Miyakogusa Predicted Gene

Lj6g3v1055600.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1055600.1 Non Chatacterized Hit- tr|I1NE40|I1NE40_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,92.88,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.58987.1
         (331 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 | ...   486   e-138
AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 | ...   486   e-138
AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 | ...   476   e-135
AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 | ...   476   e-135
AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 | ...   476   e-135

>AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 |
           chr3:3761758-3770290 REVERSE LENGTH=1114
          Length = 1114

 Score =  486 bits (1252), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 233/317 (73%), Positives = 277/317 (87%), Gaps = 1/317 (0%)

Query: 15  VGQLREVSNKVHNGELKLFLEVECGMDSHPIAPPDKTKDDILLFFKLYDPEKEELRYVGR 74
           VGQ+RE SNK +N ELKLFLE+E G D  PI PP+KT +DILLFFKLYDPE   LRYVGR
Sbjct: 650 VGQIREASNKANNAELKLFLEIERGPDDLPIPPPEKTSEDILLFFKLYDPENAVLRYVGR 709

Query: 75  LFVKCTGKPSEILTKLNEMAGYDPEEDIALYEEIKFEPNVMCEPIDKKATFRASQLEDGD 134
           L VK + KP +I+ +LN+MAG+ P+E+I L+EEIKFEP VMCE IDKK +FR  Q+EDGD
Sbjct: 710 LMVKSSSKPMDIVGQLNKMAGFAPDEEIELFEEIKFEPCVMCEQIDKKTSFRLCQIEDGD 769

Query: 135 IVCFQKAPPVDGEEHFRYPDVPSYLEYVHNRQVVHFRSLDRPKEDDFFLEMSRLYTYDDV 194
           I+C+QK   ++ E  FRYPDVPS+LEYV NR++V FR+L++PKED+F +E+S+L+TYDDV
Sbjct: 770 IICYQKPLSIE-ESEFRYPDVPSFLEYVQNRELVRFRTLEKPKEDEFTMELSKLHTYDDV 828

Query: 195 VEKVAQQLGLDDPSKIRLTPHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVL 254
           VE+VA++LGLDDPSK+RLT HNCYSQQPKPQPIKYRGV+HLSDMLVHYNQTSDILYYEVL
Sbjct: 829 VERVAEKLGLDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVL 888

Query: 255 DIPLPELQGLKTLKVAFHYATKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHPNAELRL 314
           DIPLPELQGLKTLKVAFH ATKDEV+ H IRLPKQSTVGDV+++LKTKVELSH +AELRL
Sbjct: 889 DIPLPELQGLKTLKVAFHSATKDEVIIHNIRLPKQSTVGDVINELKTKVELSHQDAELRL 948

Query: 315 LEVFYHKIYKVFPPNEK 331
           LEVF+HKIYK+FP  E+
Sbjct: 949 LEVFFHKIYKIFPSTER 965


>AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 |
           chr3:3761758-3770290 REVERSE LENGTH=1115
          Length = 1115

 Score =  486 bits (1252), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 233/317 (73%), Positives = 277/317 (87%), Gaps = 1/317 (0%)

Query: 15  VGQLREVSNKVHNGELKLFLEVECGMDSHPIAPPDKTKDDILLFFKLYDPEKEELRYVGR 74
           VGQ+RE SNK +N ELKLFLE+E G D  PI PP+KT +DILLFFKLYDPE   LRYVGR
Sbjct: 651 VGQIREASNKANNAELKLFLEIERGPDDLPIPPPEKTSEDILLFFKLYDPENAVLRYVGR 710

Query: 75  LFVKCTGKPSEILTKLNEMAGYDPEEDIALYEEIKFEPNVMCEPIDKKATFRASQLEDGD 134
           L VK + KP +I+ +LN+MAG+ P+E+I L+EEIKFEP VMCE IDKK +FR  Q+EDGD
Sbjct: 711 LMVKSSSKPMDIVGQLNKMAGFAPDEEIELFEEIKFEPCVMCEQIDKKTSFRLCQIEDGD 770

Query: 135 IVCFQKAPPVDGEEHFRYPDVPSYLEYVHNRQVVHFRSLDRPKEDDFFLEMSRLYTYDDV 194
           I+C+QK   ++ E  FRYPDVPS+LEYV NR++V FR+L++PKED+F +E+S+L+TYDDV
Sbjct: 771 IICYQKPLSIE-ESEFRYPDVPSFLEYVQNRELVRFRTLEKPKEDEFTMELSKLHTYDDV 829

Query: 195 VEKVAQQLGLDDPSKIRLTPHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVL 254
           VE+VA++LGLDDPSK+RLT HNCYSQQPKPQPIKYRGV+HLSDMLVHYNQTSDILYYEVL
Sbjct: 830 VERVAEKLGLDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVL 889

Query: 255 DIPLPELQGLKTLKVAFHYATKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHPNAELRL 314
           DIPLPELQGLKTLKVAFH ATKDEV+ H IRLPKQSTVGDV+++LKTKVELSH +AELRL
Sbjct: 890 DIPLPELQGLKTLKVAFHSATKDEVIIHNIRLPKQSTVGDVINELKTKVELSHQDAELRL 949

Query: 315 LEVFYHKIYKVFPPNEK 331
           LEVF+HKIYK+FP  E+
Sbjct: 950 LEVFFHKIYKIFPSTER 966


>AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 |
           chr5:2019545-2027834 REVERSE LENGTH=1116
          Length = 1116

 Score =  476 bits (1226), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 235/317 (74%), Positives = 273/317 (86%), Gaps = 2/317 (0%)

Query: 15  VGQLREVSNKVHNGELKLFLEVECGMDSHPIAPPDKTKDDILLFFKLYDPEKEELRYVGR 74
           VGQ+RE SNK +  ELKLFLEVE  +D  PI PP+K+K+DILLFFKLYDPEK  L Y GR
Sbjct: 653 VGQIREASNKANTAELKLFLEVE-HLDLRPIPPPEKSKEDILLFFKLYDPEKAVLSYAGR 711

Query: 75  LFVKCTGKPSEILTKLNEMAGYDPEEDIALYEEIKFEPNVMCEPIDKKATFRASQLEDGD 134
           L VK + KP +I  KLNEM G+ P+E+I L+EEIKFEP VMCE +DKK +FR  Q+EDGD
Sbjct: 712 LMVKSSSKPMDITGKLNEMVGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGD 771

Query: 135 IVCFQKAPPVDGEEHFRYPDVPSYLEYVHNRQVVHFRSLDRPKEDDFFLEMSRLYTYDDV 194
           I+CFQK P V+ E    YP VPS+LEYV NRQ+V FR+L++PKED+F LE+S+ +TYDDV
Sbjct: 772 IICFQK-PLVNKEIECLYPAVPSFLEYVQNRQLVRFRALEKPKEDEFVLELSKQHTYDDV 830

Query: 195 VEKVAQQLGLDDPSKIRLTPHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVL 254
           VEKVA++LGLDDPSK+RLT HNCYSQQPKPQPIKYRGV+HLSDMLVHYNQTSDILYYEVL
Sbjct: 831 VEKVAEKLGLDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVL 890

Query: 255 DIPLPELQGLKTLKVAFHYATKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHPNAELRL 314
           DIPLPELQGLKTLKVAFH+ATK+EVV H IRLPKQSTVGDV+++LKTKVELSHP+AELRL
Sbjct: 891 DIPLPELQGLKTLKVAFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRL 950

Query: 315 LEVFYHKIYKVFPPNEK 331
           LEVFYHKIYK+FP  E+
Sbjct: 951 LEVFYHKIYKIFPSTER 967


>AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 |
           chr5:2019545-2027834 REVERSE LENGTH=1115
          Length = 1115

 Score =  476 bits (1226), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 235/317 (74%), Positives = 273/317 (86%), Gaps = 2/317 (0%)

Query: 15  VGQLREVSNKVHNGELKLFLEVECGMDSHPIAPPDKTKDDILLFFKLYDPEKEELRYVGR 74
           VGQ+RE SNK +  ELKLFLEVE  +D  PI PP+K+K+DILLFFKLYDPEK  L Y GR
Sbjct: 652 VGQIREASNKANTAELKLFLEVE-HLDLRPIPPPEKSKEDILLFFKLYDPEKAVLSYAGR 710

Query: 75  LFVKCTGKPSEILTKLNEMAGYDPEEDIALYEEIKFEPNVMCEPIDKKATFRASQLEDGD 134
           L VK + KP +I  KLNEM G+ P+E+I L+EEIKFEP VMCE +DKK +FR  Q+EDGD
Sbjct: 711 LMVKSSSKPMDITGKLNEMVGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGD 770

Query: 135 IVCFQKAPPVDGEEHFRYPDVPSYLEYVHNRQVVHFRSLDRPKEDDFFLEMSRLYTYDDV 194
           I+CFQK P V+ E    YP VPS+LEYV NRQ+V FR+L++PKED+F LE+S+ +TYDDV
Sbjct: 771 IICFQK-PLVNKEIECLYPAVPSFLEYVQNRQLVRFRALEKPKEDEFVLELSKQHTYDDV 829

Query: 195 VEKVAQQLGLDDPSKIRLTPHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVL 254
           VEKVA++LGLDDPSK+RLT HNCYSQQPKPQPIKYRGV+HLSDMLVHYNQTSDILYYEVL
Sbjct: 830 VEKVAEKLGLDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVL 889

Query: 255 DIPLPELQGLKTLKVAFHYATKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHPNAELRL 314
           DIPLPELQGLKTLKVAFH+ATK+EVV H IRLPKQSTVGDV+++LKTKVELSHP+AELRL
Sbjct: 890 DIPLPELQGLKTLKVAFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRL 949

Query: 315 LEVFYHKIYKVFPPNEK 331
           LEVFYHKIYK+FP  E+
Sbjct: 950 LEVFYHKIYKIFPSTER 966


>AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 |
           chr5:2020682-2027834 REVERSE LENGTH=985
          Length = 985

 Score =  476 bits (1226), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 235/317 (74%), Positives = 273/317 (86%), Gaps = 2/317 (0%)

Query: 15  VGQLREVSNKVHNGELKLFLEVECGMDSHPIAPPDKTKDDILLFFKLYDPEKEELRYVGR 74
           VGQ+RE SNK +  ELKLFLEVE  +D  PI PP+K+K+DILLFFKLYDPEK  L Y GR
Sbjct: 653 VGQIREASNKANTAELKLFLEVE-HLDLRPIPPPEKSKEDILLFFKLYDPEKAVLSYAGR 711

Query: 75  LFVKCTGKPSEILTKLNEMAGYDPEEDIALYEEIKFEPNVMCEPIDKKATFRASQLEDGD 134
           L VK + KP +I  KLNEM G+ P+E+I L+EEIKFEP VMCE +DKK +FR  Q+EDGD
Sbjct: 712 LMVKSSSKPMDITGKLNEMVGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGD 771

Query: 135 IVCFQKAPPVDGEEHFRYPDVPSYLEYVHNRQVVHFRSLDRPKEDDFFLEMSRLYTYDDV 194
           I+CFQK P V+ E    YP VPS+LEYV NRQ+V FR+L++PKED+F LE+S+ +TYDDV
Sbjct: 772 IICFQK-PLVNKEIECLYPAVPSFLEYVQNRQLVRFRALEKPKEDEFVLELSKQHTYDDV 830

Query: 195 VEKVAQQLGLDDPSKIRLTPHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVL 254
           VEKVA++LGLDDPSK+RLT HNCYSQQPKPQPIKYRGV+HLSDMLVHYNQTSDILYYEVL
Sbjct: 831 VEKVAEKLGLDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVL 890

Query: 255 DIPLPELQGLKTLKVAFHYATKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHPNAELRL 314
           DIPLPELQGLKTLKVAFH+ATK+EVV H IRLPKQSTVGDV+++LKTKVELSHP+AELRL
Sbjct: 891 DIPLPELQGLKTLKVAFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRL 950

Query: 315 LEVFYHKIYKVFPPNEK 331
           LEVFYHKIYK+FP  E+
Sbjct: 951 LEVFYHKIYKIFPSTER 967