Miyakogusa Predicted Gene

Lj6g3v1049120.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1049120.2 Non Chatacterized Hit- tr|I1KDG6|I1KDG6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.16883
PE,87.78,0,SecY,SecY/SEC61-alpha family; SECY_1,SecY/SEC61-alpha
family; SECY_2,SecY/SEC61-alpha family; 3a0501,CUFF.58836.2
         (536 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G18710.1 | Symbols: SCY1 | SECY homolog 1 | chr2:8112231-8114...   790   0.0  
AT2G31530.1 | Symbols: EMB2289, SCY2 | SecY protein transport fa...   128   8e-30

>AT2G18710.1 | Symbols: SCY1 | SECY homolog 1 | chr2:8112231-8114452
           REVERSE LENGTH=551
          Length = 551

 Score =  790 bits (2041), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/509 (78%), Positives = 434/509 (85%), Gaps = 3/509 (0%)

Query: 29  SFKTSICQAHRTPSPSHSWSSGNL--STSYEAANFDPLGINPDLSSGLSSTWKDLVCLFS 86
           SF +   +  R    + SW+ G +  S S EA+ FDPLGINPD +SGLSS W+  V L S
Sbjct: 40  SFFSVSTKTRRNTCKAKSWNLGLVINSRSSEASVFDPLGINPDETSGLSSIWESFVSLLS 99

Query: 87  QPFESTSSTEKGKPNSSRGVAAAIEDSSIDFGDXXXXXXXXXXXXXXXXXVLSRLGVYIP 146
             FES+S   + KP+S RGVAAAIEDSSIDFGD                  LSRLG+YIP
Sbjct: 100 PSFESSSGNRRDKPSSGRGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGIYIP 159

Query: 147 LGGVNREAFIGNLDQNSLLSTLDSFSGGGIGRLGLCSLGIVPFINAQIVFQLLAQVYPKL 206
           LGGVNREAF+GNLDQNS+LSTLD+FSGGGIGRLG+CSLGIVPFINAQIVFQLLAQVYPKL
Sbjct: 160 LGGVNREAFVGNLDQNSILSTLDTFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKL 219

Query: 207 QDLQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLFLRPYVNDFSTEWVISSVILLTLG 266
           QDLQK+EGEAGRKKILQYTRYASVGFAIVQAIGQV +LRPYVNDFSTEWV+SSV LLTLG
Sbjct: 220 QDLQKKEGEAGRKKILQYTRYASVGFAIVQAIGQVFYLRPYVNDFSTEWVVSSVTLLTLG 279

Query: 267 SAFTTYIGERITDLKLGNGTSLLIFTNIISYLPASFGRTFSEAFNDANYVGLATIIVSFF 326
           S  TTYIGERI+DLKLGNGTSLLIFT+IISYLPASFGRT +EA  + NY GL TI+VSF 
Sbjct: 280 SVLTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTTAEALQEGNYTGLGTIVVSFL 339

Query: 327 LLVVGIVYVQEAERKIPLNYASRLT-RSSGLEKSAYLPFKVNSSGVMPIIFSTSSLALPG 385
           LLV+GIVYVQEAERKIPLNYASR T ++ GL+KSAYLPFKVNS+GVMPIIFSTSSLALP 
Sbjct: 340 LLVLGIVYVQEAERKIPLNYASRYTSKAGGLQKSAYLPFKVNSAGVMPIIFSTSSLALPA 399

Query: 386 TLARFTGLSPLKSAAMALNPGGSFYLPFNIFLIAFFNYYYTFLQLDPDDVSEQLKRQGAS 445
           TLARFTG+S LK+ A AL PGGSFYLP NI LIAFFNYYYTFLQLDPDDVSEQLKRQGAS
Sbjct: 400 TLARFTGISALKNVAFALTPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGAS 459

Query: 446 IPLVRPGRSTATFIKTVLSRISVLGSTFLAILAAGPAVVEQTTHLTAFRGFAGTSILILV 505
           IPLVRPG+STA FIKTVL RISVLGS FLA+LAAGPAVVEQ THLTAFRGFAGTS+LILV
Sbjct: 460 IPLVRPGKSTALFIKTVLGRISVLGSAFLAVLAAGPAVVEQITHLTAFRGFAGTSVLILV 519

Query: 506 GCATDTARKVQAEIISQKYKNIEFYDFDK 534
           GCATDTARKVQAEIISQKYKNIEFY+ DK
Sbjct: 520 GCATDTARKVQAEIISQKYKNIEFYELDK 548


>AT2G31530.1 | Symbols: EMB2289, SCY2 | SecY protein transport
           family protein | chr2:13427060-13430308 FORWARD
           LENGTH=575
          Length = 575

 Score =  128 bits (322), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 195/413 (47%), Gaps = 49/413 (11%)

Query: 137 VLSRLGVYIPLGGVNREAFIGNLDQNSLLSTLDSFSGGGIGRLG---------LCSLGIV 187
           VLSR+G +IPL G +R      + Q+ L     SF  G +  LG         L  LG+ 
Sbjct: 164 VLSRVGYFIPLPGFDRRL----IPQDYL-----SFVSGSVEELGEFGAEIKLSLFQLGLS 214

Query: 188 PFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLFLRPY 247
           P I A I+ Q+L  V P L  L+K EG  G +KI  Y  + S  FAIV+A+  V +    
Sbjct: 215 PQIIASIIMQVLCHVLPSLVKLRK-EGLDGHEKIKSYIWWLSFFFAIVEAL-VVAYTSLQ 272

Query: 248 VNDFSTEWVISSVI----LLTLGSAFTTYIGERITDLKLGNGTSLLIFTNIISYLPASFG 303
            + F+    +  V+    LL  G+   T++ + I++   G+G+SL+I   I++     + 
Sbjct: 273 YSVFAATAQVKHVMMTSSLLVCGAMTMTWLCDTISESGFGHGSSLIICVGILT----GYT 328

Query: 304 RTFSEAFND-----ANYVGLATIIVSFFLLVVGI-VYVQEAERKIPLNY-------ASRL 350
            T  +  N      +N++     ++  F +V    V V E  RKI L Y       ASR 
Sbjct: 329 ETLHKMLNQISGSFSNWLPYLLGLLGIFTVVTMFAVVVTEGCRKIKLQYYGFKLASASR- 387

Query: 351 TRSSGLEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLSPLKSAAMALNPGGSFY 410
             S   E   Y+PF +N +G+ P++ +T  LA P  LA   G   L +    LNP  +  
Sbjct: 388 EGSPITEVEPYIPFNINPAGMQPVLTTTYLLAFPSILASILGSPFLLNMKEILNPESTVG 447

Query: 411 LPFNIF--LIAFFNYYYTFLQLD--PDDVSEQLKRQGASIPLVRPGRSTATFIKTVLSRI 466
            P  ++  + AFF + +    +   P ++++ L + GA IP ++PG++T  ++  + +  
Sbjct: 448 APPWVYYSIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNIKPGKATIEYLTKIQAST 507

Query: 467 SVLGSTFLAILAAGPAVVEQTTHLTAFRGFA--GTSILILVGCATDTARKVQA 517
              G   L+ LA    V++     +  +GF+   TS+LI+VG   +  R   A
Sbjct: 508 RFWGGLLLSFLATASTVLDHYLR-SINQGFSIGFTSVLIIVGSIIELRRSYHA 559