Miyakogusa Predicted Gene

Lj6g3v1055580.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1055580.2 tr|D3KTZ6|D3KTZ6_LOTJA LysM type receptor kinase
OS=Lotus japonicus GN=LYS6 PE=2 SV=1,98.68,0, ,CUFF.58862.2
         (228 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G21630.1 | Symbols: CERK1, LYSM RLK1 | chitin elicitor recept...   211   2e-55

>AT3G21630.1 | Symbols: CERK1, LYSM RLK1 | chitin elicitor receptor
           kinase 1 | chr3:7615543-7618530 REVERSE LENGTH=617
          Length = 617

 Score =  211 bits (538), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 109/214 (50%), Positives = 145/214 (67%), Gaps = 13/214 (6%)

Query: 12  LLLFSFILLPSTSQSKCTHGCALAQASYYLLNGSNLTYISEIMQSSLLTKPED------I 65
           LLLFSF       +SKC   C LA ASYYL NG+ L+ I++ + SS+   P D      I
Sbjct: 12  LLLFSFFF---AVESKCRTSCPLALASYYLENGTTLSVINQNLNSSI--APYDQINFDPI 66

Query: 66  VSYNQDTIASKDSVQAGQRINVPFPCDCIEGEFLGHTFQYDVQKGDRYDTIAGTNYANLT 125
           + YN + I  KD +Q G R+ VPFPC+C  G+FLGH F Y V++ D Y+ +A +NYANLT
Sbjct: 67  LRYNSN-IKDKDRIQMGSRVLVPFPCECQPGDFLGHNFSYSVRQEDTYERVAISNYANLT 125

Query: 126 TVEWLRRFNSYPPDNIPDTGTLNVTVNCSCGDSGVG-DYGLFVTYPLRPGETLGSVASNV 184
           T+E L+  N +P  NIP + TLNV VNCSCGD  V  D+GLFVTYPLRP ++L S+A + 
Sbjct: 126 TMESLQARNPFPATNIPLSATLNVLVNCSCGDESVSKDFGLFVTYPLRPEDSLSSIARSS 185

Query: 185 KLDSALLQKYNPNVNFNQGSGIVYIPAKDQNGSY 218
            + + +LQ+YNP VNFN G+GIVY+P +D NG++
Sbjct: 186 GVSADILQRYNPGVNFNSGNGIVYVPGRDPNGAF 219