFSDYFDS-----AP------ 167
DEAHER++STDIL GL+K I R RP+L+L+ISSAT++A+ S++F+S AP
Sbjct: 170 DEAHERSISTDILLGLLKKIQRRRPELRLIISSATIEAKTMSNFFNSSKKRHAPEGSTPG 229
Query: 168 ------IFKIPGRRYPVEINFTKAPEADYLDAAIVTSLQIHVTQPPGDILVFLTGQEEIE 221
I + GR + V+I++ + P +DY+ + + T L I+ +PPGD+LVFLTGQE+IE
Sbjct: 230 PKLEPAILSVEGRGFSVKIHYVEEPVSDYIRSVVSTILLINEREPPGDVLVFLTGQEDIE 289
Query: 222 TAEEILKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLT 281
TA ++L+ + L+ P+Y+ L Q IF PTP G RKV+L+TNIAETSLT
Sbjct: 290 TAIKLLEEEAHSNQKNSSGLLPLPLYSGLSRSEQELIFTPTPRGKRKVILSTNIAETSLT 349
Query: 282 IDGIKYVIDPGFCKMKTYNPRTGMESLLITPISKASAMQRAGRSGRTGPGKCFRLYTAYN 341
++G+ YVID GF K K YNP + +ESL++ PISKASA QR+GR+GR PGKC+RLYT
Sbjct: 350 LEGVVYVIDSGFSKQKFYNPISDIESLVVAPISKASARQRSGRAGRVRPGKCYRLYTEDY 409
Query: 342 FHNDLDDNTVPEIQRTNLANVVLTLKSLGIHDLLHFDFMDPPPXXXXXXXXXXXXXXXXX 401
F N + +PE+QR+NL + V+ LK+LGI ++L FD+ PP
Sbjct: 410 FLNQMPGEGIPEMQRSNLVSTVIQLKALGIDNILGFDWPAPPSSEAMIRALEVLYSLQIL 469
Query: 402 XXXGELTK-VGRRMAEFPLDPMLSKMIVASEKYKCSDDIISVAAMLSVGNSIFYRPKDKQ 460
+LT G ++AE PLDPM+SKMI+AS + CS +II++AA+LSV S++ + Q
Sbjct: 470 DDDAKLTSPTGFQVAELPLDPMISKMILASSELGCSHEIITIAAVLSV-QSVWIIARGVQ 528
Query: 461 VHADNARMNFHTGNVGDHIALLKVYNSWKETNYSTQWCYENYIQVRSMKQARDIRDQLAG 520
D A++ F GDH+ L VY + E+ TQWCY+N++ +SMK+ +IRDQL
Sbjct: 529 KEQDEAKLRFAAAE-GDHVTFLNVYKGFLESKKPTQWCYKNFLNYQSMKKVVEIRDQLKR 587
Query: 521 LLERVEIELTSNPNDLDAVKKSITSGFFPHSARLQ--KNGSYRTVKHPQTVHIHPSSGLA 578
+ R+ I L S D++AV+K++T+GFF ++ RL+ NG Y+T++ + V+IHPSS L
Sbjct: 588 IARRLGITLKSCDGDMEAVRKAVTAGFFANACRLEPHSNGVYKTIRGSEEVYIHPSSVLF 647
Query: 579 QILPRWVVYYELVLTTKEYMRQVTELKPEWLVEIAPHYYQ 618
++ P+WVVY +V T ++YMR V + P WL E+APH+YQ
Sbjct: 648 RVNPKWVVYQSIVSTERQYMRNVVTINPSWLTEVAPHFYQ 687
>AT4G16680.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:9388613-9390774
REVERSE LENGTH=656
Length = 656
Score = 586 bits (1511), Expect = e-167, Method: Compositional matrix adjust.
Identities = 285/412 (69%), Positives = 327/412 (79%), Gaps = 4/412 (0%)
Query: 1 MYPYRDELLQAVQDHQVLVIVGETGSGKTTQIPQYLHEAGYTKRGMIACTQPXXXXXXXX 60
++ YR+ELL+ ++++QVLVIVGETGSGKTTQIPQYL EAGYTKRG I CTQP
Sbjct: 217 IHGYREELLKLIEENQVLVIVGETGSGKTTQIPQYLQEAGYTKRGKIGCTQPRRVAAMSV 276
Query: 61 XXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVMVDE 120
QE+GVKLGHEVGYSIRFEDCTSEKT++KYMTDGMLLRE L EP L SYSV+++DE
Sbjct: 277 ASRVAQEVGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLRELLIEPKLDSYSVIIIDE 336
Query: 121 AHERTLSTDILFGLVKDISRFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEI 180
AHERTLSTDILF LVKD+++ RPDL+L+ISSATL+A+KFS+YFDSA I+ IPGRRYPVE
Sbjct: 337 AHERTLSTDILFALVKDVAKVRPDLRLIISSATLEAKKFSEYFDSARIYLIPGRRYPVEK 396
Query: 181 NFTKAPEADYLDAAIVTSLQIHVTQPPGDILVFLTGQEEIETAEEILKHRTRGLGTKIAE 240
F K PE DYL+ I T +QIH T+ GDILVFLTGQEEIET E LK R LGTK +E
Sbjct: 397 LFRKCPEPDYLETVIRTVVQIHQTEAIGDILVFLTGQEEIETVETNLKRRMMDLGTKGSE 456
Query: 241 LIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKTYN 300
+IICPIY+NLPT LQAK+FEP P+G RKVVLATNIAETSLTIDG+KYVIDPG+CK+ +YN
Sbjct: 457 IIICPIYSNLPTPLQAKVFEPAPKGTRKVVLATNIAETSLTIDGVKYVIDPGYCKINSYN 516
Query: 301 PRTGMESLLITPISKASAMQRAGRSGRTGPGKCFRLYTAYNFHNDLDDNTVPEIQRTNLA 360
PRTGMESLL+TPISKASA QRAGRSGRTGPGKCFRLY DL+ T+PEIQR NLA
Sbjct: 517 PRTGMESLLVTPISKASAAQRAGRSGRTGPGKCFRLYNI----KDLEPTTIPEIQRANLA 572
Query: 361 NVVLTLKSLGIHDLLHFDFMDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGR 412
+VVLTLKSLGI D+ +FDFMDPPP GE+TK R
Sbjct: 573 SVVLTLKSLGIQDVFNFDFMDPPPENALLKALELLYALGALDEIGEITKGTR 624
>AT1G26370.1 | Symbols: | RNA helicase family protein |
chr1:9122030-9125368 REVERSE LENGTH=717
Length = 717
Score = 536 bits (1382), Expect = e-152, Method: Compositional matrix adjust.
Identities = 280/668 (41%), Positives = 407/668 (60%), Gaps = 60/668 (8%)
Query: 8 LLQAVQDHQVLVIVGETGSGKTTQIPQYLHEAGYTKRG-MIACTQPXXXXXXXXXXXXXQ 66
L++ VQ + +L+IVGETGSGKTTQ+PQ+L+ AG+ + G MI TQP +
Sbjct: 50 LVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREGKMIGITQPRRIAAVTVAKRVAE 109
Query: 67 EMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTL 126
E V+LG +VGYSIRF+D TS T LKYMTDG+LLRE L +P L+ YSV++VDEAH+R++
Sbjct: 110 ECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREALLDPHLSRYSVIIVDEAHDRSV 169
Query: 127 STDILFGLVKDISRFRPD-----------------------------------------L 145
TD+L L+K I R R L
Sbjct: 170 HTDVLLALLKKIQRTRSQPVSEKTEFGNVASQVQTTTRDANGPQQNGVLKGYQGRKLSPL 229
Query: 146 KLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTSLQIHVTQ 205
KL+I SA+LDA FS+YF A + GR++PV+I +T PE+DY+DA +VT QIH +
Sbjct: 230 KLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESDYVDATLVTIFQIHFEE 289
Query: 206 PPGDILVFLTGQEEIETAEEILKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPEG 265
PGDILVFLTGQ+EIE+ E +++ R + + +L+ I++ LP+E Q K+F P P G
Sbjct: 290 KPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFSALPSEQQMKVFAPAPTG 349
Query: 266 ARKVVLATNIAETSLTIDGIKYVIDPGFCKMKTYNPRTGMESLLITPISKASAMQRAGRS 325
RKV+LATNIAETS+TI GI+YVIDPGF K ++Y+P GMESL + P SKA +QR+GR+
Sbjct: 350 FRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPASKAQTLQRSGRA 409
Query: 326 GRTGPGKCFRLYTAYNFHNDLDDNTVPEIQRTNLANVVLTLKSLGIHDLLHFDFMDPPPX 385
GR GPGK FRLY F L+D+T PEI+R NL+N++L LK+LGI D++ FDF+D P
Sbjct: 410 GREGPGKSFRLYPEREFEK-LEDSTKPEIKRCNLSNIILQLKALGIDDIVGFDFIDKPSR 468
Query: 386 XXXXXXXXXXXXXXXXXXXGELTK-VGRRMAEFPLDPMLSKMIVASEKYKCSDDIISVAA 444
G+L VG +M+ PL+P+ SK ++ + ++ C ++++ A
Sbjct: 469 GAIIKALAELHSLGALADDGKLENPVGYQMSRLPLEPVYSKALILANQFNCLEEMLITVA 528
Query: 445 MLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWKE-------------- 490
+LSV SIFY P++K+ A ++ +F + GDH+ L VY E
Sbjct: 529 VLSV-ESIFYDPREKREEARTSKNHFASVE-GDHLTYLSVYRESDEFLEKRKAAGSGNNI 586
Query: 491 TNYSTQWCYENYIQVRSMKQARDIRDQLAGLLERVEIELTSNPNDLDAVKKSITSGFFPH 550
+WC ENY+ RS+K ARDI Q+ +E++ ++S ND+ A ++ + + FF
Sbjct: 587 DKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIGFNVSSCGNDMLAFRRCLAASFFLK 646
Query: 551 SARLQKNGSYRTVKHPQTVHIHPSSGLAQILPRWVVYYELVLTTKEYMRQVTELKPEWLV 610
+A+ Q +G+YR ++ + VHIHP+S L + P V++ EL+ T+K+Y++ +T + WL
Sbjct: 647 AAQRQLDGTYRALESGEVVHIHPTSVLFRAKPECVIFNELMQTSKKYIKNLTIIDSLWLS 706
Query: 611 EIAPHYYQ 618
E+APH++Q
Sbjct: 707 ELAPHHFQ 714
>AT1G27900.1 | Symbols: | RNA helicase family protein |
chr1:9715615-9720346 REVERSE LENGTH=700
Length = 700
Score = 512 bits (1319), Expect = e-145, Method: Compositional matrix adjust.
Identities = 263/631 (41%), Positives = 393/631 (62%), Gaps = 22/631 (3%)
Query: 4 YRDELLQAVQDHQVLVIVGETGSGKTTQIPQYLHEAGYTKRGMIACTQPXXXXXXXXXXX 63
+ +++++ V+ + V+VI+GETGSGK+TQ+ Q LH GYTK G+IA TQP
Sbjct: 9 FEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRVAAVSVARR 68
Query: 64 XXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVMVDEAHE 123
QE+ V LG +VGY+IRFED T+ KT +KY+TDG+LLRE L P L YSV+++DEAHE
Sbjct: 69 VAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSVIILDEAHE 128
Query: 124 RTLSTDILFGLVKDISRFRP-DLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINF 182
R+L+TDIL GLVK + R R + K+LI+SATLD EK S++F P+ +PG+ YPVEI +
Sbjct: 129 RSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGKLYPVEILY 188
Query: 183 TKAPEADYLDAAIVTSLQIHVTQPPGDILVFLTGQEEIETAEEILKHRTRGLGT-KIAEL 241
+K Y+++++ ++ IHV +P GDIL+F+TGQ++IE L+ + R L +
Sbjct: 189 SKERPVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEKVRSLAEGSCMDA 248
Query: 242 IICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKTYNP 301
II P++ +LP E+Q ++F P P R+ +++TNIAETSLT+DG+ YVID G+ K + YNP
Sbjct: 249 IIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNP 308
Query: 302 RTGMESLLITPISKASAMQRAGRSGRTGPGKCFRLYTAYNFHNDLDDNTVPEIQRTNLAN 361
+GM SL + ISK A QRAGR+GRT PGKC+RLY + +D D T+PEIQRT+LA
Sbjct: 309 SSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPEIQRTSLAG 368
Query: 362 VVLTLKSLGIH--DLLHFDFMDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPL 419
VL LKSL + D+L FDF+D P G +T++GR M++ PL
Sbjct: 369 SVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENGAITRIGRTMSDLPL 428
Query: 420 DPMLSKMIVASEKYKCSDDIISVAAMLSVGNSIF---YRPKDKQVHADNARMNFHTGNVG 476
+P LS+ ++ + + C ++V AMLS ++ +P +K+ D + G
Sbjct: 429 EPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARSKPSEKKRKHDEDSNLPNGSGYG 488
Query: 477 DHIALLKVYNSWKETNYSTQWCYENYIQVRSMKQARDIRDQLAGLLERV---EIEL---- 529
DHI LL+++ SW TNY WC EN +QVR M +D+R QL +++++ +E+
Sbjct: 489 DHIQLLQIFESWDRTNYDPVWCKENGMQVRGMVFVKDVRRQLCQIMQKISKDRLEVGADG 548
Query: 530 --TSNPNDLDAVKKSITSGFFPHSA-RLQKNGSYRTVK-HPQTVHIHPSSGLAQ----IL 581
+S+ +D ++K++ G A R+ ++ YRT+ Q V +HPSS L+ ++
Sbjct: 549 RKSSSRDDYRKLRKALCVGNANQIAERMLRHNGYRTLSFQSQLVQVHPSSVLSADNDGMM 608
Query: 582 PRWVVYYELVLTTKEYMRQVTELKPEWLVEI 612
P +VVY+EL+ TT+ +MR V + W+ I
Sbjct: 609 PNYVVYHELISTTRPFMRNVCAVDMAWVAPI 639
>AT5G10370.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
| chr5:3261245-3267188 FORWARD LENGTH=1775
Length = 1775
Score = 338 bits (866), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 222/648 (34%), Positives = 337/648 (52%), Gaps = 50/648 (7%)
Query: 1 MYPYRDELLQAVQDHQVLVIVGETGSGKTTQIPQYLHEAGYTKRGMIACTQPXXXXXXXX 60
+Y YR ++L+ + Q++V++GETGSGK+TQ+ Q+L ++G I CTQP
Sbjct: 308 IYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAMTL 367
Query: 61 XXXXXQEM-GVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVMVD 119
+E G + V + F + + YMTD LL+ ++ + L+ S V++D
Sbjct: 368 ADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVIID 427
Query: 120 EAHERTLSTDILFGLVKDISRFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVE 179
EAHER+L+TD+L L+K + R DL+L+I SAT DA++ S YF S I + GR +PVE
Sbjct: 428 EAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFSCGILLVNGRNFPVE 487
Query: 180 INFTKAPE---------ADYLDAAIVTSLQIHVTQPPGDILVFLTGQEEIETAEEILKHR 230
I ++ + A Y+ + +++IH T+ G IL FLT Q E+E A E
Sbjct: 488 IVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERFI-- 545
Query: 231 TRGLGTKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVID 290
I P++ L E Q ++F+ P G RKV+ ATNIAETSLTI G+KYVID
Sbjct: 546 -------TPSAIALPLHGKLSFEEQFRVFQNHP-GRRKVIFATNIAETSLTIPGVKYVID 597
Query: 291 PGFCKMKTYNPRTGMESLLITPISKASAMQRAGRSGRTGPGKCFRLYTAYNFHNDLDDNT 350
G K Y PRTGM L + +S++SA QRAGR+GRT PG+C+RLY+ +F + ++ N
Sbjct: 598 SGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDF-DSMNLNQ 656
Query: 351 VPEIQRTNLANVVLTLKSLGIHDLLHFDFMDPP-PXXXXXXXXXXXXXXXXXXXXG--EL 407
PEI+R +L +L + +LG++++ F+F+D P P G EL
Sbjct: 657 EPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEKNGVHEL 716
Query: 408 TKVGRRMAEFPLDPMLSKMIVASEKYKCSDDIISVAAMLSVGNSIFYRPK--DKQVHADN 465
T+ G + + L+P L K+I+ +++ + I +AA+++ +SIF R D ++ AD
Sbjct: 717 TQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADR 776
Query: 466 ARMNFHTGNVGDHIALLKVYNSWKE--TNYSTQWCYENYIQVRSMKQARDIRDQLAGLLE 523
++ F N GD LL VY W +WC+EN + +SM++ D +L +E
Sbjct: 777 LKVQFCNQN-GDLFTLLSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVKELEICIE 835
Query: 524 RVEIELTS------NPNDLDAVKKSITSGFFPHSARLQKNGS---------YRTVKHPQT 568
R E+ L S NPN+ K + A L +N + Y Q
Sbjct: 836 R-ELTLVSPSYWVWNPNEGTKHDKHLKMVIL---ASLAENVAMYTGYNQLGYEVALTGQQ 891
Query: 569 VHIHPSSGLAQI--LPRWVVYYELVLTTKEYMRQVTELKPEWLVEIAP 614
V +HPS L P WVV+ EL+ +Y+ VT E L + P
Sbjct: 892 VQLHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTACDFEALYMLDP 939
>AT4G01020.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
| chr4:439086-445043 FORWARD LENGTH=1787
Length = 1787
Score = 330 bits (845), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 221/648 (34%), Positives = 334/648 (51%), Gaps = 50/648 (7%)
Query: 1 MYPYRDELLQAVQDHQVLVIVGETGSGKTTQIPQYLHEAGYTKRGMIACTQPXXXXXXXX 60
+Y YR ++L+ + Q++V++GETGSGK+TQ+ Q+L ++G I CTQP
Sbjct: 305 IYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAMTL 364
Query: 61 XXXXXQEM-GVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVMVD 119
+E G + V + F + + YMTD LL+ ++ + L+ S V++D
Sbjct: 365 TDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVIID 424
Query: 120 EAHERTLSTDILFGLVKDISRFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVE 179
EAHER+L+TD+L L++ + R DL+L+I SAT DA + S Y I + GR +PVE
Sbjct: 425 EAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFPVE 484
Query: 180 INFTKAPE---------ADYLDAAIVTSLQIHVTQPPGDILVFLTGQEEIETAEEILKHR 230
I ++ + A Y + +++IH T+ G IL FLT Q E+E A E
Sbjct: 485 IVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACE----- 539
Query: 231 TRGLGTKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVID 290
R + L P++ L E Q +F+ P G RKV+ ATNIAETSLTI G+KYVID
Sbjct: 540 -RFVAPSAIAL---PLHGKLSFEEQFMVFQNYP-GRRKVIFATNIAETSLTIPGVKYVID 594
Query: 291 PGFCKMKTYNPRTGMESLLITPISKASAMQRAGRSGRTGPGKCFRLYTAYNFHNDLDDNT 350
G K Y PRTGM L + +S++SA QRAGR+GRT PG+C+RLY+ +F + ++ N
Sbjct: 595 SGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDF-DSMNLNQ 653
Query: 351 VPEIQRTNLANVVLTLKSLGIHDLLHFDFMDPP-PXXXXXXXXXXXXXXXXXXXXG--EL 407
PEI+R +L +L + +LGI ++ F+F+D P P G EL
Sbjct: 654 EPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEKNGVLEL 713
Query: 408 TKVGRRMAEFPLDPMLSKMIVASEKYKCSDDIISVAAMLSVGNSIFYRPK--DKQVHADN 465
T+ G + + L+P L K+I+ +++ + I +AA+++ +SIF R D ++ AD
Sbjct: 714 TQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADR 773
Query: 466 ARMNFHTGNVGDHIALLKVYNSWKE--TNYSTQWCYENYIQVRSMKQARDIRDQLAGLLE 523
++ F N GD LL VY W + +WC+EN + +SM++ D +L +E
Sbjct: 774 LKVQFCNDN-GDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRRCEDTVKELEICIE 832
Query: 524 RVEIELTS------NPNDLDAVKKSITSGFFPHSARLQKNGS---------YRTVKHPQT 568
R E+ L S NPN+ K + A L +N + Y Q
Sbjct: 833 R-ELTLVSPSYWVWNPNEGTKHDKYLKMVIL---ASLAENVAMYTGYDQLGYEVALTSQQ 888
Query: 569 VHIHPSSGLAQI--LPRWVVYYELVLTTKEYMRQVTELKPEWLVEIAP 614
V +HPS L P WVV+ EL+ +Y+ VT E L + P
Sbjct: 889 VQLHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTAFDFEALYMLDP 936
>AT2G35920.1 | Symbols: | RNA helicase family protein |
chr2:15075674-15080506 FORWARD LENGTH=995
Length = 995
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 217/690 (31%), Positives = 337/690 (48%), Gaps = 94/690 (13%)
Query: 2 YPYRDELLQAVQDHQVLVIVGETGSGKTTQIPQY-LHEAGYTKRGM---IACTQPXXXXX 57
+ ++E L +V +QVLV+ GETG GKTTQ+PQ+ L E + RG I CTQP
Sbjct: 231 FKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCNIICTQPRRISA 290
Query: 58 XXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVM 117
E G +G VGY IR E S++T L + T G+LLR + +P+L + S ++
Sbjct: 291 ISVASRISAERGESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPNLTNVSHLL 350
Query: 118 VDEAHERTLSTDILFGLVKDISRFRPDLKLLISSATLDAEKFSDYFDSA-----PIFKIP 172
VDE HER ++ D L +++D+ RPDL+L++ SAT++A+ FS YF ++ P F P
Sbjct: 351 VDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMHIPGFTFP 410
Query: 173 ------------------------------GRRYPVEI---------------------- 180
GRR E
Sbjct: 411 VAELFLEDVLEKSRYNIKSSDSGNYQGSSRGRRRESESKKDDLTTLFEDIDINSHYKSYS 470
Query: 181 ----NFTKAPEADYLDAAIVTSLQIHVT--QPPGDILVFLTGQEEI-ETAEEILKHRTRG 233
N +A +D +V + H+ + G ILVFLTG +EI + E+I + G
Sbjct: 471 SATRNSLEAWSGAQIDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEKINMNNFLG 530
Query: 234 LGTKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGF 293
+K ++ P++ ++PT Q +IF+ P RK+VLATNIAE+S+TID + YV+D G
Sbjct: 531 DSSK---FLVLPLHGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGK 587
Query: 294 CKMKTYNPRTGMESLLITPISKASAMQRAGRSGRTGPGKCFRLYTAYNFHNDLDDNTVPE 353
K +Y+ + LL + ISKASA QR GR+GR G C+RLY ++ +PE
Sbjct: 588 AKETSYDALNKVACLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKV-IYDAFPQYQLPE 646
Query: 354 IQRTNLANVVLTLKSLGIHDLLHF--DFMDPPPXXXXXXXXXXXXXXXXXXXXGELTKVG 411
I RT L + L +KSL + + F + PP ELT +G
Sbjct: 647 IIRTPLQELCLHIKSLQVGSIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELTPLG 706
Query: 412 RRMAEFPLDPMLSKMIVASEKYKCSDDIISVAAMLSVGNSIFYRPKDKQVHADNARMNFH 471
R + P+DP + KM++ ++C + +++AA L+ S F P +++ AD A+ F
Sbjct: 707 RHLCTLPVDPNIGKMLLIGAIFQCVNPALTIAAALAY-RSPFVLPLNRKEEADEAKRYFA 765
Query: 472 TGNVGDHIALLKVYNSWKETNYS---TQWCYENYIQVRSMKQARDIRDQLAGLLERVEIE 528
+ DHIALLK Y +++ +C++N++ +++ D+R+Q LL +
Sbjct: 766 GDSCSDHIALLKAYEGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFV 825
Query: 529 LTSNPN-------DLDAVKKSITSGFFPHSARLQKNGSYRTV---KHPQTVHIHPSSGLA 578
S PN D++ + + +G +P+ + ++ G RT K V IHP S A
Sbjct: 826 DKSKPNAYNQYSYDMEMISAVLCAGLYPNVVQCKRRGK-RTAFYTKELGKVDIHPGSVNA 884
Query: 579 QI----LPRWVVYYELVLTTKEYMRQVTEL 604
++ LP ++VY E V TT Y+R T +
Sbjct: 885 RVNLFSLP-YLVYSEKVKTTSVYIRDSTNI 913
>AT1G58050.1 | Symbols: | RNA helicase family protein |
chr1:21478590-21487839 REVERSE LENGTH=1417
Length = 1417
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 171/613 (27%), Positives = 285/613 (46%), Gaps = 96/613 (15%)
Query: 5 RDELLQAVQDHQVLVIVGETGSGKTTQIPQYLHE----AGYTKRGMIACTQPXXXXXXXX 60
+ ++LQ +++ VLV+ GETGSGKTTQ+PQ++ + +G+ I CTQP
Sbjct: 603 KKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRAITVAQR 662
Query: 61 XXXXXQEMGVKLGHEV-GYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVMVD 119
E + V Y +R ++ S+KT L + T G+LLR+ +G+ L + ++VD
Sbjct: 663 VADERCEPPPGFDNSVVAYQVRHQNARSDKTRLLFCTTGILLRKLVGDTTLKDVTHIIVD 722
Query: 120 EAHERTLSTDILFGLVKDISRFR------PDLKLLISSATLDAEKFSDYFDSAPIFKIPG 173
E HER+L D L ++K + + P LK+++ SAT+DA +FS YF PI G
Sbjct: 723 EVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDAHQFSRYFGQCPIITAQG 782
Query: 174 RRYPVEINF-------------TKAPEADYLDAAIVTSL-QIHVTQPPGDILV------F 213
R +PV F + +P A D +I L ++V + ++++ +
Sbjct: 783 RTHPVTTYFLEDIYERTKYLLASDSPAALSSDTSITDKLGSVNVPRGKKNLMLAGWGDSY 842
Query: 214 LTGQEEIETAEEILKHRTRG-LGTKIAELIIC---------------------------- 244
L ++ + T+ + +K+ + + E +IC
Sbjct: 843 LVSEDSLNTSYDSIKYIASAVVDYDLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRL 902
Query: 245 ---------------PIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVI 289
P+++++ + Q K+F P+G RKV++ATNIAETS+TI+ + YVI
Sbjct: 903 AASYRFRGASGDWLLPLHSSIASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVI 962
Query: 290 DPGFCKMKTYNPRTGMESLLITPISKASAMQRAGRSGRTGPGKCFRLYTAYNFHNDLDDN 349
D G K YNP + S++ +SKA+A QR GR+GR PG CF LYT + F +
Sbjct: 963 DSGKHKENRYNPHKKLSSMVEDWVSKANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPY 1022
Query: 350 TVPEIQRTNLANVVLTLKSLGIHDLLHF--DFMDPPPXXXXXXXXXXXXXXXXXXXXGEL 407
VPE+ R L + L +K LG+ + F ++PP EL
Sbjct: 1023 QVPEMLRVPLVELCLHIKLLGLGQIKPFLSKALEPPSESAINSAILLLHKVGALEGDEEL 1082
Query: 408 TKVGRRMAEFPLDPMLSKMIVASEKYKCSDDIISVAAMLSVGNSIFYRPKDKQVHADNAR 467
T +G +A+ P+D ++ KM++ + C I+S+AA LS S F KD+Q + D +
Sbjct: 1083 TPLGHHLAKLPVDLLIGKMLLYGGIFGCLSPILSIAAFLSCCKSPFVYAKDEQ-NVDRVK 1141
Query: 468 MNFHTGNV------------GDHIALLKVYNSW----KETNY--STQWCYENYIQVRSMK 509
+ + + DH+ ++ Y W E + + +C ++ M+
Sbjct: 1142 LALLSDKLESSSNLNNNDRQSDHLLMVVAYEKWVRILHEQGFKAAESFCESKFLNSSVMR 1201
Query: 510 QARDIRDQLAGLL 522
R+ R + LL
Sbjct: 1202 MMRERRVEFGMLL 1214
>AT5G14900.1 | Symbols: | helicase associated (HA2)
domain-containing protein | chr5:4822676-4823581 REVERSE
LENGTH=301
Length = 301
Score = 202 bits (513), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 108/281 (38%), Positives = 167/281 (59%), Gaps = 10/281 (3%)
Query: 357 TNLANVVLTLKSLGIHDLLHFDFMDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAE 416
TNLAN VLTLK L + +L+ FD +D P LTK G M+E
Sbjct: 2 TNLANTVLTLKGLSVKNLVRFDLIDSPAPDTLARALDDLYHLGALDDDCNLTKTGEMMSE 61
Query: 417 FPLDPMLSKMIVASEKYKCSDDIISVAAMLSVGNSIFYRPK-DKQVHADNARMNFHTGNV 475
FPLDP ++KM++ S ++ CS++I+S++AMLSV N F RP+ + Q AD A+ +F +
Sbjct: 62 FPLDPQMAKMLIVSPQFNCSNEILSISAMLSVPNC-FIRPRGEAQKAADEAKSSFAHID- 119
Query: 476 GDHIALLKVYNSWKETNYSTQWCYENYIQVRSMKQARDIRDQLAGLLERVEIELTS---N 532
GDH+ LL +++++ + N WC +I R+MK A +R+QL ++ R +I+L S N
Sbjct: 120 GDHLTLLNLFHAFLQNNQDPNWCCTKFINYRAMKSAVSVREQLVRIMLRFQIKLCSPDFN 179
Query: 533 PNDLDA-VKKSITSGFFPHSARLQKNGSYRTV--KHPQTVHIHPSSGLAQILPRWVVYYE 589
D ++K++ +G+F A L++ G Y T K Q VH+HPS+ L P WVVY E
Sbjct: 180 SRDYYVNIRKALLAGYFMQVAHLERTGHYLTFRDKDDQVVHLHPSNCLDHK-PEWVVYNE 238
Query: 590 LVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVEDPTSKKM 630
V T++ ++R VT ++ EWLV++APHYY+L + +K++
Sbjct: 239 YVFTSRNFIRTVTHIRGEWLVDVAPHYYKLANFPSSEAKRV 279
>AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protein |
chr1:12099738-12104108 REVERSE LENGTH=1237
Length = 1237
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 212/439 (48%), Gaps = 65/439 (14%)
Query: 239 AELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKT 298
+L + P+YA L Q ++FE + R VV+ATN+AETSLTI GIKYV+D G K+K
Sbjct: 645 GKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVKN 704
Query: 299 YNPRTGMESLLITPISKASAMQRAGRSGRTGPGKCFRLYTAYNFHNDLDDNTVPEIQRTN 358
Y+ +TGMES + IS+ASA QRAGR+GRTGPG C+RLY++ F N +++++PEI +
Sbjct: 705 YDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKVP 764
Query: 359 LANVVLTLKSLGIHDLLHFDFMDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFP 418
+ V+L +KS+ I + +F F PP G LT +G+ M+ +P
Sbjct: 765 VDGVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKALEALDSNGGLTPLGKAMSHYP 824
Query: 419 LDPMLSKMIVA-------SEKYKCSDDIIS----VAAMLSVGNSIFY------------- 454
+ P S+M++ + Y ++ I+ A LS+ N +
Sbjct: 825 MSPRHSRMLLTVIQMLKETRNYSRANLILGYAVAAVAALSLPNPLIMEFEGEKKNESKDA 884
Query: 455 ----------RPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWKETNYSTQWCYENYIQ 504
R KD++ AR F + D + + +S++ + +C N +
Sbjct: 885 DKTVKQEDKQRKKDRKEKIKAARDRFSNPS-SDALTVAYALHSFEVSENGMGFCEANGLH 943
Query: 505 VRSMKQARDIRDQLA--------------------GLLERVE--IELTSNP--------N 534
+++M + ++DQL G ++ VE +T++ N
Sbjct: 944 LKTMDEMSKLKDQLLRLVFNCCKPSETEDSFSWTHGTIQDVEKSWRITTSTSSKTPLLQN 1003
Query: 535 DLDAVKKSITSGFFPHSARLQKNGSYRTVKHPQTVHIHPSSGLAQILPRWVVYYELVLTT 594
+ + + ++I +G+ AR + Y+ + V +H S L P +VY EL+LT
Sbjct: 1004 EEELLGEAICAGWADRVARKTRATEYQACAVQEPVFLHRWSSLINSAPELLVYSELLLTN 1063
Query: 595 KEYMRQVTELKPEWLVEIA 613
+ YM T ++PEWLV+ A
Sbjct: 1064 RPYMHGATRVRPEWLVKHA 1082
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/268 (36%), Positives = 152/268 (56%), Gaps = 34/268 (12%)
Query: 7 ELLQAVQDHQVLVIVGETGSGKTTQIPQYLHEAGY------TKRGMIACTQPXXXXXXXX 60
E+++A+ H ++I G+TG GKTTQ+PQ+L+EAG+ ++ G+I TQP
Sbjct: 249 EIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSGIIGITQPRRVAVLAT 308
Query: 61 XXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVMVDE 120
E+GV+LG EVG+ +R++ E + +K+MTDG+LLRE + L YSV+++DE
Sbjct: 309 AKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQNDFLLRRYSVIILDE 368
Query: 121 AHERTLSTDILFGLVKDISRFRPD-----------------------LKLLISSATLDAE 157
AHER+L+TDIL G++ + + R + LKL++ SATL E
Sbjct: 369 AHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQSGGTVTSECQITPLKLILMSATLRVE 428
Query: 158 KFSD----YFDSAPIFKIPGRRYPVEINFTKAPE-ADYLDAAIVTSLQIHVTQPPGDILV 212
F + + P+ ++P R+YPV I+F+K E DY+ A + IH P G ILV
Sbjct: 429 DFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIGEAYKKVMSIHKKLPQGGILV 488
Query: 213 FLTGQEEIETAEEILKHRTRGLGTKIAE 240
F+TGQ E++ E L+ ++ L + A+
Sbjct: 489 FVTGQREVDYLCEKLRKSSKELVVQAAK 516
>AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:88847-94635 REVERSE LENGTH=1113
Length = 1113
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 211/421 (50%), Gaps = 23/421 (5%)
Query: 207 PGDILVFLTGQEEIETAEEILKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPEGA 266
PG IL+FLTG ++I + +E L+ + L+ C + ++ T Q IFE G
Sbjct: 498 PGGILIFLTGWDDISSLKEKLQIHPIFGNPDLVMLLAC--HGSMETFEQRLIFEEPASGV 555
Query: 267 RKVVLATNIAETSLTIDGIKYVIDPGFCKMKTYNPRTGMESLLITPISKASAMQRAGRSG 326
RK+VLATNIAETS+TI+ + +VID G K +Y+ LL + ISK SA QR GR+G
Sbjct: 556 RKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAG 615
Query: 327 RTGPGKCFRLYTAYNFHNDLDDNTVPEIQRTNLANVVLTLKSLGIHDLLHF--DFMDPPP 384
R PG+C+ LY ++ + +PEI RT L ++ L +KSL + + F + P
Sbjct: 616 RVRPGQCYHLYPKC-VYDAFAEYQLPEILRTPLHSLCLQIKSLNLGSISEFLSRALQSPE 674
Query: 385 XXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASEKYKCSDDIISVAA 444
+LT +GR +++ P++P L KM++ C D I++VAA
Sbjct: 675 LLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLILGAILGCLDPILTVAA 734
Query: 445 MLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWKETNYST---QWCYEN 501
LSV + F P+DK+ A+ A+ F + DH+AL++ Y WK+ + +C++N
Sbjct: 735 GLSVRDP-FLTPQDKKDLAEAAKSQFSRDH-SDHLALVRAYEGWKKAEEESAVYDYCWKN 792
Query: 502 YIQVRSMKQARDIRDQLAGLLERVEIELTSNP-------NDLDAVKKSITSGFFPHSARL 554
++ ++S++ +R + LL+ + + NP ND + + I G +P +
Sbjct: 793 FLSIQSLRAIDSLRKEFFSLLKDTGL-IDGNPSICNSEGNDANLTRAVICYGMYPGICSV 851
Query: 555 ---QKNGSYRTVKHPQTVHIHPSSGL--AQILPRWVVYYELVLTTKEYMRQVTELKPEWL 609
+++ S +T++ Q + S +I W+V+ E + ++R T L
Sbjct: 852 VHNERSFSLKTMEDGQVLLYSNSENARETKIPYPWLVFNEKIKVNSVFLRDSTACSDSTL 911
Query: 610 V 610
+
Sbjct: 912 I 912
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 105/185 (56%), Gaps = 4/185 (2%)
Query: 2 YPYRDELLQAVQDHQVLVIVGETGSGKTTQIPQYLHEAGY-TKRGM---IACTQPXXXXX 57
+ R +L A+ +QV+VI GETG GKTTQIPQ++ E+ RG I CTQP
Sbjct: 223 FKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSSIICTQPRRISA 282
Query: 58 XXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVM 117
E G +LG VGY +R E T L + T G+LLR L + +L + V+
Sbjct: 283 MSVSERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVDRNLRGVTHVI 342
Query: 118 VDEAHERTLSTDILFGLVKDISRFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYP 177
VDE HER ++ D L ++KD+ R +LKL++ SATLDAE FS YF A + IPG YP
Sbjct: 343 VDEIHERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSYFGGAGVIYIPGFTYP 402
Query: 178 VEINF 182
V +F
Sbjct: 403 VRSHF 407
>AT1G58060.1 | Symbols: | RNA helicase family protein |
chr1:21489480-21501775 REVERSE LENGTH=1459
Length = 1459
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 222/486 (45%), Gaps = 71/486 (14%)
Query: 189 DYLDAAIVTSLQIHV--TQPPGDILVFLTGQEEIETAEEILKHRTRGLGTKIAELIICPI 246
D +D ++ L H+ T G IL+FL G EI ++L R G L+ P+
Sbjct: 895 DRIDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWLL--PL 952
Query: 247 YANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKTYNPRTGME 306
++++ + Q K+F P+G RKV+ ATNIAETS+TID + YVID G K YNP+ +
Sbjct: 953 HSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLS 1012
Query: 307 SLLITPISKASAMQRAGRSGRTGPGKCFRLYTAYNFHNDLDDNTVPEIQRTNLANVVLTL 366
S++ IS+A+A QR GR+GR PG CF LYT Y F + VPE+ R L + L +
Sbjct: 1013 SMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQI 1072
Query: 367 KSLGIHDLLHF--DFMDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLS 424
K LG+ + F ++PP ELT +G +A+ P+D ++
Sbjct: 1073 KLLGLGHIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIG 1132
Query: 425 KMIVASEKYKCSDDIISVAAMLSVGNSIFYRPKDKQVHADNARMNFHTGN---------- 474
KM++ + C I+S+AA LS + Y PKD++ + D ++ + N
Sbjct: 1133 KMLLYGGIFGCLSPILSIAAFLSYKSPFIY-PKDEKQNVDRVKLALLSDNGVSSSDLNNN 1191
Query: 475 --VGDHIALLKVYNSW------KETNYSTQWCYENYIQVRSMKQARDIRDQLAGLL---- 522
DH+ ++ Y+ W + + ++C ++ M+ RD+R Q LL
Sbjct: 1192 DRQSDHLLMMVAYDKWVKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLLADIG 1251
Query: 523 ---------------ERVEIELT--SNPNDL-----DAVKKSITSGFFPHSA-------- 552
E +++ + + P ++ + VK + +G +P+ A
Sbjct: 1252 LINLPKTGEFSGRKKENLDVWFSDPTQPFNMYSQQPEVVKAILCAGLYPNIAANDKGITE 1311
Query: 553 ----RLQKNG----SYRT-VKHPQTVHIHPS---SGLAQILPRWVVYYELVLTTKEYMRQ 600
L K G SY + VHIHPS S ++V+ E V T K Y+R
Sbjct: 1312 TTFNSLTKQGNQTKSYSAWYDGRREVHIHPSSINSNFKAFQNPFLVFLEKVETNKVYLRD 1371
Query: 601 VTELKP 606
T + P
Sbjct: 1372 TTIVSP 1377
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 105/193 (54%), Gaps = 16/193 (8%)
Query: 5 RDELLQAVQDHQVLVIVGETGSGKTTQIPQYLHE----AGYTKRGMIACTQPXXXXXXXX 60
++ +LQ +++ VLV+ GETGSGKTTQ+PQ++ + +G+ I CTQP
Sbjct: 620 KNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRRIAAISV 679
Query: 61 XXXXXQEM-----GVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSV 115
E G+ VGY +R E S+KT L + T G+LLR+ G+ L +
Sbjct: 680 AQRVADERCESSPGLD-DSLVGYQVRLESARSDKTRLLFCTTGILLRKLAGDRTLNDVTH 738
Query: 116 VMVDEAHERTLSTDILFGLVKD-ISRFRPD-----LKLLISSATLDAEKFSDYFDSAPIF 169
++VDE HER+L D L ++K I + D LK+++ SAT+DA+ FS YF P+
Sbjct: 739 IIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDADLFSRYFGHCPVI 798
Query: 170 KIPGRRYPVEINF 182
GR +PV +F
Sbjct: 799 TAQGRTHPVTTHF 811
>AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:17989517-17995169 REVERSE LENGTH=1206
Length = 1206
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 143/483 (29%), Positives = 242/483 (50%), Gaps = 33/483 (6%)
Query: 146 KLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTSLQIHVT- 204
K LISSA DA + +D+ G + + + D + ++ ++ H+
Sbjct: 525 KSLISSAVEDALEAADF---------KGYNFRTRDSLS-CWSPDSIGFNLIENVLCHIVK 574
Query: 205 -QPPGDILVFLTGQEEIETAEEILK-HRTRGLGTKIAELIICPIYANLPTELQAKIFEPT 262
+ PG +LVF+TG ++I + + L+ H G K+ L+ C + ++ + Q IF+
Sbjct: 575 GERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVL-LLAC--HGSMASSEQRLIFDRP 631
Query: 263 PEGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKTYNPRTGMESLLITPISKASAMQRA 322
PEG RK+VLATN+AETS+TI+ + YVID G K +Y+ LL + ISKA+A QR
Sbjct: 632 PEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRR 691
Query: 323 GRSGRTGPGKCFRLYTAYNFHNDLDDNTVPEIQRTNLANVVLTLKSLGIHDLLHF--DFM 380
GR+GR PG+C+ LY + D PE+ RT L ++ L +KSLG+ + F +
Sbjct: 692 GRAGRVMPGECYHLYPRC-VYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRAL 750
Query: 381 DPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASEKYKCSDDII 440
PP LT +G+ ++ P++P L KM++ + C D ++
Sbjct: 751 QPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVM 810
Query: 441 SVAAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWKE---TNYSTQW 497
+V A LSV + F P DK+ A+ AR F + DH+ L++ YN WK+ T+ +
Sbjct: 811 TVVAGLSVRDP-FLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSGYDY 869
Query: 498 CYENYIQVRSMKQARDIRDQLAGLLERV----EIELTSN-PNDLDAVKKSITSGFFPHSA 552
C++N++ +++K +R Q LL+ IE S +D V+ I +G FP
Sbjct: 870 CWKNFLSSQTLKAMDSMRKQFFNLLKEASLIDNIEGCSKLSHDEHLVRAIICAGMFPGVC 929
Query: 553 RL---QKNGSYRTVKHPQTVHIHPS-SGLAQILPR-WVVYYELVLTTKEYMRQVTELKPE 607
+ +K+ + +T++ Q + S +G ++P W+V+ + V ++R T +
Sbjct: 930 SVVNKEKSITLKTMEDGQVLLYSSSVNGNVPMIPFPWLVFNDKVKVNSVFLRDSTAVSDS 989
Query: 608 WLV 610
L+
Sbjct: 990 VLL 992
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 113/197 (57%), Gaps = 8/197 (4%)
Query: 2 YPYRDELLQAVQDHQVLVIVGETGSGKTTQIPQYLHEAGY-TKRGM---IACTQPXXXXX 57
Y +D LL+A+ +QV+V+ GETG GKTTQ+PQY+ E+ RG I CTQP
Sbjct: 302 YKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRRISA 361
Query: 58 XXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVM 117
E G ++G VGY +R E T L + T G+LLR L + L + V+
Sbjct: 362 ISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVV 421
Query: 118 VDEAHERTLSTDILFGLVKDISRFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYP 177
VDE HER ++ D L ++KD+ RPDLKL++ SATL+AE FS YF AP IPG YP
Sbjct: 422 VDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHIPGFTYP 481
Query: 178 VEINFTKAPEADYLDAA 194
V +F + DYL+ +
Sbjct: 482 VRAHFLE----DYLETS 494
>AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:17989670-17995169 REVERSE LENGTH=1197
Length = 1197
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 143/483 (29%), Positives = 242/483 (50%), Gaps = 33/483 (6%)
Query: 146 KLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTSLQIHVT- 204
K LISSA DA + +D+ G + + + D + ++ ++ H+
Sbjct: 525 KSLISSAVEDALEAADF---------KGYNFRTRDSLS-CWSPDSIGFNLIENVLCHIVK 574
Query: 205 -QPPGDILVFLTGQEEIETAEEILK-HRTRGLGTKIAELIICPIYANLPTELQAKIFEPT 262
+ PG +LVF+TG ++I + + L+ H G K+ L+ C + ++ + Q IF+
Sbjct: 575 GERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVL-LLAC--HGSMASSEQRLIFDRP 631
Query: 263 PEGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKTYNPRTGMESLLITPISKASAMQRA 322
PEG RK+VLATN+AETS+TI+ + YVID G K +Y+ LL + ISKA+A QR
Sbjct: 632 PEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRR 691
Query: 323 GRSGRTGPGKCFRLYTAYNFHNDLDDNTVPEIQRTNLANVVLTLKSLGIHDLLHF--DFM 380
GR+GR PG+C+ LY + D PE+ RT L ++ L +KSLG+ + F +
Sbjct: 692 GRAGRVMPGECYHLYPRC-VYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRAL 750
Query: 381 DPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASEKYKCSDDII 440
PP LT +G+ ++ P++P L KM++ + C D ++
Sbjct: 751 QPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVM 810
Query: 441 SVAAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWKE---TNYSTQW 497
+V A LSV + F P DK+ A+ AR F + DH+ L++ YN WK+ T+ +
Sbjct: 811 TVVAGLSVRDP-FLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSGYDY 869
Query: 498 CYENYIQVRSMKQARDIRDQLAGLLERV----EIELTSN-PNDLDAVKKSITSGFFPHSA 552
C++N++ +++K +R Q LL+ IE S +D V+ I +G FP
Sbjct: 870 CWKNFLSSQTLKAMDSMRKQFFNLLKEASLIDNIEGCSKLSHDEHLVRAIICAGMFPGVC 929
Query: 553 RL---QKNGSYRTVKHPQTVHIHPS-SGLAQILPR-WVVYYELVLTTKEYMRQVTELKPE 607
+ +K+ + +T++ Q + S +G ++P W+V+ + V ++R T +
Sbjct: 930 SVVNKEKSITLKTMEDGQVLLYSSSVNGNVPMIPFPWLVFNDKVKVNSVFLRDSTAVSDS 989
Query: 608 WLV 610
L+
Sbjct: 990 VLL 992
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 113/197 (57%), Gaps = 8/197 (4%)
Query: 2 YPYRDELLQAVQDHQVLVIVGETGSGKTTQIPQYLHEAGY-TKRGM---IACTQPXXXXX 57
Y +D LL+A+ +QV+V+ GETG GKTTQ+PQY+ E+ RG I CTQP
Sbjct: 302 YKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRRISA 361
Query: 58 XXXXXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVM 117
E G ++G VGY +R E T L + T G+LLR L + L + V+
Sbjct: 362 ISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVV 421
Query: 118 VDEAHERTLSTDILFGLVKDISRFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYP 177
VDE HER ++ D L ++KD+ RPDLKL++ SATL+AE FS YF AP IPG YP
Sbjct: 422 VDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHIPGFTYP 481
Query: 178 VEINFTKAPEADYLDAA 194
V +F + DYL+ +
Sbjct: 482 VRAHFLE----DYLETS 494
>AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase |
chr1:2040567-2047333 FORWARD LENGTH=1576
Length = 1576
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/383 (31%), Positives = 189/383 (49%), Gaps = 24/383 (6%)
Query: 191 LDAAIVTSL--QIHVTQPPGDILVFLTGQEEI-ETAEEILKHRTRGLGTKIAELIICPIY 247
+D ++ L +I G ILVFL G EEI +T E++L R A+ II ++
Sbjct: 557 VDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDR---FFAHSAKFIILCLH 613
Query: 248 ANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKTYNPRTGMES 307
+ +P E Q K+F P G RK+VLATNIAE+++TID + YVID G K K+Y+P + +
Sbjct: 614 SRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVST 673
Query: 308 LLITPISKASAMQRAGRSGRTGPGKCFRLYTAYNFHNDLDDNTVPEIQRTNLANVVLTLK 367
L + +SKA+A QRAGR+GR G C+ LY+ + L + VPE+ R + + L +K
Sbjct: 674 LQSSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAAS-LPEYRVPEVMRMPVDELCLQVK 732
Query: 368 SL----GIHDLLHFDFMDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPML 423
L ++D L MDPP ELT++G++ + P+ P +
Sbjct: 733 MLDPNCNVNDFLQ-KLMDPPVAQSIENALIILKDIGALTPEEELTELGQKFGQLPVHPRI 791
Query: 424 SKMIVASEKYKCSDD--IISVAAMLSVGNSIFYRPKD-KQVHADNARMNFHTGNVGDHIA 480
SKMI + C D I++ AA ++ P D K+ A + G+ DH+A
Sbjct: 792 SKMIYFAILVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAAKHELASLYGDHSDHLA 851
Query: 481 LLKVYNSWKETNYSTQ---WCYENYIQVRSMKQARDIRDQLAGLLERVEIELTSNPN--- 534
+ + WK S Q +C + +I MK+ D+ +L G L R + +S+ N
Sbjct: 852 TVAAFQCWKNAKASGQAKEFCSKYFISQVVMKRLDDLCRKLQGELNRHGVIPSSSSNCSL 911
Query: 535 ---DLDAVKKSITSGFFPHSARL 554
D ++ I G +P R+
Sbjct: 912 NAHDPGILRAVIAVGLYPMLGRM 934
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 108/188 (57%), Gaps = 12/188 (6%)
Query: 4 YRDELLQAVQDHQVLVIVGETGSGKTTQIPQYLHEAGYTKRG---MIACTQPXXXXXXXX 60
+RD ++ AV+ +QV++I GETG GKTTQ+PQYL + + + I CTQP
Sbjct: 222 FRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKKEACKIICTQPRRISAISV 281
Query: 61 XXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREFLGE------PDLASYS 114
E G +G VGY +R + ++ + + T+G+LLR +G+ PD+
Sbjct: 282 SDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLIGKGVNSSVPDITH-- 339
Query: 115 VVMVDEAHERTLSTDILFGLVKDISRFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGR 174
++VDE HER +D + +++D+ P L+L++ SATLDAE+FS+YF P+ ++PG
Sbjct: 340 -IIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYFGGCPVVRVPGF 398
Query: 175 RYPVEINF 182
YPV F
Sbjct: 399 TYPVRTFF 406
>AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:1428796-1434516 FORWARD LENGTH=1161
Length = 1161
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 224/433 (51%), Gaps = 24/433 (5%)
Query: 189 DYLDAAIVTSLQIHVTQP--PGDILVFLTGQEEIET-AEEILKHRTRGLGTKIAELIICP 245
D + ++ ++ H+ + PG +LVFLTG ++I + +++I H G ++ L++C
Sbjct: 519 DCIGFNLIEAVLCHICRKERPGAVLVFLTGWDDIRSLSDQIKAHPLLGDPNRVL-LLMC- 576
Query: 246 IYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKTYNPRTGM 305
+ ++ T Q IFE P RK+VLATN+AE S+TI+ + +V+D G K TY+
Sbjct: 577 -HGSMATAEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNT 635
Query: 306 ESLLITPISKASAMQRAGRSGRTGPGKCFRLYTAYNFHNDLDDNTVPEIQRTNLANVVLT 365
LL + IS+ASA QR GR+GR PG+C+ LY ++ + +PE+ RT L ++ L
Sbjct: 636 PCLLPSWISQASARQRRGRAGRLFPGECYHLYPKC-VYDAFAEYQLPELLRTPLNSLCLQ 694
Query: 366 LKSLGIHDLLHF--DFMDPPPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPML 423
+KSL + + F + P LT +G+ ++ P+DP L
Sbjct: 695 IKSLQVESIAEFLSAALQAPESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDPKL 754
Query: 424 SKMIVASEKYKCSDDIISVAAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLK 483
KM++ ++C D I+++ + LSV + F P+DK+ A +A++ F + DH+AL++
Sbjct: 755 GKMLIMGAIFRCFDPILTIVSGLSVRDP-FLLPQDKKDLALSAKLRFSAKDYSDHMALVR 813
Query: 484 VYNSWKET---NYSTQWCYENYIQVRSMKQARDIRDQLAGLLER---VEIELTSN---PN 534
+ WK+ + ++C+ N++ ++++ +R Q +L+ V +L N +
Sbjct: 814 AFEGWKDAEREGSAYEFCWRNFLSAQTLQAIHSLRKQFNYILKEAGLVHDDLALNNKLSH 873
Query: 535 DLDAVKKSITSGFFPHSARL---QKNGSYRTVKHPQ-TVHIHPSSGLAQILPR-WVVYYE 589
+ V+ I SG FP A + + + S++T+ Q +++ + + +P W+V+ E
Sbjct: 874 NQSLVRAVICSGLFPGIASVVHRETSMSFKTMDDGQVSLYANSVNSRFPTIPYPWLVFGE 933
Query: 590 LVLTTKEYMRQVT 602
V +R T
Sbjct: 934 KVKVNAVLIRDST 946
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 109/182 (59%), Gaps = 4/182 (2%)
Query: 5 RDELLQAVQDHQVLVIVGETGSGKTTQIPQYLHEAGY-TKRGM---IACTQPXXXXXXXX 60
++ LLQA+ +QV+V+ GETG GKTTQ+PQY+ E+ + RG I CTQP
Sbjct: 266 KERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGRGAFCNIICTQPRRISAMAV 325
Query: 61 XXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVMVDE 120
E G LG VG+ +R E + T L + T G+LLR L + +L + V VDE
Sbjct: 326 SERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTSGILLRRLLSDRNLNGVTHVFVDE 385
Query: 121 AHERTLSTDILFGLVKDISRFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEI 180
HER ++ D L ++K++ RPDL+L++ SATL+AE FS+Y+ AP IPG +PV+
Sbjct: 386 IHERGMNEDFLIIVLKELLPRRPDLRLVLMSATLNAELFSNYYGGAPTIHIPGFTHPVKA 445
Query: 181 NF 182
+F
Sbjct: 446 HF 447
>AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissue
and tapetum | chr2:13120585-13126635 REVERSE LENGTH=1299
Length = 1299
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 176/364 (48%), Gaps = 22/364 (6%)
Query: 208 GDILVFLTGQEEI-ETAEEILKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPEGA 266
G ILVFL G ++I +T + +L++ K IIC +++ +P Q K+F P G
Sbjct: 552 GAILVFLPGWDDINKTRQRLLENPFFADSAKFD--IIC-LHSMVPAGEQKKVFNRPPPGC 608
Query: 267 RKVVLATNIAETSLTIDGIKYVIDPGFCKMKTYNPRTGMESLLITPISKASAMQRAGRSG 326
RK+VLATNIAE+++TID + YVID G K K+Y+P + +L + +SKA+A QR GR+G
Sbjct: 609 RKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQRQGRAG 668
Query: 327 RTGPGKCFRLYTAYNFHNDLDDNTVPEIQRTNLANVVLTLKSLG----IHDLLHFDFMDP 382
R PG C+ LY+ + + D VPEI+R + + L +K L +D L +DP
Sbjct: 669 RCQPGICYHLYSRLRAAS-MPDFKVPEIKRMPVEELCLQVKILDPNCKTNDFLQ-KLLDP 726
Query: 383 PPXXXXXXXXXXXXXXXXXXXXGELTKVGRRMAEFPLDPMLSKMIVASEKYKCSDDIISV 442
P ELT++G + P+ P++SKM+ + C D +++
Sbjct: 727 PVDQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPLISKMLFFAVLVNCLDPALTL 786
Query: 443 AAMLSVGN--SIFYRPKDKQVHADNARMNFH-TGNVGDHIALLKVYNSWKET---NYSTQ 496
A ++ P ++Q A G DH+A++ + WK S +
Sbjct: 787 ACAADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSDHLAVVAAFECWKNAKGRGLSAE 846
Query: 497 WCYENYIQVRSMKQARDIRDQLAGLLERVEI------ELTSNPNDLDAVKKSITSGFFPH 550
+C + ++ +MK +R QL L+R I + N D ++ + G +P
Sbjct: 847 FCSQYFVSPSAMKMLDQMRSQLESELKRHGIIPNDISSCSQNSRDPGILRAVLAVGLYPM 906
Query: 551 SARL 554
RL
Sbjct: 907 VGRL 910
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 106/181 (58%), Gaps = 6/181 (3%)
Query: 4 YRDELLQAVQDHQVLVIVGETGSGKTTQIPQYLHEAGYTKR---GMIACTQPXXXXXXXX 60
++D + AV+ +QV++I GETG GKTTQ+PQYL + ++ + I CTQP
Sbjct: 192 FKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIVCTQPRRISAMSV 251
Query: 61 XXXXXQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVV---M 117
E G +G +GY +R + + + + T+G+LLR +G+ ++S S + +
Sbjct: 252 SERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKGSVSSVSDITHII 311
Query: 118 VDEAHERTLSTDILFGLVKDISRFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYP 177
VDE HER +D + +++D+ P L+L++ SATLDAE+FS YF P+ ++PG YP
Sbjct: 312 VDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGYFGGCPVVRVPGFTYP 371
Query: 178 V 178
V
Sbjct: 372 V 372
>AT2G47680.1 | Symbols: | zinc finger (CCCH type) helicase family
protein | chr2:19545828-19550871 REVERSE LENGTH=1015
Length = 1015
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 190/411 (46%), Gaps = 54/411 (13%)
Query: 5 RDELLQAVQDHQVLVIVGETGSGKTTQIPQYLHEAGYTKRGMIACTQPXXXXXXXXXXXX 64
+ ++ + +++V +IVGE G GK++Q+PQ+L EA I CTQP
Sbjct: 32 KRRIIDKILENRVTLIVGEPGCGKSSQVPQFLLEANMAP---ILCTQPRRFAVVAVAKMV 88
Query: 65 XQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREFLGEP-DLASYSVVMVDEAHE 123
+ LG E+GY I +E + + + T G+LL E L + + Y V+++DE HE
Sbjct: 89 AKSRNSDLGGEIGYHIGHSKILTEGSKILFKTAGVLLDEMLDKGLNALKYKVIILDEVHE 148
Query: 124 RTLSTDILFGLVKDISRFRPDLKLLISSATLDAEKFSDYF------DSAPIFKIPG---- 173
R++ +D++ VK DL++++ SAT D ++ DYF + + IP
Sbjct: 149 RSVESDLVLVCVKQFLMKNNDLRVVLMSATADITRYRDYFKELGRGERVEVVAIPSPDQR 208
Query: 174 ----RR--YPVEI-----------NFTKAPEADYLDAAIVTSLQ---------IHVTQP- 206
RR Y ++ + P D I LQ IH +P
Sbjct: 209 TIFQRRVLYLEQVAGLLGVSSDLSAYCPGPSPSSADTEIKPELQNLIHDLILYIHEKEPD 268
Query: 207 -PGDILVFLTGQEEIETAEEILKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPEG 265
ILVFL +E + L A + ++ ++ TE QA
Sbjct: 269 IEKSILVFLPTYYSLE-------QQYHQLEPFFASFEVHILHRSIDTE-QALAAMKICRS 320
Query: 266 ARKVVLATNIAETSLTIDGIKYVIDPGFCKMKTYNPRTGMESLLITPISKASAMQRAGRS 325
RKV+LATNIAE+S+TI + YVID ++P +++ + +S++ A QR GR+
Sbjct: 321 RRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDPSRKRDAVQLVWVSRSQAEQRRGRT 380
Query: 326 GRTGPGKCFRLYTAYNFHNDLDDNTVPEIQRTNLANVVLTL---KSLGIHD 373
GRT G+ +RL + F N L+++ P I + +L VL + +S I+D
Sbjct: 381 GRTCDGEVYRLVPS-AFFNKLEEHEPPSILKLSLRQQVLHICCTESRAIND 430