Miyakogusa Predicted Gene
- Lj6g3v1038860.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1038860.1 tr|B0BLB2|B0BLB2_LOTJA CM0545.290.nc protein
OS=Lotus japonicus GN=CM0545.290.nc PE=4 SV=1,92.76,0,seg,NULL;
Cysteine proteinases,NULL; TRAF domain-like,TRAF-like;
UCH_2_1,Peptidase C19, ubiquitin ca,CUFF.58936.1
(1119 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 1835 0.0
AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 1829 0.0
AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 1829 0.0
AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 1823 0.0
AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 1614 0.0
AT3G58250.1 | Symbols: | TRAF-like family protein | chr3:215707... 140 5e-33
AT3G58270.2 | Symbols: | Arabidopsis phospholipase-like protein... 131 3e-30
AT3G58270.1 | Symbols: | Arabidopsis phospholipase-like protein... 131 3e-30
AT3G58360.1 | Symbols: | TRAF-like family protein | chr3:215935... 125 1e-28
AT3G58340.1 | Symbols: | TRAF-like family protein | chr3:215890... 125 2e-28
AT3G58210.1 | Symbols: | TRAF-like family protein | chr3:215626... 121 3e-27
AT3G58410.1 | Symbols: | TRAF-like family protein | chr3:216048... 112 2e-24
AT3G58260.1 | Symbols: | TRAF-like family protein | chr3:215737... 110 8e-24
AT3G58350.1 | Symbols: RTM3 | RESTRICTED TEV MOVEMENT 3 | chr3:2... 108 2e-23
AT3G27040.1 | Symbols: | Meprin and TRAF (MATH) homology domain... 106 1e-22
AT2G05420.1 | Symbols: | TRAF-like family protein | chr2:198390... 105 1e-22
AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specifi... 102 1e-21
AT3G58200.1 | Symbols: | TRAF-like family protein | chr3:215600... 101 4e-21
AT2G01790.1 | Symbols: | TRAF-like family protein | chr2:341322... 100 4e-21
AT2G25320.1 | Symbols: | TRAF-like family protein | chr2:107819... 96 1e-19
AT1G31390.1 | Symbols: | TRAF-like family protein | chr1:112431... 96 1e-19
AT5G43560.2 | Symbols: | TRAF-like superfamily protein | chr5:1... 96 2e-19
AT5G43560.1 | Symbols: | TRAF-like superfamily protein | chr5:1... 96 2e-19
AT3G44790.1 | Symbols: | TRAF-like family protein | chr3:163287... 96 2e-19
AT1G04300.1 | Symbols: | TRAF-like superfamily protein | chr1:1... 95 3e-19
AT3G44800.1 | Symbols: | Meprin and TRAF (MATH) homology domain... 95 3e-19
AT3G58290.1 | Symbols: | TRAF-like superfamily protein | chr3:2... 94 5e-19
AT2G25330.1 | Symbols: | TRAF-like family protein | chr2:107889... 93 1e-18
AT1G31400.1 | Symbols: | TRAF-like family protein | chr1:112452... 91 4e-18
AT5G52330.1 | Symbols: | TRAF-like superfamily protein | chr5:2... 91 4e-18
AT1G04300.3 | Symbols: | TRAF-like superfamily protein | chr1:1... 91 5e-18
AT3G58220.2 | Symbols: | TRAF-like family protein | chr3:215646... 90 1e-17
AT3G58220.1 | Symbols: | TRAF-like family protein | chr3:215651... 90 1e-17
AT3G17380.1 | Symbols: | TRAF-like family protein | chr3:595024... 89 2e-17
AT3G58440.1 | Symbols: | TRAF-like superfamily protein | chr3:2... 88 4e-17
AT1G04300.4 | Symbols: | TRAF-like superfamily protein | chr1:1... 83 9e-16
AT4G09780.1 | Symbols: | TRAF-like family protein | chr4:615953... 83 1e-15
AT3G58240.1 | Symbols: | TRAF-like superfamily protein | chr3:2... 82 2e-15
AT2G32870.1 | Symbols: | TRAF-like family protein | chr2:139449... 82 3e-15
AT2G32880.1 | Symbols: | TRAF-like family protein | chr2:139489... 81 4e-15
AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 | ... 79 1e-14
AT2G42460.2 | Symbols: | TRAF-like family protein | chr2:176780... 78 4e-14
AT2G42460.1 | Symbols: | TRAF-like family protein | chr2:176763... 78 4e-14
AT3G29580.1 | Symbols: | Arabidopsis phospholipase-like protein... 77 5e-14
AT4G09770.2 | Symbols: | TRAF-like family protein | chr4:615453... 77 7e-14
AT4G09770.1 | Symbols: | TRAF-like family protein | chr4:615453... 77 7e-14
AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific proteas... 77 1e-13
AT3G58400.1 | Symbols: | TRAF-like family protein | chr3:216026... 75 2e-13
AT2G42480.1 | Symbols: | TRAF-like family protein | chr2:176858... 75 3e-13
AT5G26260.1 | Symbols: | TRAF-like family protein | chr5:920049... 74 4e-13
AT5G26320.1 | Symbols: | TRAF-like family protein | chr5:923831... 74 8e-13
AT3G58380.1 | Symbols: | TRAF-like family protein | chr3:215979... 73 1e-12
AT3G20360.1 | Symbols: | TRAF-like family protein | chr3:709995... 73 1e-12
AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific proteas... 73 1e-12
AT2G05410.1 | Symbols: | TRAF-like family protein | chr2:197749... 72 2e-12
AT4G01390.1 | Symbols: | TRAF-like family protein | chr4:570242... 72 3e-12
AT5G26280.1 | Symbols: | TRAF-like family protein | chr5:920872... 71 4e-12
AT3G28220.1 | Symbols: | TRAF-like family protein | chr3:105244... 69 2e-11
AT1G58270.1 | Symbols: ZW9 | TRAF-like family protein | chr1:216... 68 4e-11
AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 | ... 68 4e-11
AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 | ... 67 7e-11
AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 | ch... 67 8e-11
AT3G20370.1 | Symbols: | TRAF-like family protein | chr3:710548... 67 8e-11
AT3G58430.1 | Symbols: | TRAF-like family protein | chr3:216131... 67 9e-11
AT3G58290.3 | Symbols: | TRAF-like superfamily protein | chr3:2... 67 1e-10
AT2G04170.5 | Symbols: | TRAF-like family protein | chr2:141766... 66 1e-10
AT2G04170.4 | Symbols: | TRAF-like family protein | chr2:141740... 66 2e-10
AT2G04170.3 | Symbols: | TRAF-like family protein | chr2:141740... 66 2e-10
AT2G04170.2 | Symbols: | TRAF-like family protein | chr2:141740... 65 2e-10
AT2G04170.1 | Symbols: | TRAF-like family protein | chr2:141740... 65 2e-10
AT4G00780.1 | Symbols: | TRAF-like family protein | chr4:334779... 65 2e-10
AT3G46190.1 | Symbols: | TRAF-like family protein | chr3:169658... 64 6e-10
AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 | ... 64 6e-10
AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 | ... 64 6e-10
AT3G22080.1 | Symbols: | TRAF-like family protein | chr3:777781... 64 9e-10
AT2G15710.1 | Symbols: | TRAF-like family protein | chr2:684264... 63 1e-09
AT2G04190.1 | Symbols: | TRAF-like family protein | chr2:142759... 62 3e-09
AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 | ... 62 3e-09
AT5G26290.1 | Symbols: | TRAF-like family protein | chr5:922607... 61 4e-09
AT4G31670.1 | Symbols: UBP18 | ubiquitin-specific protease 18 | ... 60 7e-09
AT5G52330.2 | Symbols: | TRAF-like superfamily protein | chr5:2... 60 8e-09
AT1G65050.1 | Symbols: | TRAF-like superfamily protein | chr1:2... 60 9e-09
AT2G42470.1 | Symbols: | TRAF-like family protein | chr2:176798... 60 9e-09
AT5G26300.1 | Symbols: | TRAF-like family protein | chr5:922932... 58 3e-08
AT3G58280.1 | Symbols: | Arabidopsis phospholipase-like protein... 57 5e-08
AT1G65150.2 | Symbols: | TRAF-like family protein | chr1:242041... 57 5e-08
AT1G65150.1 | Symbols: | TRAF-like family protein | chr1:242041... 57 5e-08
AT4G16045.1 | Symbols: | TRAF-like superfamily protein | chr4:9... 57 7e-08
AT5G26280.2 | Symbols: | TRAF-like family protein | chr5:920872... 56 2e-07
AT1G69660.1 | Symbols: | TRAF-like family protein | chr1:261996... 55 3e-07
AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 54 5e-07
AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 52 3e-06
AT1G04300.2 | Symbols: | TRAF-like superfamily protein | chr1:1... 52 3e-06
>AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1116
Length = 1116
Score = 1835 bits (4753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 890/1121 (79%), Positives = 980/1121 (87%), Gaps = 7/1121 (0%)
Query: 1 MTVMMSAPIDQQDDEEVLVPHADLPENNHQPMDVVAQPETA-NAVESQPVAEPPPTSRFT 59
MT+M P+DQ +DEE+LVP++DL + QPM+V QPETA + VE+QP AE PPT +FT
Sbjct: 1 MTMMTPPPVDQPEDEEMLVPNSDLVDGPAQPMEV-TQPETAASTVENQP-AEDPPTLKFT 58
Query: 60 WRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSASLPYGWSRYA 119
W I NF+R NT+K YS++FVVGGYKWR+LIFPKGNNVD+LSMYLDV+D+ASLPYGWSRYA
Sbjct: 59 WTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAASLPYGWSRYA 118
Query: 120 QFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLLIEAE 179
QFSLAVVNQI +YTVRK+TQHQFNARESDWGFTSFMPL ELYDPSRGYLVNDT+L+EAE
Sbjct: 119 QFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAE 178
Query: 180 VLVRRIVDYWNYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMP 239
V VR+++DYW+YDSKKETG+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND P
Sbjct: 179 VAVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAP 238
Query: 240 SGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMK 299
+ SIPLALQSLFYKLQY+DTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMK
Sbjct: 239 TASIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMK 298
Query: 300 GTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVER 359
GTVVEGTIQ+LFEGHHMNYIECINVD+KSTRKESFYDLQLDVKGC+DVYASFDKYVEVER
Sbjct: 299 GTVVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVER 358
Query: 360 LEGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPSELD 419
LEGDNKYHAE +GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFP ELD
Sbjct: 359 LEGDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELD 418
Query: 420 LDREDGKYLSPDADRSVRNLYTXXXXXXXXXXXXXXXYYAFIRPTLSEQWYKFDDERVTK 479
LDREDGKYLSPDADRSVRNLYT YYAFIRPTLS+QWYKFDDERVTK
Sbjct: 419 LDREDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTK 478
Query: 480 EDNKRALEEQYGGEEELPQTNPGF-NNAPFKFTKYSNAYMLVYIRESDKDKIICNVDEKD 538
ED KRALEEQYGGEEELPQTNPGF NN PFKFTKYSNAYMLVYIRESDKDKIICNVDEKD
Sbjct: 479 EDLKRALEEQYGGEEELPQTNPGFNNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKD 538
Query: 539 IAXXXXXXXXXXXXXXXXXXXXXXXXHLYTIIKVARNEDLGEQIGKDIYFDLVDHDKVRS 598
IA HLYTIIKVAR+EDL EQIGKDIYFDLVDHDKVRS
Sbjct: 539 IAEHLRVRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGKDIYFDLVDHDKVRS 598
Query: 599 FRVQKQMSLNVFKEEVAKEFGVPVQFQRYWLWAKRQNHTYRPNRPLTPAEEAQSVGQLRE 658
FR+QKQ FKEEVAKEFGVPVQ QR+W+WAKRQNHTYRPNRPLTP EE Q VGQ+RE
Sbjct: 599 FRIQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIRE 658
Query: 659 VSNKVHNGELKLFLEVECGMDSHPIAPPDKTKDDILLFFKLYDPEKEELRYVGRLFVKCT 718
SNK + ELKLFLEVE +D PI PP+K+K+DILLFFKLYDPEK L Y GRL VK +
Sbjct: 659 ASNKANTAELKLFLEVE-HLDLRPIPPPEKSKEDILLFFKLYDPEKAVLSYAGRLMVKSS 717
Query: 719 GKPSEILTKLNEMAGYDPEEDIALYEEIKFEPNVMCEPIDKKATFRASQLEDGDIVCFQK 778
KP +I KLNEM G+ P+E+I L+EEIKFEP VMCE +DKK +FR Q+EDGDI+CFQK
Sbjct: 718 SKPMDITGKLNEMVGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGDIICFQK 777
Query: 779 APPVDGEEHFRYPDVPSYLEYVHNRQVVHFRSLDRPKEDDFFLEMSRLYTYDDVVEKVAH 838
P V+ E YP VPS+LEYV NRQ+V FR+L++PKED+F LE+S+ +TYDDVVEKVA
Sbjct: 778 -PLVNKEIECLYPAVPSFLEYVQNRQLVRFRALEKPKEDEFVLELSKQHTYDDVVEKVAE 836
Query: 839 QLGLDDPSKIRLTPHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPE 898
+LGLDDPSK+RLT HNCYSQQPKPQPIKYRGV+HLSDMLVHYNQTSDILYYEVLDIPLPE
Sbjct: 837 KLGLDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPE 896
Query: 899 LQGLKTLKVAFHYATKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHPNAELRLLEVFYH 958
LQGLKTLKVAFH+ATK+EVV H IRLPKQSTVGDV+++LKTKVELSHP+AELRLLEVFYH
Sbjct: 897 LQGLKTLKVAFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRLLEVFYH 956
Query: 959 KIYKVFPPNEKIENINDQYWTLRAEEIPEEEKNVGPHDRLIHVYHFTKDTAQNQMQIQNF 1018
KIYK+FP E+IENINDQYWTLRAEEIPEEEKN+GP+DRLI VYHF K+T QNQ Q+QNF
Sbjct: 957 KIYKIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQ-QVQNF 1015
Query: 1019 GEPFFLVIHEGETLSEIKERIQKKLQVPEEEFGKWKFAFVSLGRPEYLSDSDIVSSRFQR 1078
GEPFFLVIHEGETL EIK RIQKKL V +E+F KWKFAF+S+GRPEYL D+D+V +RFQR
Sbjct: 1016 GEPFFLVIHEGETLEEIKNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDTDVVYNRFQR 1075
Query: 1079 RDVYGAWEQYFGLEHTDNAPKRSYAVNQNRHTFEKPVKIYN 1119
RDVYGA+EQY GLEH D PKR+YA NQNRH +EKPVKIYN
Sbjct: 1076 RDVYGAFEQYLGLEHADTTPKRAYAANQNRHAYEKPVKIYN 1116
>AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1115
Length = 1115
Score = 1829 bits (4738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 874/1119 (78%), Positives = 979/1119 (87%), Gaps = 4/1119 (0%)
Query: 1 MTVMMSAPIDQQDDEEVLVPHADLPENNHQPMDVVAQPETANAVESQPVAEPPPTSRFTW 60
MT+M P+DQQ+DEE+LVP+ DL E QPM+V A AVE+ P E PP+ +FTW
Sbjct: 1 MTMMTPPPLDQQEDEEMLVPNPDLVEGP-QPMEVAQTDPAATAVENPP-PEDPPSLKFTW 58
Query: 61 RIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSASLPYGWSRYAQ 120
I FTRLNT+K YS++FVVGGYKWR+LIFPKGNNVD+LSMYLDVAD+A+LPYGWSRY+Q
Sbjct: 59 TIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAANLPYGWSRYSQ 118
Query: 121 FSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLLIEAEV 180
FSLAVVNQ+ N+Y++RK+TQHQFNARESDWGFTSFMPL ELY+P+RGYLVNDT+LIEAEV
Sbjct: 119 FSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVNDTVLIEAEV 178
Query: 181 LVRRIVDYWNYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPS 240
VR+++DYW+YDSKKETG+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND P+
Sbjct: 179 AVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPT 238
Query: 241 GSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKG 300
SIPLALQSLFYKLQY+DTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKG
Sbjct: 239 ASIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKG 298
Query: 301 TVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERL 360
TVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGC+DVYASFDKYVEVERL
Sbjct: 299 TVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERL 358
Query: 361 EGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPSELDL 420
EGDNKYHAE + LQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFP +LDL
Sbjct: 359 EGDNKYHAEGHDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDL 418
Query: 421 DREDGKYLSPDADRSVRNLYTXXXXXXXXXXXXXXXYYAFIRPTLSEQWYKFDDERVTKE 480
DREDG+YLSPDAD+SVRNLYT YYAFIRPTLS+QWYKFDDERVTKE
Sbjct: 419 DREDGRYLSPDADKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKE 478
Query: 481 DNKRALEEQYGGEEELPQTNPGFNNAPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIA 540
D KRALEEQYGGEEELPQ NPGFNN PFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIA
Sbjct: 479 DVKRALEEQYGGEEELPQNNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIA 538
Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXHLYTIIKVARNEDLGEQIGKDIYFDLVDHDKVRSFR 600
HL+T IKVAR++D+ EQIGK+IYFDLVDH+KVRSFR
Sbjct: 539 EHLRVRLKKEQEEKEDKRKYKAQAHLFTTIKVARDDDITEQIGKNIYFDLVDHEKVRSFR 598
Query: 601 VQKQMSLNVFKEEVAKEFGVPVQFQRYWLWAKRQNHTYRPNRPLTPAEEAQSVGQLREVS 660
+QKQ FKEEVAKEFGVPVQ QR+W+WAKRQNHTYRPNRPL+P EE Q+VGQ+RE S
Sbjct: 599 IQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLSPNEELQTVGQIREAS 658
Query: 661 NKVHNGELKLFLEVECGMDSHPIAPPDKTKDDILLFFKLYDPEKEELRYVGRLFVKCTGK 720
NK +N ELKLFLE+E G D PI PP+KT +DILLFFKLYDPE LRYVGRL VK + K
Sbjct: 659 NKANNAELKLFLEIERGPDDLPIPPPEKTSEDILLFFKLYDPENAVLRYVGRLMVKSSSK 718
Query: 721 PSEILTKLNEMAGYDPEEDIALYEEIKFEPNVMCEPIDKKATFRASQLEDGDIVCFQKAP 780
P +I+ +LN+MAG+ P+E+I L+EEIKFEP VMCE IDKK +FR Q+EDGDI+C+QK
Sbjct: 719 PMDIVGQLNKMAGFAPDEEIELFEEIKFEPCVMCEQIDKKTSFRLCQIEDGDIICYQKPL 778
Query: 781 PVDGEEHFRYPDVPSYLEYVHNRQVVHFRSLDRPKEDDFFLEMSRLYTYDDVVEKVAHQL 840
++ E FRYPDVPS+LEYV NR++V FR+L++PKED+F +E+S+L+TYDDVVE+VA +L
Sbjct: 779 SIE-ESEFRYPDVPSFLEYVQNRELVRFRTLEKPKEDEFTMELSKLHTYDDVVERVAEKL 837
Query: 841 GLDDPSKIRLTPHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPELQ 900
GLDDPSK+RLT HNCYSQQPKPQPIKYRGV+HLSDMLVHYNQTSDILYYEVLDIPLPELQ
Sbjct: 838 GLDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQ 897
Query: 901 GLKTLKVAFHYATKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHPNAELRLLEVFYHKI 960
GLKTLKVAFH ATKDEV+ H IRLPKQSTVGDV+++LKTKVELSH +AELRLLEVF+HKI
Sbjct: 898 GLKTLKVAFHSATKDEVIIHNIRLPKQSTVGDVINELKTKVELSHQDAELRLLEVFFHKI 957
Query: 961 YKVFPPNEKIENINDQYWTLRAEEIPEEEKNVGPHDRLIHVYHFTKDTAQNQMQIQNFGE 1020
YK+FP E+IENINDQYWTLRAEEIPEEEKN+GP+DRLIHVYHFTK+ QNQ Q+QNFGE
Sbjct: 958 YKIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLIHVYHFTKEAGQNQ-QVQNFGE 1016
Query: 1021 PFFLVIHEGETLSEIKERIQKKLQVPEEEFGKWKFAFVSLGRPEYLSDSDIVSSRFQRRD 1080
PFFLVIHEGETL EIK RIQKKL VP+E+F KWKFA S+GRP+YL D+D+V +RFQRRD
Sbjct: 1017 PFFLVIHEGETLEEIKTRIQKKLHVPDEDFAKWKFASFSMGRPDYLLDTDVVYNRFQRRD 1076
Query: 1081 VYGAWEQYFGLEHTDNAPKRSYAVNQNRHTFEKPVKIYN 1119
VYGAWEQY GLEH DNAPKR+YA NQNRH +EKPVKIYN
Sbjct: 1077 VYGAWEQYLGLEHIDNAPKRAYAANQNRHAYEKPVKIYN 1115
>AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1115
Length = 1115
Score = 1829 bits (4737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 889/1121 (79%), Positives = 979/1121 (87%), Gaps = 8/1121 (0%)
Query: 1 MTVMMSAPIDQQDDEEVLVPHADLPENNHQPMDVVAQPETA-NAVESQPVAEPPPTSRFT 59
MT+M P+D +D EE+LVP++DL + QPM+V QPETA + VE+QP AE PPT +FT
Sbjct: 1 MTMMTPPPVDPED-EEMLVPNSDLVDGPAQPMEV-TQPETAASTVENQP-AEDPPTLKFT 57
Query: 60 WRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSASLPYGWSRYA 119
W I NF+R NT+K YS++FVVGGYKWR+LIFPKGNNVD+LSMYLDV+D+ASLPYGWSRYA
Sbjct: 58 WTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAASLPYGWSRYA 117
Query: 120 QFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLLIEAE 179
QFSLAVVNQI +YTVRK+TQHQFNARESDWGFTSFMPL ELYDPSRGYLVNDT+L+EAE
Sbjct: 118 QFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAE 177
Query: 180 VLVRRIVDYWNYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMP 239
V VR+++DYW+YDSKKETG+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND P
Sbjct: 178 VAVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAP 237
Query: 240 SGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMK 299
+ SIPLALQSLFYKLQY+DTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMK
Sbjct: 238 TASIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMK 297
Query: 300 GTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVER 359
GTVVEGTIQ+LFEGHHMNYIECINVD+KSTRKESFYDLQLDVKGC+DVYASFDKYVEVER
Sbjct: 298 GTVVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVER 357
Query: 360 LEGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPSELD 419
LEGDNKYHAE +GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFP ELD
Sbjct: 358 LEGDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELD 417
Query: 420 LDREDGKYLSPDADRSVRNLYTXXXXXXXXXXXXXXXYYAFIRPTLSEQWYKFDDERVTK 479
LDREDGKYLSPDADRSVRNLYT YYAFIRPTLS+QWYKFDDERVTK
Sbjct: 418 LDREDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTK 477
Query: 480 EDNKRALEEQYGGEEELPQTNPGF-NNAPFKFTKYSNAYMLVYIRESDKDKIICNVDEKD 538
ED KRALEEQYGGEEELPQTNPGF NN PFKFTKYSNAYMLVYIRESDKDKIICNVDEKD
Sbjct: 478 EDLKRALEEQYGGEEELPQTNPGFNNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKD 537
Query: 539 IAXXXXXXXXXXXXXXXXXXXXXXXXHLYTIIKVARNEDLGEQIGKDIYFDLVDHDKVRS 598
IA HLYTIIKVAR+EDL EQIGKDIYFDLVDHDKVRS
Sbjct: 538 IAEHLRVRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGKDIYFDLVDHDKVRS 597
Query: 599 FRVQKQMSLNVFKEEVAKEFGVPVQFQRYWLWAKRQNHTYRPNRPLTPAEEAQSVGQLRE 658
FR+QKQ FKEEVAKEFGVPVQ QR+W+WAKRQNHTYRPNRPLTP EE Q VGQ+RE
Sbjct: 598 FRIQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIRE 657
Query: 659 VSNKVHNGELKLFLEVECGMDSHPIAPPDKTKDDILLFFKLYDPEKEELRYVGRLFVKCT 718
SNK + ELKLFLEVE +D PI PP+K+K+DILLFFKLYDPEK L Y GRL VK +
Sbjct: 658 ASNKANTAELKLFLEVE-HLDLRPIPPPEKSKEDILLFFKLYDPEKAVLSYAGRLMVKSS 716
Query: 719 GKPSEILTKLNEMAGYDPEEDIALYEEIKFEPNVMCEPIDKKATFRASQLEDGDIVCFQK 778
KP +I KLNEM G+ P+E+I L+EEIKFEP VMCE +DKK +FR Q+EDGDI+CFQK
Sbjct: 717 SKPMDITGKLNEMVGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGDIICFQK 776
Query: 779 APPVDGEEHFRYPDVPSYLEYVHNRQVVHFRSLDRPKEDDFFLEMSRLYTYDDVVEKVAH 838
P V+ E YP VPS+LEYV NRQ+V FR+L++PKED+F LE+S+ +TYDDVVEKVA
Sbjct: 777 -PLVNKEIECLYPAVPSFLEYVQNRQLVRFRALEKPKEDEFVLELSKQHTYDDVVEKVAE 835
Query: 839 QLGLDDPSKIRLTPHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPE 898
+LGLDDPSK+RLT HNCYSQQPKPQPIKYRGV+HLSDMLVHYNQTSDILYYEVLDIPLPE
Sbjct: 836 KLGLDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPE 895
Query: 899 LQGLKTLKVAFHYATKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHPNAELRLLEVFYH 958
LQGLKTLKVAFH+ATK+EVV H IRLPKQSTVGDV+++LKTKVELSHP+AELRLLEVFYH
Sbjct: 896 LQGLKTLKVAFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRLLEVFYH 955
Query: 959 KIYKVFPPNEKIENINDQYWTLRAEEIPEEEKNVGPHDRLIHVYHFTKDTAQNQMQIQNF 1018
KIYK+FP E+IENINDQYWTLRAEEIPEEEKN+GP+DRLI VYHF K+T QNQ Q+QNF
Sbjct: 956 KIYKIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQ-QVQNF 1014
Query: 1019 GEPFFLVIHEGETLSEIKERIQKKLQVPEEEFGKWKFAFVSLGRPEYLSDSDIVSSRFQR 1078
GEPFFLVIHEGETL EIK RIQKKL V +E+F KWKFAF+S+GRPEYL D+D+V +RFQR
Sbjct: 1015 GEPFFLVIHEGETLEEIKNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDTDVVYNRFQR 1074
Query: 1079 RDVYGAWEQYFGLEHTDNAPKRSYAVNQNRHTFEKPVKIYN 1119
RDVYGA+EQY GLEH D PKR+YA NQNRH +EKPVKIYN
Sbjct: 1075 RDVYGAFEQYLGLEHADTTPKRAYAANQNRHAYEKPVKIYN 1115
>AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1114
Length = 1114
Score = 1823 bits (4721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 873/1119 (78%), Positives = 978/1119 (87%), Gaps = 5/1119 (0%)
Query: 1 MTVMMSAPIDQQDDEEVLVPHADLPENNHQPMDVVAQPETANAVESQPVAEPPPTSRFTW 60
MT+M P+DQ+D EE+LVP+ DL E QPM+V A AVE+ P E PP+ +FTW
Sbjct: 1 MTMMTPPPLDQED-EEMLVPNPDLVEGP-QPMEVAQTDPAATAVENPP-PEDPPSLKFTW 57
Query: 61 RIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSASLPYGWSRYAQ 120
I FTRLNT+K YS++FVVGGYKWR+LIFPKGNNVD+LSMYLDVAD+A+LPYGWSRY+Q
Sbjct: 58 TIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAANLPYGWSRYSQ 117
Query: 121 FSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLLIEAEV 180
FSLAVVNQ+ N+Y++RK+TQHQFNARESDWGFTSFMPL ELY+P+RGYLVNDT+LIEAEV
Sbjct: 118 FSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVNDTVLIEAEV 177
Query: 181 LVRRIVDYWNYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPS 240
VR+++DYW+YDSKKETG+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND P+
Sbjct: 178 AVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPT 237
Query: 241 GSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKG 300
SIPLALQSLFYKLQY+DTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKG
Sbjct: 238 ASIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKG 297
Query: 301 TVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERL 360
TVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGC+DVYASFDKYVEVERL
Sbjct: 298 TVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERL 357
Query: 361 EGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPSELDL 420
EGDNKYHAE + LQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFP +LDL
Sbjct: 358 EGDNKYHAEGHDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDL 417
Query: 421 DREDGKYLSPDADRSVRNLYTXXXXXXXXXXXXXXXYYAFIRPTLSEQWYKFDDERVTKE 480
DREDG+YLSPDAD+SVRNLYT YYAFIRPTLS+QWYKFDDERVTKE
Sbjct: 418 DREDGRYLSPDADKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKE 477
Query: 481 DNKRALEEQYGGEEELPQTNPGFNNAPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIA 540
D KRALEEQYGGEEELPQ NPGFNN PFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIA
Sbjct: 478 DVKRALEEQYGGEEELPQNNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIA 537
Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXHLYTIIKVARNEDLGEQIGKDIYFDLVDHDKVRSFR 600
HL+T IKVAR++D+ EQIGK+IYFDLVDH+KVRSFR
Sbjct: 538 EHLRVRLKKEQEEKEDKRKYKAQAHLFTTIKVARDDDITEQIGKNIYFDLVDHEKVRSFR 597
Query: 601 VQKQMSLNVFKEEVAKEFGVPVQFQRYWLWAKRQNHTYRPNRPLTPAEEAQSVGQLREVS 660
+QKQ FKEEVAKEFGVPVQ QR+W+WAKRQNHTYRPNRPL+P EE Q+VGQ+RE S
Sbjct: 598 IQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLSPNEELQTVGQIREAS 657
Query: 661 NKVHNGELKLFLEVECGMDSHPIAPPDKTKDDILLFFKLYDPEKEELRYVGRLFVKCTGK 720
NK +N ELKLFLE+E G D PI PP+KT +DILLFFKLYDPE LRYVGRL VK + K
Sbjct: 658 NKANNAELKLFLEIERGPDDLPIPPPEKTSEDILLFFKLYDPENAVLRYVGRLMVKSSSK 717
Query: 721 PSEILTKLNEMAGYDPEEDIALYEEIKFEPNVMCEPIDKKATFRASQLEDGDIVCFQKAP 780
P +I+ +LN+MAG+ P+E+I L+EEIKFEP VMCE IDKK +FR Q+EDGDI+C+QK
Sbjct: 718 PMDIVGQLNKMAGFAPDEEIELFEEIKFEPCVMCEQIDKKTSFRLCQIEDGDIICYQKPL 777
Query: 781 PVDGEEHFRYPDVPSYLEYVHNRQVVHFRSLDRPKEDDFFLEMSRLYTYDDVVEKVAHQL 840
++ E FRYPDVPS+LEYV NR++V FR+L++PKED+F +E+S+L+TYDDVVE+VA +L
Sbjct: 778 SIE-ESEFRYPDVPSFLEYVQNRELVRFRTLEKPKEDEFTMELSKLHTYDDVVERVAEKL 836
Query: 841 GLDDPSKIRLTPHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPELQ 900
GLDDPSK+RLT HNCYSQQPKPQPIKYRGV+HLSDMLVHYNQTSDILYYEVLDIPLPELQ
Sbjct: 837 GLDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQ 896
Query: 901 GLKTLKVAFHYATKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHPNAELRLLEVFYHKI 960
GLKTLKVAFH ATKDEV+ H IRLPKQSTVGDV+++LKTKVELSH +AELRLLEVF+HKI
Sbjct: 897 GLKTLKVAFHSATKDEVIIHNIRLPKQSTVGDVINELKTKVELSHQDAELRLLEVFFHKI 956
Query: 961 YKVFPPNEKIENINDQYWTLRAEEIPEEEKNVGPHDRLIHVYHFTKDTAQNQMQIQNFGE 1020
YK+FP E+IENINDQYWTLRAEEIPEEEKN+GP+DRLIHVYHFTK+ QNQ Q+QNFGE
Sbjct: 957 YKIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLIHVYHFTKEAGQNQ-QVQNFGE 1015
Query: 1021 PFFLVIHEGETLSEIKERIQKKLQVPEEEFGKWKFAFVSLGRPEYLSDSDIVSSRFQRRD 1080
PFFLVIHEGETL EIK RIQKKL VP+E+F KWKFA S+GRP+YL D+D+V +RFQRRD
Sbjct: 1016 PFFLVIHEGETLEEIKTRIQKKLHVPDEDFAKWKFASFSMGRPDYLLDTDVVYNRFQRRD 1075
Query: 1081 VYGAWEQYFGLEHTDNAPKRSYAVNQNRHTFEKPVKIYN 1119
VYGAWEQY GLEH DNAPKR+YA NQNRH +EKPVKIYN
Sbjct: 1076 VYGAWEQYLGLEHIDNAPKRAYAANQNRHAYEKPVKIYN 1114
>AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2020682-2027834 REVERSE LENGTH=985
Length = 985
Score = 1614 bits (4180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 786/987 (79%), Positives = 863/987 (87%), Gaps = 6/987 (0%)
Query: 1 MTVMMSAPIDQQDDEEVLVPHADLPENNHQPMDVVAQPETA-NAVESQPVAEPPPTSRFT 59
MT+M P+DQ +DEE+LVP++DL + QPM+V QPETA + VE+QP AE PPT +FT
Sbjct: 1 MTMMTPPPVDQPEDEEMLVPNSDLVDGPAQPMEV-TQPETAASTVENQP-AEDPPTLKFT 58
Query: 60 WRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSASLPYGWSRYA 119
W I NF+R NT+K YS++FVVGGYKWR+LIFPKGNNVD+LSMYLDV+D+ASLPYGWSRYA
Sbjct: 59 WTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAASLPYGWSRYA 118
Query: 120 QFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLLIEAE 179
QFSLAVVNQI +YTVRK+TQHQFNARESDWGFTSFMPL ELYDPSRGYLVNDT+L+EAE
Sbjct: 119 QFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAE 178
Query: 180 VLVRRIVDYWNYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMP 239
V VR+++DYW+YDSKKETG+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND P
Sbjct: 179 VAVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAP 238
Query: 240 SGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMK 299
+ SIPLALQSLFYKLQY+DTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMK
Sbjct: 239 TASIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMK 298
Query: 300 GTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVER 359
GTVVEGTIQ+LFEGHHMNYIECINVD+KSTRKESFYDLQLDVKGC+DVYASFDKYVEVER
Sbjct: 299 GTVVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVER 358
Query: 360 LEGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPSELD 419
LEGDNKYHAE +GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFP ELD
Sbjct: 359 LEGDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELD 418
Query: 420 LDREDGKYLSPDADRSVRNLYTXXXXXXXXXXXXXXXYYAFIRPTLSEQWYKFDDERVTK 479
LDREDGKYLSPDADRSVRNLYT YYAFIRPTLS+QWYKFDDERVTK
Sbjct: 419 LDREDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTK 478
Query: 480 EDNKRALEEQYGGEEELPQTNPGF-NNAPFKFTKYSNAYMLVYIRESDKDKIICNVDEKD 538
ED KRALEEQYGGEEELPQTNPGF NN PFKFTKYSNAYMLVYIRESDKDKIICNVDEKD
Sbjct: 479 EDLKRALEEQYGGEEELPQTNPGFNNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKD 538
Query: 539 IAXXXXXXXXXXXXXXXXXXXXXXXXHLYTIIKVARNEDLGEQIGKDIYFDLVDHDKVRS 598
IA HLYTIIKVAR+EDL EQIGKDIYFDLVDHDKVRS
Sbjct: 539 IAEHLRVRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGKDIYFDLVDHDKVRS 598
Query: 599 FRVQKQMSLNVFKEEVAKEFGVPVQFQRYWLWAKRQNHTYRPNRPLTPAEEAQSVGQLRE 658
FR+QKQ FKEEVAKEFGVPVQ QR+W+WAKRQNHTYRPNRPLTP EE Q VGQ+RE
Sbjct: 599 FRIQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIRE 658
Query: 659 VSNKVHNGELKLFLEVECGMDSHPIAPPDKTKDDILLFFKLYDPEKEELRYVGRLFVKCT 718
SNK + ELKLFLEVE +D PI PP+K+K+DILLFFKLYDPEK L Y GRL VK +
Sbjct: 659 ASNKANTAELKLFLEVE-HLDLRPIPPPEKSKEDILLFFKLYDPEKAVLSYAGRLMVKSS 717
Query: 719 GKPSEILTKLNEMAGYDPEEDIALYEEIKFEPNVMCEPIDKKATFRASQLEDGDIVCFQK 778
KP +I KLNEM G+ P+E+I L+EEIKFEP VMCE +DKK +FR Q+EDGDI+CFQK
Sbjct: 718 SKPMDITGKLNEMVGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGDIICFQK 777
Query: 779 APPVDGEEHFRYPDVPSYLEYVHNRQVVHFRSLDRPKEDDFFLEMSRLYTYDDVVEKVAH 838
P V+ E YP VPS+LEYV NRQ+V FR+L++PKED+F LE+S+ +TYDDVVEKVA
Sbjct: 778 -PLVNKEIECLYPAVPSFLEYVQNRQLVRFRALEKPKEDEFVLELSKQHTYDDVVEKVAE 836
Query: 839 QLGLDDPSKIRLTPHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPE 898
+LGLDDPSK+RLT HNCYSQQPKPQPIKYRGV+HLSDMLVHYNQTSDILYYEVLDIPLPE
Sbjct: 837 KLGLDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPE 896
Query: 899 LQGLKTLKVAFHYATKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHPNAELRLLEVFYH 958
LQGLKTLKVAFH+ATK+EVV H IRLPKQSTVGDV+++LKTKVELSHP+AELRLLEVFYH
Sbjct: 897 LQGLKTLKVAFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRLLEVFYH 956
Query: 959 KIYKVFPPNEKIENINDQYWTLRAEEI 985
KIYK+FP E+IENINDQYWTLRAEE+
Sbjct: 957 KIYKIFPSTERIENINDQYWTLRAEEV 983
>AT3G58250.1 | Symbols: | TRAF-like family protein |
chr3:21570745-21572143 REVERSE LENGTH=317
Length = 317
Score = 140 bits (353), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 103/165 (62%), Gaps = 7/165 (4%)
Query: 57 RFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNV--DYLSMYLDVADSASLPYG 114
+F+W I NF+ L ++K+YS+ FV+ G +WR+L FPKGN+ D+LS+YLDVA+S SLP G
Sbjct: 10 KFSWVIKNFSSLQSEKIYSDQFVIDGCRWRLLAFPKGNDTKSDHLSLYLDVAESESLPCG 69
Query: 115 WSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTL 174
W R+AQFS +VN I K + RK+T H F + SDWGFT+ +PL EL G+LV L
Sbjct: 70 WRRHAQFSFTIVNHIPEKCSQRKETIHWFCEKVSDWGFTNLVPLIELKAEDSGFLVKGEL 129
Query: 175 LIEAEVLVRRIVDYWNY---DSKKETGYVGLKNQGATCYMNSLLQ 216
I E+ V ++ N +S G+ L +Q Y+ SL +
Sbjct: 130 KIVVEIEVLEVIGLLNVSESESMDVNGFHVLPSQAK--YVKSLFE 172
>AT3G58270.2 | Symbols: | Arabidopsis phospholipase-like protein
(PEARLI 4) with TRAF-like domain |
chr3:21576033-21577655 REVERSE LENGTH=343
Length = 343
Score = 131 bits (329), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 88/131 (67%)
Query: 56 SRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSASLPYGW 115
++FTW I NF+ ++K YS+ F V G KWR+L FPKGN V+ LS+YL VA S LP GW
Sbjct: 7 NKFTWVIKNFSSQQSRKNYSDEFFVDGCKWRLLAFPKGNGVEKLSLYLAVAGSEFLPDGW 66
Query: 116 SRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLL 175
R+A F +VVNQ+ ++ + ++T++ F+A SDWGFTS + L +L+D G+LVN L
Sbjct: 67 RRHAYFHFSVVNQLSDELSQARETKNWFDASTSDWGFTSMLSLKKLHDKDGGFLVNGELK 126
Query: 176 IEAEVLVRRIV 186
I +V V ++
Sbjct: 127 IVVDVSVLEVI 137
>AT3G58270.1 | Symbols: | Arabidopsis phospholipase-like protein
(PEARLI 4) with TRAF-like domain |
chr3:21576033-21577655 REVERSE LENGTH=343
Length = 343
Score = 131 bits (329), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 88/131 (67%)
Query: 56 SRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSASLPYGW 115
++FTW I NF+ ++K YS+ F V G KWR+L FPKGN V+ LS+YL VA S LP GW
Sbjct: 7 NKFTWVIKNFSSQQSRKNYSDEFFVDGCKWRLLAFPKGNGVEKLSLYLAVAGSEFLPDGW 66
Query: 116 SRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLL 175
R+A F +VVNQ+ ++ + ++T++ F+A SDWGFTS + L +L+D G+LVN L
Sbjct: 67 RRHAYFHFSVVNQLSDELSQARETKNWFDASTSDWGFTSMLSLKKLHDKDGGFLVNGELK 126
Query: 176 IEAEVLVRRIV 186
I +V V ++
Sbjct: 127 IVVDVSVLEVI 137
>AT3G58360.1 | Symbols: | TRAF-like family protein |
chr3:21593505-21594866 REVERSE LENGTH=298
Length = 298
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 90/146 (61%), Gaps = 2/146 (1%)
Query: 55 TSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSASLPYG 114
+ TW I+NF+ L++KK+YS+ F+VGG KWR L++PKGNNVDYL +YL+VAD SL
Sbjct: 6 AKKITWAIENFSSLHSKKIYSDPFIVGGCKWRFLVYPKGNNVDYLFLYLEVADYESLSPE 65
Query: 115 WSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTL 174
W R+A++ L VVNQ K + + + Q F+ + WG S PL E+ G+LVN L
Sbjct: 66 WRRHARYLLNVVNQNSVKRSKQNEEQKWFDVQSPRWGRLSMFPLNEINAKDSGFLVNGEL 125
Query: 175 LIEAEVLVRRIVDYWNYDSKKETGYV 200
I AE+ V ++ D +ET +
Sbjct: 126 KIVAEIEVLEVIG--KLDVSEETSTI 149
>AT3G58340.1 | Symbols: | TRAF-like family protein |
chr3:21589071-21590401 REVERSE LENGTH=325
Length = 325
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 80/124 (64%)
Query: 57 RFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSASLPYGWS 116
+F W I NF+ LN+++ +S V+G KWR++ FPKG DYLS+YL+VAD SLP GW
Sbjct: 8 KFCWEIKNFSSLNSERCHSVPVVIGDCKWRLVAFPKGYKADYLSLYLEVADFKSLPSGWR 67
Query: 117 RYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLLI 176
RY +F +VNQ+ + +V+++TQ F+ WGF + + L EL G+LVN ++I
Sbjct: 68 RYVKFRACIVNQLSQELSVQQETQRWFDQNAPGWGFENMLLLTELNAKDGGFLVNGQVMI 127
Query: 177 EAEV 180
AEV
Sbjct: 128 VAEV 131
>AT3G58210.1 | Symbols: | TRAF-like family protein |
chr3:21562645-21564067 REVERSE LENGTH=330
Length = 330
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 88/133 (66%), Gaps = 2/133 (1%)
Query: 56 SRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNV--DYLSMYLDVADSASLPY 113
++FTW I NF+ ++ + S FV+GG KWR+L++P+G N D+LS++L+VAD SLP
Sbjct: 7 NKFTWVIQNFSSSQSRVVPSNQFVIGGCKWRLLVYPEGFNKSGDHLSLFLEVADPRSLPP 66
Query: 114 GWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDT 173
GWSR+A++ L +VNQ +K + R + FN + WG ++ +PL +L+ G+LVND
Sbjct: 67 GWSRHARYLLTIVNQHSDKISKRNEATKWFNQKIPGWGLSAMIPLTKLHAKDGGFLVNDE 126
Query: 174 LLIEAEVLVRRIV 186
L I AEV V ++
Sbjct: 127 LKIVAEVNVLEVI 139
>AT3G58410.1 | Symbols: | TRAF-like family protein |
chr3:21604871-21606229 REVERSE LENGTH=328
Length = 328
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 75/140 (53%), Gaps = 17/140 (12%)
Query: 57 RFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSASLPYGWS 116
+F W I NF+ L KK YS F +G KWR+ I+PKGNN DYLS++L+VAD SLP GW
Sbjct: 29 KFAWVIKNFSSLQCKKFYSVPFQIGDCKWRLSIYPKGNNCDYLSLFLEVADFKSLPSGWR 88
Query: 117 RYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLLI 176
RY + L +V Q WGF +PL +L+D G+LVN L+I
Sbjct: 89 RYVKLRLYIVKQ-----------------EMWGWGFLYMLPLTKLHDEKEGFLVNGELMI 131
Query: 177 EAEVLVRRIVDYWNYDSKKE 196
AEV +D N + E
Sbjct: 132 VAEVDALGFIDPLNESEESE 151
>AT3G58260.1 | Symbols: | TRAF-like family protein |
chr3:21573754-21575114 REVERSE LENGTH=321
Length = 321
Score = 110 bits (274), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 116/235 (49%), Gaps = 44/235 (18%)
Query: 58 FTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVD---YLSMYLDVADSA-SLPY 113
FTW I N + L ++ S+IFVVGG KWR++ +P+ N+ D LS+YL V D SLP
Sbjct: 9 FTWVIKNLSTLQGLEVRSKIFVVGGCKWRLIAYPEVNDADGYLSLSVYLGVPDCCESLPS 68
Query: 114 GWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDT 173
GW R+A+FSL +VNQ+ + ++TQ F+ WGF + L ++ D G+LVND
Sbjct: 69 GWKRHAKFSLTIVNQLSEGLSQVQETQAWFDENAPGWGFPPMLNLKDVSDKYGGFLVNDE 128
Query: 174 LLIEAEVLVRRIVDYWNYDSKKET----GY-----------------------VGLKNQG 206
+++ V V +V + E+ G+ +KNQ
Sbjct: 129 VMVAVAVDVIEVVGSLDAPEMSESMDIKGFKVLPSQVKSVNRLFESHPDIASKFSIKNQS 188
Query: 207 -ATCYMNSLL---QTLYHIPYFRKAVYHMPTTENDMPSGSIPLA-LQSLFYKLQY 256
T YMN LL +TL+ P M +E+D+ LA ++S+ +KL +
Sbjct: 189 LKTAYMNVLLCLAETLHQSP--------MEISEDDLSDAKTTLAYMKSVGFKLDW 235
>AT3G58350.1 | Symbols: RTM3 | RESTRICTED TEV MOVEMENT 3 |
chr3:21591618-21592836 REVERSE LENGTH=301
Length = 301
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 80/133 (60%), Gaps = 3/133 (2%)
Query: 57 RFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKG-NNVDYLSMYLDVADSASLPYGW 115
+ TW I NF L + +YS+ FVVGG KW + +PKG NN + LS++L VA SLP GW
Sbjct: 8 KITWTIKNFASLLSDLIYSDHFVVGGCKWHLRAYPKGYNNANSLSLFLGVAVPTSLPSGW 67
Query: 116 SRYAQFSLAVVNQIQNKYTVRK--DTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDT 173
R+ +F L +VNQ+ +K + K + + F+ + ++WG +S PL E++ G+L+N
Sbjct: 68 RRHTKFRLTLVNQLSDKLSQSKLNELEQWFDEKTTNWGLSSMCPLNEIHAKDSGFLLNGE 127
Query: 174 LLIEAEVLVRRIV 186
L I E+ V +
Sbjct: 128 LKIVVEIKVLETI 140
>AT3G27040.1 | Symbols: | Meprin and TRAF (MATH) homology
domain-containing protein | chr3:9974912-9977927 REVERSE
LENGTH=358
Length = 358
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 82/142 (57%), Gaps = 1/142 (0%)
Query: 46 SQPVAEPPPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNV-DYLSMYLD 104
S+ + +FTW I N+ L + +YS+ F G KWR+L FPKGNN+ DY +Y+
Sbjct: 85 SRTMGNHQADKKFTWVIKNYNSLGSGSVYSDTFKAGRCKWRLLAFPKGNNIYDYFFLYIC 144
Query: 105 VADSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDP 164
V +S SLP GW R A+ S +VNQI + +++ + F+ +++ GF S L E+
Sbjct: 145 VPNSESLPSGWRRRAKVSFTMVNQIPGGLSQQREAVYWFDEKDTTHGFESMFLLSEIQSS 204
Query: 165 SRGYLVNDTLLIEAEVLVRRIV 186
+G+LVN + I AEV V ++
Sbjct: 205 DKGFLVNGEVKIVAEVDVLEVI 226
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 57 RFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNN--VDYLSMYLDVADSASLPYG 114
+F W I NF L+T ++YS+ F G KWR++ +PK + S++L V DS SLP G
Sbjct: 9 KFAWVIKNFNSLDTTRVYSDTFKAGRCKWRLVAYPKRRDRYTTSFSLFLCVPDSESLPSG 68
Query: 115 WSRYAQF 121
W R A+
Sbjct: 69 WRRRAKL 75
>AT2G05420.1 | Symbols: | TRAF-like family protein |
chr2:1983901-1985341 FORWARD LENGTH=297
Length = 297
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 84/137 (61%), Gaps = 9/137 (6%)
Query: 58 FTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGN--------NVDYLSMYLDVADSA 109
TW I+NF+ L + ++S+ FVVG KWR+ +PKGN + L++YL+VA+S
Sbjct: 10 ITWVIENFSSLQSASIHSDQFVVGDCKWRLKAYPKGNEKATYLAYRANNLALYLNVANSK 69
Query: 110 SLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYL 169
S P GW+R+ +FSL +VNQ K + ++QH F+ + + GF + +PL L+ + G+L
Sbjct: 70 SFPIGWTRHTKFSLTLVNQKSEKLSKLTESQHWFDHKSTSRGFPAMIPLTNLH-TNEGFL 128
Query: 170 VNDTLLIEAEVLVRRIV 186
VN L + A+V V +V
Sbjct: 129 VNGELTLVAKVEVLEVV 145
>AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specific
protease 26 | chr3:18380942-18386662 REVERSE LENGTH=1067
Length = 1067
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 149/361 (41%), Gaps = 46/361 (12%)
Query: 196 ETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQ 255
E+ GL N GATCY NS+LQ LY FR+ V+ + + + + + LF +L
Sbjct: 102 ESTPAGLTNLGATCYANSILQCLYMNTAFREGVFSVEV--HVLKQNPVLDQIARLFAQLH 159
Query: 256 YSDTS-VATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKM--KGTVVEGTIQKLFE 312
S S V + K+ D+ +Q D E +L LE + G + +Q LF
Sbjct: 160 ASQKSFVDSDAFVKTL---ELDNGVQQDTHEFLTLLLSLLERCLLHSGVKAKTIVQDLFS 216
Query: 313 G---HHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAE 369
G H +C S++ E FY L+L+VKG + + AS + Y+ +E+L GDN+Y
Sbjct: 217 GSVSHVTTCSKCGRDSEASSKMEDFYALELNVKGLKSLDASLNDYLSLEQLNGDNQYFCG 276
Query: 370 QYGLQ-DAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPSELDLDREDGKYL 428
+ DA + + PPV+ QLKR + KI + FP LD+ G L
Sbjct: 277 SCNARVDATRCIKLRTLPPVITFQLKRCIFLPKTTAKKKITSSFSFPQVLDM----GSRL 332
Query: 429 SPDADRSVRNLYT---XXXXXXXXXXXXXXXYYAFIRPTLSEQWYKFDDERVTKEDNKRA 485
+ S +N T Y A I+ + W++FDDE V+ E KR
Sbjct: 333 A----ESSQNKLTYDLSAVLIHKGSAVNSGHYVAHIKDEKTGLWWEFDDEHVS-ELGKRP 387
Query: 486 LEEQYGGEEELPQTNPGFNNAPFKFT-------------------KYSNAYMLVYIRESD 526
E PQ+ + T S+AYML+Y D
Sbjct: 388 CNE---ASSSTPQSESNGTASSGNITDGIQSGSSDCRSAIKSEVFSSSDAYMLMYSLRCD 444
Query: 527 K 527
K
Sbjct: 445 K 445
>AT3G58200.1 | Symbols: | TRAF-like family protein |
chr3:21560086-21561358 REVERSE LENGTH=319
Length = 319
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 74/120 (61%), Gaps = 1/120 (0%)
Query: 51 EPPPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKG-NNVDYLSMYLDVADSA 109
E ++F W I NF+ L +++++S+IFVVG KWR++ +PKG + S++L V D
Sbjct: 2 EKEADNKFRWVIKNFSSLGSERVFSDIFVVGSCKWRLMAYPKGVRDNRCFSLFLVVTDFK 61
Query: 110 SLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYL 169
+LP W R+ + L VVNQ+ + ++ K+TQ F+ + WGF + +PL EL + G+L
Sbjct: 62 TLPCDWKRHTRLRLNVVNQLSEELSILKETQMWFDQKTPAWGFLAMLPLTELKAENGGFL 121
>AT2G01790.1 | Symbols: | TRAF-like family protein |
chr2:341322-342480 REVERSE LENGTH=269
Length = 269
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 79/130 (60%), Gaps = 3/130 (2%)
Query: 60 WRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNN---VDYLSMYLDVADSASLPYGWS 116
W I+NF+ L++ ++YS+IFVVGG KW +L P+GNN DY S+YL V DS LP GW
Sbjct: 11 WVINNFSFLDSDRVYSDIFVVGGCKWCLLALPEGNNNYIYDYFSLYLCVPDSEYLPSGWR 70
Query: 117 RYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLLI 176
R A+ S +VNQ+ + + +++ + F+ + + GF S L +G+LVN + I
Sbjct: 71 RRAKVSFTMVNQVTGELSQQQEGVYWFDEKNTTQGFGSMFRLLVFQSSYKGFLVNGEVDI 130
Query: 177 EAEVLVRRIV 186
AEV V ++
Sbjct: 131 VAEVDVVEVI 140
>AT2G25320.1 | Symbols: | TRAF-like family protein |
chr2:10781951-10788065 REVERSE LENGTH=1673
Length = 1673
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 80/128 (62%), Gaps = 5/128 (3%)
Query: 60 WRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNV---DYLSMYLDVAD-SASLPYGW 115
W +++FTR+ K L+S+ F VGGY R+L++P+G++ Y+S+YL + D + W
Sbjct: 75 WTVESFTRVKAKALWSKYFDVGGYDCRLLVYPRGDSQALPGYISIYLQIMDPRGTTSSRW 134
Query: 116 SRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLV-NDTL 174
+A + L++VN + + T+ KD+ H+F++++ G+ F + DP G+L ND+L
Sbjct: 135 DCFASYRLSIVNLVDDSLTIHKDSWHRFSSKKKSHGWCDFTLNSSILDPKMGFLFNNDSL 194
Query: 175 LIEAEVLV 182
LI A++L+
Sbjct: 195 LITADILI 202
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 83/137 (60%), Gaps = 12/137 (8%)
Query: 57 RFTWRIDNFTRLN--TKK-------LYSEIFVVGGYKWRVLIFPKGNNVD--YLSMYLDV 105
+FTWRI+NFTRL KK + S+ F +G R++++P+G + +LS++L+V
Sbjct: 404 KFTWRIENFTRLKDLLKKRKITGLCIKSKRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEV 463
Query: 106 ADSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPS 165
DS S WS + L+VVNQ + +V K++Q++++ DWG+ F+ L L+D
Sbjct: 464 TDSRS-SSDWSCFVSHRLSVVNQRLEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQD 522
Query: 166 RGYLVNDTLLIEAEVLV 182
G+LV DT++ AEVL+
Sbjct: 523 SGFLVQDTVVFSAEVLI 539
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Query: 37 QPETANAVESQPVAEPPPTSRFTWRIDNFTR----LNTKKLYSEIFVVGGYKWRVLIFPK 92
+ ++ N+V P S FTW+++NF + T+K++S+ F GG + R+ ++
Sbjct: 551 EADSTNSV--SPTDNSVKKSSFTWKVENFLAFKEIMETRKIFSKFFQAGGCELRIGVY-- 606
Query: 93 GNNVDYLSMYLDVADSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGF 152
+ D + +YL+ SA + + ++ + ++NQ +V K++ + +
Sbjct: 607 -ESFDTICIYLESDQSAGTDVDNNFWVKYKMGILNQKNPAKSVWKESS--ICTKTWNNSV 663
Query: 153 TSFMPLGELYDPSRGYLVNDTLLIEAEVL 181
FM + ++ + G+LV DT++ E+L
Sbjct: 664 LQFMKVSDMLEADAGFLVRDTVVFVCEIL 692
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 84/174 (48%), Gaps = 18/174 (10%)
Query: 49 VAEPPP---TSRFTWRIDNFT----RLNTKKLYSEIFVVGGYKWRVLIFPK-GNNVDYLS 100
+A P P + +FTW+++NF+ + T+K+ S +F G R+ ++ N+ +Y+S
Sbjct: 226 IAGPMPDVLSGKFTWKVNNFSLFKDMIKTQKIMSPVFPAGECNLRISVYQSVVNSQEYIS 285
Query: 101 MYLDVADS-ASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNA-----RESDWGFTS 154
M L+ ++ +L S + F ++ +NQ + +D+ +F A + G+
Sbjct: 286 MCLESKETEKTLVSDRSCWCLFRMSALNQKPGCTHMHRDSYGRFAADNKSGDNTSLGWND 345
Query: 155 FMPLGELYDPSRGYLVNDTLLIEAEVLVRRIVDYWNYDSKKETGYVGLKNQGAT 208
+M + E +P G+L++D + V I ++ ++ K G +G +N
Sbjct: 346 YMKMSEFVNPEAGFLLDDMAVFSTSFHV--IKEFSSF--TKNGGLIGGRNGAGA 395
>AT1G31390.1 | Symbols: | TRAF-like family protein |
chr1:11243191-11244392 REVERSE LENGTH=268
Length = 268
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 72/118 (61%), Gaps = 3/118 (2%)
Query: 57 RFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVD---YLSMYLDVADSASLPY 113
+ TW I NF+ + ++ + S+IFVVG KW ++ +PKGN LS+YL+VAD SLP
Sbjct: 8 KITWTIKNFSFVQSQAIDSDIFVVGDSKWHLVAYPKGNGESTNKCLSLYLNVADFQSLPN 67
Query: 114 GWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVN 171
GW R+ ++ L VVNQ+ K + ++ Q F GF + +PL +L D + G+LVN
Sbjct: 68 GWKRHIKYRLTVVNQMSEKLSEQEVIQGWFYKNFHISGFQTMLPLSKLLDKNGGFLVN 125
>AT5G43560.2 | Symbols: | TRAF-like superfamily protein |
chr5:17501043-17505526 FORWARD LENGTH=1055
Length = 1055
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 113/203 (55%), Gaps = 28/203 (13%)
Query: 9 IDQQDDEEVLVPHADLPENNH----QPMDVVAQPETANAVES-QPVAEPP---------- 53
+ + +E+ + L EN++ Q + +A+ ++ VE+ P PP
Sbjct: 1 MSESTNEDSGAGRSSLEENSNGQRSQSEEAIAEWRSSEQVENGTPSTSPPYWDIDDDDDF 60
Query: 54 ---PTSRF---TWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNV-DYLSMYLDVA 106
P+ F TW I+ F+ +N ++L ++F VGGYKW +LI+P+G +V ++LS++L VA
Sbjct: 61 GSKPSQLFGKNTWTIEKFSDINKRELRGDVFEVGGYKWYILIYPQGCDVCNHLSLFLCVA 120
Query: 107 DSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSR 166
L GWS +AQF++AV N+ K + DT H+F +E DWG+ F+ L +L +
Sbjct: 121 HHEKLLPGWSHFAQFTIAVSNK-DPKKSKHSDTLHRFWKKEHDWGWKKFIELPKLKE--- 176
Query: 167 GYLVND-TLLIEAEV-LVRRIVD 187
G++ + L I+A+V ++R VD
Sbjct: 177 GFIDDSGCLTIKAQVQVIRERVD 199
>AT5G43560.1 | Symbols: | TRAF-like superfamily protein |
chr5:17501043-17505526 FORWARD LENGTH=1055
Length = 1055
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 113/203 (55%), Gaps = 28/203 (13%)
Query: 9 IDQQDDEEVLVPHADLPENNH----QPMDVVAQPETANAVES-QPVAEPP---------- 53
+ + +E+ + L EN++ Q + +A+ ++ VE+ P PP
Sbjct: 1 MSESTNEDSGAGRSSLEENSNGQRSQSEEAIAEWRSSEQVENGTPSTSPPYWDIDDDDDF 60
Query: 54 ---PTSRF---TWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNV-DYLSMYLDVA 106
P+ F TW I+ F+ +N ++L ++F VGGYKW +LI+P+G +V ++LS++L VA
Sbjct: 61 GSKPSQLFGKNTWTIEKFSDINKRELRGDVFEVGGYKWYILIYPQGCDVCNHLSLFLCVA 120
Query: 107 DSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSR 166
L GWS +AQF++AV N+ K + DT H+F +E DWG+ F+ L +L +
Sbjct: 121 HHEKLLPGWSHFAQFTIAVSNK-DPKKSKHSDTLHRFWKKEHDWGWKKFIELPKLKE--- 176
Query: 167 GYLVND-TLLIEAEV-LVRRIVD 187
G++ + L I+A+V ++R VD
Sbjct: 177 GFIDDSGCLTIKAQVQVIRERVD 199
>AT3G44790.1 | Symbols: | TRAF-like family protein |
chr3:16328792-16330265 FORWARD LENGTH=324
Length = 324
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 79/131 (60%), Gaps = 5/131 (3%)
Query: 57 RFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKG-NNVDYLSMYLDVADSASLPYGW 115
+FTW I NF+ L +K + S+ FV+GG KW F KG N +YLS++L VA S +LP GW
Sbjct: 5 KFTWVIKNFSSLQSKYINSDKFVIGGCKW----FLKGYQNANYLSLFLMVATSKTLPCGW 60
Query: 116 SRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLL 175
RY +F L VVNQ+ ++ + +++T+ F+ G + L +L G+LVN+ +
Sbjct: 61 RRYTRFRLTVVNQLSDELSQQRETETWFDQNVVLSGNRHMISLTKLNAKKGGFLVNNEVK 120
Query: 176 IEAEVLVRRIV 186
I EV V +++
Sbjct: 121 IVVEVDVLQVI 131
>AT1G04300.1 | Symbols: | TRAF-like superfamily protein |
chr1:1148818-1153895 REVERSE LENGTH=1074
Length = 1074
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 87/134 (64%), Gaps = 7/134 (5%)
Query: 57 RFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNV-DYLSMYLDVADSASLPYGW 115
++TW+I F+ + ++ S +F GGYKW +LI+P+G +V ++LS++L VA+ L GW
Sbjct: 69 QYTWKIPKFSEITKREHRSNVFEAGGYKWYILIYPQGCDVCNHLSLFLCVANYDKLLPGW 128
Query: 116 SRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYL-VNDTL 174
S++AQF+++V++Q K DT H+F +E DWG+ FM L +L D G++ + L
Sbjct: 129 SQFAQFTISVLSQDLKKSKF-SDTLHRFWKKEHDWGWKKFMELPKLKD---GFIDESGCL 184
Query: 175 LIEAEV-LVRRIVD 187
IEA+V ++R VD
Sbjct: 185 TIEAKVQVIRERVD 198
>AT3G44800.1 | Symbols: | Meprin and TRAF (MATH) homology
domain-containing protein | chr3:16343333-16346027
FORWARD LENGTH=564
Length = 564
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 79/142 (55%), Gaps = 3/142 (2%)
Query: 57 RFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKG-NNVDYLSMYLDVADSASLPYGW 115
+FTW I NF+ L ++ + S+IFV+GG KW +L +P G N YLS+YLD +LP G
Sbjct: 5 KFTWVIKNFSSLQSEYIKSDIFVIGGCKWCLLAYPNGKQNASYLSLYLDGPTLKTLPCGC 64
Query: 116 SRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLL 175
R +F L VVNQ+ + R + + F+ + G+ + L +L G+LVN+ +
Sbjct: 65 RRRIRFRLTVVNQLSENLSRRGEGKRWFDKKLPLCGYEEVLLLTKLNAKHGGFLVNNEVK 124
Query: 176 IEAEVLVRRIVDYWNYDSKKET 197
I AEV V ++ D KE+
Sbjct: 125 IVAEVDVLEVIG--KLDVSKES 144
>AT3G58290.1 | Symbols: | TRAF-like superfamily protein |
chr3:21580572-21581861 REVERSE LENGTH=282
Length = 282
Score = 94.4 bits (233), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 12/139 (8%)
Query: 53 PPTSRFTWRIDNFTRLNTKKLY-SEIFVVGGYKWRVLIFPKG----------NNVDYLSM 101
P +F W I NF+ L + Y S+ ++ WR+ +P+G NN D+LS+
Sbjct: 7 PCDKKFVWVIKNFSSLQLQDCYVSDPVLIHDVNWRLFAYPEGSNGDHLLFKKNNGDHLSL 66
Query: 102 YLDVADSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGEL 161
YL+V D SLP GW +Y QF VVNQI +V+++ + F+ + +WG+ + L +L
Sbjct: 67 YLEV-DFESLPCGWRQYTQFRFTVVNQISEHSSVKREGRKWFDKKAPEWGWEEMISLTKL 125
Query: 162 YDPSRGYLVNDTLLIEAEV 180
D + G++VN L+I AEV
Sbjct: 126 NDINSGFVVNGELMIVAEV 144
>AT2G25330.1 | Symbols: | TRAF-like family protein |
chr2:10788946-10791331 REVERSE LENGTH=693
Length = 693
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 92/156 (58%), Gaps = 12/156 (7%)
Query: 36 AQPETANAVESQPVAEPPP-TSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGN 94
++ E+ A E V P T+ W +++FTR+ K L+S+ F VGGY R+L++P+G+
Sbjct: 25 SRDESGGAQEIVAVDRPGEYTALCRWTVESFTRVKAKALWSKYFDVGGYDCRLLVYPRGD 84
Query: 95 NV---DYLSMYLDVAD----SASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARE 147
+ +S+YL + D S+SL W +A + L+++N + + T+RK++ H+F+ ++
Sbjct: 85 SQALPGSISIYLQIIDPRGTSSSL---WDCFASYQLSIINHVDDSLTIRKNSWHRFSNKK 141
Query: 148 SDWGFTSFMPLGELYDPSRGYLV-NDTLLIEAEVLV 182
G+ F + DP G+L ND+LLI A++++
Sbjct: 142 RSHGWCDFTLNSSVLDPKMGFLFNNDSLLITADIMI 177
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 82/139 (58%), Gaps = 11/139 (7%)
Query: 57 RFTWRIDNFTRL-------NTKKLY--SEIFVVGGYKWRVLIFPKGNNV--DYLSMYLDV 105
+F+WRI+NFT L LY S+ F +G R++++P+G + +LS++L+V
Sbjct: 359 KFSWRIENFTSLVDLLEKRKITGLYIKSKRFQIGNRDCRLIVYPRGQSQPPSHLSIFLEV 418
Query: 106 ADSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPS 165
DS S WS + L+VVNQ + +V K++Q++F+ E DWG+ F+ L L+D
Sbjct: 419 TDSRSSSSDWSCFVSHRLSVVNQRSEEKSVTKESQNRFSKAEKDWGWREFVTLTSLFDQD 478
Query: 166 RGYLVNDTLLIEAEVLVRR 184
G+LV D+++ EVL+ +
Sbjct: 479 SGFLVQDSVVFSVEVLMLK 497
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 70/145 (48%), Gaps = 9/145 (6%)
Query: 41 ANAVESQPVAEPPPTSRFTWRIDNFTR----LNTKKLYSEIFVVGGYKWRVLIFPKGNNV 96
A + S + S FTW+++NF + +K++S+ F GG + R+ ++ +
Sbjct: 508 AESASSVSQIDKTVKSSFTWKVENFLAFKGIMEKRKIFSKFFQAGGCELRIGVYE---SF 564
Query: 97 DYLSMYLDVADSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFM 156
D + +YL+ SA + + ++ + ++NQ +V K++ + + FM
Sbjct: 565 DTICIYLESGQSAGNDVDNNLWVKYKMGILNQKNPAKSVWKESS--LCTKTWNNSVLLFM 622
Query: 157 PLGELYDPSRGYLVNDTLLIEAEVL 181
+ ++ + G+LV DTL+ E+L
Sbjct: 623 KVSDMLEADAGFLVRDTLVFVCEIL 647
>AT1G31400.1 | Symbols: | TRAF-like family protein |
chr1:11245225-11246481 REVERSE LENGTH=278
Length = 278
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 77/133 (57%), Gaps = 6/133 (4%)
Query: 57 RFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKG--NNVD-YLSMYLDVADSASLPY 113
R TW I NF+ L + +Y +IFVVG KW +L +PKG ++++ LS++L V D LP
Sbjct: 8 RITWTIKNFSSLQSHAIYFDIFVVGDTKWHLLAYPKGYGDSINKCLSLFLGVPDPDDLPS 67
Query: 114 GWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDT 173
GW R+ + L VVNQ+ K + ++ + F R +G +PL ELY G+LV+
Sbjct: 68 GWKRHIIYRLTVVNQMSEKLSKQEVARGGFYPRSLTFGSQVMLPLTELYG---GFLVSGQ 124
Query: 174 LLIEAEVLVRRIV 186
+ I AEV V +V
Sbjct: 125 VKIVAEVGVLEVV 137
>AT5G52330.1 | Symbols: | TRAF-like superfamily protein |
chr5:21247596-21249732 REVERSE LENGTH=397
Length = 397
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 93/152 (61%), Gaps = 10/152 (6%)
Query: 59 TWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNV-DYLSMYLDVADSASLPYGWSR 117
TW+I F++++ ++ S +F +GGY W +L++P+G +V ++LS++L VA+ L GWS+
Sbjct: 22 TWKIKKFSQISKREFASSVFEIGGYSWHILMYPEGCDVSNHLSLFLCVANHDELLPGWSQ 81
Query: 118 YAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVND-TLLI 176
AQF+++V+++ K DT H+F +E DWG+ FM L +L D G++ + L I
Sbjct: 82 LAQFTISVMHKDPKKSKF-SDTLHRFWKKEHDWGWKKFMELPKLRD---GFIDDSGCLTI 137
Query: 177 EAEV-LVRRIVD---YWNYDSKKETGYVGLKN 204
E +V ++R VD + +Y K E V +N
Sbjct: 138 ETKVQVIRDRVDRPFFLDYGYKTEIVRVYFRN 169
>AT1G04300.3 | Symbols: | TRAF-like superfamily protein |
chr1:1148818-1153895 REVERSE LENGTH=1082
Length = 1082
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 88/142 (61%), Gaps = 15/142 (10%)
Query: 57 RFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNV-DYLSMYLDVADS------- 108
++TW+I F+ + ++ S +F GGYKW +LI+P+G +V ++LS++L VA+
Sbjct: 69 QYTWKIPKFSEITKREHRSNVFEAGGYKWYILIYPQGCDVCNHLSLFLCVANYDKLLPGS 128
Query: 109 -ASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRG 167
A L GWS++AQF+++V++Q K DT H+F +E DWG+ FM L +L D G
Sbjct: 129 FAILEAGWSQFAQFTISVLSQDLKKSKF-SDTLHRFWKKEHDWGWKKFMELPKLKD---G 184
Query: 168 YL-VNDTLLIEAEV-LVRRIVD 187
++ + L IEA+V ++R VD
Sbjct: 185 FIDESGCLTIEAKVQVIRERVD 206
>AT3G58220.2 | Symbols: | TRAF-like family protein |
chr3:21564677-21566435 REVERSE LENGTH=453
Length = 453
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 80/143 (55%), Gaps = 11/143 (7%)
Query: 49 VAEPPPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNV-DYLSMYLDVAD 107
+ P + F+W I +F+ L + +YS+ FV+GG KWR++ +P GN + Y+S+Y++VAD
Sbjct: 4 IGSPLGKNEFSWVIKDFSSLGVRAIYSDEFVIGGCKWRLIAYPMGNRIKKYMSLYVEVAD 63
Query: 108 SASLPYGWSRYAQFSLAVVNQ-----IQNKYTVRKDTQHQFNARESDWGFTSFMPLGELY 162
S LP GWS + + VVN Q KY RK+ F+ + WG+ + + +L
Sbjct: 64 SKHLPSGWSINTELRMEVVNHNLYKPSQQKY--RKNL--WFDQKTPSWGYKTMIRHSKL- 118
Query: 163 DPSRGYLVNDTLLIEAEVLVRRI 185
G+LV+ + I ++ V R+
Sbjct: 119 SGEEGFLVSGEVTIVVKIDVYRV 141
>AT3G58220.1 | Symbols: | TRAF-like family protein |
chr3:21565173-21566435 REVERSE LENGTH=351
Length = 351
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 80/143 (55%), Gaps = 11/143 (7%)
Query: 49 VAEPPPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNV-DYLSMYLDVAD 107
+ P + F+W I +F+ L + +YS+ FV+GG KWR++ +P GN + Y+S+Y++VAD
Sbjct: 4 IGSPLGKNEFSWVIKDFSSLGVRAIYSDEFVIGGCKWRLIAYPMGNRIKKYMSLYVEVAD 63
Query: 108 SASLPYGWSRYAQFSLAVVNQ-----IQNKYTVRKDTQHQFNARESDWGFTSFMPLGELY 162
S LP GWS + + VVN Q KY RK+ F+ + WG+ + + +L
Sbjct: 64 SKHLPSGWSINTELRMEVVNHNLYKPSQQKY--RKNL--WFDQKTPSWGYKTMIRHSKL- 118
Query: 163 DPSRGYLVNDTLLIEAEVLVRRI 185
G+LV+ + I ++ V R+
Sbjct: 119 SGEEGFLVSGEVTIVVKIDVYRV 141
>AT3G17380.1 | Symbols: | TRAF-like family protein |
chr3:5950240-5952124 FORWARD LENGTH=309
Length = 309
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 90/145 (62%), Gaps = 8/145 (5%)
Query: 47 QPVAEPPPTSRFTWRIDNFTRLN---TKKLYSEIFVVGGYKWRVLIFPKGNNV----DYL 99
+ +++ PPT + +I++F+ L ++ +E F GGYKW+++++P GN D++
Sbjct: 12 KSISDAPPT-HYMVKIESFSLLTKHAIERYETESFEAGGYKWKLVLYPNGNKSKNTKDHV 70
Query: 100 SMYLDVADSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLG 159
S+YL +ADS+SL GW YA F L +++Q ++ Y + + + +F++ + +WGF F+P G
Sbjct: 71 SVYLSLADSSSLSPGWEVYAVFRLYLLDQNKDNYLILQGNERRFHSVKREWGFDKFIPTG 130
Query: 160 ELYDPSRGYLVNDTLLIEAEVLVRR 184
D S GYL+ DT + A+V V +
Sbjct: 131 TFSDASNGYLMEDTCMFGADVFVSK 155
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 80/155 (51%), Gaps = 4/155 (2%)
Query: 35 VAQPETANAVESQPVAEPPPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKG- 93
V++ + E + + +S+ W+I+NF++L+ + S F G KW++ +P G
Sbjct: 153 VSKERRSGRGECLSMIKDATSSKHVWKIENFSKLDKESYDSNAFFAGDRKWKIEFYPTGT 212
Query: 94 --NNVDYLSMYLDVADSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWG 151
+LS+YL + D ++ G + +F++ + +Q+Q ++ K T+ F+ S+ G
Sbjct: 213 KQGTGTHLSIYLTLVDPETISDGTKIFVEFTIRIFDQLQGRHIAGKVTK-WFSRSSSEHG 271
Query: 152 FTSFMPLGELYDPSRGYLVNDTLLIEAEVLVRRIV 186
+ ++ + P+ G L+ D L+EA+V V I
Sbjct: 272 WVKYVSMVYFTQPNSGLLLKDVCLVEADVCVHGIT 306
>AT3G58440.1 | Symbols: | TRAF-like superfamily protein |
chr3:21618446-21621249 REVERSE LENGTH=601
Length = 601
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 73/127 (57%), Gaps = 4/127 (3%)
Query: 57 RFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVD-YLSMYLDVADSASLPYGW 115
+FTW ++ F+ L + YS +F V G WR+L F KG D Y S+YLD+ + SLP GW
Sbjct: 10 KFTWVLEKFSSLK-DQCYSPVFTVAGCNWRLLSFLKGAKNDRYFSVYLDL-EPGSLPPGW 67
Query: 116 SRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLL 175
R +FS+ + N N V F+A+ + WGF F+ L +L + + G+LVND L
Sbjct: 68 RREVKFSITLDNVCPNTDRVLGGPCF-FDAKSNIWGFQDFLLLEKLVNIAEGFLVNDRLT 126
Query: 176 IEAEVLV 182
I AEV V
Sbjct: 127 IVAEVDV 133
>AT1G04300.4 | Symbols: | TRAF-like superfamily protein |
chr1:1148818-1153895 REVERSE LENGTH=1055
Length = 1055
Score = 83.2 bits (204), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 76/116 (65%), Gaps = 7/116 (6%)
Query: 75 SEIFVVGGYKWRVLIFPKGNNV-DYLSMYLDVADSASLPYGWSRYAQFSLAVVNQIQNKY 133
S +F GGYKW +LI+P+G +V ++LS++L VA+ L GWS++AQF+++V++Q K
Sbjct: 68 SNVFEAGGYKWYILIYPQGCDVCNHLSLFLCVANYDKLLPGWSQFAQFTISVLSQDLKKS 127
Query: 134 TVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYL-VNDTLLIEAEV-LVRRIVD 187
DT H+F +E DWG+ FM L +L D G++ + L IEA+V ++R VD
Sbjct: 128 KF-SDTLHRFWKKEHDWGWKKFMELPKLKD---GFIDESGCLTIEAKVQVIRERVD 179
>AT4G09780.1 | Symbols: | TRAF-like family protein |
chr4:6159538-6161378 REVERSE LENGTH=427
Length = 427
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 83/152 (54%), Gaps = 13/152 (8%)
Query: 44 VESQPVAEPPPTSRFTWRIDNFTRLNTKKL-YSEIFVVGGYKWRVLIFPKGN-NVDYLSM 101
VE + PPT++FTW+I +F++L KK YS+ FVVG KWR+ I PKG+ V LS+
Sbjct: 201 VERVVFTQNPPTNKFTWKISDFSKLGDKKYHYSDEFVVGERKWRIKISPKGDKKVRALSV 260
Query: 102 YLDVADSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQH---------QFNARESD--W 150
Y+ + + YA+ L ++NQ + ++ T F +RE + +
Sbjct: 261 YVQAMEYLPNAVASTTYAKLKLQLMNQKNTNHIEKRGTYQTSFFLYLVFHFFSREKEDGY 320
Query: 151 GFTSFMPLGELYDPSRGYLVNDTLLIEAEVLV 182
G + + + +L D S+GYLV DT+++E +L
Sbjct: 321 GTSELISVEDLNDESKGYLVEDTIVLETTLLC 352
>AT3G58240.1 | Symbols: | TRAF-like superfamily protein |
chr3:21568530-21569827 REVERSE LENGTH=317
Length = 317
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Query: 53 PPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNV-DYLSMYLDVADSASL 111
P ++FTW I NF ++ K +YS+ F++GG KW +L + K + +L + L++ D L
Sbjct: 4 PVDNKFTWVIKNFCSVSPKPIYSDQFLIGGNKWHILAYSKKRDGHQFLCLDLELVDCEFL 63
Query: 112 PYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVN 171
P W + + S VVN K + + +H FN +E G S L EL D G+LV+
Sbjct: 64 PSEWRKVVKVSFTVVNFFSKKLSRQIGLKHCFNKKERSKG-GSLFHLSELTDKKSGFLVD 122
Query: 172 DTLLIEAEVLV 182
+ I A++ V
Sbjct: 123 GEVEIVAQITV 133
>AT2G32870.1 | Symbols: | TRAF-like family protein |
chr2:13944968-13946776 REVERSE LENGTH=416
Length = 416
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 84/164 (51%), Gaps = 10/164 (6%)
Query: 34 VVAQPETANAVESQPVAE-PPPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPK 92
V P T E + E P SRFTW+I F+ + ++ S F VG +W+++++PK
Sbjct: 253 VTRIPRTMGTAERFKLIEFSPKNSRFTWKITQFSSFDGEEHSSYEFTVGPRRWKLVMYPK 312
Query: 93 GNN---VDYLSMYLDVADSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQF-----N 144
GN + LS+YL +D + A + L V++Q+ N+ + ++ F N
Sbjct: 313 GNGDGKGNSLSLYLFASDYVTNGPKGGTLAIYKLRVLDQL-NRNHCETECRYWFPYNPVN 371
Query: 145 ARESDWGFTSFMPLGELYDPSRGYLVNDTLLIEAEVLVRRIVDY 188
+S WG F+PL EL+ SRG+LVND + I E+ + +Y
Sbjct: 372 QMDSLWGRPKFLPLEELHKSSRGFLVNDQIYIGVEISIVSTTEY 415
>AT2G32880.1 | Symbols: | TRAF-like family protein |
chr2:13948953-13950505 REVERSE LENGTH=318
Length = 318
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 94/182 (51%), Gaps = 15/182 (8%)
Query: 19 VPHADLPENNHQPMDVVAQPETANAVESQPVAEPP-PTSRFTWRIDNFTRLNTKKLYSEI 77
V +A++ E V P T E + E SRFTW+I F+ N ++ S
Sbjct: 139 VFYAEISEEVIPNFLVTGIPRTMGTAERFKLIEVARNNSRFTWKITKFSSFNGEEHSSYE 198
Query: 78 FVVGGYKWRVLIFPKGNN---VDYLSMYLDVAD--SASLPYGWSRYAQFSLAVVNQI-QN 131
F VG +W+++++P+G + LS+YL+ ++ + + P G +A + L V++Q+ +N
Sbjct: 199 FTVGPRRWKLVMYPRGTGDGKGNSLSLYLNASNYVTNNGPKG-RTFAVYKLRVLDQLHRN 257
Query: 132 KYTVRKDTQHQF-----NARESDWGFTSFMPLGELYDPSRGYLVNDTLLIEAEVLVRRIV 186
+ + D Q F + R WG T F+PL EL+ SRG+LVND + I E L+
Sbjct: 258 HFEI--DCQDWFLYDPVHPRLCSWGRTKFLPLEELHKASRGFLVNDQIYIGVEFLIVSTT 315
Query: 187 DY 188
+Y
Sbjct: 316 EY 317
>AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 |
chr5:18965410-18968492 REVERSE LENGTH=732
Length = 732
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 137/351 (39%), Gaps = 39/351 (11%)
Query: 161 LYDPSRGYL---VNDTLLIEAEVLVRRIVDYWNYDSKKETGY-VGLKNQGATCYMNSLLQ 216
LY P R Y+ +D L + E + +W Y + TG GL N G TC++ S+LQ
Sbjct: 121 LYRPPRRYIEYESDDDELNKMEPTKPLQLSWW-YPRIEPTGVGAGLYNSGNTCFIASVLQ 179
Query: 217 TLYH----IPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSDTSVATKELTKSFGW 272
H I R +Y P + + + L+ S + + +
Sbjct: 180 CFTHTVPLIDSLRSFMYGNPCNCGNEKFCVMQALRDHIELALRSSGYGINIDRFRDNLTY 239
Query: 273 DTYDSFMQH--DVQELNRVLCEKLE------DKMKGTVVE---GTIQKLFEGHHMNYIEC 321
+ D + H D E + +KLE G+V + +F G M+ + C
Sbjct: 240 FSSDFMINHQEDAHEFLQSFLDKLERCCLDPKNQLGSVSSQDLNIVDNVFGGGLMSTLCC 299
Query: 322 INVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQYGLQDAKKGVL 381
N + S E L+++ ++ + + + VE+LE +Q + K+ V
Sbjct: 300 CNCNSVSNTFEPSLGWSLEIEDVNTLWKALESFTCVEKLE-------DQLTCDNCKEKVT 352
Query: 382 ------FIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPSELDLDREDGKYLSPDADRS 435
F PPV LKRF D + TM KI D EFP ELDL ++S + D
Sbjct: 353 KEKQLRFDKLPPVATFHLKRFTNDGV--TMEKIFDHIEFPLELDL----SPFMSSNHDPE 406
Query: 436 VRNLYTXXXXXXXXXXXXXXXYYAFIRPTLSEQWYKFDDERVTKEDNKRAL 486
V Y +Y+ + E W+ FDD +VT+ +R L
Sbjct: 407 VSTRYHLYAFVEHIGIRATFGHYSSYVRSAPETWHNFDDSKVTRISEERVL 457
>AT2G42460.2 | Symbols: | TRAF-like family protein |
chr2:17678018-17679247 REVERSE LENGTH=299
Length = 299
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 58 FTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNV-DYLSMYLDVADSASLPYGWS 116
FTW+I+NF+ + S +F GG + VLI PKG+ DYLS+YL V + SL GW
Sbjct: 10 FTWKIENFSGRKFP-ITSTVFSSGGCECYVLIRPKGDGFEDYLSLYLCVGNPKSLQPGWK 68
Query: 117 RYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLLI 176
R A V+NQ + + F WGF + +PL +L D R L N+TL I
Sbjct: 69 RRASLHFIVLNQSGKEVHRTSERYGLFGPEIPGWGFRTALPLTKLQD--RELLENNTLFI 126
Query: 177 EAEVLVRRIV 186
E + V +V
Sbjct: 127 EVYIKVTEVV 136
>AT2G42460.1 | Symbols: | TRAF-like family protein |
chr2:17676399-17679247 REVERSE LENGTH=442
Length = 442
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 58 FTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNV-DYLSMYLDVADSASLPYGWS 116
FTW+I+NF+ + S +F GG + VLI PKG+ DYLS+YL V + SL GW
Sbjct: 10 FTWKIENFSGRKFP-ITSTVFSSGGCECYVLIRPKGDGFEDYLSLYLCVGNPKSLQPGWK 68
Query: 117 RYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLLI 176
R A V+NQ + + F WGF + +PL +L D R L N+TL I
Sbjct: 69 RRASLHFIVLNQSGKEVHRTSERYGLFGPEIPGWGFRTALPLTKLQD--RELLENNTLFI 126
Query: 177 EAEVLVRRIV 186
E + V +V
Sbjct: 127 EVYIKVTEVV 136
>AT3G29580.1 | Symbols: | Arabidopsis phospholipase-like protein
(PEARLI 4) with TRAF-like domain |
chr3:11394675-11395871 REVERSE LENGTH=306
Length = 306
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 71/129 (55%), Gaps = 5/129 (3%)
Query: 56 SRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNV-DYLSMYLDVA-DSA-SLP 112
++FTW I N LN+ L+S FV+GG WRV+ K NN + LS+ L VA DSA +
Sbjct: 7 NKFTWVIKNVPTLNSDMLFSNYFVIGGCSWRVVAHSKENNFKESLSLTLIVAEDSAQKMG 66
Query: 113 YGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVND 172
GWSRYA+ +VNQI + R +T F+ + S + + +G+ + G++VN
Sbjct: 67 CGWSRYAKIIFTLVNQISEILSQRIET--MFDQKSSVFSSETMFSIGKFDEHFAGFIVNG 124
Query: 173 TLLIEAEVL 181
+ I E L
Sbjct: 125 EIKIVVEFL 133
>AT4G09770.2 | Symbols: | TRAF-like family protein |
chr4:6154534-6155859 REVERSE LENGTH=297
Length = 297
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 78/141 (55%), Gaps = 4/141 (2%)
Query: 44 VESQPVAEPPPTSRFTWRIDNFTRLNTKKLY-SEIFVVGGYKWRVLIFPKGN-NVDYLSM 101
VE + PP ++FTW+I +F+ + K+ Y S+ FVVG KWR+ I PKG+ V LS+
Sbjct: 147 VERVVFTQNPPENKFTWKISHFSYIGDKRYYYSDEFVVGDRKWRLKISPKGDKKVRALSV 206
Query: 102 YLDVADSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDW-GFTSFMPLGE 160
Y+ S YA+ L ++NQ +N + K H ++ D G + + + +
Sbjct: 207 YVQAMAYLPNAVASSTYAKLRLRLLNQ-KNSNHIEKRVFHFYSRENGDGSGISELISVED 265
Query: 161 LYDPSRGYLVNDTLLIEAEVL 181
L D S+GYLV D++++E +L
Sbjct: 266 LNDESKGYLVEDSIVLETTLL 286
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 78 FVVGGYKWRVLIFPKG----NNVDYLSMYLDVAD-SASLPYGWSRYAQFSLAVVNQIQNK 132
F VGG+KWR++ +P G D++S+Y + + AS+ A+ + N +
Sbjct: 34 FDVGGHKWRLIFYPAGKLEEGGKDHVSIYARIENVGASMQID----AELKFFIYNHNNKQ 89
Query: 133 YTVRKD-TQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLLIEAEVLV 182
Y+V +D T +N + + GF + + DP GY+ + ++ E+ V
Sbjct: 90 YSVFQDGTMKHYNKEKKECGFAQMLLFSKFNDPKNGYIDGNACIVGVEIFV 140
>AT4G09770.1 | Symbols: | TRAF-like family protein |
chr4:6154534-6155859 REVERSE LENGTH=297
Length = 297
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 78/141 (55%), Gaps = 4/141 (2%)
Query: 44 VESQPVAEPPPTSRFTWRIDNFTRLNTKKLY-SEIFVVGGYKWRVLIFPKGN-NVDYLSM 101
VE + PP ++FTW+I +F+ + K+ Y S+ FVVG KWR+ I PKG+ V LS+
Sbjct: 147 VERVVFTQNPPENKFTWKISHFSYIGDKRYYYSDEFVVGDRKWRLKISPKGDKKVRALSV 206
Query: 102 YLDVADSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDW-GFTSFMPLGE 160
Y+ S YA+ L ++NQ +N + K H ++ D G + + + +
Sbjct: 207 YVQAMAYLPNAVASSTYAKLRLRLLNQ-KNSNHIEKRVFHFYSRENGDGSGISELISVED 265
Query: 161 LYDPSRGYLVNDTLLIEAEVL 181
L D S+GYLV D++++E +L
Sbjct: 266 LNDESKGYLVEDSIVLETTLL 286
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 78 FVVGGYKWRVLIFPKG----NNVDYLSMYLDVAD-SASLPYGWSRYAQFSLAVVNQIQNK 132
F VGG+KWR++ +P G D++S+Y + + AS+ A+ + N +
Sbjct: 34 FDVGGHKWRLIFYPAGKLEEGGKDHVSIYARIENVGASMQID----AELKFFIYNHNNKQ 89
Query: 133 YTVRKD-TQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLLIEAEVLV 182
Y+V +D T +N + + GF + + DP GY+ + ++ E+ V
Sbjct: 90 YSVFQDGTMKHYNKEKKECGFAQMLLFSKFNDPKNGYIDGNACIVGVEIFV 140
>AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific protease 4
| chr2:9476733-9478825 REVERSE LENGTH=365
Length = 365
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 111/268 (41%), Gaps = 38/268 (14%)
Query: 199 YVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKL--QY 256
Y G +N G TCY NS+LQ LY FR+ + ++ L LF ++ Q
Sbjct: 22 YFGFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKADAEENLLTCLADLFSQISSQK 81
Query: 257 SDTSVAT-----------KELTKSFGWDTYDSFMQHDVQELNRVL--------------- 290
T V EL +S+ F+ + + EL +L
Sbjct: 82 KKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEILEKETQATKADNETSS 141
Query: 291 -CEKLEDKMKGTVVEGT--------IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDV 341
EK+ + +K + G + K+F+G N C+ + + R E+F DL LD+
Sbjct: 142 SPEKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNETRCLRCETVTARDETFLDLSLDI 201
Query: 342 KGCRDVYASFDKYVEVERLEGDNKYHAEQ-YGLQDAKKGVLFIDFPPVLQLQLKRFEYDF 400
+ + + + E L ++K+ ++ LQ+A+K + P +L + LKRF+Y
Sbjct: 202 EQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYME 261
Query: 401 MRDTMVKINDRYEFPSELDLDREDGKYL 428
K++ R FP EL L +Y+
Sbjct: 262 QLGRYKKLSYRVVFPLELKLSNTVDEYV 289
>AT3G58400.1 | Symbols: | TRAF-like family protein |
chr3:21602667-21604063 REVERSE LENGTH=316
Length = 316
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 94 NNVDYLSMYLDVADSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFT 153
N + YLS+YL+VAD+ SLP+GW R+A+++L +VNQ K + Q F+ WG
Sbjct: 64 NFIGYLSLYLEVADNGSLPFGWRRHARYTLTLVNQNSKKSFQPNEVQEWFD-DSIKWGCP 122
Query: 154 SFMPLGELYDPSRGYLVNDTLLIEAEVLVRRIV 186
S PL E++ G+LVN L I AE+ + ++
Sbjct: 123 SMFPLNEIHAKDSGFLVNGELKIVAEIDILEVI 155
>AT2G42480.1 | Symbols: | TRAF-like family protein |
chr2:17685805-17689851 REVERSE LENGTH=743
Length = 743
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 69/126 (54%), Gaps = 9/126 (7%)
Query: 58 FTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGN--NVDYLSMYLDVADSASLPYGW 115
F + IDNF+ + S+ FV GG +W + ++PKG N D++S+YL VA+S SL GW
Sbjct: 8 FRFEIDNFSE-KKDVIASKAFVSGGCEWFLYLYPKGQSLNDDHMSLYLSVANSKSLGSGW 66
Query: 116 SRYAQFSLAVVNQIQNKYTVRKDTQHQ---FNARESDWGFTSFMPLGELYDPSRGYLVND 172
R A+F +V+N+ +K R + F + WG +PL + + +G+L D
Sbjct: 67 KRSAKFYFSVLNE-SDKELYRSTISQEFCLFCVQALAWGIRKALPLSKFEE--KGFLEKD 123
Query: 173 TLLIEA 178
L++E
Sbjct: 124 KLIVEV 129
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 51 EPPPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFP-KGNNVDYLSMYLDVADSA 109
E + FT+ I+NF+ ++S IF+ G W V ++P K NN D++S+YL VA+
Sbjct: 386 ENHQKTSFTFEIENFSE-RKYLIWSPIFISGQCHWFVKVYPIKDNNYDHVSVYLHVANPQ 444
Query: 110 SLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYL 169
SL GW R A FSL + NQ + + D+ F E + +P +L + G+L
Sbjct: 445 SLRPGWKRRAHFSLILSNQSGKEVKIPSDSCDLF-CTELSSSYPKILPPIKLKEE--GFL 501
Query: 170 VNDTLLI 176
ND L+I
Sbjct: 502 ENDKLII 508
>AT5G26260.1 | Symbols: | TRAF-like family protein |
chr5:9200492-9202153 FORWARD LENGTH=351
Length = 351
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
Query: 75 SEIFVVGGYKWRVLIF----PKGNNVDYLSMYLDVADSASLPYGWSRYAQFSLAVVNQIQ 130
S IF GYKWR++++ PKG +++S+Y + ++ +LP GW L V N+
Sbjct: 82 SSIFEAAGYKWRLVLYVKGNPKGGINNHISLYARIEETETLPRGWEVNVDLKLFVHNRKL 141
Query: 131 NKY-TVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLLIEAEVLV 182
KY +V T ++N + +WGFT + L Y+ + GYLV DT AE+ +
Sbjct: 142 KKYLSVTDGTVKRYNDAKKEWGFTQLISLPTFYNANEGYLVQDTASFGAEIFI 194
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 21/141 (14%)
Query: 53 PPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSASLP 112
PP + FTW+I F+ L K YS+ F+VG WR+ PKG+ +LP
Sbjct: 210 PPDNVFTWKILRFSTLEDKFYYSDDFLVGDRYWRLGFNPKGSG---------GGRPHALP 260
Query: 113 YGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARE---SDW---------GFTSFMPLGE 160
+ AVV +R Q N ++ + W G + + + E
Sbjct: 261 IFLYAQGHKANAVVTNTWGAVNLRLKNQRSSNHKQLYSAAWYPIRSDYGVGVNNIILMSE 320
Query: 161 LYDPSRGYLVNDTLLIEAEVL 181
L D S+GY+VND ++ EAE++
Sbjct: 321 LKDASKGYMVNDAIIFEAEMV 341
>AT5G26320.1 | Symbols: | TRAF-like family protein |
chr5:9238310-9241236 FORWARD LENGTH=352
Length = 352
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 77/146 (52%), Gaps = 10/146 (6%)
Query: 46 SQPVAEPPPTSRFTWRIDNFTRLN--TKKLYSEIFVVGGYKWRVLIFPKGNNVD------ 97
++ + E P+S+ I +F+ + ++ S F GYKWR ++F GN D
Sbjct: 51 TRVLREERPSSKIV-TITSFSVIKGRSEAFESSTFEAAGYKWRFMLFVNGNQNDPDGGHE 109
Query: 98 YLSMYLDVADSASLPYGWSRYAQFSLAVVNQIQNKY-TVRKDTQHQFNARESDWGFTSFM 156
+++Y+ + ++ S P GW L V N+ +KY TV T ++ A ++ WGF + +
Sbjct: 110 NMALYVGIKETESFPRGWEVNVDLKLFVHNEKLHKYLTVSDGTVKRYEAAKTYWGFGNLI 169
Query: 157 PLGELYDPSRGYLVNDTLLIEAEVLV 182
P L DP+ GY+++DTL AE+ +
Sbjct: 170 PRTTLLDPNEGYILHDTLSFGAEISI 195
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 15/177 (8%)
Query: 18 LVPHADLPENN-----HQPMDVVAQPETANAVESQ---PVAEPPPTSRFTWRIDNFTRLN 69
L+P L + N H + A+ N E Q PP + FTW+I F+ L
Sbjct: 168 LIPRTTLLDPNEGYILHDTLSFGAEISIVNPAEKQEKITFISNPPDNVFTWKILRFSTLE 227
Query: 70 TKKLYSEIFVVGGYKWRVLIFPKGNNVD---YLSMYLDVADSASLPYGWSRYAQFSLAVV 126
K YS+ F+VG WR+ PKG + LS++L + + + +L +
Sbjct: 228 NKFYYSDEFLVGDRYWRLGFNPKGYQGERPRALSIFLYAQGYKANAVITNTWGSVNLQLK 287
Query: 127 NQIQNKYTVRKDTQHQFNARESDWGF--TSFMPLGELYDPSRGYLVNDTLLIEAEVL 181
NQ + + + + A S +G S + L +L + S+GYLVND ++ EAE++
Sbjct: 288 NQRSSNHI--QLYSEAWCAIRSGYGIEGNSIILLEDLQNSSKGYLVNDAIIFEAELV 342
>AT3G58380.1 | Symbols: | TRAF-like family protein |
chr3:21597965-21599195 REVERSE LENGTH=307
Length = 307
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Query: 57 RFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSA-SLPYGW 115
+F W I + K+ +S+ F++ G +WR+L PKG N ++ Y+ VADS SL W
Sbjct: 8 KFVWVIKDLNVFYPKQSHSDPFLIAGSRWRLLALPKGTNYEFFYQYMGVADSCQSLTSSW 67
Query: 116 SRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLL 175
R+ + L +VN I +K ++ D+ F+ + + P L G+L+ +
Sbjct: 68 RRHVKLRLTIVNGISHKRSIVTDSDLYFDENLPACSYPTVPPPFNLLARDAGFLICREIT 127
Query: 176 IEAEVLVRRIVDYWNYDS 193
I EV+ ++ N D
Sbjct: 128 IVIEVVSLEVIGTSNNDG 145
>AT3G20360.1 | Symbols: | TRAF-like family protein |
chr3:7099952-7101589 REVERSE LENGTH=363
Length = 363
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 11/157 (7%)
Query: 32 MDVVAQPETANAVESQPVAEPPPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFP 91
+DV+ P + E V + P+ RFTW I ++ L T L SE F++GG W + IF
Sbjct: 199 VDVIIPPFYEKS-EVFSVTKSFPSPRFTWYIQGYSTLPTDYL-SEEFIIGGKSWNLRIFK 256
Query: 92 KGNNV---DYLSMYLDVADSASL---PYGWSRYAQFSLAVVNQI--QNKYTVRKDTQHQF 143
G LS+YL++ L PY Y + L V NQ Q+ + + + F
Sbjct: 257 NGFGAFEGKNLSLYLNLGPQELLKAKPYD-KVYVRAKLRVPNQFGSQSNLVLERPLDNWF 315
Query: 144 NARESDWGFTSFMPLGELYDPSRGYLVNDTLLIEAEV 180
+ + WG+ FMPL +L + S+G+LVND L+++ +
Sbjct: 316 SPQTIGWGYADFMPLSDLRNSSKGFLVNDMLVVQVAM 352
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 12/129 (9%)
Query: 51 EPPPTSRFTWRIDNFTRLNTKKLYSE-----IFVVGGYKWRVLIFPKGNNVD----YLSM 101
E PP+S ++ ++++F L K +Y+E F VG Y W ++++PKGN D ++S+
Sbjct: 63 ERPPSS-YSLKMESFNTL-MKSVYTERYESRPFRVGRYNWTLVVYPKGNKNDNGTGHISL 120
Query: 102 YLDVADSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQ-HQFNARESDWGFTSFMPLGE 160
Y+ + +S + V N+ + KY +DT +F+A + WGF+ +PL
Sbjct: 121 YVVLDNSTLTSQSEEVHVDLRFYVFNKKETKYFTIQDTDVWRFSAIKRMWGFSKVLPLIT 180
Query: 161 LYDPSRGYL 169
+ GYL
Sbjct: 181 FNNLKNGYL 189
>AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific protease 3
| chr4:18511858-18514139 REVERSE LENGTH=371
Length = 371
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 112/266 (42%), Gaps = 43/266 (16%)
Query: 199 YVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSG--SIPLALQSLFYKL-- 254
Y G +N G TCY NS+LQ LY FR+ + T+ + ++ L LF ++
Sbjct: 22 YFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKSVADAEENLMTCLADLFSQISS 81
Query: 255 QYSDTSV-ATKELTKSFGW--DTYDSFMQHDVQE-LNRVLCEK---LEDKMKGTVVE--- 304
Q T V A K + + + S+M D E LN +L E LE + K T E
Sbjct: 82 QKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNEVVDILEKEAKATKTEHET 141
Query: 305 -------------------GTIQK---------LFEGHHMNYIECINVDYKSTRKESFYD 336
G + K +F+G N C+ + + R E+F D
Sbjct: 142 SSSSSPEKIANGLKVPQANGVVHKEPIVTWVHNIFQGILTNETRCLRCETVTARDETFLD 201
Query: 337 LQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQ-YGLQDAKKGVLFIDFPPVLQLQLKR 395
L LD++ + + + E L ++K+ ++ LQ+A+K + P +L + LKR
Sbjct: 202 LSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 261
Query: 396 FEYDFMRDTMVKINDRYEFPSELDLD 421
F+Y K++ R FP EL L
Sbjct: 262 FKYIEQLGRYKKLSYRVVFPLELKLS 287
>AT2G05410.1 | Symbols: | TRAF-like family protein |
chr2:1977490-1978553 FORWARD LENGTH=265
Length = 265
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 88 LIFPKGNNV--DYLSMYLDVADSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNA 145
+ +PKG N D S++L+V D+ SLP GW R+A+ S ++VNQ K + RK TQH F
Sbjct: 1 MAYPKGINKAHDSFSLFLNVPDNESLPTGWRRHAKVSFSLVNQGSEKLSQRKVTQHWFVQ 60
Query: 146 RESDWGFTSFMPLGELYDPSRGYLVNDTLLIEAEVLVRRIVDYWNYDSKKETG 198
+ WGF + EL + G+LVN L + A++ V +V D KE+
Sbjct: 61 KAFTWGFPVMITHTEL-NAKMGFLVNGELKVVAKIEVLEVVG--KLDVSKESS 110
>AT4G01390.1 | Symbols: | TRAF-like family protein |
chr4:570242-571595 REVERSE LENGTH=300
Length = 300
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Query: 36 AQPETANAVESQPVAEPPPTSRFTWRIDNFTRLNTKKLY-SEIFVVGGYKWRVLIFPKGN 94
A+P TA ES + E P R TW + F+ N ++ S FVVG KWR+ + P+G+
Sbjct: 149 AKPGTA---ESFSLIEKPLNHRVTWMMTMFSSFNPGNVHQSNEFVVGTRKWRIKVHPRGS 205
Query: 95 NVD---YLSMYLDVADSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESD-W 150
+ S+YL + YA+F L V++Q+ + V K A D
Sbjct: 206 MGEKDKSFSVYLSALGFVNNAPKTKTYARFKLRVLDQVSRNH-VEKTISGWLGAEPDDRH 264
Query: 151 GFTSFMPLGELYDPSRGYLVNDTLLIEAEVLVRRIVDY 188
GF FMPLGEL DP YLV D L + + V + +Y
Sbjct: 265 GFADFMPLGELDDP---YLVKDKLYVGVDFDVISVSNY 299
>AT5G26280.1 | Symbols: | TRAF-like family protein |
chr5:9208724-9210403 FORWARD LENGTH=350
Length = 350
Score = 70.9 bits (172), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 75 SEIFVVGGYKWRVLIFPKGNNVD----YLSMYLDVADSASLPYGWSRYAQFSLAVVNQIQ 130
S +F GYKWR++++ GN D ++S+Y + ++ SLP GW L V N
Sbjct: 81 SSVFEAAGYKWRLVLYVNGNKNDGGNDHISLYARIEETNSLPLGWEVNVDLKLFVHNGKL 140
Query: 131 NKY-TVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLLIEAEVLV 182
+KY TV ++N + +WGF +P Y+ + GYL DT AE+ +
Sbjct: 141 HKYLTVTDGLVKRYNNAKKEWGFGQLIPRSTFYNANEGYLDQDTGSFGAEIFI 193
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 21/141 (14%)
Query: 53 PPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSASLP 112
PP + FTW+I F+ L K YS+ F+V WR+ PKG+ +LP
Sbjct: 209 PPNNVFTWKILRFSTLEDKFYYSDDFLVEDRYWRLGFNPKGDG---------GGRPHALP 259
Query: 113 YGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARE---SDW---------GFTSFMPLGE 160
+ AV +R Q N R+ + W G + + L +
Sbjct: 260 IFLFAQGHKANAVATNTWGAVNLRLKNQRSTNHRQIYSAAWYPIGSGYGVGVNNIILLAD 319
Query: 161 LYDPSRGYLVNDTLLIEAEVL 181
L D S+GYLVND ++ EAE++
Sbjct: 320 LNDASKGYLVNDAIIFEAEMV 340
>AT3G28220.1 | Symbols: | TRAF-like family protein |
chr3:10524420-10526497 FORWARD LENGTH=370
Length = 370
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 58 FTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNN---VDYLSMYLDVADSASLPYG 114
+ W + NF+ L + S+ FV+GG W + ++P G+ + LS+Y+ D PY
Sbjct: 239 YKWTLPNFSSLEKQYYVSDKFVIGGRSWALKVYPSGDGEGQGNSLSLYVVAVDVK--PYD 296
Query: 115 WSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTL 174
Y + L ++NQ +K+ +K ++ + + WGF F+P +L D S+G LVNDTL
Sbjct: 297 -KIYLKAKLRIINQRDSKHMEKK--VESWSDQANSWGFQKFVPFADLKDTSKGLLVNDTL 353
Query: 175 LIEAE 179
+E E
Sbjct: 354 KMEIE 358
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 77/147 (52%), Gaps = 11/147 (7%)
Query: 54 PTSRFTWRIDNFTRL----NTKKLYSEIFVVGGYKWRVLIFPKGN-----NVDYLSMYLD 104
P S + +I++F + N +K S F GGY W ++++PKGN ++Y+SMY+
Sbjct: 79 PPSTYCLKIESFIKFATSPNAEKYESRPFESGGYNWTLIVYPKGNIKEGAPLNYVSMYVQ 138
Query: 105 VADSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDT-QHQFNARESDWGFTSFMPLGELYD 163
+ +S L YA+ + N+ ++KY ++T +F + WG+ + P ++ +
Sbjct: 139 IDNSTLLNSPKEVYAEVKFFIYNRKEDKYLTYQETDAKRFFLFKPYWGYGNVRPYTDVAN 198
Query: 164 PSRGYLVN-DTLLIEAEVLVRRIVDYW 189
P+ G+L + D +L +V V + + W
Sbjct: 199 PNAGWLFDGDNVLFGVDVFVTEVFNKW 225
>AT1G58270.1 | Symbols: ZW9 | TRAF-like family protein |
chr1:21612394-21614089 REVERSE LENGTH=396
Length = 396
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 9/140 (6%)
Query: 58 FTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKG---NNVDYLSMYLDVADSASLPYG 114
F WR+ F+ S+ F GG W + ++P G + LS+YL ++D ++
Sbjct: 254 FEWRLTKFSTRFLDSYTSDSFSSGGRNWALKVYPNGVGNATGNSLSLYL-LSDQSND--- 309
Query: 115 WSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTL 174
Y + L V++QIQ+ K NA E+ WGF F+ ++ + S+G+LVNDTL
Sbjct: 310 -KGYVEAKLRVIDQIQSN-NFEKKVAAWPNATENGWGFDRFLSFADIKNTSKGFLVNDTL 367
Query: 175 LIEAEVLVRRIVDYWNYDSK 194
+E ++L DY+++ S
Sbjct: 368 KLEVQILSFSKTDYYSHQSS 387
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 18/184 (9%)
Query: 22 ADLPENNHQPMDVVAQP----ETANAVESQPVAEPPPTSRFTWRIDNFTRL------NTK 71
+LP + +P + + + AV + PP + + + +F + N
Sbjct: 59 GNLPCGSSKPSSASVRAHDEQKLSQAVTTDTRTRPP--NSYCVKFQSFVTMAKQVKENGG 116
Query: 72 KLYSEIFVVGGYKWRVLIFP----KGNNVDYLSMYLDVADSASLPYGWSRYAQFSLAVVN 127
K S F VGGY W +LI+P ++ Y+S+Y+ V +S+ + YA+ +
Sbjct: 117 KYESRPFSVGGYNWTLLIYPVIYIPTDSGGYVSIYVRVDNSSLITNPKDVYAEITFLAYK 176
Query: 128 QIQNKYTVRKDTQHQ-FNARESDWGFTSFMPLGELYDPSRGYLV-NDTLLIEAEVLVRRI 185
+KY + ++T+ Q F+ + WG F+P+ +P+ GY ++++ ++ + +
Sbjct: 177 SSTDKYQISQETEAQRFHLFKQQWGLLQFLPIYYFENPAYGYFFEGESVVFGVDINIVKP 236
Query: 186 VDYW 189
+ W
Sbjct: 237 FENW 240
>AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 |
chr5:26157863-26161096 FORWARD LENGTH=731
Length = 731
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 124/303 (40%), Gaps = 46/303 (15%)
Query: 201 GLKNQGATCYMNSLLQTLYH----IPYFRKAVYHMPTTEND-------------MPSGSI 243
GL N G +CY N++LQ L I Y + ++ + G
Sbjct: 330 GLVNLGNSCYANAVLQCLAFTRPLISYLIRGLHSKTCRKKSWCFVCEFEHLILKARGGES 389
Query: 244 PLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV 303
PL+ + KLQ K L D ++ F++ V + V + E G
Sbjct: 390 PLSPIKILSKLQK-----IGKHLGPGKEEDAHE-FLRCAVDTMQSVFLK--EAPAAGPFA 441
Query: 304 EGT--IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKG----CRDVYASFDKYVEV 357
E T + F G+ + I+C+ +KS R E DL +++ G + A F Y
Sbjct: 442 EETTLVGLTFGGYLHSKIKCMACLHKSERPELMMDLTVEIDGDIGSLEEALAQFTAY--- 498
Query: 358 ERLEGDNKYHAEQY-GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPS 416
E L+G+N+Y + Q AKK ++ ++ P +L + LKRF+ D K++ FP
Sbjct: 499 EVLDGENRYFCGRCKSYQKAKKKLMILEGPNILTVVLKRFQ----SDNFGKLSKPIHFPE 554
Query: 417 ELDLDREDGKYLS-PD-ADRSVRNLYTXXXXXXXXXXXXXXXYYAFIRPTLSEQWYKFDD 474
LD+ Y+S P+ D V +LY Y +I+ TL W+K DD
Sbjct: 555 LLDIS----PYMSDPNHGDHPVYSLYAVVVHLDAMSTLFSGHYVCYIK-TLDGDWFKIDD 609
Query: 475 ERV 477
V
Sbjct: 610 SNV 612
>AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 |
chr4:12679493-12684528 REVERSE LENGTH=1008
Length = 1008
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 126/310 (40%), Gaps = 39/310 (12%)
Query: 200 VGLKNQGATCYMNSLLQTLYHIP----YFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQ 255
GL N G +C+ N + Q L P YF + + T+ + + L K +
Sbjct: 542 CGLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSRACTKKEQ---CFTCGFEKLVVKAK 598
Query: 256 YSDTSVATKELT---KSFGW--------DTYDSFMQHDVQELNRVLCEKLE-DKMKGTVV 303
+ ++ L ++ G D ++ F++ V + V + E D K + +
Sbjct: 599 EEKSPLSPNGLLSQLQNIGIFLGNGKEEDAHE-FLRFVVDTMQSVCIKASEYDMTKSSKL 657
Query: 304 EGT--IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYA---SFDKYVEVE 358
E T I F G+ + I+C+ KS +E DL +++ G D+ + ++ E
Sbjct: 658 EDTTLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEIDG--DISTLDDALRRFTRTE 715
Query: 359 RLEGDNKYHAEQY-GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPSE 417
L+G+NKY + AKK + + P VL + LKRF+ K+N FP
Sbjct: 716 ILDGENKYRCGSCKSYERAKKKLKITEPPNVLTIALKRFQAG----KFGKLNKLIRFPET 771
Query: 418 LDLDREDGKYLSPDADRSVR-NLYTXXXXXXXXXXXXXXXYYAFIRPTLSEQWYKFDDER 476
LDL Y+S +++S LY Y +IR +WYK DD
Sbjct: 772 LDL----APYVSGGSEKSHDYKLYGVIVHLDVMNAAFSGHYVCYIRN--QNKWYKADDST 825
Query: 477 VTKEDNKRAL 486
V D +R L
Sbjct: 826 VVTSDVERIL 835
>AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 |
chr2:9476733-9478825 REVERSE LENGTH=379
Length = 379
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 111/282 (39%), Gaps = 52/282 (18%)
Query: 199 YVGLKNQGATCYMNSLLQ--------------TLYHIPYFRKAVYHMPTTENDMPSGSIP 244
Y G +N G TCY NS+LQ LY FR+ + ++
Sbjct: 22 YFGFENFGNTCYCNSVLQDWVVDLRSVLHSMFALYFCAPFREQLLEHYANNKADAEENLL 81
Query: 245 LALQSLFYKL--QYSDTSVAT-----------KELTKSFGWDTYDSFMQHDVQELNRVL- 290
L LF ++ Q T V EL +S+ F+ + + EL +L
Sbjct: 82 TCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEILE 141
Query: 291 ---------------CEKLEDKMKGTVVEGT--------IQKLFEGHHMNYIECINVDYK 327
EK+ + +K + G + K+F+G N C+ +
Sbjct: 142 KETQATKADNETSSSPEKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNETRCLRCETV 201
Query: 328 STRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQ-YGLQDAKKGVLFIDFP 386
+ R E+F DL LD++ + + + E L ++K+ ++ LQ+A+K + P
Sbjct: 202 TARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPP 261
Query: 387 PVLQLQLKRFEYDFMRDTMVKINDRYEFPSELDLDREDGKYL 428
+L + LKRF+Y K++ R FP EL L +Y+
Sbjct: 262 HILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSNTVDEYV 303
>AT3G20370.1 | Symbols: | TRAF-like family protein |
chr3:7105481-7107079 FORWARD LENGTH=379
Length = 379
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 79/140 (56%), Gaps = 14/140 (10%)
Query: 39 ETANAVESQPVAEPPPTSRFTWRIDNFTRL----NTKKLYSEIFVVGGYKWRVLIFPKGN 94
+NAV+ + + PP+S ++ ++++F L T+K S F VGGY W +++FP GN
Sbjct: 72 SASNAVKG--LRDRPPSS-YSLKMESFNTLLKSTYTEKYVSRPFSVGGYNWTLVVFPNGN 128
Query: 95 NVD----YLSMYLDVADSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQ-HQFNARESD 149
D YLS+Y+ + D+++L YA + N+ + KY +DT +F+ ++
Sbjct: 129 KKDSGSGYLSLYVAI-DNSTLGQQ-EIYADLRFYIFNKNERKYFTIQDTDVWKFSVFKTM 186
Query: 150 WGFTSFMPLGELYDPSRGYL 169
WGF+ +P+ DP++GYL
Sbjct: 187 WGFSQVLPIDTFKDPTKGYL 206
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 68/153 (44%), Gaps = 9/153 (5%)
Query: 35 VAQPETANAVESQPVAEPPPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGN 94
V P E V E RFTW I F+ L SE+F +GG W + I P G
Sbjct: 218 VTMPSLYEKSELFSVTENFLNPRFTWTIRGFSTLLKNSYLSEVFSIGGRSWNIQINPSGL 277
Query: 95 NVD---YLSMYLDV-ADSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNA---RE 147
LSMYL + + PY Y + L +NQ+ N + ++ +N E
Sbjct: 278 GTGEGKALSMYLGLNVNEIFRPYE-KIYVRAKLRALNQL-NLSNIERELDIWYNGPGYGE 335
Query: 148 SDWGFTSFMPLGELYDPSRGYLVNDTLLIEAEV 180
WGF F+ L D S+G++ ND L+++ E+
Sbjct: 336 YSWGFPEFIYFPYLTDSSKGFVKNDVLMVQVEM 368
>AT3G58430.1 | Symbols: | TRAF-like family protein |
chr3:21613163-21616174 REVERSE LENGTH=535
Length = 535
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 57 RFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSASLPYGWS 116
+F W I NF+ +++LYS ++G KWR + +P + Y S+ L V D SLP GW
Sbjct: 8 KFCWIIKNFSP-QSERLYSVPVLIGDCKWRPIAYPIRDK--YFSLCLQVVDFESLPCGWG 64
Query: 117 RYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGF 152
RY + L + NQ N + H F+ + + WG
Sbjct: 65 RYVELRLTLRNQ-HNSLNLSIKADHCFDEKRTTWGI 99
>AT3G58290.3 | Symbols: | TRAF-like superfamily protein |
chr3:21580572-21581861 REVERSE LENGTH=264
Length = 264
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 53 PPTSRFTWRIDNFTRLNTKKLY-SEIFVVGGYKWRVLIFPKG----------NNVDYLSM 101
P +F W I NF+ L + Y S+ ++ WR+ +P+G NN D+LS+
Sbjct: 7 PCDKKFVWVIKNFSSLQLQDCYVSDPVLIHDVNWRLFAYPEGSNGDHLLFKKNNGDHLSL 66
Query: 102 YLDVADSASLPYGWSRYAQFSLAVVNQIQNKYTVRK 137
YL+V D SLP GW +Y QF VVNQI +V++
Sbjct: 67 YLEV-DFESLPCGWRQYTQFRFTVVNQISEHSSVKR 101
>AT2G04170.5 | Symbols: | TRAF-like family protein |
chr2:1417660-1419156 REVERSE LENGTH=369
Length = 369
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 75 SEIFVVGGYKWRVLIF----PKGNNVDYLSMYLDVADSASLPYGWSRYAQFSLAVVNQIQ 130
S +F GGYKWR++++ +++S+Y+ + ++ SLP GW + L V N Q
Sbjct: 151 SSVFEAGGYKWRLVLYVNGNQNDGGNNHISLYVRIEETESLPKGWEVNVELKLFVYNGKQ 210
Query: 131 NKYTVRKD-TQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLLIEAEVL 181
KY + KD ++N + +WG+ +PL D + GYL D AE+
Sbjct: 211 RKYLIVKDGIVKRYNDAKKEWGYGKLIPLTTFLDTNEGYLEQDIASFGAEIF 262
>AT2G04170.4 | Symbols: | TRAF-like family protein |
chr2:1417404-1418711 REVERSE LENGTH=298
Length = 298
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 75 SEIFVVGGYKWRVLIF----PKGNNVDYLSMYLDVADSASLPYGWSRYAQFSLAVVNQIQ 130
S +F GGYKWR++++ +++S+Y+ + ++ SLP GW + L V N Q
Sbjct: 29 SSVFEAGGYKWRLVLYVNGNQNDGGNNHISLYVRIEETESLPKGWEVNVELKLFVYNGKQ 88
Query: 131 NKYTVRKD-TQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLLIEAEVL 181
KY + KD ++N + +WG+ +PL D + GYL D AE+
Sbjct: 89 RKYLIVKDGIVKRYNDAKKEWGYGKLIPLTTFLDTNEGYLEQDIASFGAEIF 140
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 3/132 (2%)
Query: 53 PPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNN---VDYLSMYLDVADSA 109
PP + FTW+I +F+ L K YS+ F+V WR+ PKG + ++L
Sbjct: 157 PPNNVFTWKILHFSNLEDKFYYSDDFLVEDRYWRLGFNPKGTGDGRSQAIPIFLYAQGHK 216
Query: 110 SLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYL 169
+ + +L + NQ + + + G + + L E D S+GY
Sbjct: 217 PNAVATNTWGAVNLRLKNQRSSNHAQIYSAAWYPTRSDYGVGVNTIISLAEFNDASKGYS 276
Query: 170 VNDTLLIEAEVL 181
VND+++ EAE++
Sbjct: 277 VNDSIIFEAEMV 288
>AT2G04170.3 | Symbols: | TRAF-like family protein |
chr2:1417404-1418711 REVERSE LENGTH=298
Length = 298
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 75 SEIFVVGGYKWRVLIF----PKGNNVDYLSMYLDVADSASLPYGWSRYAQFSLAVVNQIQ 130
S +F GGYKWR++++ +++S+Y+ + ++ SLP GW + L V N Q
Sbjct: 29 SSVFEAGGYKWRLVLYVNGNQNDGGNNHISLYVRIEETESLPKGWEVNVELKLFVYNGKQ 88
Query: 131 NKYTVRKD-TQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLLIEAEVL 181
KY + KD ++N + +WG+ +PL D + GYL D AE+
Sbjct: 89 RKYLIVKDGIVKRYNDAKKEWGYGKLIPLTTFLDTNEGYLEQDIASFGAEIF 140
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 3/132 (2%)
Query: 53 PPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNN---VDYLSMYLDVADSA 109
PP + FTW+I +F+ L K YS+ F+V WR+ PKG + ++L
Sbjct: 157 PPNNVFTWKILHFSNLEDKFYYSDDFLVEDRYWRLGFNPKGTGDGRSQAIPIFLYAQGHK 216
Query: 110 SLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYL 169
+ + +L + NQ + + + G + + L E D S+GY
Sbjct: 217 PNAVATNTWGAVNLRLKNQRSSNHAQIYSAAWYPTRSDYGVGVNTIISLAEFNDASKGYS 276
Query: 170 VNDTLLIEAEVL 181
VND+++ EAE++
Sbjct: 277 VNDSIIFEAEMV 288
>AT2G04170.2 | Symbols: | TRAF-like family protein |
chr2:1417404-1419156 REVERSE LENGTH=420
Length = 420
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 75 SEIFVVGGYKWRVLIF----PKGNNVDYLSMYLDVADSASLPYGWSRYAQFSLAVVNQIQ 130
S +F GGYKWR++++ +++S+Y+ + ++ SLP GW + L V N Q
Sbjct: 151 SSVFEAGGYKWRLVLYVNGNQNDGGNNHISLYVRIEETESLPKGWEVNVELKLFVYNGKQ 210
Query: 131 NKYTVRKD-TQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLLIEAEVL 181
KY + KD ++N + +WG+ +PL D + GYL D AE+
Sbjct: 211 RKYLIVKDGIVKRYNDAKKEWGYGKLIPLTTFLDTNEGYLEQDIASFGAEIF 262
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 3/132 (2%)
Query: 53 PPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNN---VDYLSMYLDVADSA 109
PP + FTW+I +F+ L K YS+ F+V WR+ PKG + ++L
Sbjct: 279 PPNNVFTWKILHFSNLEDKFYYSDDFLVEDRYWRLGFNPKGTGDGRSQAIPIFLYAQGHK 338
Query: 110 SLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYL 169
+ + +L + NQ + + + G + + L E D S+GY
Sbjct: 339 PNAVATNTWGAVNLRLKNQRSSNHAQIYSAAWYPTRSDYGVGVNTIISLAEFNDASKGYS 398
Query: 170 VNDTLLIEAEVL 181
VND+++ EAE++
Sbjct: 399 VNDSIIFEAEMV 410
>AT2G04170.1 | Symbols: | TRAF-like family protein |
chr2:1417404-1419156 REVERSE LENGTH=420
Length = 420
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 75 SEIFVVGGYKWRVLIF----PKGNNVDYLSMYLDVADSASLPYGWSRYAQFSLAVVNQIQ 130
S +F GGYKWR++++ +++S+Y+ + ++ SLP GW + L V N Q
Sbjct: 151 SSVFEAGGYKWRLVLYVNGNQNDGGNNHISLYVRIEETESLPKGWEVNVELKLFVYNGKQ 210
Query: 131 NKYTVRKD-TQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLLIEAEVL 181
KY + KD ++N + +WG+ +PL D + GYL D AE+
Sbjct: 211 RKYLIVKDGIVKRYNDAKKEWGYGKLIPLTTFLDTNEGYLEQDIASFGAEIF 262
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 3/132 (2%)
Query: 53 PPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNN---VDYLSMYLDVADSA 109
PP + FTW+I +F+ L K YS+ F+V WR+ PKG + ++L
Sbjct: 279 PPNNVFTWKILHFSNLEDKFYYSDDFLVEDRYWRLGFNPKGTGDGRSQAIPIFLYAQGHK 338
Query: 110 SLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYL 169
+ + +L + NQ + + + G + + L E D S+GY
Sbjct: 339 PNAVATNTWGAVNLRLKNQRSSNHAQIYSAAWYPTRSDYGVGVNTIISLAEFNDASKGYS 398
Query: 170 VNDTLLIEAEVL 181
VND+++ EAE++
Sbjct: 399 VNDSIIFEAEMV 410
>AT4G00780.1 | Symbols: | TRAF-like family protein |
chr4:334779-336120 FORWARD LENGTH=299
Length = 299
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 69/148 (46%), Gaps = 9/148 (6%)
Query: 37 QPETANAVESQPVAEPPPTSRFTWRIDNFTRLNTKKLY-SEIFVVGGYKWRVLIFPKG-- 93
+P E + E P + TW + F+ N K + S FVVG KWR+ + P+G
Sbjct: 146 EPANPGTAECFSLIEKPLNHKVTWMMSKFSSFNPGKAHQSNEFVVGTRKWRLEVHPRGYM 205
Query: 94 -NNVDYLSMYLDVADSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDW-G 151
S+YL + YA+F L V++Q+ + V + F+A SD G
Sbjct: 206 DEKDKSFSVYLSAEGFVNNAPMTKTYAKFKLRVLDQVSWNH-VEESGLSWFDAEPSDQSG 264
Query: 152 FTSFMPLGELYDPSRGYLVNDTLLIEAE 179
F FMPLG+L +P YLV D L + E
Sbjct: 265 FADFMPLGKLNEP---YLVKDKLYVGVE 289
>AT3G46190.1 | Symbols: | TRAF-like family protein |
chr3:16965889-16967345 FORWARD LENGTH=291
Length = 291
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 58 FTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSASLPYGWSR 117
FTW + NF+ L S+ F G W + ++P G+ V + S S
Sbjct: 163 FTWSLPNFSTLTLDSYTSDPFSSGDRNWVLKVYPNGDGVGKDNSLSLYLLSESNE---KN 219
Query: 118 YAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLLIE 177
Y + +L V+NQI + V K + NA E+ WG+ F+PL +L D ++G++V+D L +E
Sbjct: 220 YVRATLRVLNQIGSD-NVEKPVEGWPNAAENGWGYQEFIPLADLQDATKGFVVDDLLEVE 278
Query: 178 AEVLV 182
E++
Sbjct: 279 VEIMA 283
>AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 |
chr3:4811953-4815210 REVERSE LENGTH=661
Length = 661
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 22/223 (9%)
Query: 200 VGLKNQGATCYMNSLLQTLYHIPYF------RKAVYHMPTTENDMPSGSIPLAL--QSLF 251
+GL+N G TCY+NS+LQ L P K H T + P + + +
Sbjct: 24 LGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSHCDTYVDGERKRDCPFCIVEKRIA 83
Query: 252 YKLQYSDTSVATKELTKSFG--WDTYDSFMQHDVQELNRVL---CEKLEDKMKGTVVEGT 306
L T+ A +++ + + Q D E R + C ++K G
Sbjct: 84 RSLSVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRLKKLRYNGN 143
Query: 307 --------IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVE 358
++++F G + ++C++ +S + + D+ L++ V S K+ + E
Sbjct: 144 EPFNGNSVVKEIFGGALQSQVKCLSCGAESNKADEIMDISLEILQSSSVKESLQKFFQSE 203
Query: 359 RLEGDNKYHAEQY-GLQDAKKGVLFIDFPPVLQLQLKRFEYDF 400
L+G+NKY E L A+K + + P +L +QLKRF F
Sbjct: 204 ILDGNNKYRCESCEKLVTARKQMSILQAPNILVIQLKRFGGIF 246
>AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 |
chr5:23470218-23473997 REVERSE LENGTH=859
Length = 859
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 133/340 (39%), Gaps = 51/340 (15%)
Query: 200 VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPL-ALQSLFYKLQYSD 258
GL+N G TC++NS+LQ L + + + +G L A+Q + ++
Sbjct: 107 AGLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKYCHVAGFCALCAIQKHVRTARQAN 166
Query: 259 TSV-ATKELTKSFGWDT--YDSFMQHDVQE--LNRVLCEKLEDKMKGTVVEGT------- 306
+ A K+L + + + + Q D E +N + C G E +
Sbjct: 167 GRILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLLECMHKCSLPSGVPSESSDAYRRSL 226
Query: 307 IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLE-GDNK 365
+ K+F G + ++C + S + + F DL LD+ + + ++ VE L+ G
Sbjct: 227 VHKIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDISKADSLQRALSRFTAVELLDNGAKV 286
Query: 366 YHAEQYGLQ-DAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPSELDLDRED 424
Y E+ + AKK + P VL + LKRFE KI+ + +F S +D+
Sbjct: 287 YQCERCKQKVKAKKQLTVSKAPYVLTVHLKRFEAHRSE----KIDRKVDFTSAIDMK--- 339
Query: 425 GKYLSPDADRSVRNLYTXXXXXXXXXXXXXXXYYAFIRPTLSEQWYKFDDERVTKEDNKR 484
++S + +++ YT +YA T S WY DD RV + K
Sbjct: 340 -PFVSGPHEGNLK--YTLYGVLVHYGRSSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKT 396
Query: 485 ALEEQYGGEEELPQTNPGFNNAPFKFTKYSNAYMLVYIRE 524
++ AYML Y+R+
Sbjct: 397 VFNQK--------------------------AYMLFYVRD 410
>AT3G22080.1 | Symbols: | TRAF-like family protein |
chr3:7777818-7781718 REVERSE LENGTH=648
Length = 648
Score = 63.5 bits (153), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 87/180 (48%), Gaps = 20/180 (11%)
Query: 9 IDQQDDEEVLVPHADLPENNHQPMDVVAQPETANAVESQPVA-------EPPPTSRFTWR 61
+D + + + A + + P+ +++ + + + S + E P S ++ +
Sbjct: 301 LDNEGSLNIEIEFAVVSSTKYSPILILSSLASGSMMCSSVSSTTLRSWRERTPNS-YSLK 359
Query: 62 IDNFTRLNTKKLYSE------IFVVGGYKWRVLIFPKGNNVD----YLSMYLDVADSASL 111
+ N +++ L+S+ +F GGY WR++I+PKGN D ++SMY+++ ++ L
Sbjct: 360 LQNISQVEKSTLFSDGKYQSRLFSSGGYNWRMIIYPKGNRKDDGSGFISMYVEIDSTSLL 419
Query: 112 PYGWSR-YAQFSLAVVNQIQNK-YTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYL 169
+ +A V N+ +NK YT++ FNA + WG +P+ DP GY+
Sbjct: 420 TTPTTEVFADLRFFVFNKKENKYYTIQHVESKLFNAFRTIWGLAQVLPVDTFTDPKNGYI 479
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 9/152 (5%)
Query: 34 VVAQPETANAVESQPVAEPPPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKG 93
+VA P T + + A P +F W + NF+ LN S F + KW + ++PKG
Sbjct: 492 IVAAPPTNWEIHTLHEALSQP--KFFWTVKNFSELNNNVYTSGNFSMRERKWVLKLYPKG 549
Query: 94 N---NVDYLSMYLDVADSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDW 150
+ + +LS+YL + S +L + Q L V++ + + K + + + W
Sbjct: 550 DVKGDRKWLSLYLYLDQSETLKESEKIFVQAQLRVLDPRGSNHVTHK-ISSWYTSSNTAW 608
Query: 151 GFTSFMPLGELYDPSRGYLVNDTLLIEAEVLV 182
G+ F+ L E+ + YL DTL ++ +V V
Sbjct: 609 GYRKFVSLAEI---PKAYLDKDTLKVQIDVEV 637
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 6/65 (9%)
Query: 51 EPPPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVD----YLSMYLDVA 106
E PP+S ++ + +N L+ K S +F GGY WR++I+PKGN D ++SMY+++
Sbjct: 15 EHPPSS-YSIKFENIAELDDGKYESSLFAAGGYNWRLVIYPKGNAKDEGSGFISMYVEI- 72
Query: 107 DSASL 111
DS +L
Sbjct: 73 DSTNL 77
>AT2G15710.1 | Symbols: | TRAF-like family protein |
chr2:6842648-6845103 FORWARD LENGTH=365
Length = 365
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 11/128 (8%)
Query: 49 VAEPPPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVD----YLSMYLD 104
+ E PP+S ++ +I+ ++L K S F+ GGY WR++I+PKGN D ++SMY++
Sbjct: 93 LREHPPSS-YSLKINKLSQLTFDKYESHRFLSGGYNWRLVIYPKGNEKDKGSGFISMYVE 151
Query: 105 VAD---SASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQ-HQFNARESDWGFTSFMPLGE 160
+ S++ P +A V N+ +NKY +D + +FNA + WG + + L
Sbjct: 152 FDNTKVSSTSPM--EVFAYIIFFVYNKKENKYFTIQDVEVKRFNALRTVWGLSQVLSLET 209
Query: 161 LYDPSRGY 168
D GY
Sbjct: 210 FNDLENGY 217
>AT2G04190.1 | Symbols: | TRAF-like family protein |
chr2:1427594-1430230 REVERSE LENGTH=411
Length = 411
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 9/145 (6%)
Query: 46 SQPVAEPPPTSRFTWRIDNFTRLNTKKLYSEIFVVGGY---KWRVLIFPKGNNVD----Y 98
++ + + PP+ R I NF+ + ++ E V Y KWR++++ GN D +
Sbjct: 111 TRTLRDEPPSHRIL-TITNFSEIIGREEPYESSVFEAYFEHKWRLILYVNGNQNDGGSNH 169
Query: 99 LSMYLDVADSASLPYGWSRYAQFSLAVVNQIQNKY-TVRKDTQHQFNARESDWGFTSFMP 157
+S+YL ++ L Y S L V N Q+KY TV Q ++N + +WG+ +P
Sbjct: 170 ISLYLRSEETDHLTYDGSINFVLKLFVYNGKQDKYLTVTDGIQKRYNYKNKEWGYGKLIP 229
Query: 158 LGELYDPSRGYLVNDTLLIEAEVLV 182
L D S+GYL DT AE+ +
Sbjct: 230 LSTFLDTSQGYLEQDTASFGAEIFL 254
>AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 |
chr4:9939914-9942698 FORWARD LENGTH=695
Length = 695
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 120/316 (37%), Gaps = 52/316 (16%)
Query: 200 VGLKNQGATCYMNSLLQTLYH-IPYFRKAV---YHMPT----------------TENDMP 239
GL N G +C++NS+ Q H +P + Y +P E +
Sbjct: 176 AGLWNLGNSCFLNSVFQCFTHTVPLIESLLSFRYEVPCHCGNEFFCVIRAIRYHIEAALR 235
Query: 240 SGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLE---- 295
P+A F L Y F D + + Q D E + EKLE
Sbjct: 236 PERCPIAPYFFFDNLNY-------------FSPD-FQRYQQEDAHEFLQAFLEKLEICGS 281
Query: 296 --DKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDK 353
+G + T Q +F G ++ + C N DY S E L L+++ + ++ +
Sbjct: 282 DRTSFRGDI---TSQDVFSGRLISGLRCCNCDYVSETYEKSVGLSLEIEDVDTLGSALES 338
Query: 354 YVEVERLEGDNKYHAEQYGLQDAKKGVLFID-FPPVLQLQLKRFEYDFMRDTMVKINDRY 412
+ VE+L D + + + +K+ L +D P V LKRF+ + + M KI
Sbjct: 339 FTRVEKL--DEQLTCDNCNEKVSKEKQLLLDKLPLVATFHLKRFKNNGLY--MEKIYKHV 394
Query: 413 EFPSELDLDREDGKYLSPDADRSVRNLYTXXXXXXXXXXXXXXXYYAFIRPTLSEQWYKF 472
+ P E+DL Y+ + V Y +Y+ + + W+ F
Sbjct: 395 KIPLEIDLQ----PYMRNIQENEVSTKYHLYALVEHFGYSVAYGHYSSYVRSAPKIWHHF 450
Query: 473 DDERVTKEDNKRALEE 488
DD +VT+ D L +
Sbjct: 451 DDSKVTRIDEDMVLSQ 466
>AT5G26290.1 | Symbols: | TRAF-like family protein |
chr5:9226079-9227873 FORWARD LENGTH=333
Length = 333
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 75 SEIFVVGGYKWRVLIFPKGN----NVDYLSMYLDVADSASLPYGWSRYAQFSLAVVNQIQ 130
S +F GYKWR++++ GN D++S+Y + ++ SLP GW L V N
Sbjct: 74 SSVFEAVGYKWRLVLYVNGNEKDGGKDHVSLYAKIVETESLPVGWEVNVDLKLFVYNGKL 133
Query: 131 NKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLLIEAEVLVRR 184
NKY + T ++N + G+ +P YD + GY DT AE+ + +
Sbjct: 134 NKYLIV--TVKRYNNATKELGYGQLIPQSTFYDGNDGYREQDTGTFGAEIYIVK 185
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 4/135 (2%)
Query: 53 PPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSASLP 112
PP + FTW+I +F+ L K S F+VG W++ + PKG V +A +
Sbjct: 199 PPDNVFTWKILHFSTLEDKVYQSNEFLVGDRYWKLGLNPKGGLVPIFLYAQGFKANAVVT 258
Query: 113 YGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVND 172
+ YA +L + NQ + + G + +PL ++ D S+GY+VND
Sbjct: 259 ---TTYAATNLRLKNQRSSNHVTTYTAYWYLIPSGLGLGVNT-IPLSDVKDASKGYVVND 314
Query: 173 TLLIEAEVLVRRIVD 187
+++IE E+L + +
Sbjct: 315 SIIIEVEMLTVSVTN 329
>AT4G31670.1 | Symbols: UBP18 | ubiquitin-specific protease 18 |
chr4:15336007-15339506 REVERSE LENGTH=631
Length = 631
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 128/315 (40%), Gaps = 39/315 (12%)
Query: 186 VDYWNYDSKKETGYVGLKNQGATCYMNSLLQTLYH----IPYFRKAVYHMPTTENDMP-- 239
V+Y+N+D+ E GL N G +C+ N +LQ L + Y + + ND
Sbjct: 155 VEYFNWDNP-ELAPCGLMNCGNSCFANVILQCLSWTRPLVAYLLEKGHKRECMRNDWCFL 213
Query: 240 ---SGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLE- 295
+ A QS F +S ++ ++ LT G Y Q D E R + ++
Sbjct: 214 CEFQTHVERASQSRF---PFSPMNIISR-LTNIGGTLGYGR--QEDAHEFMRYAIDMMQS 267
Query: 296 ---DKMKGTVV------EGT-IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKG-C 344
D+ G + E T IQ +F G + ++C ++ S + E+ DL +++ G
Sbjct: 268 VCLDEFGGEKIVPPRSQETTLIQYIFGGLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDA 327
Query: 345 RDVYASFDKYVEVERLEGDNKYHAEQYG-LQDAKKGVLFIDFPPVLQLQLKRFEYDFMRD 403
+ D++ E L GDN Y ++ A K + P +L + LKR++
Sbjct: 328 GSLEECLDQFTAEEWLHGDNMYKCDRCSDYVKACKRLTIRRAPNILTIALKRYQ----GG 383
Query: 404 TMVKINDRYEFPSELDLDREDGKYLSPDADRS-VRNLYTXXXXXXXXXXXXXXXYYAFIR 462
K+N R FP LDL+ Y+S D S V LY Y +I+
Sbjct: 384 RYGKLNKRISFPETLDLN----PYMSEGGDGSDVYKLYAVIVHLDMLNASFFGHYICYIK 439
Query: 463 PTLSEQWYKFDDERV 477
WY+ DD +
Sbjct: 440 D-FCGNWYRIDDSEI 453
>AT5G52330.2 | Symbols: | TRAF-like superfamily protein |
chr5:21247596-21249288 REVERSE LENGTH=346
Length = 346
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 72/122 (59%), Gaps = 10/122 (8%)
Query: 89 IFPKGNNV-DYLSMYLDVADSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARE 147
++P+G +V ++LS++L VA+ L GWS+ AQF+++V+++ K DT H+F +E
Sbjct: 1 MYPEGCDVSNHLSLFLCVANHDELLPGWSQLAQFTISVMHKDPKKSKF-SDTLHRFWKKE 59
Query: 148 SDWGFTSFMPLGELYDPSRGYLVND-TLLIEAEV-LVRRIVD---YWNYDSKKETGYVGL 202
DWG+ FM L +L D G++ + L IE +V ++R VD + +Y K E V
Sbjct: 60 HDWGWKKFMELPKLRD---GFIDDSGCLTIETKVQVIRDRVDRPFFLDYGYKTEIVRVYF 116
Query: 203 KN 204
+N
Sbjct: 117 RN 118
>AT1G65050.1 | Symbols: | TRAF-like superfamily protein |
chr1:24164286-24165679 REVERSE LENGTH=228
Length = 228
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 77/149 (51%), Gaps = 12/149 (8%)
Query: 53 PPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVD----YLSMYLDVADS 108
PP+S ++L K S F GG+ WR++++PKGN D ++SMY++ S
Sbjct: 18 PPSSSLV----RLSQLANDKYESPPFSSGGHNWRLVVYPKGNEADNGRGFVSMYVECLSS 73
Query: 109 ASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQ-HQFNARESDWGFTSFMPLGELYDPSRG 167
+ P Y F V ++ + +Y +D + +FN+ ++ WG + +P+ L D ++G
Sbjct: 74 TTPPIDVFVYLTF--FVFSEEEKRYLSIQDVEVKRFNSSKTVWGLSQVLPVETLKDRAKG 131
Query: 168 YLVNDTLLIEAEVLVRRIVDYWNYDSKKE 196
++++ L +LV+ + Y DS+ +
Sbjct: 132 FILS-RLFHNPPLLVKTLKLYPKGDSEAD 159
>AT2G42470.1 | Symbols: | TRAF-like family protein |
chr2:17679887-17685187 REVERSE LENGTH=898
Length = 898
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 8/141 (5%)
Query: 56 SRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSASLPYGW 115
+ FT+ IDNF L S IF+ GG +W + ++ D+L++ L V + SL YGW
Sbjct: 32 TSFTFEIDNF--LEKGDAISPIFISGGCEWFIRVWQIE---DHLAVTLSVPNLESLRYGW 86
Query: 116 SRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLL 175
R ++S V+NQ + + + F +W MP +L + L N+ L+
Sbjct: 87 ERRTKYSFIVLNQSGRELERTFEVEGLFCTELLEWCHPKVMPTNKLQEVC---LENNKLI 143
Query: 176 IEAEVLVRRIVDYWNYDSKKE 196
IE +V V +V ++KE
Sbjct: 144 IEVQVKVLEVVHEGGVTTEKE 164
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 58 FTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVD-YLSMYLDVADSASLPYGWS 116
T + NF++ + + S F GG W + +PKG+ D YLS++L D SL W
Sbjct: 492 LTLTVTNFSQ-KSSPINSPPFPSGGCNWYIKFYPKGSADDNYLSLFLSPDDPKSLGLNWK 550
Query: 117 RYAQFSLAVVNQIQNKYTVRKDTQHQFNARES-DWGFTSFMPLGELYDPSRGYLVNDTLL 175
R A F ++NQ + + Q+ +S WGF +P +L D + +L ND
Sbjct: 551 RRANFYFVLLNQSGKELHRTPEIGDQWFCDDSLSWGFPQTLPRKKLLD--KIFLDNDRFN 608
Query: 176 IEAEVLVRRIVD 187
IE + V +V+
Sbjct: 609 IEIYIKVIEVVE 620
>AT5G26300.1 | Symbols: | TRAF-like family protein |
chr5:9229326-9231033 FORWARD LENGTH=349
Length = 349
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 75 SEIFVVGGYKWRVLIFPKGN----NVDYLSMYLDVADSASLPYGWSRYAQFSLAVVNQIQ 130
S +F GYKWR++++ GN D++S+Y+ + ++ LP GW L + N
Sbjct: 81 SSVFEAAGYKWRLVLYVNGNPNDSGNDHISLYVRIEETEYLPRGWEVNVDLKLFIHNGKL 140
Query: 131 NKYTVRKD-TQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLLIEAEVLVRR 184
NKY D T +N + +WGF +P Y+ + GY+ D AE+ + +
Sbjct: 141 NKYLAISDGTLKLYNDAKREWGFGQLIPHVTFYN-TYGYIEQDIGSFGAEIFIVK 194
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 29/145 (20%)
Query: 53 PPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSASLP 112
PPT+ FTW+I +F+ L K YS+ F+V WR+ PKG D P
Sbjct: 208 PPTNVFTWKILHFSILEDKFYYSDDFLVEDRYWRLGFNPKG-------------DGGGRP 254
Query: 113 YGWSRY----AQFSLAVVNQIQNKYTVRKDTQHQFNARE---SDW---------GFTSFM 156
Y + + AV +R Q N R+ + W G + +
Sbjct: 255 YALPIFLFAQGHKANAVATNTWGAANLRLKNQRSTNHRQIYTAAWYPIGSGYGVGVNNII 314
Query: 157 PLGELYDPSRGYLVNDTLLIEAEVL 181
L +L D S+GYLVN+ ++ EA ++
Sbjct: 315 LLADLNDASQGYLVNNAIIFEAAMV 339
>AT3G58280.1 | Symbols: | Arabidopsis phospholipase-like protein
(PEARLI 4) with TRAF-like domain |
chr3:21578617-21579537 REVERSE LENGTH=243
Length = 243
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%)
Query: 111 LPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLV 170
+P GW RY +F + +VN I ++V K F+ +WGF +P L + + G+L+
Sbjct: 4 IPCGWRRYVEFRMTIVNHISPIHSVDKKGWRWFDENTKNWGFKDMIPAVILNNVNVGFLL 63
Query: 171 NDTLLIEAEVLVRRIVDYWNYDSKKE 196
N + I AEV V +D N +E
Sbjct: 64 NGEITIIAEVEVHEFIDTLNASQVEE 89
>AT1G65150.2 | Symbols: | TRAF-like family protein |
chr1:24204167-24205558 REVERSE LENGTH=296
Length = 296
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 65/123 (52%), Gaps = 11/123 (8%)
Query: 53 PPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVD----YLSMYLDVADS 108
PP+S ++L +K S F G + WR+++ PKGN D ++SMY++ S
Sbjct: 18 PPSSTLV----RLSQLANEKYESPPFSSGAHNWRLVVHPKGNEADNGSGFVSMYVECLSS 73
Query: 109 ASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQ-HQFNARESDWGFTSFMPLGELYDPSRG 167
+ P +A + V ++ + KY +D + +FN+ ++ WG + +P+ L D ++G
Sbjct: 74 TTPPI--DVFAYLTFFVFSEEEKKYLSFQDVEVKRFNSSKTVWGLSKALPVETLKDRAKG 131
Query: 168 YLV 170
+++
Sbjct: 132 FIL 134
>AT1G65150.1 | Symbols: | TRAF-like family protein |
chr1:24204167-24205558 REVERSE LENGTH=296
Length = 296
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 65/123 (52%), Gaps = 11/123 (8%)
Query: 53 PPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVD----YLSMYLDVADS 108
PP+S ++L +K S F G + WR+++ PKGN D ++SMY++ S
Sbjct: 18 PPSSTLV----RLSQLANEKYESPPFSSGAHNWRLVVHPKGNEADNGSGFVSMYVECLSS 73
Query: 109 ASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQ-HQFNARESDWGFTSFMPLGELYDPSRG 167
+ P +A + V ++ + KY +D + +FN+ ++ WG + +P+ L D ++G
Sbjct: 74 TTPPI--DVFAYLTFFVFSEEEKKYLSFQDVEVKRFNSSKTVWGLSKALPVETLKDRAKG 131
Query: 168 YLV 170
+++
Sbjct: 132 FIL 134
>AT4G16045.1 | Symbols: | TRAF-like superfamily protein |
chr4:9089906-9091860 FORWARD LENGTH=382
Length = 382
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 97 DYLSMYLDVADSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFM 156
+ LS++L VA+ L GWS AQFS+AV N+ K + DT HQF +E DWG+ F+
Sbjct: 28 NCLSLFLCVANYEKLLPGWSHLAQFSVAVENKDPKKSKI-ADTLHQFWKKEHDWGWKKFI 86
Query: 157 PLGELYDPSRGYLVN-DTLLIEAEV 180
L +L D G++ D+L ++A+V
Sbjct: 87 ELPKLQD---GFIDKFDSLSLKAQV 108
>AT5G26280.2 | Symbols: | TRAF-like family protein |
chr5:9208724-9210403 FORWARD LENGTH=327
Length = 327
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 21/141 (14%)
Query: 53 PPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSASLP 112
PP + FTW+I F+ L K YS+ F+V WR+ PKG+ +LP
Sbjct: 186 PPNNVFTWKILRFSTLEDKFYYSDDFLVEDRYWRLGFNPKGDG---------GGRPHALP 236
Query: 113 YGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARE---SDW---------GFTSFMPLGE 160
+ AV +R Q N R+ + W G + + L +
Sbjct: 237 IFLFAQGHKANAVATNTWGAVNLRLKNQRSTNHRQIYSAAWYPIGSGYGVGVNNIILLAD 296
Query: 161 LYDPSRGYLVNDTLLIEAEVL 181
L D S+GYLVND ++ EAE++
Sbjct: 297 LNDASKGYLVNDAIIFEAEMV 317
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 45/109 (41%), Gaps = 20/109 (18%)
Query: 75 SEIFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSASLPYGWSRYAQFSLAVVNQIQNKY- 133
S +F GYKW + ++ SLP GW L V N +KY
Sbjct: 81 SSVFEAAGYKW-------------------IEETNSLPLGWEVNVDLKLFVHNGKLHKYL 121
Query: 134 TVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLLIEAEVLV 182
TV ++N + +WGF +P Y+ + GYL DT AE+ +
Sbjct: 122 TVTDGLVKRYNNAKKEWGFGQLIPRSTFYNANEGYLDQDTGSFGAEIFI 170
>AT1G69660.1 | Symbols: | TRAF-like family protein |
chr1:26199623-26200603 REVERSE LENGTH=231
Length = 231
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 12/160 (7%)
Query: 34 VVAQPETANAVESQPVAEPPPTSRFTWRIDNFTRLNTKKLYSEIFVVGGYKWRVLIFPKG 93
+VA P T + S PP +F+W + NF+ L S + +GG +W + ++PKG
Sbjct: 75 LVAPPLTNWEILSFDEKLSPP--KFSWNLKNFSELKEDVYTSNKYPMGGKEWVLKLYPKG 132
Query: 94 N---NVDYLSMYLDVADSASLPYGWSRYAQFSLAVVNQI-QNKYTVRKDTQHQFNARESD 149
N + YLS+Y+ +ADS +L + Q + V+N + N V+ ++ ++R
Sbjct: 133 NSRADGKYLSLYVHLADSETLKSDEKNFKQGHVRVLNPLGSNHVEVQSSCWYKESSR--G 190
Query: 150 WGFTSFMPLGELYDPSRGYL-VNDTLLIEAEVLVRRIVDY 188
WG+ F+ + L + YL D L +E E V Y
Sbjct: 191 WGWDHFLSIANL---RKTYLDKEDALNVEIEFKVVSATKY 227
>AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10479341 REVERSE LENGTH=672
Length = 672
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 125/319 (39%), Gaps = 43/319 (13%)
Query: 186 VDYWNYDSKKETGYVGLKNQGATCYMNSLLQTLYH----IPYFRKAVYHMPTTENDMP-- 239
V Y+N+D + GL N G +C+ N +LQ L + Y + + ND
Sbjct: 161 VRYYNWD-RPIMAPCGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFL 219
Query: 240 ---SGSIPLALQSLFYKLQYSDTSVATK--ELTKSFGWDTYDSFMQHDVQELNRVLCEKL 294
+ A S F +S ++ ++ + + G+ Q D EL R + +
Sbjct: 220 CEFENHLDRANYSRF---PFSPMNIISRLPNIGGNLGYG-----RQEDAHELMRFAIDMM 271
Query: 295 E----DKMKGTVV------EGT-IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKG 343
+ D+ G V E T IQ +F G + ++C S + E+ DL +++ G
Sbjct: 272 QSVCLDEFGGEKVVPPRAQETTLIQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHG 331
Query: 344 -CRDVYASFDKYVEVERLEGDNKYHAEQYG-LQDAKKGVLFIDFPPVLQLQLKRFEYDFM 401
+ D++ E L+GDN Y ++ A K + P +L + LKRF+
Sbjct: 332 DAVSLEECLDQFTAKEWLQGDNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQ---- 387
Query: 402 RDTMVKINDRYEFPSELDLDREDGKYLSPDADRS-VRNLYTXXXXXXXXXXXXXXXYYAF 460
K+N R FP DL G Y+S + S V LY Y +
Sbjct: 388 GGRFGKLNKRISFPETFDL----GPYMSGGGEGSDVYKLYAVIVHLDMLNASFFGHYICY 443
Query: 461 IRPTLSEQWYKFDDERVTK 479
++ WY+ DD V K
Sbjct: 444 VK-DFRGNWYRIDDSEVEK 461
>AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10478388 REVERSE LENGTH=502
Length = 502
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 118/305 (38%), Gaps = 42/305 (13%)
Query: 200 VGLKNQGATCYMNSLLQTLYH----IPYFRKAVYHMPTTENDMP-----SGSIPLALQSL 250
GL N G +C+ N +LQ L + Y + + ND + A S
Sbjct: 4 CGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFLCEFENHLDRANYSR 63
Query: 251 FYKLQYSDTSVATK--ELTKSFGWDTYDSFMQHDVQELNRVLCEKLE----DKMKGTVV- 303
F +S ++ ++ + + G+ Q D EL R + ++ D+ G V
Sbjct: 64 F---PFSPMNIISRLPNIGGNLGYG-----RQEDAHELMRFAIDMMQSVCLDEFGGEKVV 115
Query: 304 -----EGT-IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKG-CRDVYASFDKYVE 356
E T IQ +F G + ++C S + E+ DL +++ G + D++
Sbjct: 116 PPRAQETTLIQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTA 175
Query: 357 VERLEGDNKYHAEQYG-LQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFP 415
E L+GDN Y ++ A K + P +L + LKRF+ K+N R FP
Sbjct: 176 KEWLQGDNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQ----GGRFGKLNKRISFP 231
Query: 416 SELDLDREDGKYLSPDADRS-VRNLYTXXXXXXXXXXXXXXXYYAFIRPTLSEQWYKFDD 474
DL G Y+S + S V LY Y +++ WY+ DD
Sbjct: 232 ETFDL----GPYMSGGGEGSDVYKLYAVIVHLDMLNASFFGHYICYVK-DFRGNWYRIDD 286
Query: 475 ERVTK 479
V K
Sbjct: 287 SEVEK 291
>AT1G04300.2 | Symbols: | TRAF-like superfamily protein |
chr1:1148818-1153095 REVERSE LENGTH=997
Length = 997
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 105 VADSASLPYGWSRYAQFSLAVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDP 164
V A L GWS++AQF+++V++Q K DT H+F +E DWG+ FM L +L D
Sbjct: 41 VGSFAILEAGWSQFAQFTISVLSQDLKKSKF-SDTLHRFWKKEHDWGWKKFMELPKLKD- 98
Query: 165 SRGYL-VNDTLLIEAEV-LVRRIVD 187
G++ + L IEA+V ++R VD
Sbjct: 99 --GFIDESGCLTIEAKVQVIRERVD 121