Miyakogusa Predicted Gene
- Lj6g3v1038770.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1038770.1 Non Chatacterized Hit- tr|F6GTF8|F6GTF8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,25.77,8e-18,PPR: pentatricopeptide repeat domain,Pentatricopeptide
repeat; seg,NULL; PPR_2,Pentatricopeptide rep,CUFF.58796.1
(772 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 426 e-119
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 395 e-110
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 393 e-109
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 383 e-106
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 378 e-105
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 359 3e-99
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 358 8e-99
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 356 3e-98
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 353 2e-97
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 353 3e-97
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 352 5e-97
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 349 4e-96
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 348 1e-95
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 348 1e-95
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 347 2e-95
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 5e-95
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 345 9e-95
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 1e-94
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 344 1e-94
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 342 6e-94
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 342 8e-94
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 338 9e-93
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 337 2e-92
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 337 2e-92
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 6e-92
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 334 2e-91
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 333 3e-91
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 333 3e-91
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 330 3e-90
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 2e-89
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 327 3e-89
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 4e-89
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 2e-88
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 323 3e-88
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 323 4e-88
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 5e-88
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 8e-88
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 321 1e-87
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 321 2e-87
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 7e-87
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 9e-87
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 318 1e-86
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 317 3e-86
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 316 4e-86
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 313 4e-85
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 2e-84
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 2e-84
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 4e-84
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 309 4e-84
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 308 8e-84
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 308 9e-84
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 307 2e-83
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 307 2e-83
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 1e-82
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 305 1e-82
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 4e-82
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 302 7e-82
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 9e-82
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 301 2e-81
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 1e-80
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 2e-80
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 297 2e-80
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 3e-80
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 6e-80
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 7e-80
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 9e-80
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 8e-79
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 8e-79
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 8e-79
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 1e-78
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 2e-77
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 286 5e-77
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 7e-77
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 2e-76
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 4e-75
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 4e-75
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 277 3e-74
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 5e-74
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 7e-74
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 7e-74
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 4e-73
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 3e-72
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 4e-72
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 2e-71
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 7e-71
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 8e-71
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 263 3e-70
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 6e-70
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 259 3e-69
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 5e-69
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 8e-69
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 9e-69
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 9e-69
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 5e-67
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 6e-67
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 6e-67
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 3e-66
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 248 2e-65
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 248 2e-65
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 241 1e-63
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 2e-63
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 240 2e-63
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 240 4e-63
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 5e-63
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 7e-63
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 7e-63
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 3e-62
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 3e-62
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 236 5e-62
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 235 1e-61
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 231 2e-60
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 3e-60
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 3e-60
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 4e-60
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 6e-60
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 228 1e-59
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 4e-59
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 6e-59
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 1e-58
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 2e-58
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 6e-58
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 2e-57
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 3e-57
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 3e-56
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 6e-56
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 216 6e-56
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 7e-56
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 215 1e-55
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 213 3e-55
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 3e-54
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 3e-54
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 208 1e-53
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 206 5e-53
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 5e-53
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 5e-53
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 206 7e-53
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 1e-52
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 9e-52
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 201 1e-51
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 201 1e-51
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 2e-51
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 201 2e-51
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 3e-51
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 3e-51
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 200 4e-51
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 198 1e-50
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 198 1e-50
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 1e-50
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 3e-49
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 9e-49
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 2e-48
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 4e-48
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 4e-48
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 7e-47
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 1e-46
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 1e-46
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 184 1e-46
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 4e-46
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 181 1e-45
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 3e-45
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 7e-45
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 179 9e-45
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 177 2e-44
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 7e-44
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 8e-44
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 2e-43
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 6e-43
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 1e-42
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 2e-42
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 3e-42
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 5e-42
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 1e-41
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 5e-41
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 5e-40
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 3e-39
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 1e-38
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 1e-38
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 1e-37
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 154 2e-37
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 4e-37
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 5e-37
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 2e-34
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 4e-34
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 5e-34
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 1e-33
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 4e-32
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 1e-30
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 6e-29
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 1e-24
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 93 5e-19
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 93 6e-19
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 92 1e-18
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 86 7e-17
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 9e-16
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 3e-15
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 80 8e-15
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 3e-14
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 77 3e-14
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 5e-14
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 1e-13
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 1e-13
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 1e-13
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 3e-13
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-13
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-13
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-13
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 7e-13
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 9e-13
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 72 1e-12
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 2e-12
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 3e-12
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 70 4e-12
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 7e-12
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-11
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-11
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 67 5e-11
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 6e-11
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-10
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 65 2e-10
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 65 2e-10
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 3e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 65 3e-10
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 64 3e-10
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 5e-10
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 63 6e-10
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 9e-10
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 62 2e-09
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 2e-09
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 3e-09
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 4e-09
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 8e-09
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 59 1e-08
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 56 8e-08
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 55 2e-07
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 55 2e-07
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-07
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-07
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 53 7e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 53 8e-07
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 9e-07
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 9e-07
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 53 1e-06
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 50 5e-06
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 7e-06
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust.
Identities = 253/726 (34%), Positives = 378/726 (52%), Gaps = 12/726 (1%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VFD+ L WN L++ + F +I F +M+ V +
Sbjct: 150 RVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR 209
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
G+QLH +K R +L+ Y + A+ +FD+ W +
Sbjct: 210 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 269
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
YV G+ L +F +M+ + GR VH I VK
Sbjct: 270 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 329
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
E N+LL MY CG + A+ VF +M + VVS+TSMI G + G EA++LF M
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGA 354
EG+S PD+ V+ VL C L G+ +H ++ N + D+ +SN L+ MYA CG+
Sbjct: 390 EEGIS--PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 447
Query: 355 SRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEG-LKPTAVSISSIL 413
++A LVF +M K ++SW ++I GY K + NE LF + E P +++ +L
Sbjct: 448 MQEAELVFSEMRVKDIISWNTIIGGY-SKNCYANEALSLFNLLLEEKRFSPDERTVACVL 506
Query: 414 PACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTI 473
PAC +++ GREIHGY++RNG D +V+N+++DMY K GA+ A +F ++ KD +
Sbjct: 507 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV 566
Query: 474 SWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNH 533
SW++MI G +HG GK + LF Q+ R + D+ + + L+ACS + + +EG FN
Sbjct: 567 SWTVMIAGYGMHGFGKEAIALFNQM-RQAGIEADEISFVSLLYACSHSGLVDEGWRFFNI 625
Query: 534 IR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYA 588
+R P + H A V +LAR G +A FI I + LL GCRIH +
Sbjct: 626 MRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVK 685
Query: 589 LGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYR 648
L ++V E++ ELEP N YVL+ N +A K + V ++R+ I +RGL+ C+W +
Sbjct: 686 LAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIK 745
Query: 649 EKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDE-ERECTQIEHSE 707
+V++F GD S+P + I + L+ M EG P ++L D +E E+E HSE
Sbjct: 746 GRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSE 805
Query: 708 LLALAFGLISSQAGP-IRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHC 766
LA+A G+ISS G IR+ KN RVC CH+ AKF+SK+T REI+L+D N FH FK GHC
Sbjct: 806 KLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHC 865
Query: 767 TCEDFW 772
+C FW
Sbjct: 866 SCRGFW 871
Score = 194 bits (492), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 202/425 (47%), Gaps = 14/425 (3%)
Query: 144 LYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXX 203
+Y + D+ A +FD+ + W L G ++ LF +M+
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197
Query: 204 XXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMP 263
+ S+ G +H +K G NSL+ Y+ + AR VF++M
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 264 CKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHG 323
+DV+SW S+I G V NG + + +F +M + G+ + DL + +V C + G
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI--DLATIVSVFAGCADSRLISLG 315
Query: 324 REIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKK 383
R +H V+ + NTLL MY+ CG A+ VF +M ++VVS+TSMI GY ++
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYARE 375
Query: 384 GGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINV 443
G E +LF +M EG+ P +++++L C R G+ +H ++ N + FDI V
Sbjct: 376 -GLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFV 434
Query: 444 SNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSE 503
SNA++DMY K G++ A VF EM KD ISW+ +I G S + + LF L
Sbjct: 435 SNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR 494
Query: 504 APLDDNIYAAALHACSTARMFEEGRVCFNHI-RGPMIA--HCAQK-VSLLARCG------ 553
D+ A L AC++ F++GR +I R + H A V + A+CG
Sbjct: 495 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 554
Query: 554 -LFDE 557
LFD+
Sbjct: 555 MLFDD 559
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 170/358 (47%), Gaps = 8/358 (2%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIR 275
SL+ G++V G + + L MY +CG +++A VF+++ + + W ++
Sbjct: 109 SLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMN 168
Query: 276 GCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGV 335
++G+ S ++ LF++M G V+ D S V + S+ G ++HG+++++G
Sbjct: 169 ELAKSGDFSGSIGLFKKMMSSG--VEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGF 226
Query: 336 ECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFR 395
+ N+L+ Y AR VF++M + V+SW S+I GYV G + +F
Sbjct: 227 GERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN-GLAEKGLSVFV 285
Query: 396 KMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSG 455
+M G++ +I S+ C GR +H ++ + N ++DMY K G
Sbjct: 286 QMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCG 345
Query: 456 AIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAAL 515
+ A VF EM+++ +S++ MI G + G V LF ++E +P D A L
Sbjct: 346 DLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP-DVYTVTAVL 404
Query: 516 HACSTARMFEEGRVCFNHIR----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQ 569
+ C+ R+ +EG+ I+ G I + + A+CG EA + E +++
Sbjct: 405 NCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD 462
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 180/384 (46%), Gaps = 26/384 (6%)
Query: 265 KDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDL--VMVSTVLPVCGMIGSLKH 322
+ V + +R ++G L A++L +S K D+ + +VL +C SLK
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKLL------CVSGKWDIDPRTLCSVLQLCADSKSLKD 112
Query: 323 GREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVK 382
G+E+ ++ NG D L + L MY +CG ++A VF+++ + + W ++ K
Sbjct: 113 GKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAK 172
Query: 383 KGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDIN 442
G F+ + LF+KM S G++ + + S + + + S G ++HG++L++G +
Sbjct: 173 SGDFSGSI-GLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNS 231
Query: 443 VSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNS 502
V N+++ Y+K+ + A VF EM E+D ISW+ +I G +G + G+ +F Q+ S
Sbjct: 232 VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM-LVS 290
Query: 503 EAPLDDNIYAAALHACSTARMFEEGR--------VCFNHIRGPMIAHCAQKVSLLARCGL 554
+D + C+ +R+ GR CF+ C + + ++CG
Sbjct: 291 GIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED----RFCNTLLDMYSKCGD 346
Query: 555 FDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVL--LL 612
D A RE ++ ++ G G ++ E++ E E ++ + Y + +L
Sbjct: 347 LDSAKAVFREMS-DRSVVSYTSMIAGYAREGLAGEAVKLFEEM-EEEGISPDVYTVTAVL 404
Query: 613 NWHAGKGKLDMVDKIRETIRERGL 636
N A LD ++ E I+E L
Sbjct: 405 NCCARYRLLDEGKRVHEWIKENDL 428
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 239/701 (34%), Positives = 364/701 (51%), Gaps = 52/701 (7%)
Query: 117 SLGKQLHTHAVKLALSSRAHTLIAL-IHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKL 175
S KQLH ++ S +HT ++ I +Y +L + A LF W + +
Sbjct: 22 SQAKQLHAQFIRT--QSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRC 79
Query: 176 YVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGE 235
+ + + AL F M MM LR G VH V+LG++ +
Sbjct: 80 FTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCD 139
Query: 236 VFASNSLLKMY---------VDCGSMRD---------------------------ARLVF 259
++ N+L+ MY + G++ D R VF
Sbjct: 140 LYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVF 199
Query: 260 EKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGS 319
E MP KDVVS+ ++I G Q+G +A+ + R M L KPD +S+VLP+
Sbjct: 200 EVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDL--KPDSFTLSSVLPIFSEYVD 257
Query: 320 LKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRG 379
+ G+EIHGY++R G++ DV + ++L+ MYA D+ VF ++ + +SW S++ G
Sbjct: 258 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAG 317
Query: 380 YVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEF 439
YV+ G +N E RLFR+M + +KP AV+ SS++PAC +A+ G+++HGY+LR G
Sbjct: 318 YVQNGRYN-EALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGS 376
Query: 440 DINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLE 499
+I +++A++DMY K G I A +F MN D +SW+ +I G +LHG G V LF +++
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK 436
Query: 500 RNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR-----GPMIAHCAQKVSLLARCGL 554
R P + + A L ACS + +E FN + + H A LL R G
Sbjct: 437 RQGVKP-NQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGK 495
Query: 555 FDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNW 614
+EA FI + +E V LL C +H L ++V E++ ++ N YVL+ N
Sbjct: 496 LEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNM 555
Query: 615 HAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGF 674
+A G+ + K+R +R++GL+ K AC+W + K H F +GD SHP +I L+
Sbjct: 556 YASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAV 615
Query: 675 MEEMRTEGVEPKWDFSLHDVDEE--RECTQIEHSELLALAFGLISSQAG-PIRLEKNSRV 731
ME+M EG LHDVDEE RE HSE LA+AFG+I+++ G IR+ KN R+
Sbjct: 616 MEQMEKEGYVADTSGVLHDVDEEHKRELL-FGHSERLAVAFGIINTEPGTTIRVTKNIRI 674
Query: 732 CRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
C CH KF+SK+T REII++D + FHHF G+C+C D+W
Sbjct: 675 CTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 117/264 (44%), Gaps = 2/264 (0%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VF+ P D +++NT+I + + + A+ +M +
Sbjct: 197 RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYV 256
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
D GK++H + ++ + S + +L+ +YA I ++ +F + W L
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
YV G AL LF +MV + +L G+ +H ++ G
Sbjct: 317 GYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGS 376
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
+F +++L+ MY CG+++ AR +F++M D VSWT++I G +G EA+ LF M
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK 436
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIG 318
+G VKP+ V VL C +G
Sbjct: 437 RQG--VKPNQVAFVAVLTACSHVG 458
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 85/172 (49%), Gaps = 5/172 (2%)
Query: 306 MVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQM 365
++ T++ I S +++H +R S ++ +Y + +A L+F+ +
Sbjct: 7 LIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSAS-IVISIYTNLKLLHEALLLFKTL 65
Query: 366 PSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHG 425
S V++W S+IR + + F+ + F +M + G P S+L +C + + G
Sbjct: 66 KSPPVLAWKSVIRCFTDQSLFS-KALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFG 124
Query: 426 REIHGYLLRNGVEFDINVSNAVIDMYVK---SGAIACALNVFGEMNEKDTIS 474
+HG+++R G++ D+ NA+++MY K G+ NVF EM ++ + S
Sbjct: 125 ESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNS 176
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/661 (33%), Positives = 344/661 (52%), Gaps = 12/661 (1%)
Query: 120 KQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLE 179
KQ+H + L L + LIH +S DI A+ +FD W + + Y
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 180 GMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFAS 239
+ AL ++ M + L+ GR VH +LG + +VF
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 240 NSLLKMYVDCGSMRDARLVFEKMPC--KDVVSWTSMIRGCVQNGELSEAMELFRRMNLEG 297
N L+ +Y C + AR VFE +P + +VSWT+++ QNGE EA+E+F +M
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM--RK 215
Query: 298 LSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRD 357
+ VKPD V + +VL + LK GR IH +V+ G+E + L +L MYA CG
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275
Query: 358 ARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACG 417
A+++F++M S ++ W +MI GY K G + E +F +M ++ ++P +SI+S + AC
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNG-YAREAIDMFHEMINKDVRPDTISITSAISACA 334
Query: 418 RIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSM 477
++ S + R ++ Y+ R+ D+ +S+A+IDM+ K G++ A VF ++D + WS
Sbjct: 335 QVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSA 394
Query: 478 MIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFN----H 533
MI G LHG+ + + L+R +ER P +D + L AC+ + M EG FN H
Sbjct: 395 MIVGYGLHGRAREAISLYRAMERGGVHP-NDVTFLGLLMACNHSGMVREGWWFFNRMADH 453
Query: 534 IRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQV 593
P H A + LL R G D+A I+ ++ V LL C+ H LG+
Sbjct: 454 KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYA 513
Query: 594 IEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHV 653
+QL ++P N +YV L N +A D V ++R ++E+GL C+W R ++
Sbjct: 514 AQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEA 573
Query: 654 FGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDV-DEERECTQIEHSELLALA 712
F GD SHPR +EI ++ ++ G D SLHD+ DEE E T HSE +A+A
Sbjct: 574 FRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIA 633
Query: 713 FGLISS-QAGPIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDF 771
+GLIS+ Q P+R+ KN R C CH K +SK+ REI+++D N FHHFK G C+C D+
Sbjct: 634 YGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDY 693
Query: 772 W 772
W
Sbjct: 694 W 694
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 202/448 (45%), Gaps = 8/448 (1%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
QVFD P WN +I + NNHF A+ ++ M V A +
Sbjct: 74 QVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLS 133
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDC---WTF 171
+G+ +H +L + LI LYA + A+T+F+ P WT
Sbjct: 134 HLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGL-PLPERTIVSWTA 192
Query: 172 LAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLG 231
+ Y G P ALE+F +M + L+QGR +H VK+G
Sbjct: 193 IVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG 252
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFR 291
LE E SL MY CG + A+++F+KM +++ W +MI G +NG EA+++F
Sbjct: 253 LEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFH 312
Query: 292 RMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYAD 351
M + V+PD + +++ + C +GSL+ R ++ Y+ R+ DV +S+ L+ M+A
Sbjct: 313 EMINK--DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370
Query: 352 CGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISS 411
CG+ ARLVF++ + VV W++MI GY G E L+R M G+ P V+
Sbjct: 371 CGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGR-AREAISLYRAMERGGVHPNDVTFLG 429
Query: 412 ILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKD 471
+L AC + G + + + VID+ ++G + A V M +
Sbjct: 430 LLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQP 489
Query: 472 TIS-WSMMIFGCSLHGQGKLGVDLFRQL 498
++ W ++ C H +LG +QL
Sbjct: 490 GVTVWGALLSACKKHRHVELGEYAAQQL 517
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 184/375 (49%), Gaps = 15/375 (4%)
Query: 219 QGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCV 278
Q + +H + LGL+ F L+ G + AR VF+ +P + W ++IRG
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 279 QNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECD 338
+N +A+ ++ M L V PD +L C + L+ GR +H + R G + D
Sbjct: 96 RNNHFQDALLMYSNMQLA--RVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDAD 153
Query: 339 VLLSNTLLKMYADCGASRDARLVFE--QMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRK 396
V + N L+ +YA C AR VFE +P +T+VSWT+++ Y + G E +F +
Sbjct: 154 VFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE-PMEALEIFSQ 212
Query: 397 MNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGA 456
M +KP V++ S+L A + K GR IH +++ G+E + ++ ++ MY K G
Sbjct: 213 MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQ 272
Query: 457 IACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALH 516
+A A +F +M + I W+ MI G + +G + +D+F ++ P D +A+
Sbjct: 273 VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP-DTISITSAIS 331
Query: 517 ACSTARMFEEGRVCFNHI-----RGPMIAHCAQKVSLLARCGLFDEA-MVFIREQKIEQH 570
AC+ E+ R + ++ R + A + + A+CG + A +VF ++ +++
Sbjct: 332 ACAQVGSLEQARSMYEYVGRSDYRDDVFISSAL-IDMFAKCGSVEGARLVF--DRTLDRD 388
Query: 571 PEVLRKLLEGCRIHG 585
V ++ G +HG
Sbjct: 389 VVVWSAMIVGYGLHG 403
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust.
Identities = 242/724 (33%), Positives = 368/724 (50%), Gaps = 17/724 (2%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLR-HAVXXXXXXXXXXXXASRLAA 114
VF K E + +WN L+ + +F A+ + +ML V
Sbjct: 151 VFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIP 210
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
D + GK++H H V+ + ALI +Y D+ A+ LFD+ W +
Sbjct: 211 DLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMIS 270
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
Y GM LELF M ++G R GRD+H + G
Sbjct: 271 GYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAV 330
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
++ NSL +MY++ GS R+A +F +M KD+VSWT+MI G N +A++ +R M+
Sbjct: 331 DISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMD 390
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGA 354
+ SVKPD + V+ VL C +G L G E+H ++ + V+++N L+ MY+ C
Sbjct: 391 QD--SVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKC 448
Query: 355 SRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFR--LFRKMNSEGLKPTAVSISSI 412
A +F +P K V+SWTS+I G NN F +F + L+P A+++++
Sbjct: 449 IDKALDIFHNIPRKNVISWTSIIAGL----RLNNRCFEALIFLRQMKMTLQPNAITLTAA 504
Query: 413 LPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDT 472
L AC RI + G+EIH ++LR GV D + NA++DMYV+ G + A + F +KD
Sbjct: 505 LAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDV 563
Query: 473 ISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFN 532
SW++++ G S GQG + V+LF ++ ++ P D+ + + L CS ++M +G + F+
Sbjct: 564 TSWNILLTGYSERGQGSMVVELFDRMVKSRVRP-DEITFISLLCGCSKSQMVRQGLMYFS 622
Query: 533 HIRG----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYA 588
+ P + H A V LL R G EA FI++ + P V LL CRIH +
Sbjct: 623 KMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKID 682
Query: 589 LGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYR 648
LG+ + + EL+ + Y+LL N +A GK V K+R ++E GL C+W +
Sbjct: 683 LGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVK 742
Query: 649 EKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDE-ERECTQIEHSE 707
KVH F + D HP+ KEI + L+GF E+M G+ + S D E R+ HSE
Sbjct: 743 GKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSE 802
Query: 708 LLALAFGLISSQAG-PIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHC 766
A+AFGLI++ G PI + KN +C CHD KF+SK REI ++D FHHFK G C
Sbjct: 803 RKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGEC 862
Query: 767 TCED 770
+C D
Sbjct: 863 SCGD 866
Score = 205 bits (522), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 197/361 (54%), Gaps = 4/361 (1%)
Query: 140 ALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXX 199
A + ++ ++ A +F K + W L Y +G A+ L+HRM+
Sbjct: 134 AFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVK 193
Query: 200 XXXXXXX-XXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLV 258
+ L +G++VH+ V+ G E ++ N+L+ MYV CG ++ ARL+
Sbjct: 194 PDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLL 253
Query: 259 FEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIG 318
F++MP +D++SW +MI G +NG E +ELF M GLSV PDL+ +++V+ C ++G
Sbjct: 254 FDRMPRRDIISWNAMISGYFENGMCHEGLELFFAM--RGLSVDPDLMTLTSVISACELLG 311
Query: 319 SLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIR 378
+ GR+IH Y++ G D+ + N+L +MY + G+ R+A +F +M K +VSWT+MI
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371
Query: 379 GYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVE 438
GY + ++ +R M+ + +KP ++++++L AC + G E+H ++ +
Sbjct: 372 GY-EYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 439 FDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQL 498
+ V+N +I+MY K I AL++F + K+ ISW+ +I G L+ + + RQ+
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Query: 499 E 499
+
Sbjct: 491 K 491
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 186/345 (53%), Gaps = 7/345 (2%)
Query: 219 QGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCV 278
+G V+ IA+ V N+ L M+V G++ DA VF KM +++ SW ++ G
Sbjct: 112 EGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYA 171
Query: 279 QNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECD 338
+ G EAM L+ RM G VKPD+ VL CG I L G+E+H ++VR G E D
Sbjct: 172 KQGYFDEAMCLYHRMLWVG-GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELD 230
Query: 339 VLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMN 398
+ + N L+ MY CG + ARL+F++MP + ++SW +MI GY + G +E LF M
Sbjct: 231 IDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFEN-GMCHEGLELFFAMR 289
Query: 399 SEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIA 458
+ P ++++S++ AC + + GR+IH Y++ G DI+V N++ MY+ +G+
Sbjct: 290 GLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWR 349
Query: 459 CALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHAC 518
A +F M KD +SW+ MI G + +D +R ++++S P D+ AA L AC
Sbjct: 350 EAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKP-DEITVAAVLSAC 408
Query: 519 STARMFEEGRVCFN-HIRGPMIAH---CAQKVSLLARCGLFDEAM 559
+T + G I+ +I++ +++ ++C D+A+
Sbjct: 409 ATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKAL 453
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 122/245 (49%), Gaps = 3/245 (1%)
Query: 274 IRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN 333
+ G NG+L EAM+L M ++V D+ + ++ +C + + G +++ + +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFV--ALVRLCEWKRAQEEGSKVYSIALSS 123
Query: 334 GVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRL 393
V L N L M+ G DA VF +M + + SW ++ GY K+G F+ +
Sbjct: 124 MSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLY 183
Query: 394 FRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVK 453
R + G+KP + +L CG I G+E+H +++R G E DI+V NA+I MYVK
Sbjct: 184 HRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVK 243
Query: 454 SGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAA 513
G + A +F M +D ISW+ MI G +G G++LF + S P D +
Sbjct: 244 CGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDP-DLMTLTS 302
Query: 514 ALHAC 518
+ AC
Sbjct: 303 VISAC 307
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 125/312 (40%), Gaps = 4/312 (1%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
++F + D ++W T+I + N AI T+ M + +V A
Sbjct: 353 KLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLG 412
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
D G +LH A+K L S LI++Y+ I A +F WT +
Sbjct: 413 DLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIA 472
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
L AL +F R + +G+L G+++H ++ G+
Sbjct: 473 GLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGL 531
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
+ F N+LL MYV CG M A F KDV SW ++ G + G+ S +ELF RM
Sbjct: 532 DDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMV 590
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGA 354
V+PD + ++L C ++ G + GV ++ ++ + G
Sbjct: 591 KS--RVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGE 648
Query: 355 SRDARLVFEQMP 366
++A ++MP
Sbjct: 649 LQEAHKFIQKMP 660
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 228/728 (31%), Positives = 366/728 (50%), Gaps = 23/728 (3%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQ-MLRHAVXXXXXXXXXXXXASRLAA 114
FD D AWN +I + + I F+ ML + A R
Sbjct: 108 TFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVI 167
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
D G ++H A+K + +LIHLY+ + A+ LFD+ W +
Sbjct: 168 D---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMIS 224
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
Y G + AL L + + G +G +H ++K GLE
Sbjct: 225 GYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEA----GDFNRGVTIHSYSIKHGLES 280
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
E+F SN L+ +Y + G +RD + VF++M +D++SW S+I+ N + A+ LF+ M
Sbjct: 281 ELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMR 340
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNG--VECDVLLSNTLLKMYADC 352
L ++PD + + ++ + +G ++ R + G+ +R G +E D+ + N ++ MYA
Sbjct: 341 LS--RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE-DITIGNAVVVMYAKL 397
Query: 353 GASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEG-LKPTAVSISS 411
G AR VF +P+ V+SW ++I GY + G F +E ++ M EG + + S
Sbjct: 398 GLVDSARAVFNWLPNTDVISWNTIISGYAQNG-FASEAIEMYNIMEEEGEIAANQGTWVS 456
Query: 412 ILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKD 471
+LPAC + + + G ++HG LL+NG+ D+ V ++ DMY K G + AL++F ++ +
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVN 516
Query: 472 TISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCF 531
++ W+ +I HG G+ V LF+++ P D + L ACS + + +EG+ CF
Sbjct: 517 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKP-DHITFVTLLSACSHSGLVDEGQWCF 575
Query: 532 NHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGE 586
++ P + H V + R G + A+ FI+ ++ + LL CR+HG
Sbjct: 576 EMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGN 635
Query: 587 YALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTL 646
LGK E L E+EP + +VLL N +A GK + VD+IR +GL+ +
Sbjct: 636 VDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSME 695
Query: 647 YREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDV-DEERECTQIEH 705
KV VF TG+ +HP +E+ L +++ G P F L DV D+E+E + H
Sbjct: 696 VDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSH 755
Query: 706 SELLALAFGLISSQA-GPIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHG 764
SE LA+AF LI++ A IR+ KN RVC CH KF+SK+T REII++D N FHHFK+G
Sbjct: 756 SERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNG 815
Query: 765 HCTCEDFW 772
C+C D+W
Sbjct: 816 VCSCGDYW 823
Score = 174 bits (440), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 216/462 (46%), Gaps = 29/462 (6%)
Query: 141 LIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXX 200
L++LY L ++A+A+ FD W + Y G + F +
Sbjct: 92 LVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTP 151
Query: 201 XXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFE 260
++ G +H +A+K G +V+ + SL+ +Y ++ +AR++F+
Sbjct: 152 DYRTFPSVLKACR--TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFD 209
Query: 261 KMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSL 320
+MP +D+ SW +MI G Q+G EA+ L GL D V V ++L C G
Sbjct: 210 EMPVRDMGSWNAMISGYCQSGNAKEALTLS-----NGLRAM-DSVTVVSLLSACTEAGDF 263
Query: 321 KHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGY 380
G IH Y +++G+E ++ +SN L+ +YA+ G RD + VF++M + ++SW S+I+ Y
Sbjct: 264 NRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY 323
Query: 381 VKKGGFNNEVFR---LFRKMNSEGLKP---TAVSISSILPACGRIASHKHGREIHGYLLR 434
N + R LF++M ++P T +S++SIL G I + R + G+ LR
Sbjct: 324 ----ELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDI---RACRSVQGFTLR 376
Query: 435 NGVEF-DINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVD 493
G DI + NAV+ MY K G + A VF + D ISW+ +I G + +G ++
Sbjct: 377 KGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIE 436
Query: 494 LFRQLERNSEAPLDDNIYAAALHACSTARMFEE-----GRVCFNHIRGPMIAHCAQKVSL 548
++ +E E + + + L ACS A + GR+ N + + +
Sbjct: 437 MYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFV-VTSLADM 495
Query: 549 LARCGLFDEAM-VFIREQKIEQHPEVLRKLLEGCRIHGEYAL 589
+CG ++A+ +F + ++ P G HGE A+
Sbjct: 496 YGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAV 537
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 137/271 (50%), Gaps = 11/271 (4%)
Query: 236 VFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNL 295
V S L+ +Y G++ AR F+ + +DV +W MI G + G SE + F L
Sbjct: 86 VCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFML 145
Query: 296 EGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGAS 355
+ PD +VL C ++ G +IH ++ G DV ++ +L+ +Y+ A
Sbjct: 146 SS-GLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAV 201
Query: 356 RDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPT-AVSISSILP 414
+AR++F++MP + + SW +MI GY + G E L S GL+ +V++ S+L
Sbjct: 202 GNARILFDEMPVRDMGSWNAMISGYCQSGN-AKEALTL-----SNGLRAMDSVTVVSLLS 255
Query: 415 ACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTIS 474
AC G IH Y +++G+E ++ VSN +ID+Y + G + VF M +D IS
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS 315
Query: 475 WSMMIFGCSLHGQGKLGVDLFRQLERNSEAP 505
W+ +I L+ Q + LF+++ + P
Sbjct: 316 WNSIIKAYELNEQPLRAISLFQEMRLSRIQP 346
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 10/210 (4%)
Query: 319 SLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIR 378
+L+ + +H LV + +V +S L+ +Y G AR F+ + ++ V +W MI
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 379 GYVKKGGFNNEVFRLFRK-MNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGV 437
GY + G ++EV R F M S GL P + S+L AC + G +IH L+ G
Sbjct: 126 GYGRAGN-SSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGF 181
Query: 438 EFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQ 497
+D+ V+ ++I +Y + A+ A +F EM +D SW+ MI G G K + L
Sbjct: 182 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL--- 238
Query: 498 LERNSEAPLDDNIYAAALHACSTARMFEEG 527
N +D + L AC+ A F G
Sbjct: 239 --SNGLRAMDSVTVVSLLSACTEAGDFNRG 266
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 237/758 (31%), Positives = 366/758 (48%), Gaps = 55/758 (7%)
Query: 68 WNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAADFSLGKQLHTHAV 127
WN+LI ++ N + F M + A + G+ H ++
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154
Query: 128 KLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALE 187
S AL+ +Y+ ++ A+ +FD+ + + W + + Y G P+ ALE
Sbjct: 155 VTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALE 214
Query: 188 LFHRMVXXXXXXXXXXXXXXXXXX-XMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMY 246
+F RM +G+ G+ +H AV + +F N L+ MY
Sbjct: 215 MFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMY 274
Query: 247 VDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGL-------- 298
CG M +A VF M KDVVSW +M+ G Q G +A+ LF +M E +
Sbjct: 275 AKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWS 334
Query: 299 -------------------------SVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVR- 332
+KP+ V + +VL C +G+L HG+EIH Y ++
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKY 394
Query: 333 ------NGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK--TVVSWTSMIRGYVKKG 384
NG + ++ N L+ MYA C AR +F+ + K VV+WT MI GY + G
Sbjct: 395 PIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHG 454
Query: 385 GFNNEVFRLFRKMNSEG--LKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVE-FDI 441
N+ L +M E +P A +IS L AC +A+ + G++IH Y LRN +
Sbjct: 455 D-ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPL 513
Query: 442 NVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERN 501
VSN +IDMY K G+I+ A VF M K+ ++W+ ++ G +HG G+ + +F ++ R
Sbjct: 514 FVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRI 573
Query: 502 SEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR-----GPMIAHCAQKVSLLARCGLFD 556
LD L+ACS + M ++G FN ++ P H A V LL R G +
Sbjct: 574 G-FKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLN 632
Query: 557 EAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHA 616
A+ I E +E P V L CRIHG+ LG+ E++ EL + +Y LL N +A
Sbjct: 633 AALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYA 692
Query: 617 GKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFME 676
G+ V +IR +R +G+K + C+W + F GD +HP KEI L M+
Sbjct: 693 NAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQ 752
Query: 677 EMRTEGVEPKWDFSLHDV-DEERECTQIEHSELLALAFGLISS-QAGPIRLEKNSRVCRG 734
++ G P+ F+LHDV DEE++ EHSE LALA+G++++ Q IR+ KN RVC
Sbjct: 753 RIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGD 812
Query: 735 CHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
CH ++S++ +IIL+D + FHHFK+G C+C+ +W
Sbjct: 813 CHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 143/507 (28%), Positives = 233/507 (45%), Gaps = 63/507 (12%)
Query: 141 LIHLYASLDDIAVAQTLFDKTAP--FGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXX 198
LI Y S+ ++ A +L + P G W L + Y G L LF M
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 199 XXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLV 258
+ S+R G H +++ G VF N+L+ MY C S+ DAR V
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 259 FEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIG 318
F++M DVVSW S+I + G+ A+E+F RM E +PD + + VLP C +G
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNE-FGCRPDNITLVNVLPPCASLG 243
Query: 319 SLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIR 378
+ G+++H + V + + ++ + N L+ MYA CG +A VF M K VVSW +M+
Sbjct: 244 THSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVA 303
Query: 379 GYVKKGGFNNEVFRLFRKMNSE-----------------------------------GLK 403
GY + G F + V RLF KM E G+K
Sbjct: 304 GYSQIGRFEDAV-RLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362
Query: 404 PTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDIN-------VSNAVIDMYVKSGA 456
P V++ S+L C + + HG+EIH Y ++ ++ N V N +IDMY K
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKK 422
Query: 457 IACALNVFGEMN--EKDTISWSMMIFGCSLHGQGKLGVDLFRQL-ERNSEAPLDDNIYAA 513
+ A +F ++ E+D ++W++MI G S HG ++L ++ E + + + +
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISC 482
Query: 514 ALHACSTARMFEEGRVCFNH-IRG-----PM-IAHCAQKVSLLARCGLFDEA-MVFIREQ 565
AL AC++ G+ + +R P+ +++C + + A+CG +A +VF +
Sbjct: 483 ALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCL--IDMYAKCGSISDARLVF--DN 538
Query: 566 KIEQHPEVLRKLLEGCRIH--GEYALG 590
+ ++ L+ G +H GE ALG
Sbjct: 539 MMAKNEVTWTSLMTGYGMHGYGEEALG 565
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 160/319 (50%), Gaps = 8/319 (2%)
Query: 239 SNSLLKMYVDCGSMRDARLVFEKMPCKD--VVSWTSMIRGCVQNGELSEAMELFRRMNLE 296
++ L+ Y+ G + A + + P D V W S+IR NG ++ + LF M+
Sbjct: 62 TSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMH-- 119
Query: 297 GLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASR 356
LS PD V CG I S++ G H + G +V + N L+ MY+ C +
Sbjct: 120 SLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLS 179
Query: 357 DARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSE-GLKPTAVSISSILPA 415
DAR VF++M VVSW S+I Y K G +F +M +E G +P +++ ++LP
Sbjct: 180 DARKVFDEMSVWDVVSWNSIIESYAKLGK-PKVALEMFSRMTNEFGCRPDNITLVNVLPP 238
Query: 416 CGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISW 475
C + +H G+++H + + + + ++ V N ++DMY K G + A VF M+ KD +SW
Sbjct: 239 CASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSW 298
Query: 476 SMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARM-FEEGRVCFNHI 534
+ M+ G S G+ + V LF +++ + +D ++AA+ + + +E VC +
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEKMQEE-KIKMDVVTWSAAISGYAQRGLGYEALGVCRQML 357
Query: 535 RGPMIAHCAQKVSLLARCG 553
+ + +S+L+ C
Sbjct: 358 SSGIKPNEVTLISVLSGCA 376
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 110/274 (40%), Gaps = 14/274 (5%)
Query: 64 DTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAADFSLGKQLH 123
D + W+ I + A+ QML + GK++H
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 388
Query: 124 THAVKLALSSRAH-------TLIALIHLYASLDDIAVAQTLFDKTAPFGSD--CWTFLAK 174
+A+K + R + + LI +YA + A+ +FD +P D WT +
Sbjct: 389 CYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 448
Query: 175 LYVLEGMPRSALELFHRMVXX--XXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL 232
Y G ALEL M + +LR G+ +H A++
Sbjct: 449 GYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQ 508
Query: 233 EG-EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFR 291
+F SN L+ MY CGS+ DARLVF+ M K+ V+WTS++ G +G EA+ +F
Sbjct: 509 NAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFD 568
Query: 292 RMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGRE 325
M G K D V + VL C G + G E
Sbjct: 569 EMRRIGF--KLDGVTLLVVLYACSHSGMIDQGME 600
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 12/241 (4%)
Query: 326 IHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKT--VVSWTSMIRGYVKK 383
IH L+ G+ + L++ L+ Y G A + + P V W S+IR Y
Sbjct: 47 IHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSY-GD 104
Query: 384 GGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINV 443
G N+ LF M+S P + + ACG I+S + G H L G ++ V
Sbjct: 105 NGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFV 164
Query: 444 SNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSE 503
NA++ MY + +++ A VF EM+ D +SW+ +I + G+ K+ +++F ++
Sbjct: 165 GNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFG 224
Query: 504 APLDDNIYAAALHACSTARMFEEGRV--CF----NHIRGPMIAHCAQKVSLLARCGLFDE 557
D+ L C++ G+ CF I+ + +C V + A+CG+ DE
Sbjct: 225 CRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCL--VDMYAKCGMMDE 282
Query: 558 A 558
A
Sbjct: 283 A 283
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 359 bits (922), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 227/747 (30%), Positives = 371/747 (49%), Gaps = 37/747 (4%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASR-- 111
++VFD+ E + ++WN+LI + S + +A+ F ML V A
Sbjct: 153 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 212
Query: 112 -LAADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCW- 169
+ +GKQ+H + ++ + + L+ +Y L +A ++ L W
Sbjct: 213 PMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWN 271
Query: 170 TFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVK 229
T L+ L E + ALE MV + LR G+++H A+K
Sbjct: 272 TVLSSLCQNEQL-LEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 330
Query: 230 LG-LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAME 288
G L+ F ++L+ MY +C + R VF+ M + + W +MI G QN EA+
Sbjct: 331 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALL 390
Query: 289 LFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKM 348
LF M E + + ++ V+P C G+ IHG++V+ G++ D + NTL+ M
Sbjct: 391 LFIGME-ESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDM 449
Query: 349 YADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSE-------- 400
Y+ G A +F +M + +V+W +MI GYV + + L + N E
Sbjct: 450 YSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGAS 509
Query: 401 --GLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIA 458
LKP ++++ +ILP+C +++ G+EIH Y ++N + D+ V +A++DMY K G +
Sbjct: 510 RVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQ 569
Query: 459 CALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHAC 518
+ VF ++ +K+ I+W+++I +HG G+ +DL R + P ++ + + AC
Sbjct: 570 MSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP-NEVTFISVFAAC 628
Query: 519 STARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEV 573
S + M +EG F ++ P H A V LL R G EA Q + P
Sbjct: 629 SHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAY-----QLMNMMPRD 683
Query: 574 LRK------LLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKI 627
K LL RIH +G+ + L +LEP A +YVLL N ++ G D ++
Sbjct: 684 FNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEV 743
Query: 628 RETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKW 687
R ++E+G++ + C+W + ++VH F GD SHP+ +++ L+ E MR EG P
Sbjct: 744 RRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDT 803
Query: 688 DFSLHDVDE-ERECTQIEHSELLALAFGLISSQAGP-IRLEKNSRVCRGCHDFAKFVSKV 745
LH+V+E E+E HSE LA+AFG++++ G IR+ KN RVC CH KF+SK+
Sbjct: 804 SCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKI 863
Query: 746 TGREIILKDPNFFHHFKHGHCTCEDFW 772
REIIL+D FH FK+G C+C D+W
Sbjct: 864 VDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 206/430 (47%), Gaps = 16/430 (3%)
Query: 59 KSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAADFSL 118
+SPEW W L+ + + +N A+ T+ M+ + A D L
Sbjct: 60 RSPEW----WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMEL 115
Query: 119 GKQLHTHAVKLALSSRAHTLI-ALIHLYASLDDIAVAQTLFDKTAPFGSDCW-TFLAKLY 176
GKQ+H H K + T+ L++LY D +FD+ + W + ++ L
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 175
Query: 177 VLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXX---XXMMGSLRQGRDVHLIAVKLGLE 233
E ALE F M+ M L G+ VH ++ G E
Sbjct: 176 SFEKW-EMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-E 233
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
F N+L+ MY G + ++++ +D+V+W +++ QN +L EA+E R M
Sbjct: 234 LNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREM 293
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNG-VECDVLLSNTLLKMYADC 352
LEG V+PD +S+VLP C + L+ G+E+H Y ++NG ++ + + + L+ MY +C
Sbjct: 294 VLEG--VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC 351
Query: 353 GASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKM-NSEGLKPTAVSISS 411
R VF+ M + + W +MI GY + + E LF M S GL + +++
Sbjct: 352 KQVLSGRRVFDGMFDRKIGLWNAMIAGY-SQNEHDKEALLLFIGMEESAGLLANSTTMAG 410
Query: 412 ILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKD 471
++PAC R + IHG++++ G++ D V N ++DMY + G I A+ +FG+M ++D
Sbjct: 411 VVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRD 470
Query: 472 TISWSMMIFG 481
++W+ MI G
Sbjct: 471 LVTWNTMITG 480
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 183/423 (43%), Gaps = 16/423 (3%)
Query: 112 LAADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVA----QTLFDKTAPFGSD 167
LA FSL + L S H + ++ +D+A A ++F + +
Sbjct: 5 LAFTFSLPSIFPFPSQLLPFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSR-SPE 63
Query: 168 CWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIA 227
W L + V + R A+ + M+ + + G+ +H
Sbjct: 64 WWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 228 VKLGLE-GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEA 286
K G V +N+L+ +Y CG VF+++ ++ VSW S+I + A
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 287 MELFRRMNLEGLSVKPDLVMVSTVLPVCG---MIGSLKHGREIHGYLVRNGVECDVLLSN 343
+E FR M E +V+P + +V+ C M L G+++H Y +R G E + + N
Sbjct: 184 LEAFRCMLDE--NVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIIN 240
Query: 344 TLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLK 403
TL+ MY G ++++ + +V+W +++ + E R+M EG++
Sbjct: 241 TLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL-LEALEYLREMVLEGVE 299
Query: 404 PTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDIN--VSNAVIDMYVKSGAIACAL 461
P +ISS+LPAC + + G+E+H Y L+NG D N V +A++DMY +
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNG-SLDENSFVGSALVDMYCNCKQVLSGR 358
Query: 462 NVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTA 521
VF M ++ W+ MI G S + K + LF +E ++ + A + AC +
Sbjct: 359 RVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRS 418
Query: 522 RMF 524
F
Sbjct: 419 GAF 421
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 127/263 (48%), Gaps = 9/263 (3%)
Query: 270 WTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGY 329
W ++R V++ L EA+ + M + L +KPD +L + ++ G++IH +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIV--LGIKPDNYAFPALLKAVADLQDMELGKQIHAH 122
Query: 330 LVRNGVECD-VLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNN 388
+ + G D V ++NTL+ +Y CG VF+++ + VSW S+I +
Sbjct: 123 VYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKW-E 181
Query: 389 EVFRLFRKMNSEGLKPTAVSISSILPACGRIASHK---HGREIHGYLLRNGVEFDINVSN 445
FR M E ++P++ ++ S++ AC + + G+++H Y LR G E + + N
Sbjct: 182 MALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIIN 240
Query: 446 AVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAP 505
++ MY K G +A + + G +D ++W+ ++ + Q ++ R++ P
Sbjct: 241 TLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 300
Query: 506 LDDNIYAAALHACSTARMFEEGR 528
D+ ++ L ACS M G+
Sbjct: 301 -DEFTISSVLPACSHLEMLRTGK 322
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 358 bits (919), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 210/665 (31%), Positives = 345/665 (51%), Gaps = 10/665 (1%)
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
A+ +GK++H VK S + L ++YA + A+ +FD+ W +
Sbjct: 149 AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIV 208
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
Y GM R ALE+ M + + G+++H A++ G +
Sbjct: 209 AGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD 268
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
V S +L+ MY CGS+ AR +F+ M ++VVSW SMI VQN EAM +F++M
Sbjct: 269 SLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM 328
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCG 353
EG VKP V V L C +G L+ GR IH V G++ +V + N+L+ MY C
Sbjct: 329 LDEG--VKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCK 386
Query: 354 ASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSIL 413
A +F ++ S+T+VSW +MI G+ + G + F +M S +KP + S++
Sbjct: 387 EVDTAASMFGKLQSRTLVSWNAMILGFAQNGR-PIDALNYFSQMRSRTVKPDTFTYVSVI 445
Query: 414 PACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTI 473
A ++ H + IHG ++R+ ++ ++ V+ A++DMY K GAI A +F M+E+
Sbjct: 446 TAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVT 505
Query: 474 SWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCF-- 531
+W+ MI G HG GK ++LF ++++ + P + + + + ACS + + E G CF
Sbjct: 506 TWNAMIDGYGTHGFGKAALELFEEMQKGTIKP-NGVTFLSVISACSHSGLVEAGLKCFYM 564
Query: 532 ---NHIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYA 588
N+ + H V LL R G +EA FI + ++ V +L C+IH
Sbjct: 565 MKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVN 624
Query: 589 LGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYR 648
++ E+L EL P + +VLL N + + V ++R ++ +GL+ C+ +
Sbjct: 625 FAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIK 684
Query: 649 EKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEERECTQIEHSEL 708
+VH F +G +HP K+I + L+ + ++ G P + L ++ +E HSE
Sbjct: 685 NEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLLSTHSEK 744
Query: 709 LALAFGLISSQAG-PIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCT 767
LA++FGL+++ AG I + KN RVC CH+ K++S VTGREI+++D FHHFK+G C+
Sbjct: 745 LAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACS 804
Query: 768 CEDFW 772
C D+W
Sbjct: 805 CGDYW 809
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 215/470 (45%), Gaps = 16/470 (3%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VFD+ PE D ++WNT++ + N +A+ M + A
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 250
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
S+GK++H +A++ S + AL+ +YA + A+ LFD W +
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMID 310
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
YV P+ A+ +F +M+ +G L +GR +H ++V+LGL+
Sbjct: 311 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR 370
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
V NSL+ MY C + A +F K+ + +VSW +MI G QNG +A+ F +M
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM- 429
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGA 354
+VKPD +V+ + H + IHG ++R+ ++ +V ++ L+ MYA CGA
Sbjct: 430 -RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGA 488
Query: 355 SRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILP 414
ARL+F+ M + V +W +MI GY GF LF +M +KP V+ S++
Sbjct: 489 IMIARLIFDMMSERHVTTWNAMIDGY-GTHGFGKAALELFEEMQKGTIKPNGVTFLSVIS 547
Query: 415 ACGRIASHKHGREIHGYLLRN-GVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTI 473
AC + G + + N +E ++ A++D+ ++G + A + +M K +
Sbjct: 548 ACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAV 607
Query: 474 S-WSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDD--------NIYAAA 514
+ + M+ C +H + ER E DD NIY AA
Sbjct: 608 NVYGAMLGACQIHKNVNFAE---KAAERLFELNPDDGGYHVLLANIYRAA 654
Score = 182 bits (461), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 172/313 (54%), Gaps = 4/313 (1%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIR 275
SL++ R + + K GL E F L+ ++ GS+ +A VFE + K V + +M++
Sbjct: 49 SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLK 108
Query: 276 GCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGV 335
G + +L +A++ F RM + V+P + + +L VCG L+ G+EIHG LV++G
Sbjct: 109 GFAKVSDLDKALQFFVRMRYD--DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF 166
Query: 336 ECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFR 395
D+ L MYA C +AR VF++MP + +VSW +++ GY + G + +
Sbjct: 167 SLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGY-SQNGMARMALEMVK 225
Query: 396 KMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSG 455
M E LKP+ ++I S+LPA + G+EIHGY +R+G + +N+S A++DMY K G
Sbjct: 226 SMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG 285
Query: 456 AIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAAL 515
++ A +F M E++ +SW+ MI + K + +F+++ P D ++ AL
Sbjct: 286 SLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV-MGAL 344
Query: 516 HACSTARMFEEGR 528
HAC+ E GR
Sbjct: 345 HACADLGDLERGR 357
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 356 bits (914), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 224/704 (31%), Positives = 337/704 (47%), Gaps = 73/704 (10%)
Query: 140 ALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXX 199
++ Y+ D+ FD+ S WT + Y G A+ + MV
Sbjct: 85 TVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEP 144
Query: 200 XXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVF 259
+ G+ VH VKLGL G V SNSLL MY CG A+ VF
Sbjct: 145 TQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVF 204
Query: 260 EKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM--------------------NLEGLS 299
++M +D+ SW +MI +Q G++ AM F +M +L L
Sbjct: 205 DRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALD 264
Query: 300 V----------KPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMY 349
+ PD +++VL C + L G++IH ++V G + ++ N L+ MY
Sbjct: 265 IFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMY 324
Query: 350 ADCGASRDARLVFEQ---------------------------------MPSKTVVSWTSM 376
+ CG AR + EQ + + VV+WT+M
Sbjct: 325 SRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAM 384
Query: 377 IRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNG 436
I GY + G + E LFR M G +P + +++++L +AS HG++IHG +++G
Sbjct: 385 IVGYEQHGSYG-EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG 443
Query: 437 VEFDINVSNAVIDMYVKSGAIACALNVFGEMN-EKDTISWSMMIFGCSLHGQGKLGVDLF 495
+ ++VSNA+I MY K+G I A F + E+DT+SW+ MI + HG + ++LF
Sbjct: 444 EIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELF 503
Query: 496 RQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLA 550
+ P D Y AC+ A + +GR F+ ++ P ++H A V L
Sbjct: 504 ETMLMEGLRP-DHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 562
Query: 551 RCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVL 610
R GL EA FI + IE LL CR+H LGK E+L LEP N+ Y
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSA 622
Query: 611 LLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSA 670
L N ++ GK + KIR+++++ +K ++ +W + KVHVFG D +HP K EI
Sbjct: 623 LANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMT 682
Query: 671 LQGFMEEMRTEGVEPKWDFSLHDVDEE-RECTQIEHSELLALAFGLISS-QAGPIRLEKN 728
++ +E++ G P LHD++EE +E HSE LA+AFGLIS+ +R+ KN
Sbjct: 683 MKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKN 742
Query: 729 SRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
RVC CH KF+SK+ GREII++D FHHFK G C+C D+W
Sbjct: 743 LRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 125/545 (22%), Positives = 218/545 (40%), Gaps = 81/545 (14%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+ FD+ P+ D+++W T+I + + + AI M++ + +
Sbjct: 101 EFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATR 160
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
GK++H+ VKL L +L+++YA D +A+ +FD+ W +
Sbjct: 161 CMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIA 220
Query: 175 LYV-------------------------------LEGMPRSALELFHRMVXXXXXXXXXX 203
L++ G AL++F +M+
Sbjct: 221 LHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRF 280
Query: 204 XXXXXXXX-XMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKM 262
+ L G+ +H V G + N+L+ MY CG + AR + E+
Sbjct: 281 TLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQR 340
Query: 263 PCK---------------------------------DVVSWTSMIRGCVQNGELSEAMEL 289
K DVV+WT+MI G Q+G EA+ L
Sbjct: 341 GTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINL 400
Query: 290 FRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMY 349
FR M G +P+ ++ +L V + SL HG++IHG V++G V +SN L+ MY
Sbjct: 401 FRSM--VGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMY 458
Query: 350 ADCGASRDARLVFEQMP-SKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVS 408
A G A F+ + + VSWTSMI + + G E LF M EGL+P ++
Sbjct: 459 AKAGNITSASRAFDLIRCERDTVSWTSMIIA-LAQHGHAEEALELFETMLMEGLRPDHIT 517
Query: 409 ISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSN--AVIDMYVKSGAIACALNVFGE 466
+ AC GR+ ++++ + +S+ ++D++ ++G + A +
Sbjct: 518 YVGVFSACTHAGLVNQGRQYFD-MMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEK 576
Query: 467 MN-EKDTISWSMMIFGCSLHGQ---GKLGVDLFRQLERNSEAPLDDNIYAAALHACSTAR 522
M E D ++W ++ C +H GK+ + LE P + Y+A + S
Sbjct: 577 MPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLE-----PENSGAYSALANLYSACG 631
Query: 523 MFEEG 527
+EE
Sbjct: 632 KWEEA 636
Score = 126 bits (317), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 158/379 (41%), Gaps = 99/379 (26%)
Query: 223 VHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPC------------------ 264
VH +K GL V+ N+L+ +Y G AR +F++MP
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 265 -------------KDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVL 311
+D VSWT+MI G G+ +A+ + M EG ++P ++ VL
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG--IEPTQFTLTNVL 153
Query: 312 PVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLV---------- 361
++ G+++H ++V+ G+ +V +SN+LL MYA CG A+ V
Sbjct: 154 ASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDIS 213
Query: 362 ---------------------FEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSE 400
FEQM + +V+W SMI G+ ++ G++ +F KM +
Sbjct: 214 SWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQR-GYDLRALDIFSKMLRD 272
Query: 401 G-LKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIAC 459
L P +++S+L AC + G++IH +++ G + V NA+I MY + G +
Sbjct: 273 SLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332
Query: 460 AL---------------------------------NVFGEMNEKDTISWSMMIFGCSLHG 486
A N+F + ++D ++W+ MI G HG
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHG 392
Query: 487 QGKLGVDLFRQLERNSEAP 505
++LFR + + P
Sbjct: 393 SYGEAINLFRSMVGGGQRP 411
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 148/338 (43%), Gaps = 66/338 (19%)
Query: 326 IHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKG- 384
+H ++++G+ V L N L+ +Y+ G + AR +F++MP +T SW +++ Y K+G
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 385 ------------------------GFNN-----EVFRLFRKMNSEGLKPTAVSISSILPA 415
G+ N + R+ M EG++PT +++++L +
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 416 CGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKS--------------------- 454
+ G+++H ++++ G+ +++VSN++++MY K
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 455 ----------GAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEA 504
G + A+ F +M E+D ++W+ MI G + G +D+F ++ R+S
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 505 PLDDNIYAAALHACSTARMFEEGRVCFNHI--RGPMIAHCAQK--VSLLARCGLFDEAMV 560
D A+ L AC+ G+ +HI G I+ +S+ +RCG + A
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 561 FIREQKIEQ-HPEVLRKLLEGCRIHGEYALGKQVIEQL 597
I ++ + E LL+G G+ K + L
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSL 373
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 353 bits (907), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 221/732 (30%), Positives = 361/732 (49%), Gaps = 18/732 (2%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRH----AVXXXXXXXXXXXXAS 110
Q+FD PE + ++WN++I N + +M+ A
Sbjct: 243 QLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 302
Query: 111 RLAADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWT 170
+ LGK +H AVKL L AL+ +Y+ I AQ +F W
Sbjct: 303 AREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWN 362
Query: 171 FLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMM--GSLRQGRDVHLIAV 228
+ + EG ++ +M+ L +++H ++
Sbjct: 363 TMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSL 422
Query: 229 KLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAME 288
K +N+ + Y CGS+ A+ VF + K V SW ++I G Q+ + +++
Sbjct: 423 KQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLD 482
Query: 289 LFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKM 348
+M + GL PD V ++L C + SL+ G+E+HG+++RN +E D+ + ++L +
Sbjct: 483 AHLQMKISGL--LPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 540
Query: 349 YADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVS 408
Y CG + +F+ M K++VSW ++I GY++ G F + +FR+M G++ +S
Sbjct: 541 YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNG-FPDRALGVFRQMVLYGIQLCGIS 599
Query: 409 ISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMN 468
+ + AC + S + GRE H Y L++ +E D ++ ++IDMY K+G+I + VF +
Sbjct: 600 MMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK 659
Query: 469 EKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGR 528
EK T SW+ MI G +HG K + LF +++R P DD + L AC+ + + EG
Sbjct: 660 EKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNP-DDLTFLGVLTACNHSGLIHEGL 718
Query: 529 VCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHP-EVLRKLLEGCR 582
+ ++ P + H A + +L R G D+A+ + E+ E+ + + LL CR
Sbjct: 719 RYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCR 778
Query: 583 IHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKAC 642
IH +G++V +L ELEP ENYVLL N +AG GK + V K+R+ + E L+ C
Sbjct: 779 IHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGC 838
Query: 643 TWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEERECTQ 702
+W KV F G+ +EI S ++ G P HD+ EE + Q
Sbjct: 839 SWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQ 898
Query: 703 IE-HSELLALAFGLI-SSQAGPIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHH 760
+ HSE LAL +GLI +S+ IR+ KN R+C CH+ AK +SKV REI+++D FHH
Sbjct: 899 LRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHH 958
Query: 761 FKHGHCTCEDFW 772
FK+G C+C D+W
Sbjct: 959 FKNGVCSCGDYW 970
Score = 172 bits (437), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 208/450 (46%), Gaps = 10/450 (2%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHA-VXXXXXXXXXXXXASRLAA 114
VFD + WN +I ++ N + + TF +M+ + A +
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
D +G +H VK L AL+ Y + + A LFD W + +
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQ----GRDVHLIAVKL 230
++ G + L M+ + + + G+ VH AVKL
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 321
Query: 231 GLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELF 290
L+ E+ +N+L+ MY CG + +A+++F+ K+VVSW +M+ G G+ ++
Sbjct: 322 RLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVL 381
Query: 291 RRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYA 350
R+M G VK D V + +PVC L +E+H Y ++ + L++N + YA
Sbjct: 382 RQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYA 441
Query: 351 DCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRL--FRKMNSEGLKPTAVS 408
CG+ A+ VF + SKTV SW ++I G+ + N+ L +M GL P + +
Sbjct: 442 KCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS---NDPRLSLDAHLQMKISGLLPDSFT 498
Query: 409 ISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMN 468
+ S+L AC ++ S + G+E+HG+++RN +E D+ V +V+ +Y+ G + +F M
Sbjct: 499 VCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAME 558
Query: 469 EKDTISWSMMIFGCSLHGQGKLGVDLFRQL 498
+K +SW+ +I G +G + +FRQ+
Sbjct: 559 DKSLVSWNTVITGYLQNGFPDRALGVFRQM 588
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 148/299 (49%), Gaps = 7/299 (2%)
Query: 217 LRQGRDVH-LIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIR 275
+ GR +H L++ L + ++ MY CGS D+R VF+ + K++ W ++I
Sbjct: 100 IEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVIS 159
Query: 276 GCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGV 335
+N E +E F M + + PD V+ C + + G +HG +V+ G+
Sbjct: 160 SYSRNELYDEVLETFIEM-ISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGL 218
Query: 336 ECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFR 395
DV + N L+ Y G DA +F+ MP + +VSW SMIR + GF+ E F L
Sbjct: 219 VEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF-SDNGFSEESFLLLG 277
Query: 396 KM---NSEG-LKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMY 451
+M N +G P ++ ++LP C R G+ +HG+ ++ ++ ++ ++NA++DMY
Sbjct: 278 EMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMY 337
Query: 452 VKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNI 510
K G I A +F N K+ +SW+ M+ G S G D+ RQ+ E D +
Sbjct: 338 SKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEV 396
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 310 VLPVCGMIGSLKHGREIHGYL-----VRNGVECDVLLSNTLLKMYADCGASRDARLVFEQ 364
+L G ++ GR+IH + +RN D +L ++ MYA CG+ D+R VF+
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRN----DDVLCTRIITMYAMCGSPDDSRFVFDA 145
Query: 365 MPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKM-NSEGLKPTAVSISSILPACGRIASHK 423
+ SK + W ++I Y + +EV F +M ++ L P + ++ AC ++
Sbjct: 146 LRSKNLFQWNAVISSY-SRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVG 204
Query: 424 HGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMI 479
G +HG +++ G+ D+ V NA++ Y G + AL +F M E++ +SW+ MI
Sbjct: 205 IGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMI 260
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 353 bits (906), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 202/565 (35%), Positives = 306/565 (54%), Gaps = 11/565 (1%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIR 275
+LR G+ VH +K + LL Y C + DAR V ++MP K+VVSWT+MI
Sbjct: 67 ALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMIS 126
Query: 276 GCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGV 335
Q G SEA+ +F M KP+ +TVL C L G++IHG +V+
Sbjct: 127 RYSQTGHSSEALTVFAEMMRS--DGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNY 184
Query: 336 ECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFR 395
+ + + ++LL MYA G ++AR +FE +P + VVS T++I GY + G + E +F
Sbjct: 185 DSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLG-LDEEALEMFH 243
Query: 396 KMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSG 455
+++SEG+ P V+ +S+L A +A HG++ H ++LR + F + N++IDMY K G
Sbjct: 244 RLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCG 303
Query: 456 AIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAAL 515
++ A +F M E+ ISW+ M+ G S HG G+ ++LFR + D A L
Sbjct: 304 NLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVL 363
Query: 516 HACSTARMFEEGRVCFNHIRG------PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQ 569
CS RM + G F+ + P H V +L R G DEA FI+ +
Sbjct: 364 SGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKP 423
Query: 570 HPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRE 629
VL LL CR+H +G+ V +L E+EP NA NYV+L N +A G+ V+ +R
Sbjct: 424 TAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRA 483
Query: 630 TIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDF 689
+ ++ + + +W + + +H F D +HPR++E+ + ++ +M+ G P
Sbjct: 484 MMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSC 543
Query: 690 SLHDVDEE-RECTQIEHSELLALAFGLISSQAG-PIRLEKNSRVCRGCHDFAKFVSKVTG 747
L+DVDEE +E + HSE LAL FGLI++ G PIR+ KN R+C CH+FAK SKV
Sbjct: 544 VLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFE 603
Query: 748 REIILKDPNFFHHFKHGHCTCEDFW 772
RE+ L+D N FH G C+C D+W
Sbjct: 604 REVSLRDKNRFHQIVDGICSCGDYW 628
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 168/418 (40%), Gaps = 39/418 (9%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+V D+ PE + ++W +I + H A++ F +M+R + A+
Sbjct: 108 KVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRAS 167
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
LGKQ+H VK S +L+ +YA I A+ +F+ T +
Sbjct: 168 GLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIA 227
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
Y G+ ALE+FHR+ + L G+ H ++ L
Sbjct: 228 GYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPF 287
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
NSL+ MY CG++ AR +F+ MP + +SW +M+ G ++G E +ELFR M
Sbjct: 288 YAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMR 347
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGA 354
E VKPD V + VL C HGR + +T L ++
Sbjct: 348 DEK-RVKPDAVTLLAVLSGC------SHGR----------------MEDTGLNIFDG--- 381
Query: 355 SRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILP 414
+V + +K I + + G +E F ++M S KPTA + S+L
Sbjct: 382 -----MVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPS---KPTAGVLGSLLG 433
Query: 415 ACGRIASHKHGREIHGYLLRNGVEFDINVSNAVI--DMYVKSGAIACALNVFGEMNEK 470
AC S G + L+ E N N VI ++Y +G A NV M +K
Sbjct: 434 ACRVHLSVDIGESVGRRLIEIEPE---NAGNYVILSNLYASAGRWADVNNVRAMMMQK 488
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 352 bits (903), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 220/729 (30%), Positives = 351/729 (48%), Gaps = 18/729 (2%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
+VFD+ E + + W TLI + N+ ++ F +M
Sbjct: 148 RKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEE 207
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
G Q+HT VK L +LI+LY ++ A+ LFDKT W +
Sbjct: 208 GVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMI 267
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
Y G+ AL +F+ M + LR +H VK G
Sbjct: 268 SGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFL 327
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPC-KDVVSWTSMIRGCVQNGELSEAMELFRR 292
+ +L+ Y C +M DA +F+++ C +VVSWT+MI G +QN EA++LF
Sbjct: 328 FDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSE 387
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADC 352
M +G V+P+ S +L +I E+H +V+ E + LL Y
Sbjct: 388 MKRKG--VRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKL 441
Query: 353 GASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSI 412
G +A VF + K +V+W++M+ GY + G ++F ++ G+KP + SSI
Sbjct: 442 GKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE-TEAAIKMFGELTKGGIKPNEFTFSSI 500
Query: 413 LPACGRI-ASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKD 471
L C AS G++ HG+ +++ ++ + VS+A++ MY K G I A VF EKD
Sbjct: 501 LNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKD 560
Query: 472 TISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCF 531
+SW+ MI G + HGQ +D+F+++++ + +D + AC+ A + EEG F
Sbjct: 561 LVSWNSMISGYAQHGQAMKALDVFKEMKKR-KVKMDGVTFIGVFAACTHAGLVEEGEKYF 619
Query: 532 N-HIR----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGE 586
+ +R P H + V L +R G ++AM I + R +L CR+H +
Sbjct: 620 DIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKK 679
Query: 587 YALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTL 646
LG+ E++ ++P ++ YVLL N +A G K+R+ + ER +K + +W
Sbjct: 680 TELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIE 739
Query: 647 YREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEE-RECTQIEH 705
+ K + F GD SHP K +I L+ ++ G EP + L D+D+E +E +H
Sbjct: 740 VKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQH 799
Query: 706 SELLALAFGLISSQAG-PIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKH- 763
SE LA+AFGLI++ G P+ + KN RVC CH K ++K+ REI+++D N FHHF
Sbjct: 800 SERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSD 859
Query: 764 GHCTCEDFW 772
G C+C DFW
Sbjct: 860 GVCSCGDFW 868
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 213/467 (45%), Gaps = 9/467 (1%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
H +FDKSP D ++ +L+ + A F + R + S
Sbjct: 47 HNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATL 106
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
D G+QLH +K +L+ Y + + +FD+ WT L
Sbjct: 107 CDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLI 166
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
Y M L LF RM G +G VH + VK GL+
Sbjct: 167 SGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLD 226
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
+ SNSL+ +Y+ CG++R AR++F+K K VV+W SMI G NG EA+ +F M
Sbjct: 227 KTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM 286
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCG 353
L V+ ++V+ +C + L+ ++H +V+ G D + L+ Y+ C
Sbjct: 287 RLN--YVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT 344
Query: 354 ASRDARLVFEQMPS-KTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSI 412
A DA +F+++ VVSWT+MI G+++ G E LF +M +G++P + S I
Sbjct: 345 AMLDALRLFKEIGCVGNVVSWTAMISGFLQNDG-KEEAVDLFSEMKRKGVRPNEFTYSVI 403
Query: 413 LPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDT 472
L A I+ E+H +++ E V A++D YVK G + A VF +++KD
Sbjct: 404 LTALPVISPS----EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDI 459
Query: 473 ISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACS 519
++WS M+ G + G+ + + +F +L + P ++ +++ L+ C+
Sbjct: 460 VAWSAMLAGYAQTGETEAAIKMFGELTKGGIKP-NEFTFSSILNVCA 505
Score = 133 bits (334), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 155/290 (53%), Gaps = 10/290 (3%)
Query: 239 SNSLLKMYVDC-GSMRDARL-----VFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
+N + ++ + C G++ +RL +F+K P +D S+ S++ G ++G EA LF
Sbjct: 24 ANGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLF-- 81
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADC 352
+N+ L ++ D + S+VL V + GR++H ++ G DV + +L+ Y
Sbjct: 82 LNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKG 141
Query: 353 GASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSI 412
+D R VF++M + VV+WT++I GY + N+EV LF +M +EG +P + + ++
Sbjct: 142 SNFKDGRKVFDEMKERNVVTWTTLISGYA-RNSMNDEVLTLFMRMQNEGTQPNSFTFAAA 200
Query: 413 LPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDT 472
L G ++H +++NG++ I VSN++I++Y+K G + A +F + K
Sbjct: 201 LGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSV 260
Query: 473 ISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTAR 522
++W+ MI G + +G + +F + N L ++ +A+ + C+ +
Sbjct: 261 VTWNSMISGYAANGLDLEALGMFYSMRLNY-VRLSESSFASVIKLCANLK 309
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 349 bits (896), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 219/696 (31%), Positives = 348/696 (50%), Gaps = 47/696 (6%)
Query: 120 KQLHTHAVKLALSSRAHTLIALIHLYA--SLDDIAVAQTLFDKTAPFGSDCWTFLAKLYV 177
KQ H H ++ S ++ L + A S + A+ +FD+ S W L + Y
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106
Query: 178 LEGMPRSALELFHRMVXXXX-XXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEV 236
P ++ F MV + SL G+ +H +AVK + +V
Sbjct: 107 SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDV 166
Query: 237 FASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLE 296
F +NSL+ Y CG + A VF + KDVVSW SMI G VQ G +A+ELF++M E
Sbjct: 167 FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKM--E 224
Query: 297 GLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASR 356
VK V + VL C I +L+ GR++ Y+ N V ++ L+N +L MY CG+
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 357 DARLVFE-------------------------------QMPSKTVVSWTSMIRGYVKKGG 385
DA+ +F+ MP K +V+W ++I Y ++ G
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAY-EQNG 343
Query: 386 FNNEVFRLFRKMN-SEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVS 444
NE +F ++ + +K +++ S L AC ++ + + GR IH Y+ ++G+ + +V+
Sbjct: 344 KPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVT 403
Query: 445 NAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEA 504
+A+I MY K G + + VF + ++D WS MI G ++HG G VD+F +++ +
Sbjct: 404 SALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVK 463
Query: 505 PLDDNIYAAALHACSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAM 559
P + + ACS + +E F+ + P H A V +L R G ++A+
Sbjct: 464 P-NGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAV 522
Query: 560 VFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKG 619
FI I V LL C+IH L + +L ELEP N +VLL N +A G
Sbjct: 523 KFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLG 582
Query: 620 KLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMR 679
K + V ++R+ +R GLK + C+ +H F +GD +HP +++ L ME+++
Sbjct: 583 KWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLK 642
Query: 680 TEGVEPKWDFSLHDVDEE--RECTQIEHSELLALAFGLISSQAGP-IRLEKNSRVCRGCH 736
+ G EP+ L ++EE +E + HSE LA+ +GLIS++A IR+ KN RVC CH
Sbjct: 643 SNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCH 702
Query: 737 DFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
AK +S++ REII++D FHHF++G C+C DFW
Sbjct: 703 SVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 218/497 (43%), Gaps = 41/497 (8%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHA-VXXXXXXXXXXXXASRLA 113
+VFD+ P+ ++ AWNTLI + S L+I F M+ + A+
Sbjct: 85 KVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEV 144
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
+ SLG+ LH AVK A+ S +LIH Y S D+ A +F W +
Sbjct: 145 SSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMI 204
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
+V +G P ALELF +M + +L GR V + +
Sbjct: 205 NGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVN 264
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFE-------------------------------KM 262
+ +N++L MY CGS+ DA+ +F+ M
Sbjct: 265 VNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSM 324
Query: 263 PCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKH 322
P KD+V+W ++I QNG+ +EA+ +F + L+ ++K + + + + L C +G+L+
Sbjct: 325 PQKDIVAWNALISAYEQNGKPNEALIVFHELQLQK-NMKLNQITLVSTLSACAQVGALEL 383
Query: 323 GREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVK 382
GR IH Y+ ++G+ + +++ L+ MY+ CG +R VF + + V W++MI G +
Sbjct: 384 GRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGG-LA 442
Query: 383 KGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRN-GVEFDI 441
G NE +F KM +KP V+ +++ AC + + N G+ +
Sbjct: 443 MHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEE 502
Query: 442 NVSNAVIDMYVKSGAIACALNVFGEMNEKDTIS-WSMMIFGCSLHGQGKLG-VDLFRQLE 499
++D+ +SG + A+ M + S W ++ C +H L + R LE
Sbjct: 503 KHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLE 562
Query: 500 ---RNSEA-PLDDNIYA 512
RN A L NIYA
Sbjct: 563 LEPRNDGAHVLLSNIYA 579
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 208/450 (46%), Gaps = 46/450 (10%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYV--DCGSMRDARLVFEKMPCKDVVSWTSM 273
SLRQ + H ++ G + ++++ L M S+ AR VF+++P + +W ++
Sbjct: 42 SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTL 101
Query: 274 IRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN 333
IR + ++ F M E P+ ++ + SL G+ +HG V++
Sbjct: 102 IRAYASGPDPVLSIWAFLDMVSES-QCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKS 160
Query: 334 GVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRL 393
V DV ++N+L+ Y CG A VF + K VVSW SMI G+V+KG ++ L
Sbjct: 161 AVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS-PDKALEL 219
Query: 394 FRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVK 453
F+KM SE +K + V++ +L AC +I + + GR++ Y+ N V ++ ++NA++DMY K
Sbjct: 220 FKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTK 279
Query: 454 SGAIACALNVFGEMNEKDTISWSMMIFGCSL----------------------------- 484
G+I A +F M EKD ++W+ M+ G ++
Sbjct: 280 CGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAY 339
Query: 485 --HGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG---PMI 539
+G+ + +F +L+ L+ + L AC+ E GR ++I+ M
Sbjct: 340 EQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMN 399
Query: 540 AHCAQK-VSLLARCGLFDEAM-VFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQL 597
H + + ++CG +++ VF +K + V ++ G +HG G + ++
Sbjct: 400 FHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF--VWSAMIGGLAMHG---CGNEAVDMF 454
Query: 598 CELEPLNAE-NYVLLLNWHAGKGKLDMVDK 626
+++ N + N V N +VD+
Sbjct: 455 YKMQEANVKPNGVTFTNVFCACSHTGLVDE 484
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 348 bits (892), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 217/672 (32%), Positives = 338/672 (50%), Gaps = 53/672 (7%)
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
D + +H+ + L + + L+ YASL D+A A+ +FD+ + +
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
YV G +++F M G++ GR +H A K+GL
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
+F N L+ MY CG + +ARLV ++M +DVVSW S++ G QN +A+E+ R M
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM- 232
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLK--MYADC 352
E + + D ++++LP +SNT + MY
Sbjct: 233 -ESVKISHDAGTMASLLPA---------------------------VSNTTTENVMYV-- 262
Query: 353 GASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSI 412
+ +F +M K++VSW MI Y+K E L+ +M ++G +P AVSI+S+
Sbjct: 263 ------KDMFFKMGKKSLVSWNVMIGVYMK-NAMPVEAVELYSRMEADGFEPDAVSITSV 315
Query: 413 LPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDT 472
LPACG ++ G++IHGY+ R + ++ + NA+IDMY K G + A +VF M +D
Sbjct: 316 LPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV 375
Query: 473 ISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCF- 531
+SW+ MI G+G V LF +L+ + P D + L ACS A + EEGR CF
Sbjct: 376 VSWTAMISAYGFSGRGCDAVALFSKLQDSGLVP-DSIAFVTTLAACSHAGLLEEGRSCFK 434
Query: 532 ---NHIR-GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEY 587
+H + P + H A V LL R G EA FI++ +E + V LL CR+H +
Sbjct: 435 LMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDT 494
Query: 588 ALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLY 647
+G ++L +L P + YVLL N +A G+ + V IR ++ +GLK +
Sbjct: 495 DIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEV 554
Query: 648 REKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEERECTQIE-HS 706
+H F GD SHP+ EI L +++M+ G P + +LHDV+EE + T + HS
Sbjct: 555 NRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHS 614
Query: 707 ELLALAFGLISSQA------GPIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHH 760
E LA+ F L++++ IR+ KN R+C CH AK +S++T REII++D N FH
Sbjct: 615 EKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHV 674
Query: 761 FKHGHCTCEDFW 772
F+ G C+C D+W
Sbjct: 675 FRFGVCSCGDYW 686
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 348 bits (892), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 209/670 (31%), Positives = 330/670 (49%), Gaps = 42/670 (6%)
Query: 141 LIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXX-XXXX 199
L+ Y+ I+ ++ F+K W L + Y L G+ +A++ ++ M+
Sbjct: 78 LLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANL 137
Query: 200 XXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVF 259
G + G+ +H +KLG E + + LL MY + G + DA+ VF
Sbjct: 138 TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVF 197
Query: 260 EKM----------------PC--------------KDVVSWTSMIRGCVQNGELSEAMEL 289
+ C KD VSW +MI+G QNG EA+E
Sbjct: 198 YGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIEC 257
Query: 290 FRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMY 349
FR M ++GL K D +VLP CG +G++ G++IH ++R + + + + L+ MY
Sbjct: 258 FREMKVQGL--KMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY 315
Query: 350 ADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSI 409
C A+ VF++M K VVSWT+M+ GY + G E ++F M G+ P ++
Sbjct: 316 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGY-GQTGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 410 SSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNE 469
+ AC ++S + G + HG + +G+ + VSN+++ +Y K G I + +F EMN
Sbjct: 375 GQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV 434
Query: 470 KDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRV 529
+D +SW+ M+ + G+ + LF ++ ++ P D + ACS A + E+G+
Sbjct: 435 RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKP-DGVTLTGVISACSRAGLVEKGQR 493
Query: 530 CFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIH 584
F + P I H + + L +R G +EAM FI LL CR
Sbjct: 494 YFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNK 553
Query: 585 GEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTW 644
G +GK E L EL+P + Y LL + +A KGK D V ++R +RE+ +K + +W
Sbjct: 554 GNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSW 613
Query: 645 TLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEERECTQIE 704
++ K+H F D S P +I + L+ ++ G +P F HDV+E + +
Sbjct: 614 IKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLN 673
Query: 705 -HSELLALAFGLISSQAG-PIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFK 762
HSE LA+AFGLI +G PIR+ KN RVC CH+ K +S VTGREI+++D FH FK
Sbjct: 674 YHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFK 733
Query: 763 HGHCTCEDFW 772
G C+C DFW
Sbjct: 734 DGTCSCGDFW 743
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 167/367 (45%), Gaps = 37/367 (10%)
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
+F+ N+LL Y G + + FEK+P +D V+W +I G +G + A++ + M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM- 129
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGA 354
+ S V + T+L + G + G++IHG +++ G E +L+ + LL MYA+ G
Sbjct: 130 MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 355 SRDARLVFEQMPSKTV------------------------------VSWTSMIRGYVKKG 384
DA+ VF + + VSW +MI+G + +
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKG-LAQN 248
Query: 385 GFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVS 444
G E FR+M +GLK S+LPACG + + G++IH ++R + I V
Sbjct: 249 GLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG 308
Query: 445 NAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEA 504
+A+IDMY K + A VF M +K+ +SW+ M+ G G+ + V +F ++R+
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 505 PLDDNIYAAALHACSTARMFEEGRVCFNHIRGPMIAHCA----QKVSLLARCGLFDEAMV 560
P D A+ AC+ EEG + H V+L +CG D++
Sbjct: 369 P-DHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTR 427
Query: 561 FIREQKI 567
E +
Sbjct: 428 LFNEMNV 434
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 137/332 (41%), Gaps = 5/332 (1%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
Q+F + E D+++W +I N AI F +M + A
Sbjct: 226 QLF-RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLG 284
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
+ GKQ+H ++ + ALI +Y + A+T+FD+ WT +
Sbjct: 285 AINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVV 344
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
Y G A+++F M + SL +G H A+ GL
Sbjct: 345 GYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIH 404
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
V SNSL+ +Y CG + D+ +F +M +D VSWT+M+ Q G E ++LF +M
Sbjct: 405 YVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMV 464
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN-GVECDVLLSNTLLKMYADCG 353
GL KPD V ++ V+ C G ++ G+ + G+ + + ++ +++ G
Sbjct: 465 QHGL--KPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSG 522
Query: 354 ASRDARLVFEQMP-SKTVVSWTSMIRGYVKKG 384
+A MP + WT+++ KG
Sbjct: 523 RLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 149/348 (42%), Gaps = 59/348 (16%)
Query: 343 NTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGL 402
N LL Y+ G + FE++P + V+W +I GY G V M
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135
Query: 403 KPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALN 462
T V++ ++L G++IHG +++ G E + V + ++ MY G I+ A
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195
Query: 463 VFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTAR 522
VF +++++T+ ++ ++ G G + + LFR +E++S + +AA + +
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVS------WAAMIKGLAQNG 249
Query: 523 MFEEGRVCFNHIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCR 582
+ +E CF ++ ++ K++Q+P +L C
Sbjct: 250 LAKEAIECFREMK--------------------------VQGLKMDQYP--FGSVLPACG 281
Query: 583 IHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIR-----ETIRERGLK 637
G GKQ+ C + N ++++ + G +DM K + +T+ +R +K
Sbjct: 282 GLGAINEGKQI--HACIIRT-NFQDHI-----YVGSALIDMYCKCKCLHYAKTVFDR-MK 332
Query: 638 PKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEP 685
K +WT V G G R +E A++ F+ +M+ G++P
Sbjct: 333 QKNVVSWT-----AMVVGYGQTG--RAEE---AVKIFL-DMQRSGIDP 369
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/230 (19%), Positives = 83/230 (36%), Gaps = 2/230 (0%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAAD 115
VFD+ + + ++W ++ + A+ F M R + A +
Sbjct: 327 VFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSS 386
Query: 116 FSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKL 175
G Q H A+ L +L+ LY DI + LF++ + WT +
Sbjct: 387 LEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSA 446
Query: 176 YVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQG-RDVHLIAVKLGLEG 234
Y G ++LF +MV G + +G R L+ + G+
Sbjct: 447 YAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVP 506
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPC-KDVVSWTSMIRGCVQNGEL 283
+ + ++ ++ G + +A MP D + WT+++ C G L
Sbjct: 507 SIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNL 556
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 347 bits (890), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 211/666 (31%), Positives = 328/666 (49%), Gaps = 15/666 (2%)
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
D G+ +H AV S ++ +Y + A+ +FD+ + W +
Sbjct: 134 DDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMIS 193
Query: 175 LYVLEGMPRSALELFHRMVXXX-XXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
Y M ++++F ++ + LR G +H +A K G
Sbjct: 194 GYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCY 253
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
+ + +Y CG ++ +F + D+V++ +MI G NGE ++ LF+ +
Sbjct: 254 SHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKEL 313
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCG 353
L G ++ ST++ + + G L IHGY +++ +S L +Y+
Sbjct: 314 MLSGARLRS-----STLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLN 368
Query: 354 ASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSIL 413
AR +F++ P K++ SW +MI GY + G + LFR+M P V+I+ IL
Sbjct: 369 EIESARKLFDESPEKSLPSWNAMISGYTQNG-LTEDAISLFREMQKSEFSPNPVTITCIL 427
Query: 414 PACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTI 473
AC ++ + G+ +H + E I VS A+I MY K G+IA A +F M +K+ +
Sbjct: 428 SACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEV 487
Query: 474 SWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFN- 532
+W+ MI G LHGQG+ +++F ++ + P + L+ACS A + +EG FN
Sbjct: 488 TWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVT-FLCVLYACSHAGLVKEGDEIFNS 546
Query: 533 --HIRG--PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYA 588
H G P + H A V +L R G A+ FI IE V LL CRIH +
Sbjct: 547 MIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTN 606
Query: 589 LGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYR 648
L + V E+L EL+P N +VLL N H+ +R+T ++R L T
Sbjct: 607 LARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIG 666
Query: 649 EKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDV-DEERECTQIEHSE 707
E HVF +GD SHP+ KEI L+ +MR G +P+ + +LHDV +EERE HSE
Sbjct: 667 ETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSE 726
Query: 708 LLALAFGLISSQAGP-IRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHC 766
LA+AFGLI+++ G IR+ KN RVC CH K +SK+T R I+++D N FHHFK G C
Sbjct: 727 RLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVC 786
Query: 767 TCEDFW 772
+C D+W
Sbjct: 787 SCGDYW 792
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 188/440 (42%), Gaps = 9/440 (2%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHA-VXXXXXXXXXXXXASRLA 113
+VFD+ PE DT+ WNT+I + N + +I F ++ + A
Sbjct: 175 KVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAEL 234
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
+ LG Q+H+ A K S + L I LY+ I + LF + + +
Sbjct: 235 QELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMI 294
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
Y G +L LF ++ + G L +H +K
Sbjct: 295 HGYTSNGETELSLSLFKELM---LSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFL 351
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
S +L +Y + AR +F++ P K + SW +MI G QNG +A+ LFR M
Sbjct: 352 SHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM 411
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCG 353
S P+ V ++ +L C +G+L G+ +H + E + +S L+ MYA CG
Sbjct: 412 QKSEFS--PNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCG 469
Query: 354 ASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSIL 413
+ +AR +F+ M K V+W +MI GY G E +F +M + G+ PT V+ +L
Sbjct: 470 SIAEARRLFDLMTKKNEVTWNTMISGYGLHGQ-GQEALNIFYEMLNSGITPTPVTFLCVL 528
Query: 414 PACGRIASHKHGREIHGYLL-RNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMN-EKD 471
AC K G EI ++ R G E + ++D+ ++G + AL M+ E
Sbjct: 529 YACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPG 588
Query: 472 TISWSMMIFGCSLHGQGKLG 491
+ W ++ C +H L
Sbjct: 589 SSVWETLLGACRIHKDTNLA 608
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 167/398 (41%), Gaps = 37/398 (9%)
Query: 231 GLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELF 290
G ++ L + D G++ AR +F + DV + ++RG N ++ +F
Sbjct: 47 GFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVF 106
Query: 291 RRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYA 350
+ + +KP+ + + + GR IHG V +G + ++LL + ++KMY
Sbjct: 107 AHLR-KSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYF 165
Query: 351 DCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKM-NSEGLKPTAVSI 409
DAR VF++MP K + W +MI GY +K E ++FR + N + ++
Sbjct: 166 KFWRVEDARKVFDRMPEKDTILWNTMISGY-RKNEMYVESIQVFRDLINESCTRLDTTTL 224
Query: 410 SSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNE 469
ILPA + + G +IH + G V I +Y K G I +F E +
Sbjct: 225 LDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRK 284
Query: 470 KDTISWSMMIFGCSLHGQGKLGVDLFRQLERN----------SEAPLDDN---IYA---- 512
D ++++ MI G + +G+ +L + LF++L + S P+ + IYA
Sbjct: 285 PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGY 344
Query: 513 --------------AALHACSTARMFEEGRVCFNHIRGPMIAHCAQKVSLLARCGLFDEA 558
A S E R F+ + +S + GL ++A
Sbjct: 345 CLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDA 404
Query: 559 MVFIRE-QKIE--QHPEVLRKLLEGCRIHGEYALGKQV 593
+ RE QK E +P + +L C G +LGK V
Sbjct: 405 ISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWV 442
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 135/325 (41%), Gaps = 29/325 (8%)
Query: 289 LFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKM 348
L R ++ L+ +T L S+ H + H ++ +G D+ L L +
Sbjct: 2 LLRTVSSATAETTAALISKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQR 61
Query: 349 YADCGASRDARLVFEQMPSKTVVSWTSMIRGY-VKKGGFNN-EVFRLFRKMNSEGLKPTA 406
+D GA AR +F + V + ++RG+ V + ++ VF RK S LKP +
Sbjct: 62 LSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRK--STDLKPNS 119
Query: 407 VSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGE 466
+ + + A + GR IHG + +G + ++ + + ++ MY K + A VF
Sbjct: 120 STYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDR 179
Query: 467 MNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEE 526
M EKDTI W+ MI G + + +FR L S LD L A + +
Sbjct: 180 MPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRL 239
Query: 527 GRV---------CFNH---IRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVL 574
G C++H + G +SL ++CG RE + P+++
Sbjct: 240 GMQIHSLATKTGCYSHDYVLTG--------FISLYSKCGKIKMGSALFREFR---KPDIV 288
Query: 575 --RKLLEGCRIHGEYALGKQVIEQL 597
++ G +GE L + ++L
Sbjct: 289 AYNAMIHGYTSNGETELSLSLFKEL 313
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 345 bits (886), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 215/724 (29%), Positives = 343/724 (47%), Gaps = 11/724 (1%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAAD 115
+F + D + +NTLI+ + A+ F +M + A
Sbjct: 345 IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGT 404
Query: 116 FSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKL 175
G+QLH + KL +S AL++LYA DI A F +T W +
Sbjct: 405 LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVA 464
Query: 176 YVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGE 235
Y L R++ +F +M +G L G +H +K +
Sbjct: 465 YGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLN 524
Query: 236 VFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNL 295
+ + L+ MY G + A + + KDVVSWT+MI G Q +A+ FR+M
Sbjct: 525 AYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD 584
Query: 296 EGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGAS 355
G ++ D V ++ + C + +LK G++IH +G D+ N L+ +Y+ CG
Sbjct: 585 RG--IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKI 642
Query: 356 RDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPA 415
++ L FEQ + ++W +++ G+ ++ G N E R+F +MN EG+ + S + A
Sbjct: 643 EESYLAFEQTEAGDNIAWNALVSGF-QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA 701
Query: 416 CGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISW 475
A+ K G+++H + + G + + V NA+I MY K G+I+ A F E++ K+ +SW
Sbjct: 702 ASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSW 761
Query: 476 SMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR 535
+ +I S HG G +D F Q+ ++ P + L ACS + ++G F +
Sbjct: 762 NAIINAYSKHGFGSEALDSFDQMIHSNVRP-NHVTLVGVLSACSHIGLVDKGIAYFESMN 820
Query: 536 G-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALG 590
P H V +L R GL A FI+E I+ V R LL C +H +G
Sbjct: 821 SEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIG 880
Query: 591 KQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREK 650
+ L ELEP ++ YVLL N +A K D D R+ ++E+G+K + +W +
Sbjct: 881 EFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNS 940
Query: 651 VHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVD-EERECTQIEHSELL 709
+H F GD +HP EI Q + G L+++ E+++ HSE L
Sbjct: 941 IHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKL 1000
Query: 710 ALAFGLISSQAG-PIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTC 768
A++FGL+S A PI + KN RVC CH + KFVSKV+ REII++D FHHF+ G C+C
Sbjct: 1001 AISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSC 1060
Query: 769 EDFW 772
+D+W
Sbjct: 1061 KDYW 1064
Score = 184 bits (466), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/513 (25%), Positives = 224/513 (43%), Gaps = 13/513 (2%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VFD+ PE WN +I S N F +M+ V A R +
Sbjct: 141 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGS 200
Query: 115 -DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
F + +Q+H + L LI LY+ + +A+ +FD W +
Sbjct: 201 VAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMI 260
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
A+ LF M + SL G +H + +KLG
Sbjct: 261 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 320
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
+ + N+L+ +Y G++ A +F M +D V++ ++I G Q G +AMELF+RM
Sbjct: 321 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCG 353
+L+GL +PD +++++ C G+L G+++H Y + G + + LL +YA C
Sbjct: 381 HLDGL--EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA 438
Query: 354 ASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSIL 413
A F + + VV W M+ Y N FR+FR+M E + P + SIL
Sbjct: 439 DIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNS-FRIFRQMQIEEIVPNQYTYPSIL 497
Query: 414 PACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTI 473
C R+ + G +IH +++ + + V + +IDMY K G + A ++ KD +
Sbjct: 498 KTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVV 557
Query: 474 SWSMMIFGCSLHGQGKLGVDLFRQ-LERNSEAPLDDNIYAAALHACSTARMFEEG----- 527
SW+ MI G + + + FRQ L+R + D+ A+ AC+ + +EG
Sbjct: 558 SWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS--DEVGLTNAVSACAGLQALKEGQQIHA 615
Query: 528 RVCFNHIRGPMIAHCAQKVSLLARCGLFDEAMV 560
+ C + + A V+L +RCG +E+ +
Sbjct: 616 QACVSGFSSDLPFQNAL-VTLYSRCGKIEESYL 647
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 136/596 (22%), Positives = 248/596 (41%), Gaps = 21/596 (3%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VFD D +W +I N AI F M + A +
Sbjct: 243 RVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 302
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
+G+QLH +KL SS + AL+ LY L ++ A+ +F + + + L
Sbjct: 303 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLIN 362
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
G A+ELF RM G+L +G+ +H KLG
Sbjct: 363 GLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFAS 422
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
+LL +Y C + A F + ++VV W M+ +L + +FR+M
Sbjct: 423 NNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ 482
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGA 354
+E + P+ ++L C +G L+ G +IH +++ + + + + L+ MYA G
Sbjct: 483 IE--EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGK 540
Query: 355 SRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILP 414
A + + K VVSWT+MI GY + F+++ FR+M G++ V +++ +
Sbjct: 541 LDTAWDILIRFAGKDVVSWTTMIAGYTQY-NFDDKALTTFRQMLDRGIRSDEVGLTNAVS 599
Query: 415 ACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTIS 474
AC + + K G++IH +G D+ NA++ +Y + G I + F + D I+
Sbjct: 600 ACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIA 659
Query: 475 WSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDN--IYAAALHACSTARMFEEGR---- 528
W+ ++ G G + + +F ++ R +D+N + +A+ A S ++G+
Sbjct: 660 WNALVSGFQQSGNNEEALRVFVRMNREG---IDNNNFTFGSAVKAASETANMKQGKQVHA 716
Query: 529 VCFNHIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYA 588
V C +S+ A+CG +A +Q +E + + ++
Sbjct: 717 VITKTGYDSETEVCNALISMYAKCGSISDA----EKQFLEVSTKNEVSWNAIINAYSKHG 772
Query: 589 LGKQVIEQLCELEPLNAE-NYVLLLNWHAGKGKLDMVDK----IRETIRERGLKPK 639
G + ++ ++ N N+V L+ + + +VDK E GL PK
Sbjct: 773 FGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPK 828
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 135/471 (28%), Positives = 219/471 (46%), Gaps = 49/471 (10%)
Query: 215 GSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMI 274
GSL +GR +H +KLGL+ S L Y+ G + A VF++MP + + +W MI
Sbjct: 99 GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 158
Query: 275 RGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVC-GMIGSLKHGREIHGYLVRN 333
+ + E LF RM E +V P+ S VL C G + +IH ++
Sbjct: 159 KELASRNLIGEVFGLFVRMVSE--NVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQ 216
Query: 334 GVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRL 393
G+ ++ N L+ +Y+ G AR VF+ + K SW +MI G + K E RL
Sbjct: 217 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISG-LSKNECEAEAIRL 275
Query: 394 FRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVK 453
F M G+ PT + SS+L AC +I S + G ++HG +L+ G D V NA++ +Y
Sbjct: 276 FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFH 335
Query: 454 SGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAA 513
G + A ++F M+++D ++++ +I G S G G+ ++LF+++ + P D N A+
Sbjct: 336 LGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP-DSNTLAS 394
Query: 514 ALHACST-----------ARMFEEGRVCFNHIRGPMI---AHCAQKVS------------ 547
+ ACS A + G N I G ++ A CA +
Sbjct: 395 LVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVEN 454
Query: 548 ------LLARCGLFDE---AMVFIREQKIEQ---HPEVLRKLLEGCRIHGEYALGKQVIE 595
+L GL D+ + R+ +IE+ + +L+ C G+ LG+Q+
Sbjct: 455 VVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHS 514
Query: 596 QLCELE-PLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWT 645
Q+ + LNA +L++ +A GKLD I IR G K +WT
Sbjct: 515 QIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI--LIRFAG---KDVVSWT 560
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 198/451 (43%), Gaps = 21/451 (4%)
Query: 119 GKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVL 178
G++LH+ +KL L S L Y D+ A +FD+ W + K
Sbjct: 104 GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELAS 163
Query: 179 EGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQG-------RDVHLIAVKLG 231
+ LF RMV ++ + R G +H + G
Sbjct: 164 RNLIGEVFGLFVRMV------SENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQG 217
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFR 291
L N L+ +Y G + AR VF+ + KD SW +MI G +N +EA+ LF
Sbjct: 218 LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFC 277
Query: 292 RMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYAD 351
M + L + P S+VL C I SL+ G ++HG +++ G D + N L+ +Y
Sbjct: 278 DMYV--LGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFH 335
Query: 352 CGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISS 411
G A +F M + V++ ++I G + + G+ + LF++M+ +GL+P + +++S
Sbjct: 336 LGNLISAEHIFSNMSQRDAVTYNTLING-LSQCGYGEKAMELFKRMHLDGLEPDSNTLAS 394
Query: 412 ILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKD 471
++ AC + G+++H Y + G + + A++++Y K I AL+ F E ++
Sbjct: 395 LVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVEN 454
Query: 472 TISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCF 531
+ W++M+ L + +FRQ++ P + Y + L C E G
Sbjct: 455 VVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP-NQYTYPSILKTCIRLGDLELGEQIH 513
Query: 532 NHI---RGPMIAH-CAQKVSLLARCGLFDEA 558
+ I + A+ C+ + + A+ G D A
Sbjct: 514 SQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA 544
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 345 bits (884), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 221/694 (31%), Positives = 342/694 (49%), Gaps = 47/694 (6%)
Query: 122 LHTHAVKLALSSRAHTLIALIH---LYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVL 178
+H +K+ L + + L LI L + + A ++F W + + + L
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 179 EGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFA 238
P SAL+L+ M+ + ++G+ +H +KLG + +++
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171
Query: 239 SNSLLKMYVDCGSMRDARLVFEK-------------------------------MPCKDV 267
SL+ MYV G + DA VF+K +P KDV
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231
Query: 268 VSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIH 327
VSW +MI G + G EA+ELF+ M +V+PD + TV+ C GS++ GR++H
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDM--MKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 328 GYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFN 387
++ +G ++ + N L+ +Y+ CG A +FE++P K V+SW ++I GY +
Sbjct: 290 LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYK 349
Query: 388 NEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLR--NGVEFDINVSN 445
E LF++M G P V++ SILPAC + + GR IH Y+ + GV ++
Sbjct: 350 -EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT 408
Query: 446 AVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAP 505
++IDMY K G I A VF + K SW+ MIFG ++HG+ DLF ++ + P
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQP 468
Query: 506 LDDNIYAAALHACSTARMFEEGRVCF-----NHIRGPMIAHCAQKVSLLARCGLFDEAMV 560
DD + L ACS + M + GR F ++ P + H + LL GLF EA
Sbjct: 469 -DDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE 527
Query: 561 FIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGK 620
I ++E + LL+ C++HG LG+ E L ++EP N +YVLL N +A G+
Sbjct: 528 MINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGR 587
Query: 621 LDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRT 680
+ V K R + ++G+K C+ VH F GD HPR +EI L+ +
Sbjct: 588 WNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 647
Query: 681 EGVEPKWDFSLHDVDEE-RECTQIEHSELLALAFGLISSQAGP-IRLEKNSRVCRGCHDF 738
G P L +++EE +E HSE LA+AFGLIS++ G + + KN RVCR CH+
Sbjct: 648 AGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEA 707
Query: 739 AKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
K +SK+ REII +D FHHF+ G C+C D+W
Sbjct: 708 TKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 167/346 (48%), Gaps = 36/346 (10%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYV---DCGSMRDARLVFEKMPCKDVVSWTS 272
+L+ R +H +K+GL +A + L++ + + A VF+ + +++ W +
Sbjct: 45 TLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNT 104
Query: 273 MIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVR 332
M RG + + A++L+ M GL P+ VL C + K G++IHG++++
Sbjct: 105 MFRGHALSSDPVSALKLYVCMISLGL--LPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLK 162
Query: 333 NGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNN---- 388
G + D+ + +L+ MY G DA VF++ P + VVS+T++I+GY +G N
Sbjct: 163 LGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKL 222
Query: 389 --------------------------EVFRLFRKMNSEGLKPTAVSISSILPACGRIASH 422
E LF+ M ++P ++ +++ AC + S
Sbjct: 223 FDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSI 282
Query: 423 KHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGC 482
+ GR++H ++ +G ++ + NA+ID+Y K G + A +F + KD ISW+ +I G
Sbjct: 283 ELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGY 342
Query: 483 SLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGR 528
+ K + LF+++ R+ E P +D + L AC+ + GR
Sbjct: 343 THMNLYKEALLLFQEMLRSGETP-NDVTMLSILPACAHLGAIDIGR 387
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 115/276 (41%), Gaps = 6/276 (2%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
++FD+ P D ++WN +I + ++ A+ F M++ V A +
Sbjct: 220 QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQS 279
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
LG+Q+H S + ALI LY+ ++ A LF++ W L
Sbjct: 280 GSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLI 339
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
Y + + AL LF M+ +G++ GR +H + + L+
Sbjct: 340 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH-VYIDKRLK 398
Query: 234 GEVFASN---SLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELF 290
G AS+ SL+ MY CG + A VF + K + SW +MI G +G + +LF
Sbjct: 399 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLF 458
Query: 291 RRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREI 326
RM G ++PD + +L C G L GR I
Sbjct: 459 SRMRKIG--IQPDDITFVGLLSACSHSGMLDLGRHI 492
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 345 bits (884), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 233/735 (31%), Positives = 344/735 (46%), Gaps = 93/735 (12%)
Query: 121 QLHTHAVKLALSSRAHTLIALIHLYASL----DDIAVAQTLFDKTAPFGSDCWTFLAKLY 176
Q H +K + + LI Y++ D V Q++ D T ++F + +Y
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTI------YSFSSLIY 89
Query: 177 VLEG--MPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
L + ++ +F RM + + + G+ +H ++ GL+
Sbjct: 90 ALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDM 149
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVV-------------------------- 268
+ F S+ MY+ CG M DAR VF++M KDVV
Sbjct: 150 DAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEME 209
Query: 269 ---------SWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGS 319
SW ++ G ++G EA+ +F++++ G PD V VS+VLP G
Sbjct: 210 SSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFC--PDQVTVSSVLPSVGDSEM 267
Query: 320 LKHGREIHGYLVRNGVECDVLLSNTLLKMYAD--------------------------CG 353
L GR IHGY+++ G+ D + + ++ MY G
Sbjct: 268 LNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITG 327
Query: 354 ASRDA---------RLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKP 404
SR+ L EQ VVSWTS+I G + G + E LFR+M G+KP
Sbjct: 328 LSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGK-DIEALELFREMQVAGVKP 386
Query: 405 TAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVF 464
V+I S+LPACG IA+ HGR HG+ +R + +++V +A+IDMY K G I + VF
Sbjct: 387 NHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVF 446
Query: 465 GEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMF 524
M K+ + W+ ++ G S+HG+ K + +F L R P D + + L AC +
Sbjct: 447 NMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKP-DFISFTSLLSACGQVGLT 505
Query: 525 EEGRVCFNHIR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLE 579
+EG F + P + H + V+LL R G EA I+E E V LL
Sbjct: 506 DEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLN 565
Query: 580 GCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPK 639
CR+ L + E+L LEP N YVLL N +A KG VD IR + GLK
Sbjct: 566 SCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKN 625
Query: 640 KACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDE-ER 698
C+W + +V+ GD SHP+ +I + +EMR G P DF+LHDV+E E+
Sbjct: 626 PGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQ 685
Query: 699 ECTQIEHSELLALAFGLISSQAG-PIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNF 757
E HSE LA+ FGL+++ G P+++ KN R+C CH KF+S GREI ++D N
Sbjct: 686 EQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNR 745
Query: 758 FHHFKHGHCTCEDFW 772
FHHFK G C+C DFW
Sbjct: 746 FHHFKDGICSCGDFW 760
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 217/741 (29%), Positives = 364/741 (49%), Gaps = 41/741 (5%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
QVFD+ P D ++WN+LI + S+ ++ A+ + ++ + A
Sbjct: 161 RQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNL 220
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCW-TFL 172
G+ LH A+K ++S L+ +Y A+ +FD+ S + T +
Sbjct: 221 LVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMI 280
Query: 173 AKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQ---GRDVHLIAVK 229
LE + S RM G LR + ++ +K
Sbjct: 281 CGYLKLEMVEESV-----RMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK 335
Query: 230 LGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMEL 289
G E N L+ +Y CG M AR VF M CKD VSW S+I G +Q+G+L EAM+L
Sbjct: 336 AGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKL 395
Query: 290 FRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMY 349
F+ M + + + D + ++ V + LK G+ +H +++G+ D+ +SN L+ MY
Sbjct: 396 FKMMMI--MEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMY 453
Query: 350 ADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSI 409
A CG D+ +F M + V+W ++I V+ G F + ++ +M + P +
Sbjct: 454 AKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGL-QVTTQMRKSEVVPDMATF 512
Query: 410 SSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNE 469
LP C +A+ + G+EIH LLR G E ++ + NA+I+MY K G + + VF M+
Sbjct: 513 LVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSR 572
Query: 470 KDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRV 529
+D ++W+ MI+ ++G+G+ ++ F +E++ P D ++ A ++ACS + + +EG
Sbjct: 573 RDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVP-DSVVFIAIIYACSHSGLVDEGLA 631
Query: 530 CFNHIR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIH 584
CF ++ PMI H A V LL+R +A FI+ I+ + +L CR
Sbjct: 632 CFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTS 691
Query: 585 GEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTW 644
G+ ++V ++ EL P + +L N +A K D V IR++++++ + +W
Sbjct: 692 GDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSW 751
Query: 645 TLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEERECTQ-- 702
+ VHVF +GD S P+ + I +L+ M EG P + RE +Q
Sbjct: 752 IEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIP----------DPREVSQNL 801
Query: 703 ----------IEHSELLALAFGLISSQAG-PIRLEKNSRVCRGCHDFAKFVSKVTGREII 751
HSE LA+AFGL++++ G P+++ KN RVC CH+ K +SK+ GREI+
Sbjct: 802 EEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREIL 861
Query: 752 LKDPNFFHHFKHGHCTCEDFW 772
++D N FH FK G C+C+D W
Sbjct: 862 VRDANRFHLFKDGTCSCKDRW 882
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/462 (27%), Positives = 217/462 (46%), Gaps = 7/462 (1%)
Query: 60 SPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAADFSLG 119
SP + WN++I N FP A+ + ++ V A D +G
Sbjct: 66 SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMG 125
Query: 120 KQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLE 179
++ + + S AL+ +Y+ + + A+ +FD+ W L Y
Sbjct: 126 DLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSH 185
Query: 180 GMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFAS 239
G ALE++H + + ++QG+ +H A+K G+ V +
Sbjct: 186 GYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 245
Query: 240 NSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLS 299
N L+ MY+ DAR VF++M +D VS+ +MI G ++ + E++ RM LE L
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESV----RMFLENLD 301
Query: 300 -VKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDA 358
KPDL+ VS+VL CG + L + I+ Y+++ G + + N L+ +YA CG A
Sbjct: 302 QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITA 361
Query: 359 RLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGR 418
R VF M K VSW S+I GY++ G E +LF+ M + ++ ++ R
Sbjct: 362 RDVFNSMECKDTVSWNSIISGYIQSGDL-MEAMKLFKMMMIMEEQADHITYLMLISVSTR 420
Query: 419 IASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMM 478
+A K G+ +H +++G+ D++VSNA+IDMY K G + +L +F M DT++W+ +
Sbjct: 421 LADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTV 480
Query: 479 IFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACST 520
I C G G+ + Q+ R SE D + L C++
Sbjct: 481 ISACVRFGDFATGLQVTTQM-RKSEVVPDMATFLVTLPMCAS 521
Score = 167 bits (422), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 193/380 (50%), Gaps = 5/380 (1%)
Query: 120 KQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGS-DCWTFLAKLYVL 178
+++H + L L S LI Y+ + A + ++F + +P + W + + +
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 179 EGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFA 238
G+ ALE + ++ + G V+ + +G E ++F
Sbjct: 84 NGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFV 143
Query: 239 SNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGL 298
N+L+ MY G + AR VF++MP +D+VSW S+I G +G EA+E++ L+
Sbjct: 144 GNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYH--ELKNS 201
Query: 299 SVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDA 358
+ PD VS+VLP G + +K G+ +HG+ +++GV V+++N L+ MY DA
Sbjct: 202 WIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDA 261
Query: 359 RLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGR 418
R VF++M + VS+ +MI GY+K V R+F + N + KP +++SS+L ACG
Sbjct: 262 RRVFDEMDVRDSVSYNTMICGYLKLEMVEESV-RMFLE-NLDQFKPDLLTVSSVLRACGH 319
Query: 419 IASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMM 478
+ + I+ Y+L+ G + V N +ID+Y K G + A +VF M KDT+SW+ +
Sbjct: 320 LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSI 379
Query: 479 IFGCSLHGQGKLGVDLFRQL 498
I G G + LF+ +
Sbjct: 380 ISGYIQSGDLMEAMKLFKMM 399
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 3/211 (1%)
Query: 319 SLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQM-PSKTVVSWTSMI 377
+L R IH ++ G++ S L+ Y+ + VF ++ P+K V W S+I
Sbjct: 19 NLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSII 78
Query: 378 RGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGV 437
R + K G F E + K+ + P + S++ AC + + G ++ +L G
Sbjct: 79 RAFSKNGLFP-EALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGF 137
Query: 438 EFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQ 497
E D+ V NA++DMY + G + A VF EM +D +SW+ +I G S HG + ++++ +
Sbjct: 138 ESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHE 197
Query: 498 LERNSEAPLDDNIYAAALHACSTARMFEEGR 528
L +NS D ++ L A + ++G+
Sbjct: 198 L-KNSWIVPDSFTVSSVLPAFGNLLVVKQGQ 227
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 342 bits (877), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 214/725 (29%), Positives = 346/725 (47%), Gaps = 12/725 (1%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAAD 115
+FD+ E DT++WN++ + N H + F+ M R
Sbjct: 217 IFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDH 276
Query: 116 FSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKL 175
G+ +H VK+ S L+ +YA A +F + W L
Sbjct: 277 QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMAS 336
Query: 176 YVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGE 235
+V +G AL L M+ +GR +H + V GL
Sbjct: 337 FVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYN 396
Query: 236 VFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNL 295
N+L+ MY G M ++R V +MP +DVV+W ++I G ++ + +A+ F+ M +
Sbjct: 397 QIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRV 456
Query: 296 EGLSVKPDLVMVSTVLPVCGMIGSL-KHGREIHGYLVRNGVECDVLLSNTLLKMYADCGA 354
EG+S + + V +VL C + G L + G+ +H Y+V G E D + N+L+ MYA CG
Sbjct: 457 EGVS--SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGD 514
Query: 355 SRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILP 414
++ +F + ++ +++W +M+ G EV +L KM S G+ S S L
Sbjct: 515 LSSSQDLFNGLDNRNIITWNAMLAANAHHG-HGEEVLKLVSKMRSFGVSLDQFSFSEGLS 573
Query: 415 ACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTIS 474
A ++A + G+++HG ++ G E D + NA DMY K G I + + + S
Sbjct: 574 AAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPS 633
Query: 475 WSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHI 534
W+++I HG + F ++ P + + L ACS + ++G ++ I
Sbjct: 634 WNILISALGRHGYFEEVCATFHEMLEMGIKP-GHVTFVSLLTACSHGGLVDKGLAYYDMI 692
Query: 535 R-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYAL 589
P I HC + LL R G EA FI + ++ + V R LL C+IHG
Sbjct: 693 ARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDR 752
Query: 590 GKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYRE 649
G++ E L +LEP + YVL N A G+ + V+ +R+ + + +K K+AC+W ++
Sbjct: 753 GRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKD 812
Query: 650 KVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEE-RECTQIEHSEL 708
KV FG GD +HP+ EI + L+ + ++ G +L D DEE +E HSE
Sbjct: 813 KVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSER 872
Query: 709 LALAFGLISSQAGP-IRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCT 767
LALA+ L+S+ G +R+ KN R+C CH KFVS+V GR I+L+D FHHF+ G C+
Sbjct: 873 LALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCS 932
Query: 768 CEDFW 772
C+D+W
Sbjct: 933 CKDYW 937
Score = 176 bits (445), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 205/431 (47%), Gaps = 10/431 (2%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXA-SRLA 113
+FD P + ++WNT++ + + + F +M + A R
Sbjct: 13 HLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSG 72
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
+ F G Q+H K L S + A++HLY ++ ++ +F++ WT L
Sbjct: 73 SMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLM 132
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
Y +G P ++++ M ++ GR + VK GLE
Sbjct: 133 VGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLE 192
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELF--- 290
++ NSL+ M G++ A +F++M +D +SW S+ QNG + E+ +F
Sbjct: 193 SKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLM 252
Query: 291 RRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYA 350
RR + E + VST+L V G + K GR IHG +V+ G + V + NTLL+MYA
Sbjct: 253 RRFHDE-----VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYA 307
Query: 351 DCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSIS 410
G S +A LVF+QMP+K ++SW S++ +V G + + L M S G V+ +
Sbjct: 308 GAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGR-SLDALGLLCSMISSGKSVNYVTFT 366
Query: 411 SILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK 470
S L AC + GR +HG ++ +G+ ++ + NA++ MY K G ++ + V +M +
Sbjct: 367 SALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR 426
Query: 471 DTISWSMMIFG 481
D ++W+ +I G
Sbjct: 427 DVVAWNALIGG 437
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 186/387 (48%), Gaps = 5/387 (1%)
Query: 144 LYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXX 203
+Y + A+ LFD W + V G+ +E F +M
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 204 XXXXXXXXXMMGSL-RQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKM 262
GS+ R+G VH K GL +V+ S ++L +Y G + +R VFE+M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 263 PCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKH 322
P ++VVSWTS++ G GE E +++++ M EG+ + +S V+ CG++
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNEN--SMSLVISSCGLLKDESL 178
Query: 323 GREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVK 382
GR+I G +V++G+E + + N+L+ M G A +F+QM + +SW S+ Y +
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238
Query: 383 KGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDIN 442
G E FR+F M + + ++S++L G + K GR IHG +++ G + +
Sbjct: 239 NGHI-EESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 297
Query: 443 VSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNS 502
V N ++ MY +G A VF +M KD ISW+ ++ G+ + L + +S
Sbjct: 298 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM-ISS 356
Query: 503 EAPLDDNIYAAALHACSTARMFEEGRV 529
++ + +AL AC T FE+GR+
Sbjct: 357 GKSVNYVTFTSALAACFTPDFFEKGRI 383
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 342 bits (876), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 209/726 (28%), Positives = 360/726 (49%), Gaps = 19/726 (2%)
Query: 58 DKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAADFS 117
D S + + N + +L + + + F M+ V + +
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332
Query: 118 LGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYV 177
LG+Q+H A+KL L +LI++Y L A+T+FD + W +
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392
Query: 178 LEGMPRSALELFHRMVX-XXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEV 236
G+ A+ LF +++ + L + VH+ A+K+ +
Sbjct: 393 QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS 452
Query: 237 FASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLE 296
F S +L+ Y M++A ++FE+ D+V+W +M+ G Q+ + + ++LF M+ +
Sbjct: 453 FVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQ 511
Query: 297 GLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASR 356
G + D ++TV CG + ++ G+++H Y +++G + D+ +S+ +L MY CG
Sbjct: 512 G--ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMS 569
Query: 357 DARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPAC 416
A+ F+ +P V+WT+MI G ++ G F +F +M G+ P +I+++ A
Sbjct: 570 AAQFAFDSIPVPDDVAWTTMISGCIENGE-EERAFHVFSQMRLMGVLPDEFTIATLAKAS 628
Query: 417 GRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWS 476
+ + + GR+IH L+ D V +++DMY K G+I A +F + + +W+
Sbjct: 629 SCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWN 688
Query: 477 MMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG 536
M+ G + HG+GK + LF+Q++ P D + L ACS + + E + H+R
Sbjct: 689 AMLVGLAQHGEGKETLQLFKQMKSLGIKP-DKVTFIGVLSACSHSGLVSEA---YKHMRS 744
Query: 537 --------PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYA 588
P I H + L R GL +A I +E + R LL CR+ G+
Sbjct: 745 MHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTE 804
Query: 589 LGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYR 648
GK+V +L ELEPL++ YVLL N +A K D + R ++ +K +W +
Sbjct: 805 TGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVK 864
Query: 649 EKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDV-DEERECTQIEHSE 707
K+H+F D S+ + + I ++ + +++ EG P+ DF+L DV +EE+E HSE
Sbjct: 865 NKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSE 924
Query: 708 LLALAFGLISS-QAGPIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHC 766
LA+AFGL+S+ + PIR+ KN RVC CH+ K+++KV REI+L+D N FH FK G C
Sbjct: 925 KLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGIC 984
Query: 767 TCEDFW 772
+C D+W
Sbjct: 985 SCGDYW 990
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/487 (27%), Positives = 233/487 (47%), Gaps = 15/487 (3%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVX-XXXXXXXXXXXASRLAA 114
VFD E D ++WN++I N A+ F Q+LR + AS L
Sbjct: 372 VFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPE 431
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
SL KQ+H HA+K+ S + ALI Y+ + A+ LF++ F W +
Sbjct: 432 GLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERH-NFDLVAWNAMMA 490
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
Y L+LF M + ++ QG+ VH A+K G +
Sbjct: 491 GYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDL 550
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
+++ S+ +L MYV CG M A+ F+ +P D V+WT+MI GC++NGE A +F +M
Sbjct: 551 DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMR 610
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGA 354
L G V PD ++T+ + +L+ GR+IH ++ D + +L+ MYA CG+
Sbjct: 611 LMG--VLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGS 668
Query: 355 SRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILP 414
DA +F+++ + +W +M+ G + G E +LF++M S G+KP V+ +L
Sbjct: 669 IDDAYCLFKRIEMMNITAWNAMLVGLAQHGE-GKETLQLFKQMKSLGIKPDKVTFIGVLS 727
Query: 415 AC---GRIA-SHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK 470
AC G ++ ++KH R +HG G++ +I + + D ++G + A N+ M+ +
Sbjct: 728 ACSHSGLVSEAYKHMRSMHG---DYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSME 784
Query: 471 DTIS-WSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRV 529
+ S + ++ C + G + G + +L PLD + Y + + A ++E ++
Sbjct: 785 ASASMYRTLLAACRVQGDTETGKRVATKLLELE--PLDSSAYVLLSNMYAAASKWDEMKL 842
Query: 530 CFNHIRG 536
++G
Sbjct: 843 ARTMMKG 849
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 120/249 (48%), Gaps = 21/249 (8%)
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGE-----LSEAMEL 289
E F N+L+ MY CGS+ AR VF+KMP +D+VSW S++ Q+ E + +A L
Sbjct: 73 ERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLL 132
Query: 290 FRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMY 349
FR + + V + +S +L +C G + HGY + G++ D ++ L+ +Y
Sbjct: 133 FRILRQD--VVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIY 190
Query: 350 ADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVS- 408
G ++ +++FE+MP + VV W M++ Y++ GF E L +S GL P ++
Sbjct: 191 LKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEM-GFKEEAIDLSSAFHSSGLNPNEITL 249
Query: 409 -----ISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNV 463
IS G++ S +G + +I N + Y+ SG + L
Sbjct: 250 RLLARISGDDSDAGQVKSFANGNDASSV-------SEIIFRNKGLSEYLHSGQYSALLKC 302
Query: 464 FGEMNEKDT 472
F +M E D
Sbjct: 303 FADMVESDV 311
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 106/492 (21%), Positives = 197/492 (40%), Gaps = 82/492 (16%)
Query: 113 AADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFL 172
++D LGK H + + + LI +Y+ + A+ +FDK W +
Sbjct: 52 SSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSI 111
Query: 173 AKLY------VLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLI 226
Y V+E + ++ L LF + G + H
Sbjct: 112 LAAYAQSSECVVENIQQAFL-LFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGY 170
Query: 227 AVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEA 286
A K+GL+G+ F + +L+ +Y+ G +++ +++FE+MP +DVV W M++ ++ G EA
Sbjct: 171 ACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 230
Query: 287 MELFRRMNLEGLSVKPDLVMVSTVLPV------CGMIGSLKHGRE-------------IH 327
++L + GL+ P+ + + + + G + S +G + +
Sbjct: 231 IDLSSAFHSSGLN--PNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLS 288
Query: 328 GYL---------------VRNGVECD---------------------------------- 338
YL V + VECD
Sbjct: 289 EYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDL 348
Query: 339 -VLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKM 397
+ +SN+L+ MY AR VF+ M + ++SW S+I G + + G E LF ++
Sbjct: 349 MLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAG-IAQNGLEVEAVCLFMQL 407
Query: 398 NSEGLKPTAVSISSILPACGRIASH-KHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGA 456
GLKP +++S+L A + +++H + ++ D VS A+ID Y ++
Sbjct: 408 LRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRC 467
Query: 457 IACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALH 516
+ A +F E + D ++W+ M+ G + G + LF + + E DD A
Sbjct: 468 MKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERS-DDFTLATVFK 525
Query: 517 ACSTARMFEEGR 528
C +G+
Sbjct: 526 TCGFLFAINQGK 537
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 338 bits (867), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 225/728 (30%), Positives = 354/728 (48%), Gaps = 41/728 (5%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VF + P W ++++N +I +L N F LA F +M + L
Sbjct: 85 RVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGK 144
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
L + + V +T+++ +DD A+++FD+ W L
Sbjct: 145 ARELFEIMPERDV-----CSWNTMLSGYAQNGCVDD---ARSVFDRMPEKNDVSWNALLS 196
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
YV A LF ++ + RQ D +
Sbjct: 197 AYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEA-RQFFDSMNVR------- 248
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
+V + N+++ Y G + +AR +F++ P +DV +WT+M+ G +QN + EA ELF +M
Sbjct: 249 DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM- 307
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGS--LKHGREIHGYL-VRNGVECDVLLSNTLLKMYAD 351
P+ VS + G + ++ +E+ + RN V NT++ YA
Sbjct: 308 -------PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRN-----VSTWNTMITGYAQ 355
Query: 352 CGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISS 411
CG +A+ +F++MP + VSW +MI GY + G + E RLF +M EG + S SS
Sbjct: 356 CGKISEAKNLFDKMPKRDPVSWAAMIAGY-SQSGHSFEALRLFVQMEREGGRLNRSSFSS 414
Query: 412 ILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKD 471
L C + + + G+++HG L++ G E V NA++ MY K G+I A ++F EM KD
Sbjct: 415 ALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKD 474
Query: 472 TISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCF 531
+SW+ MI G S HG G++ + F ++R P DD A L ACS + ++GR F
Sbjct: 475 IVSWNTMIAGYSRHGFGEVALRFFESMKREGLKP-DDATMVAVLSACSHTGLVDKGRQYF 533
Query: 532 NHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGE 586
+ P H A V LL R GL ++A ++ E + LL R+HG
Sbjct: 534 YTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGN 593
Query: 587 YALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTL 646
L + +++ +EP N+ YVLL N +A G+ V K+R +R++G+K +W
Sbjct: 594 TELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIE 653
Query: 647 YREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEERECTQIE-H 705
+ K H F GD HP K EI + L+ M+ G K LHDV+EE + + H
Sbjct: 654 IQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYH 713
Query: 706 SELLALAFGLISSQAG-PIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHG 764
SE LA+A+G++ +G PIR+ KN RVC CH+ K+++++TGR IIL+D N FHHFK G
Sbjct: 714 SERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDG 773
Query: 765 HCTCEDFW 772
C+C D+W
Sbjct: 774 SCSCGDYW 781
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 138/321 (42%), Gaps = 28/321 (8%)
Query: 240 NSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLS 299
N + Y+ G +A VF++MP VS+ MI G ++NGE A +LF M
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM------ 121
Query: 300 VKPDLVMVSTVLPVCGMI--GSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRD 357
P+ +VS + + G + +L RE+ + E DV NT+L YA G D
Sbjct: 122 --PERDLVSWNVMIKGYVRNRNLGKARELFEIM----PERDVCSWNTMLSGYAQNGCVDD 175
Query: 358 ARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACG 417
AR VF++MP K VSW +++ YV+ E LF+ + L VS + +L G
Sbjct: 176 ARSVFDRMPEKNDVSWNALLSAYVQNSKM-EEACMLFKSRENWAL----VSWNCLL---G 227
Query: 418 RIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSM 477
K E + V D+ N +I Y +SG I A +F E +D +W+
Sbjct: 228 GFVKKKKIVEARQFFDSMNVR-DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTA 286
Query: 478 MIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRGP 537
M+ G + + +LF ++ +E + A L E + F+ +
Sbjct: 287 MVSGYIQNRMVEEARELFDKMPERNEVS-----WNAMLAGYVQGERMEMAKELFDVMPCR 341
Query: 538 MIAHCAQKVSLLARCGLFDEA 558
++ ++ A+CG EA
Sbjct: 342 NVSTWNTMITGYAQCGKISEA 362
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 121/272 (44%), Gaps = 30/272 (11%)
Query: 266 DVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMI-GSLKHGR 324
D+ W I ++ G +EA+ +F+RM P VS GMI G L++G
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRM--------PRWSSVS----YNGMISGYLRNGE 110
Query: 325 -EIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKK 383
E+ L E D++ N ++K Y AR +FE MP + V SW +M+ GY +
Sbjct: 111 FELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQN 170
Query: 384 GGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINV 443
G ++ +F +M + VS +++L A E L ++ + +
Sbjct: 171 GCV-DDARSVFDRMPEK----NDVSWNALLSA----YVQNSKMEEACMLFKSRENWALVS 221
Query: 444 SNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSE 503
N ++ +VK I A F MN +D +SW+ +I G + G+ +D RQL E
Sbjct: 222 WNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGK----IDEARQL--FDE 275
Query: 504 APLDDNI-YAAALHACSTARMFEEGRVCFNHI 534
+P+ D + A + RM EE R F+ +
Sbjct: 276 SPVQDVFTWTAMVSGYIQNRMVEEARELFDKM 307
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 9/144 (6%)
Query: 336 ECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFR 395
+ D+ N + Y G +A VF++MP + VS+ MI GY++ G F L R
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNG-----EFELAR 115
Query: 396 KMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSG 455
K+ E + VS + ++ R + RE+ + E D+ N ++ Y ++G
Sbjct: 116 KLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIM----PERDVCSWNTMLSGYAQNG 171
Query: 456 AIACALNVFGEMNEKDTISWSMMI 479
+ A +VF M EK+ +SW+ ++
Sbjct: 172 CVDDARSVFDRMPEKNDVSWNALL 195
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 337 bits (865), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 187/565 (33%), Positives = 313/565 (55%), Gaps = 11/565 (1%)
Query: 215 GSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMI 274
G++ + + H +++ LEG+V N L+ Y CG + AR VF+ M + +VSW +MI
Sbjct: 75 GAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMI 134
Query: 275 RGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNG 334
+N SEA+++F M EG K +S+VL CG+ +++H V+
Sbjct: 135 GLYTRNRMESEALDIFLEMRNEGF--KFSEFTISSVLSACGVNCDALECKKLHCLSVKTC 192
Query: 335 VECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLF 394
++ ++ + LL +YA CG +DA VFE M K+ V+W+SM+ GYV+ + E L+
Sbjct: 193 IDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYE-EALLLY 251
Query: 395 RKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKS 454
R+ L+ ++SS++ AC +A+ G+++H + ++G ++ V+++ +DMY K
Sbjct: 252 RRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKC 311
Query: 455 GAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAA 514
G++ + +F E+ EK+ W+ +I G + H + K + LF +++++ P ++ +++
Sbjct: 312 GSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHP-NEVTFSSL 370
Query: 515 LHACSTARMFEEGRVCFNHIR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQ 569
L C + EEGR F +R P + H + V +L R GL EA I+ +
Sbjct: 371 LSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDP 430
Query: 570 HPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRE 629
+ LL CR++ L + E+L ELEP NA N+VLL N +A + + + K R+
Sbjct: 431 TASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRK 490
Query: 630 TIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDF 689
+R+ +K + +W ++KVH F G+ HPR +EICS L + + R G +P +
Sbjct: 491 LLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEH 550
Query: 690 SLHDVD-EERECTQIEHSELLALAFGLIS-SQAGPIRLEKNSRVCRGCHDFAKFVSKVTG 747
LHDV+ ++E ++HSE LAL FGL+ ++ P+R+ KN R+C CH+F K S T
Sbjct: 551 ELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATR 610
Query: 748 REIILKDPNFFHHFKHGHCTCEDFW 772
R II++D N FHHF GHC+C DFW
Sbjct: 611 RFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 189/403 (46%), Gaps = 12/403 (2%)
Query: 119 GKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVL 178
K H +++ L L LI+ Y+ + +A+ +FD W + LY
Sbjct: 80 AKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 139
Query: 179 EGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFA 238
M AL++F M + + + +H ++VK ++ ++
Sbjct: 140 NRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYV 199
Query: 239 SNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGL 298
+LL +Y CG ++DA VFE M K V+W+SM+ G VQN EA+ L+RR + +
Sbjct: 200 GTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRA--QRM 257
Query: 299 SVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDA 358
S++ + +S+V+ C + +L G+++H + ++G +V ++++ + MYA CG+ R++
Sbjct: 258 SLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRES 317
Query: 359 RLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGR 418
++F ++ K + W ++I G+ K EV LF KM +G+ P V+ SS+L CG
Sbjct: 318 YIIFSEVQEKNLELWNTIISGFAKHAR-PKEVMILFEKMQQDGMHPNEVTFSSLLSVCGH 376
Query: 419 IASHKHGREIHGYLLRNGVEFDINV--SNAVIDMYVKSGAIACALNVFGEMNEKDTIS-W 475
+ GR L+R NV + ++D+ ++G ++ A + + T S W
Sbjct: 377 TGLVEEGRRFFK-LMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIW 435
Query: 476 SMMIFGCSLHGQGKLGVDLFRQL-----ERNSEAPLDDNIYAA 513
++ C ++ +L +L E L NIYAA
Sbjct: 436 GSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAA 478
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 148/287 (51%), Gaps = 13/287 (4%)
Query: 306 MVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQM 365
+V +L +C G++ + HG ++R +E DV L N L+ Y+ CG AR VF+ M
Sbjct: 63 LVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM 122
Query: 366 PSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHG 425
+++VSW +MI G + +E +F +M +EG K + +ISS+L ACG
Sbjct: 123 LERSLVSWNTMI-GLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC 181
Query: 426 REIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLH 485
+++H ++ ++ ++ V A++D+Y K G I A+ VF M +K +++WS M+ G +
Sbjct: 182 KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQN 241
Query: 486 GQGKLGVDLFRQLERNSEAPLDDNIY--AAALHACSTARMFEEGR-----VCFNHIRGPM 538
+ + L+R+ +R S L+ N + ++ + ACS EG+ +C + G
Sbjct: 242 KNYEEALLLYRRAQRMS---LEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGF-GSN 297
Query: 539 IAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHG 585
+ + V + A+CG E+ + E + E++ E+ ++ G H
Sbjct: 298 VFVASSAVDMYAKCGSLRESYIIFSEVQ-EKNLELWNTIISGFAKHA 343
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 140/325 (43%), Gaps = 4/325 (1%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
QVFD E ++WNT+I + N A+ F +M A +
Sbjct: 117 QVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNC 176
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
D K+LH +VK + + AL+ LYA I A +F+ S W+ +
Sbjct: 177 DALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVA 236
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
YV AL L+ R + +L +G+ +H + K G
Sbjct: 237 GYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGS 296
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
VF ++S + MY CGS+R++ ++F ++ K++ W ++I G ++ E M LF +M
Sbjct: 297 NVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQ 356
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYL-VRNGVECDVLLSNTLLKMYADCG 353
+G+ P+ V S++L VCG G ++ GR + G+ +V+ + ++ + G
Sbjct: 357 QDGM--HPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAG 414
Query: 354 ASRDARLVFEQMPSKTVVS-WTSMI 377
+A + + +P S W S++
Sbjct: 415 LLSEAYELIKSIPFDPTASIWGSLL 439
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 201/570 (35%), Positives = 307/570 (53%), Gaps = 17/570 (2%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIR 275
SL VH + G + + F + L+ MY D GS+ AR VF+K + + W ++ R
Sbjct: 92 SLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFR 151
Query: 276 GCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVC----GMIGSLKHGREIHGYLV 331
G E + L+ +MN G V+ D + VL C + L G+EIH +L
Sbjct: 152 ALTLAGHGEEVLGLYWKMNRIG--VESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLT 209
Query: 332 RNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVF 391
R G V + TL+ MYA G A VF MP + VVSW++MI Y K G E
Sbjct: 210 RRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGK-AFEAL 268
Query: 392 RLFRKM--NSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVID 449
R FR+M ++ P +V++ S+L AC +A+ + G+ IHGY+LR G++ + V +A++
Sbjct: 269 RTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVT 328
Query: 450 MYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDN 509
MY + G + VF M+++D +SW+ +I +HG GK + +F ++ N +P
Sbjct: 329 MYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVT 388
Query: 510 IYAAALHACSTARMFEEGRVCF-----NHIRGPMIAHCAQKVSLLARCGLFDEAMVFIRE 564
+ + L ACS + EEG+ F +H P I H A V LL R DEA +++
Sbjct: 389 -FVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQD 447
Query: 565 QKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMV 624
+ E P+V LL CRIHG L ++ +L LEP NA NYVLL + +A D V
Sbjct: 448 MRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEV 507
Query: 625 DKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVE 684
++++ + RGL+ W R K++ F + D +P ++I + L E+M+ +G
Sbjct: 508 KRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYI 567
Query: 685 PKWDFSLHDVD-EERECTQIEHSELLALAFGLISSQAG-PIRLEKNSRVCRGCHDFAKFV 742
P+ L++++ EE+E + HSE LALAFGLI++ G PIR+ KN R+C CH F KF+
Sbjct: 568 PQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFI 627
Query: 743 SKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
SK +EI+++D N FH FK+G C+C D+W
Sbjct: 628 SKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 191/418 (45%), Gaps = 11/418 (2%)
Query: 117 SLGKQLHTHAVKLALSSRAHTLIA--LIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
SL L H L S +A LI +Y+ L + A+ +FDKT W L +
Sbjct: 92 SLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFR 151
Query: 175 LYVLEGMPRSALELFHRM----VXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKL 230
L G L L+ +M V + L +G+++H +
Sbjct: 152 ALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRR 211
Query: 231 GLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELF 290
G V+ +L+ MY G + A VF MP ++VVSW++MI +NG+ EA+ F
Sbjct: 212 GYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTF 271
Query: 291 RRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYA 350
R M E P+ V + +VL C + +L+ G+ IHGY++R G++ + + + L+ MY
Sbjct: 272 REMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYG 331
Query: 351 DCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSIS 410
CG + VF++M + VVSW S+I Y G+ + ++F +M + G PT V+
Sbjct: 332 RCGKLEVGQRVFDRMHDRDVVSWNSLISSY-GVHGYGKKAIQIFEEMLANGASPTPVTFV 390
Query: 411 SILPACGRIASHKHGREIHGYLLRN-GVEFDINVSNAVIDMYVKSGAIACALNVFGEM-N 468
S+L AC + G+ + + R+ G++ I ++D+ ++ + A + +M
Sbjct: 391 SVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRT 450
Query: 469 EKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEE 526
E W ++ C +HG +L R+L + P + Y + A+M++E
Sbjct: 451 EPGPKVWGSLLGSCRIHGNVELAERASRRL--FALEPKNAGNYVLLADIYAEAQMWDE 506
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 186/389 (47%), Gaps = 31/389 (7%)
Query: 268 VSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIH 327
+S +I+ + G+L +A+ + + + P ++ CG SL +H
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQES------SPSQQTYELLILCCGHRSSLSDALRVH 100
Query: 328 GYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFN 387
+++ NG + D L+ L+ MY+D G+ AR VF++ +T+ W ++ R + G
Sbjct: 101 RHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRA-LTLAGHG 159
Query: 388 NEVFRLFRKMNSEGLKPTAVSISSILPACGRIASH------KHGREIHGYLLRNGVEFDI 441
EV L+ KMN G++ + + +L AC +AS G+EIH +L R G +
Sbjct: 160 EEVLGLYWKMNRIGVESDRFTYTYVLKAC--VASECTVNHLMKGKEIHAHLTRRGYSSHV 217
Query: 442 NVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERN 501
+ ++DMY + G + A VFG M ++ +SWS MI + +G+ + FR++ R
Sbjct: 218 YIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRE 277
Query: 502 SEAPLDDNI-YAAALHACSTARMFEEGRVCFNHI--RG--PMIAHCAQKVSLLARCGLFD 556
++ +++ + L AC++ E+G++ +I RG ++ + V++ RCG +
Sbjct: 278 TKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLE 337
Query: 557 EAM-VFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAE----NYVLL 611
VF R ++ L+ +HG GK+ I+ E+ A +V +
Sbjct: 338 VGQRVFDRMH--DRDVVSWNSLISSYGVHG---YGKKAIQIFEEMLANGASPTPVTFVSV 392
Query: 612 LNWHAGKGKLDMVDKIRETI-RERGLKPK 639
L + +G ++ ++ ET+ R+ G+KP+
Sbjct: 393 LGACSHEGLVEEGKRLFETMWRDHGIKPQ 421
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 118/286 (41%), Gaps = 10/286 (3%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VFDK+ + WN L H + + +M R V A +A+
Sbjct: 133 KVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKAC-VAS 191
Query: 115 DFSL-----GKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCW 169
+ ++ GK++H H + SS + + L+ +YA + A +F W
Sbjct: 192 ECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSW 251
Query: 170 TFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXX--XMMGSLRQGRDVHLIA 227
+ + Y G AL F M+ + +L QG+ +H
Sbjct: 252 SAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYI 311
Query: 228 VKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAM 287
++ GL+ + ++L+ MY CG + + VF++M +DVVSW S+I +G +A+
Sbjct: 312 LRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAI 371
Query: 288 ELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN 333
++F M G S P V +VL C G ++ G+ + + R+
Sbjct: 372 QIFEEMLANGASPTP--VTFVSVLGACSHEGLVEEGKRLFETMWRD 415
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 335 bits (859), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 211/667 (31%), Positives = 336/667 (50%), Gaps = 15/667 (2%)
Query: 119 GKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVL 178
G Q+H + +K T LI +Y + +A +FD W+ L +VL
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVL 84
Query: 179 EGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFA 238
G + +L LF M ++ +L +G +H +K+G E V
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 144
Query: 239 SNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGL 298
NSL+ MY CG + +A VF ++ + ++SW +MI G V G S+A++ F M +
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANI 204
Query: 299 SVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVEC--DVLLSNTLLKMYADCGASR 356
+PD ++++L C G + G++IHG+LVR+G C ++ +L+ +Y CG
Sbjct: 205 KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLF 264
Query: 357 DARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPAC 416
AR F+Q+ KT++SW+S+I GY ++G F E LF+++ + + ++SSI+
Sbjct: 265 SARKAFDQIKEKTMISWSSLILGYAQEGEF-VEAMGLFKRLQELNSQIDSFALSSIIGVF 323
Query: 417 GRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWS 476
A + G+++ ++ + +V N+V+DMY+K G + A F EM KD ISW+
Sbjct: 324 ADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWT 383
Query: 477 MMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFN---- 532
++I G HG GK V +F ++ R++ P D+ Y A L ACS + M +EG F+
Sbjct: 384 VVITGYGKHGLGKKSVRIFYEMLRHNIEP-DEVCYLAVLSACSHSGMIKEGEELFSKLLE 442
Query: 533 -HIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGK 591
H P + H A V LL R G EA I I+ + + + LL CR+HG+ LGK
Sbjct: 443 THGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGK 502
Query: 592 QVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKV 651
+V + L ++ N NYV++ N + G + RE +GLK + +W +V
Sbjct: 503 EVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREV 562
Query: 652 HVFGTGDVSHPRKKEICSALQGFMEEMRTE-GVEPKWDFSLHDVDEE-RECTQIEHSEL- 708
H F +G+ SHP I L+ +R E G LHD+D+E +E HSE
Sbjct: 563 HFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKL 622
Query: 709 ---LALAFGLISSQAGPIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGH 765
LALA G ++ + IR+ KN RVC CH+F K +SK+T +++D FH F+ G
Sbjct: 623 AIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGC 682
Query: 766 CTCEDFW 772
C+C D+W
Sbjct: 683 CSCGDYW 689
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/440 (29%), Positives = 228/440 (51%), Gaps = 33/440 (7%)
Query: 219 QGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCV 278
QG VH +K G + SN L+ MY C A VF+ MP ++VVSW++++ G V
Sbjct: 24 QGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHV 83
Query: 279 QNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECD 338
NG+L ++ LF M +G + P+ ST L CG++ +L+ G +IHG+ ++ G E
Sbjct: 84 LNGDLKGSLSLFSEMGRQG--IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMM 141
Query: 339 VLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMN 398
V + N+L+ MY+ CG +A VF ++ ++++SW +MI G+V G+ ++ F M
Sbjct: 142 VEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFV-HAGYGSKALDTFGMMQ 200
Query: 399 SEGLK--PTAVSISSILPACGRIASHKHGREIHGYLLRNGVE--FDINVSNAVIDMYVKS 454
+K P +++S+L AC G++IHG+L+R+G ++ +++D+YVK
Sbjct: 201 EANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKC 260
Query: 455 GAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQL-ERNSEAPLDDNIYAA 513
G + A F ++ EK ISWS +I G + G+ + LF++L E NS+ +D ++
Sbjct: 261 GYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQ--IDSFALSS 318
Query: 514 ALHACSTARMFEEGR----VCFNHIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQ 569
+ + + +G+ + G + V + +CGL DEA E +++
Sbjct: 319 IIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLK- 377
Query: 570 HPEVLR--KLLEGCRIHGEYALGKQVIEQLCELEPLNAEN----YVLLLNW--HAG--KG 619
+V+ ++ G +G++ LGK+ + E+ N E Y+ +L+ H+G K
Sbjct: 378 --DVISWTVVITG---YGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKE 432
Query: 620 KLDMVDKIRETIRERGLKPK 639
++ K+ ET G+KP+
Sbjct: 433 GEELFSKLLET---HGIKPR 449
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 217/474 (45%), Gaps = 18/474 (3%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
++VFD PE + ++W+ L+ H+ N ++S F++M R + A L
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
G Q+H +K+ +L+ +Y+ I A+ +F + W +
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMI 180
Query: 174 KLYVLEGMPRSALELFHRM--VXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLG 231
+V G AL+ F M G + G+ +H V+ G
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSG 240
Query: 232 LEGEVFA--SNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMEL 289
A + SL+ +YV CG + AR F+++ K ++SW+S+I G Q GE EAM L
Sbjct: 241 FHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGL 300
Query: 290 FRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVR--NGVECDVLLSNTLLK 347
F+R L+ L+ + D +S+++ V L+ G+++ V+ +G+E VL N+++
Sbjct: 301 FKR--LQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL--NSVVD 356
Query: 348 MYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAV 407
MY CG +A F +M K V+SWT +I GY K G + R+F +M ++P V
Sbjct: 357 MYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKH-GLGKKSVRIFYEMLRHNIEPDEV 415
Query: 408 SISSILPACGRIASHKHGREIHGYLLRN-GVEFDINVSNAVIDMYVKSGAIACALNVFGE 466
++L AC K G E+ LL G++ + V+D+ ++G + A ++
Sbjct: 416 CYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDT 475
Query: 467 MNEKDTIS-WSMMIFGCSLHGQGKLGVDLFRQLER-NSEAPLD----DNIYAAA 514
M K + W ++ C +HG +LG ++ + L R +++ P + N+Y A
Sbjct: 476 MPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQA 529
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 149/304 (49%), Gaps = 19/304 (6%)
Query: 309 TVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK 368
++L VC G G ++H YL+++G +++ SN L+ MY C A VF+ MP +
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 369 TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREI 428
VVSW++++ G+V G + LF +M +G+ P + S+ L ACG + + + G +I
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSL-SLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI 129
Query: 429 HGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQG 488
HG+ L+ G E + V N+++DMY K G I A VF + ++ ISW+ MI G G G
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYG 189
Query: 489 KLGVDLFRQL-ERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRGPMIA---HCAQ 544
+D F + E N + D+ + L ACS+ M G+ I G ++ HC
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGK----QIHGFLVRSGFHCPS 245
Query: 545 K-------VSLLARCG-LFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQ 596
V L +CG LF F +Q E+ L+ G GE+ + ++
Sbjct: 246 SATITGSLVDLYVKCGYLFSARKAF--DQIKEKTMISWSSLILGYAQEGEFVEAMGLFKR 303
Query: 597 LCEL 600
L EL
Sbjct: 304 LQEL 307
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
Query: 408 SISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEM 467
++ SIL C R G ++H YLL++G ++ SN +IDMY K A VF M
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 468 NEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEG 527
E++ +SWS ++ G L+G K + LF ++ R P ++ ++ L AC E+G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYP-NEFTFSTNLKACGLLNALEKG 126
Query: 528 ----RVCFNHIRGPMIAHCAQKVSLLARCGLFDEAMVFIR 563
C M+ V + ++CG +EA R
Sbjct: 127 LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFR 166
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 334 bits (856), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 200/564 (35%), Positives = 299/564 (53%), Gaps = 11/564 (1%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIR 275
S + G D+H + VK G +V A SLL +Y G + DA +F+++P + VV+WT++
Sbjct: 126 SRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFS 185
Query: 276 GCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGV 335
G +G EA++LF++M G VKPD + VL C +G L G I Y+ +
Sbjct: 186 GYTTSGRHREAIDLFKKMVEMG--VKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEM 243
Query: 336 ECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFR 395
+ + + TL+ +YA CG AR VF+ M K +V+W++MI+GY F E LF
Sbjct: 244 QKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNS-FPKEGIELFL 302
Query: 396 KMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSG 455
+M E LKP SI L +C + + G + R+ ++ ++NA+IDMY K G
Sbjct: 303 QMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCG 362
Query: 456 AIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAAL 515
A+A VF EM EKD + + I G + +G KL +F Q E+ +P D + + L
Sbjct: 363 AMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISP-DGSTFLGLL 421
Query: 516 HACSTARMFEEGRVCFNHIR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQH 570
C A + ++G FN I + H V L R G+ D+A I + + +
Sbjct: 422 CGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPN 481
Query: 571 PEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRET 630
V LL GCR+ + L + V+++L LEP NA NYV L N ++ G+ D ++R+
Sbjct: 482 AIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDM 541
Query: 631 IRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFS 690
+ ++G+K +W KVH F D SHP +I + L+ EMR G P +F
Sbjct: 542 MNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFV 601
Query: 691 LHDV-DEERECTQIEHSELLALAFGLISSQAGP-IRLEKNSRVCRGCHDFAKFVSKVTGR 748
DV +EE+E HSE LA+A GLIS+ G IR+ KN RVC CH+ K +SK+T R
Sbjct: 602 FFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRR 661
Query: 749 EIILKDPNFFHHFKHGHCTCEDFW 772
EI+++D N FH F +G C+C D+W
Sbjct: 662 EIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 192/448 (42%), Gaps = 27/448 (6%)
Query: 64 DTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAADFSLGKQLH 123
+ +N+LI+ ++N+ F + F + +H + A A+ LG LH
Sbjct: 75 NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLH 134
Query: 124 THAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPR 183
+ VK + + +L+ +Y+ + A LFD+ WT L Y G R
Sbjct: 135 SLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHR 194
Query: 184 SALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLL 243
A++LF +MV +G L G + ++ ++ F +L+
Sbjct: 195 EAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLV 254
Query: 244 KMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPD 303
+Y CG M AR VF+ M KD+V+W++MI+G N E +ELF +M E L KPD
Sbjct: 255 NLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENL--KPD 312
Query: 304 LVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFE 363
+ L C +G+L G + R+ ++ ++N L+ MYA CGA VF+
Sbjct: 313 QFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFK 372
Query: 364 QMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHK 423
+M K +V + I G K G F +F + G+ P + +L C
Sbjct: 373 EMKEKDIVIMNAAISGLAKNGHVKLS-FAVFGQTEKLGISPDGSTFLGLLCGC------- 424
Query: 424 HGREIHGYLLRNGVEFDINVS------------NAVIDMYVKSGAIACALNVFGEMNEK- 470
+H L+++G+ F +S ++D++ ++G + A + +M +
Sbjct: 425 ----VHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRP 480
Query: 471 DTISWSMMIFGCSLHGQGKLGVDLFRQL 498
+ I W ++ GC L +L + ++L
Sbjct: 481 NAIVWGALLSGCRLVKDTQLAETVLKEL 508
Score = 133 bits (335), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 174/380 (45%), Gaps = 9/380 (2%)
Query: 221 RDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQN 280
+ +H+ + L + F N LLK + + + L+F ++ + S+I G V N
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89
Query: 281 GELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVL 340
E ++LF + GL + VL C S K G ++H +V+ G DV
Sbjct: 90 HLFHETLDLFLSIRKHGLYLHG--FTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVA 147
Query: 341 LSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSE 400
+LL +Y+ G DA +F+++P ++VV+WT++ GY G + E LF+KM
Sbjct: 148 AMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGR-HREAIDLFKKMVEM 206
Query: 401 GLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACA 460
G+KP + I +L AC + G I Y+ ++ + V ++++Y K G + A
Sbjct: 207 GVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKA 266
Query: 461 LNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACST 520
+VF M EKD ++WS MI G + + K G++LF Q+ + + P D L +C++
Sbjct: 267 RSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKP-DQFSIVGFLSSCAS 325
Query: 521 ARMFEEGRVCFNHI-RGPMIAHCAQKVSLL---ARCGLFDEAMVFIREQKIEQHPEVLRK 576
+ G + I R + + +L+ A+CG +E K E+ ++
Sbjct: 326 LGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNA 384
Query: 577 LLEGCRIHGEYALGKQVIEQ 596
+ G +G L V Q
Sbjct: 385 AISGLAKNGHVKLSFAVFGQ 404
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 132/333 (39%), Gaps = 14/333 (4%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
H++FD+ P+ + W L + ++ AI F +M+ V A
Sbjct: 166 HKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHV 225
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
D G+ + + ++ + + L++LYA + A+++FD W+ +
Sbjct: 226 GDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMI 285
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
+ Y P+ +ELF +M+ +G+L G + +
Sbjct: 286 QGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFL 345
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
+F +N+L+ MY CG+M VF++M KD+V + I G +NG + + +F +
Sbjct: 346 TNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQT 405
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNT------LLK 347
E L + PD +L C G ++ G N + C L T ++
Sbjct: 406 --EKLGISPDGSTFLGLLCGCVHAGLIQDGLRFF-----NAISCVYALKRTVEHYGCMVD 458
Query: 348 MYADCGASRDARLVFEQMPSK-TVVSWTSMIRG 379
++ G DA + MP + + W +++ G
Sbjct: 459 LWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 140/313 (44%), Gaps = 14/313 (4%)
Query: 319 SLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIR 378
++ H ++IH L+ + + D L N LLK ++ + L+F + + S+I
Sbjct: 25 TVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLIN 84
Query: 379 GYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVE 438
G+V F+ E LF + GL + +L AC R +S K G ++H +++ G
Sbjct: 85 GFVNNHLFH-ETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFN 143
Query: 439 FDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQL 498
D+ +++ +Y SG + A +F E+ ++ ++W+ + G + G+ + +DLF+++
Sbjct: 144 HDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKM 203
Query: 499 ERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRGPMIAHCA----QKVSLLARCGL 554
P D L AC + G ++ + + V+L A+CG
Sbjct: 204 VEMGVKP-DSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGK 262
Query: 555 FDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCEL--EPLNAENY--VL 610
++A + + +E+ +++G + + K+ IE ++ E L + + V
Sbjct: 263 MEKARS-VFDSMVEKDIVTWSTMIQG---YASNSFPKEGIELFLQMLQENLKPDQFSIVG 318
Query: 611 LLNWHAGKGKLDM 623
L+ A G LD+
Sbjct: 319 FLSSCASLGALDL 331
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 333 bits (854), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 208/729 (28%), Positives = 349/729 (47%), Gaps = 16/729 (2%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHA--VXXXXXXXXXXXXASRLA 113
+FD P+ + W L+ + N+HF A F QM R + A
Sbjct: 101 LFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDA 160
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIA--LIHLYASLDDIAVAQTLFDKTAPFGSDCWTF 171
+ Q+H AVKL + ++ L+ Y + + +A LF++ S +
Sbjct: 161 VPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNT 220
Query: 172 LAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLG 231
L Y +G+ ++ LF +M + G+ +H ++V G
Sbjct: 221 LITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTG 280
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFR 291
+ N +L Y + + R++F++MP D VS+ +I Q + ++ FR
Sbjct: 281 FSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFR 340
Query: 292 RMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYAD 351
M G + +T+L + + SL+ GR++H + + + + N+L+ MYA
Sbjct: 341 EMQCMGFDRRN--FPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAK 398
Query: 352 CGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISS 411
C +A L+F+ +P +T VSWT++I GYV+KG + +LF KM L+ + ++
Sbjct: 399 CEMFEEAELIFKSLPQRTTVSWTALISGYVQKG-LHGAGLKLFTKMRGSNLRADQSTFAT 457
Query: 412 ILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKD 471
+L A AS G+++H +++R+G ++ + ++DMY K G+I A+ VF EM +++
Sbjct: 458 VLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRN 517
Query: 472 TISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCF 531
+SW+ +I + +G G+ + F ++ + P D L ACS E+G F
Sbjct: 518 AVSWNALISAHADNGDGEAAIGAFAKMIESGLQP-DSVSILGVLTACSHCGFVEQGTEYF 576
Query: 532 NHIR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGE 586
+ P H A + LL R G F EA + E E + +L CRIH
Sbjct: 577 QAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKN 636
Query: 587 YALGKQVIEQLCELEPL-NAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWT 645
+L ++ E+L +E L +A YV + N +A G+ + V +++ +RERG+K A +W
Sbjct: 637 QSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWV 696
Query: 646 LYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEERECTQIE- 704
K+HVF + D +HP EI + E+ EG +P + DVDE+ + ++
Sbjct: 697 EVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKY 756
Query: 705 HSELLALAFGLISSQAG-PIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKH 763
HSE LA+AF LIS+ G PI + KN R CR CH K +SK+ REI ++D + FHHF
Sbjct: 757 HSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSE 816
Query: 764 GHCTCEDFW 772
G C+C D+W
Sbjct: 817 GVCSCGDYW 825
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 135/264 (51%), Gaps = 3/264 (1%)
Query: 238 ASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEG 297
++N+++ +V G + AR +F+ MP + VV+WT ++ +N EA +LFR+M
Sbjct: 81 STNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSS 140
Query: 298 LSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLL--SNTLLKMYADCGAS 355
PD V +T+LP C ++H + V+ G + + L SN LLK Y +
Sbjct: 141 SCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRL 200
Query: 356 RDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPA 415
A ++FE++P K V++ ++I GY +K G E LF KM G +P+ + S +L A
Sbjct: 201 DLACVLFEEIPEKDSVTFNTLITGY-EKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Query: 416 CGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISW 475
+ G+++H + G D +V N ++D Y K + +F EM E D +S+
Sbjct: 260 VVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSY 319
Query: 476 SMMIFGCSLHGQGKLGVDLFRQLE 499
+++I S Q + + FR+++
Sbjct: 320 NVVISSYSQADQYEASLHFFREMQ 343
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 333 bits (853), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 204/634 (32%), Positives = 322/634 (50%), Gaps = 20/634 (3%)
Query: 154 AQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXM 213
A +FDK + WT + + G PR A+ F MV
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Query: 214 MGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDC---GSMRDARLVFEKMPCKDVVSW 270
+ +L G+ +H A++ GL +V SL+ MY C GS+ D R VF++M V+SW
Sbjct: 282 LENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339
Query: 271 TSMIRGCVQNGEL-SEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGY 329
T++I G ++N L +EA+ LF M +G V+P+ S+ CG + + G+++ G
Sbjct: 340 TALITGYMKNCNLATEAINLFSEMITQG-HVEPNHFTFSSAFKACGNLSDPRVGKQVLGQ 398
Query: 330 LVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNE 389
+ G+ + ++N+++ M+ DA+ FE + K +VS+ + + G + F +
Sbjct: 399 AFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFE-Q 457
Query: 390 VFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVID 449
F+L ++ L +A + +S+L + S + G +IH +++ G+ + V NA+I
Sbjct: 458 AFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALIS 517
Query: 450 MYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDN 509
MY K G+I A VF M ++ ISW+ MI G + HG ++ F Q+ P ++
Sbjct: 518 MYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKP-NEV 576
Query: 510 IYAAALHACSTARMFEEGRVCFN-----HIRGPMIAHCAQKVSLLARCGLFDEAMVFIRE 564
Y A L ACS + EG FN H P + H A V LL R GL +A FI
Sbjct: 577 TYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINT 636
Query: 565 QKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMV 624
+ V R L CR+H LGK ++ EL+P Y+ L N +A GK +
Sbjct: 637 MPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEES 696
Query: 625 DKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVE 684
++R ++ER L + C+W +K+H F GD +HP +I L + E++ G
Sbjct: 697 TEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYV 756
Query: 685 PKWDFSLHDVDEERECTQ-----IEHSELLALAFGLIS-SQAGPIRLEKNSRVCRGCHDF 738
P D LH ++EE + + +HSE +A+AFGLIS S++ P+R+ KN RVC CH+
Sbjct: 757 PDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNA 816
Query: 739 AKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
K++S V+GREI+L+D N FHHFK G C+C D+W
Sbjct: 817 MKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 133/507 (26%), Positives = 229/507 (45%), Gaps = 25/507 (4%)
Query: 69 NTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA-DFSLGKQLHTHAV 127
+ LI HL+ A+S M R + S + A DF LGK +H +
Sbjct: 30 DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI 89
Query: 128 KLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSD---CWTFLAKLYVLEGMPRS 184
+ + + +LI LY+ D A A+ +F+ FG W+ + Y G
Sbjct: 90 EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD 149
Query: 185 ALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLG-LEGEVFASNSLL 243
A+++F + + GR +K G E +V SL+
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209
Query: 244 KMYVDC-GSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKP 302
M+V S +A VF+KM +VV+WT MI C+Q G EA+ F M L G +
Sbjct: 210 DMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGF--ES 267
Query: 303 DLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADC---GASRDAR 359
D +S+V C + +L G+++H + +R+G+ DV S L+ MYA C G+ D R
Sbjct: 268 DKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDCR 325
Query: 360 LVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEG-LKPTAVSISSILPACGR 418
VF++M +V+SWT++I GY+K E LF +M ++G ++P + SS ACG
Sbjct: 326 KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Query: 419 IASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMM 478
++ + G+++ G + G+ + +V+N+VI M+VKS + A F ++EK+ +S++
Sbjct: 386 LSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTF 445
Query: 479 IFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHI---- 534
+ G + + L ++ E + +A+ L + +G + +
Sbjct: 446 LDGTCRNLNFEQAFKLLSEITER-ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLG 504
Query: 535 ---RGPMIAHCAQKVSLLARCGLFDEA 558
P+ C +S+ ++CG D A
Sbjct: 505 LSCNQPV---CNALISMYSKCGSIDTA 528
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 208/477 (43%), Gaps = 25/477 (5%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPL-AISTFTQMLRHAVXXXXXXXXXXXXASRL 112
++VFDK E + + W TL+ T FP AI F M+ A
Sbjct: 223 YKVFDKMSELNVVTW-TLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Query: 113 AADFSLGKQLHTHAVKLALSSRAHTLIALIHLYA------SLDDIAVAQTLFDKTAPFGS 166
+ SLGKQLH+ A++ L +L+ +YA S+DD + +FD+
Sbjct: 282 LENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDD---CRKVFDRMEDHSV 336
Query: 167 DCWTFLAKLYVLE-GMPRSALELFHRMVXXXXXXXXXXXXXXXXXX-XMMGSLRQGRDVH 224
WT L Y+ + A+ LF M+ + R G+ V
Sbjct: 337 MSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVL 396
Query: 225 LIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELS 284
A K GL +NS++ M+V M DA+ FE + K++VS+ + + G +N
Sbjct: 397 GQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFE 456
Query: 285 EAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNT 344
+A +L + L V +++L +GS++ G +IH +V+ G+ C+ + N
Sbjct: 457 QAFKLLSEITERELGVSA--FTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNA 514
Query: 345 LLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKP 404
L+ MY+ CG+ A VF M ++ V+SWTSMI G+ K GF V F +M EG+KP
Sbjct: 515 LISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKH-GFAIRVLETFNQMIEEGVKP 573
Query: 405 TAVSISSILPACGRIASHKHG-REIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNV 463
V+ +IL AC + G R + + ++ + ++D+ ++G + A
Sbjct: 574 NEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEF 633
Query: 464 FGEMN-EKDTISWSMMIFGCSLHGQ---GKLGVDLFRQLERNSEAPLD--DNIYAAA 514
M + D + W + C +H GKL +L+ N A NIYA A
Sbjct: 634 INTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACA 690
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 330 bits (845), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 224/765 (29%), Positives = 344/765 (44%), Gaps = 112/765 (14%)
Query: 116 FSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKL 175
L + +H + + RAH L LI +Y ++ A+ LFD+ + T +
Sbjct: 30 LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSG 89
Query: 176 Y-----------VLEGMP----------------------RSALELFHRMVXXXXXXXXX 202
Y V E P SA+ LF +M
Sbjct: 90 YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149
Query: 203 XXXXXXXXXXMMGS-LRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGS----MRDARL 257
++ +Q H A+K G SN+L+ +Y C S + AR
Sbjct: 150 TFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARK 209
Query: 258 VFEKMPCKDVVSWTSMIRGCVQNGEL--------------------------------SE 285
VF+++ KD SWT+M+ G V+NG E
Sbjct: 210 VFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQE 269
Query: 286 AMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTL 345
A+E+ RRM G+ + D +V+ C G L+ G+++H Y++R + N+L
Sbjct: 270 ALEMVRRMVSSGIEL--DEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSL 326
Query: 346 LKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKG--------------------- 384
+ +Y CG +AR +FE+MP+K +VSW +++ GYV G
Sbjct: 327 VSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWM 386
Query: 385 ---------GFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRN 435
GF E +LF M EG +P + S + +C + ++ +G++ H LL+
Sbjct: 387 IMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKI 446
Query: 436 GVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLF 495
G + ++ NA+I MY K G + A VF M D++SW+ +I HG G VD++
Sbjct: 447 GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVY 506
Query: 496 RQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLA 550
++ + P D L ACS A + ++GR F+ + P H A+ + LL
Sbjct: 507 EEMLKKGIRP-DRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLC 565
Query: 551 RCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVL 610
R G F +A I + E+ LL GCR+HG LG ++L L P + Y+L
Sbjct: 566 RSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYML 625
Query: 611 LLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSA 670
L N HA G+ + V ++R+ +R+RG+K + AC+W +VH F D SHP + +
Sbjct: 626 LSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIY 685
Query: 671 LQGFMEEMRTEGVEPKWDFSLHDV--DEERECTQIEHSELLALAFGLISSQAG-PIRLEK 727
LQ +EMR G P F LHDV D +E HSE +A+AFGL+ G IR+ K
Sbjct: 686 LQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFK 745
Query: 728 NSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
N R C CH+F +F+S V R+IIL+D FHHF++G C+C +FW
Sbjct: 746 NLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 210/717 (29%), Positives = 339/717 (47%), Gaps = 12/717 (1%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAAD 115
+FD+ E DT++WN++ + N H + F+ M R
Sbjct: 200 IFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDH 259
Query: 116 FSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKL 175
G+ +H VK+ S L+ +YA A +F + W L
Sbjct: 260 QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMAS 319
Query: 176 YVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGE 235
+V +G AL L M+ +GR +H + V GL
Sbjct: 320 FVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYN 379
Query: 236 VFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNL 295
N+L+ MY G M ++R V +MP +DVV+W ++I G ++ + +A+ F+ M +
Sbjct: 380 QIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRV 439
Query: 296 EGLSVKPDLVMVSTVLPVCGMIGSL-KHGREIHGYLVRNGVECDVLLSNTLLKMYADCGA 354
EG+S + + V +VL C + G L + G+ +H Y+V G E D + N+L+ MYA CG
Sbjct: 440 EGVS--SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGD 497
Query: 355 SRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILP 414
++ +F + ++ +++W +M+ G EV +L KM S G+ S S L
Sbjct: 498 LSSSQDLFNGLDNRNIITWNAMLAANAHHG-HGEEVLKLVSKMRSFGVSLDQFSFSEGLS 556
Query: 415 ACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTIS 474
A ++A + G+++HG ++ G E D + NA DMY K G I + + + S
Sbjct: 557 AAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPS 616
Query: 475 WSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHI 534
W+++I HG + F ++ P + + L ACS + ++G ++ I
Sbjct: 617 WNILISALGRHGYFEEVCATFHEMLEMGIKP-GHVTFVSLLTACSHGGLVDKGLAYYDMI 675
Query: 535 R-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYAL 589
P I HC + LL R G EA FI + ++ + V R LL C+IHG
Sbjct: 676 ARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDR 735
Query: 590 GKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYRE 649
G++ E L +LEP + YVL N A G+ + V+ +R+ + + +K K+AC+W ++
Sbjct: 736 GRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKD 795
Query: 650 KVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEE-RECTQIEHSEL 708
KV FG GD +HP+ EI + L+ + ++ G +L D DEE +E HSE
Sbjct: 796 KVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSER 855
Query: 709 LALAFGLISSQAGP-IRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHG 764
LALA+ L+S+ G +R+ KN R+C CH KFVS+V GR I+L+D FHHF+ G
Sbjct: 856 LALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERG 912
Score = 172 bits (436), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 202/425 (47%), Gaps = 10/425 (2%)
Query: 61 PEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXA-SRLAADFSLG 119
P + ++WNT++ + + + F +M + A R + F G
Sbjct: 2 PVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREG 61
Query: 120 KQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLE 179
Q+H K L S + A++HLY ++ ++ +F++ WT L Y +
Sbjct: 62 VQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDK 121
Query: 180 GMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFAS 239
G P ++++ M ++ GR + VK GLE ++
Sbjct: 122 GEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 181
Query: 240 NSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELF---RRMNLE 296
NSL+ M G++ A +F++M +D +SW S+ QNG + E+ +F RR + E
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 241
Query: 297 GLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASR 356
+ VST+L V G + K GR IHG +V+ G + V + NTLL+MYA G S
Sbjct: 242 -----VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 296
Query: 357 DARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPAC 416
+A LVF+QMP+K ++SW S++ +V G + + L M S G V+ +S L AC
Sbjct: 297 EANLVFKQMPTKDLISWNSLMASFVNDGR-SLDALGLLCSMISSGKSVNYVTFTSALAAC 355
Query: 417 GRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWS 476
+ GR +HG ++ +G+ ++ + NA++ MY K G ++ + V +M +D ++W+
Sbjct: 356 FTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWN 415
Query: 477 MMIFG 481
+I G
Sbjct: 416 ALIGG 420
Score = 159 bits (402), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 178/362 (49%), Gaps = 5/362 (1%)
Query: 169 WTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSL-RQGRDVHLIA 227
W + V G+ +E F +M GS+ R+G VH
Sbjct: 9 WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 68
Query: 228 VKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAM 287
K GL +V+ S ++L +Y G + +R VFE+MP ++VVSWTS++ G GE E +
Sbjct: 69 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 128
Query: 288 ELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLK 347
++++ M EG+ + +S V+ CG++ GR+I G +V++G+E + + N+L+
Sbjct: 129 DIYKGMRGEGVGCNEN--SMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLIS 186
Query: 348 MYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAV 407
M G A +F+QM + +SW S+ Y + G E FR+F M + +
Sbjct: 187 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHI-EESFRIFSLMRRFHDEVNST 245
Query: 408 SISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEM 467
++S++L G + K GR IHG +++ G + + V N ++ MY +G A VF +M
Sbjct: 246 TVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM 305
Query: 468 NEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEG 527
KD ISW+ ++ G+ + L + +S ++ + +AL AC T FE+G
Sbjct: 306 PTKDLISWNSLMASFVNDGRSLDALGLLCSM-ISSGKSVNYVTFTSALAACFTPDFFEKG 364
Query: 528 RV 529
R+
Sbjct: 365 RI 366
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 140/240 (58%), Gaps = 4/240 (1%)
Query: 262 MPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSL- 320
MP ++ VSW +M+ G V+ G E ME FR+M L +KP ++++++ CG GS+
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMC--DLGIKPSSFVIASLVTACGRSGSMF 58
Query: 321 KHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGY 380
+ G ++HG++ ++G+ DV +S +L +Y G +R VFE+MP + VVSWTS++ GY
Sbjct: 59 REGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY 118
Query: 381 VKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFD 440
KG EV +++ M EG+ S+S ++ +CG + GR+I G ++++G+E
Sbjct: 119 SDKGE-PEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESK 177
Query: 441 INVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLER 500
+ V N++I M G + A +F +M+E+DTISW+ + + +G + +F + R
Sbjct: 178 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 237
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 327 bits (837), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 210/670 (31%), Positives = 330/670 (49%), Gaps = 14/670 (2%)
Query: 113 AADFSLGKQLHTHAVKLALSSRAHTLIA--LIHLYASLDDIAVAQTLFDKTAPFGSDCWT 170
A+ LG+ +H VK L S +A LI++Y+ LD A+ + T WT
Sbjct: 19 ASSMRLGRVVHARIVK-TLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWT 77
Query: 171 FLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKL 230
L G +AL F M + G+ +H +AVK
Sbjct: 78 SLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKC 137
Query: 231 GLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELF 290
G +VF S MY DAR +F+++P +++ +W + I V +G EA+E F
Sbjct: 138 GRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAF 197
Query: 291 RRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYA 350
+ + P+ + L C L G ++HG ++R+G + DV + N L+ Y
Sbjct: 198 --IEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYG 255
Query: 351 DCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSIS 410
C R + ++F +M +K VSW S++ YV+ + + L+ + + ++ + IS
Sbjct: 256 KCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE-DEKASVLYLRSRKDIVETSDFMIS 314
Query: 411 SILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK 470
S+L AC +A + GR IH + ++ VE I V +A++DMY K G I + F EM EK
Sbjct: 315 SVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK 374
Query: 471 DTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNI-YAAALHACSTARMFEEGRV 529
+ ++ + +I G + GQ + + LF ++ P + + + + L ACS A E G
Sbjct: 375 NLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMK 434
Query: 530 CFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIH 584
F+ +R P H + V +L R G+ + A FI++ I+ V L CR+H
Sbjct: 435 IFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMH 494
Query: 585 GEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTW 644
G+ LG E L +L+P ++ N+VLL N A G+ + +RE ++ G+K +W
Sbjct: 495 GKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSW 554
Query: 645 TLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEERECTQIE 704
+ +VH F D SH KEI + L EM G +P SL+D++EE + ++
Sbjct: 555 ITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVS 614
Query: 705 -HSELLALAFGLIS-SQAGPIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFK 762
HSE LALAFGL+S + PIR+ KN R+C CH F KFVS REII++D N FH FK
Sbjct: 615 HHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFK 674
Query: 763 HGHCTCEDFW 772
G C+C+D+W
Sbjct: 675 DGICSCKDYW 684
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 205/468 (43%), Gaps = 12/468 (2%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAAD 115
V +P + ++W +LI N HF A+ F +M R V A
Sbjct: 64 VLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRL 123
Query: 116 FSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKL 175
GKQ+H AVK + +Y A+ LFD+ + W
Sbjct: 124 PVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISN 183
Query: 176 YVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGE 235
V +G PR A+E F L G +H + ++ G + +
Sbjct: 184 SVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTD 243
Query: 236 VFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNL 295
V N L+ Y C +R + ++F +M K+ VSW S++ VQN E +A L+ R
Sbjct: 244 VSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRK 303
Query: 296 EGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGAS 355
+ V+ M+S+VL C + L+ GR IH + V+ VE + + + L+ MY CG
Sbjct: 304 D--IVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCI 361
Query: 356 RDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTA--VSISSIL 413
D+ F++MP K +V+ S+I GY +G + LF +M G PT ++ S+L
Sbjct: 362 EDSEQAFDEMPEKNLVTRNSLIGGYAHQGQV-DMALALFEEMAPRGCGPTPNYMTFVSLL 420
Query: 414 PACGRIASHKHGREIHGYLLRN-GVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDT 472
AC R + ++G +I + G+E + ++DM ++G + A +M + T
Sbjct: 421 SACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPT 480
Query: 473 IS-WSMMIFGCSLHGQGKLGV----DLFRQLERNS-EAPLDDNIYAAA 514
IS W + C +HG+ +LG+ +LF+ ++S L N +AAA
Sbjct: 481 ISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAA 528
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 154/400 (38%), Gaps = 9/400 (2%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
++FD+ PE + WN I +++ AI F + R A
Sbjct: 164 KLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWL 223
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
+LG QLH ++ + LI Y I ++ +F + + W L
Sbjct: 224 HLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVA 283
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
YV A L+ R M L GR +H AVK +E
Sbjct: 284 AYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVER 343
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
+F ++L+ MY CG + D+ F++MP K++V+ S+I G G++ A+ LF M
Sbjct: 344 TIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMA 403
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN-GVECDVLLSNTLLKMYADCG 353
G P+ + ++L C G++++G +I + G+E + ++ M G
Sbjct: 404 PRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAG 463
Query: 354 ASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKP----TAVSI 409
A ++MP + +S ++ + G L N L P V +
Sbjct: 464 MVERAYEFIKKMPIQPTISVWGALQNACRMHG--KPQLGLLAAENLFKLDPKDSGNHVLL 521
Query: 410 SSILPACGRIASHKHGR-EIHGYLLRNGVEFD-INVSNAV 447
S+ A GR A R E+ G ++ G + I V N V
Sbjct: 522 SNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQV 561
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 326 bits (835), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 175/542 (32%), Positives = 297/542 (54%), Gaps = 10/542 (1%)
Query: 238 ASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEG 297
+SN L+ YV G + +AR VF++MP + + +W +MI G +Q E + LFR M+ G
Sbjct: 27 SSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMH--G 84
Query: 298 LSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRD 357
L PD + +V + S+ G++IHGY ++ G+E D++++++L MY G +D
Sbjct: 85 LGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQD 144
Query: 358 ARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACG 417
+V MP + +V+W ++I G + G V L++ M G +P ++ ++L +C
Sbjct: 145 GEIVIRSMPVRNLVAWNTLIMGNAQNG-CPETVLYLYKMMKISGCRPNKITFVTVLSSCS 203
Query: 418 RIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSM 477
+A G++IH ++ G + V +++I MY K G + A F E ++D + WS
Sbjct: 204 DLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSS 263
Query: 478 MIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR-- 535
MI HGQG ++LF + + +++ + L+ACS + + ++G F+ +
Sbjct: 264 MISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEK 323
Query: 536 ---GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQ 592
P + H V LL R G D+A IR I+ + + LL C IH + ++
Sbjct: 324 YGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQR 383
Query: 593 VIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVH 652
V +++ +++P ++ YVLL N HA + V ++R+++R++ +K + +W ++ +VH
Sbjct: 384 VFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVH 443
Query: 653 VFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVD-EERECTQIEHSELLAL 711
F GD S + KEI S L+ EM+ +G +P LHD+D EE+E ++HSE LA+
Sbjct: 444 QFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAV 503
Query: 712 AFGL-ISSQAGPIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCED 770
AF L I + PIR+ KN RVC CH K++S + REI L+D + FHHF +G C+C D
Sbjct: 504 AFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGD 563
Query: 771 FW 772
+W
Sbjct: 564 YW 565
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 171/382 (44%), Gaps = 11/382 (2%)
Query: 141 LIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXX 200
LI+ Y D+ A+ +FD+ W + + L LF M
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 201 XXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFE 260
+ S+ G+ +H +K GLE ++ ++SL MY+ G ++D +V
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150
Query: 261 KMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSL 320
MP +++V+W ++I G QNG + L++ M + G +P+ + TVL C +
Sbjct: 151 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISG--CRPNKITFVTVLSSCSDLAIR 208
Query: 321 KHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGY 380
G++IH ++ G V + ++L+ MY+ CG DA F + + V W+SMI Y
Sbjct: 209 GQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAY 268
Query: 381 VKKGGFNNEVFRLFRKMNSE-GLKPTAVSISSILPACGRIASHKHGREIHGYLL-RNGVE 438
G +E LF M + ++ V+ ++L AC G E+ ++ + G +
Sbjct: 269 GFHGQ-GDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFK 327
Query: 439 FDINVSNAVIDMYVKSGAIACALNVFGEMNEK-DTISWSMMIFGCSLHGQGKLGVDLFR- 496
+ V+D+ ++G + A + M K D + W ++ C++H ++ +F+
Sbjct: 328 PGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKE 387
Query: 497 --QLERNSEA--PLDDNIYAAA 514
Q++ N A L N++A+A
Sbjct: 388 ILQIDPNDSACYVLLANVHASA 409
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 124/325 (38%), Gaps = 3/325 (0%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VFD+ P+ WN +I + +S F +M S
Sbjct: 46 KVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLR 105
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
S+G+Q+H + +K L +L H+Y + + + W L
Sbjct: 106 SVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIM 165
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
G P + L L+ M + QG+ +H A+K+G
Sbjct: 166 GNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASS 225
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
V +SL+ MY CG + DA F + +D V W+SMI +G+ EA+ELF M
Sbjct: 226 VVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTM- 284
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLV-RNGVECDVLLSNTLLKMYADCG 353
E +++ + V +L C G G E+ +V + G + + ++ + G
Sbjct: 285 AEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAG 344
Query: 354 ASRDARLVFEQMPSKT-VVSWTSMI 377
A + MP KT +V W +++
Sbjct: 345 CLDQAEAIIRSMPIKTDIVIWKTLL 369
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 146/340 (42%), Gaps = 59/340 (17%)
Query: 346 LKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGG-------------------- 385
+ MY+ G A V+ +M K +S +I GYV+ G
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 386 ----------FNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRN 435
FN E LFR+M+ G P ++ S+ + S G++IHGY ++
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 436 GVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLF 495
G+E D+ V++++ MY+++G + V M ++ ++W+ +I G + +G + + L+
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 496 RQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRGPMIAHCAQK------VSLL 549
+ ++ + P + + L +CS + +G+ H I + +S+
Sbjct: 181 KMMKISGCRP-NKITFVTVLSSCSDLAIRGQGQQI--HAEAIKIGASSVVAVVSSLISMY 237
Query: 550 ARCGLFDEAMVFIREQKIEQHPEVL-RKLLEGCRIHGEYALGKQVIEQLCEL-EPLNAE- 606
++CG +A E+ E EV+ ++ HG+ G + IE + E N E
Sbjct: 238 SKCGCLGDAAKAFSER--EDEDEVMWSSMISAYGFHGQ---GDEAIELFNTMAEQTNMEI 292
Query: 607 NYVLLLNW-----HAG---KGKLDMVDKIRETIRERGLKP 638
N V LN H+G KG L++ D + + + G KP
Sbjct: 293 NEVAFLNLLYACSHSGLKDKG-LELFDMM---VEKYGFKP 328
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 182/552 (32%), Positives = 299/552 (54%), Gaps = 10/552 (1%)
Query: 217 LRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRG 276
L QGR VH ++ ++ N+LL MY CGS+ +AR VFEKMP +D V+WT++I G
Sbjct: 76 LIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISG 135
Query: 277 CVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVE 336
Q+ +A+ F +M G S P+ +S+V+ G ++HG+ V+ G +
Sbjct: 136 YSQHDRPCDALLFFNQMLRFGYS--PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFD 193
Query: 337 CDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRK 396
+V + + LL +Y G DA+LVF+ + S+ VSW ++I G+ ++ G + LF+
Sbjct: 194 SNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG-TEKALELFQG 252
Query: 397 MNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGA 456
M +G +P+ S +S+ AC + G+ +H Y++++G + N ++DMY KSG+
Sbjct: 253 MLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGS 312
Query: 457 IACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALH 516
I A +F + ++D +SW+ ++ + HG GK V F ++ R P ++ + + L
Sbjct: 313 IHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP-NEISFLSVLT 371
Query: 517 ACSTARMFEEGRVCFNHIRG----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPE 572
ACS + + +EG + ++ P H V LL R G + A+ FI E IE
Sbjct: 372 ACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAA 431
Query: 573 VLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIR 632
+ + LL CR+H LG E + EL+P + +V+L N +A G+ + ++R+ ++
Sbjct: 432 IWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMK 491
Query: 633 ERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLH 692
E G+K + AC+W +H+F D HP+++EI + + +++ G P +
Sbjct: 492 ESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIV 551
Query: 693 DVD-EERECTQIEHSELLALAFGLISSQAGP-IRLEKNSRVCRGCHDFAKFVSKVTGREI 750
VD +ERE HSE +ALAF L+++ G I ++KN RVC CH K SKV GREI
Sbjct: 552 HVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREI 611
Query: 751 ILKDPNFFHHFK 762
I++D N FHHFK
Sbjct: 612 IVRDTNRFHHFK 623
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 187/411 (45%), Gaps = 9/411 (2%)
Query: 119 GKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVL 178
G+ +H H ++ L+++YA + A+ +F+K WT L Y
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 179 EGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFA 238
P AL F++M+ G +H VK G + V
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 198
Query: 239 SNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGL 298
++LL +Y G M DA+LVF+ + ++ VSW ++I G + +A+ELF+ M +G
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258
Query: 299 SVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDA 358
+P +++ C G L+ G+ +H Y++++G + NTLL MYA G+ DA
Sbjct: 259 --RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDA 316
Query: 359 RLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGR 418
R +F+++ + VVSW S++ Y + GF E F +M G++P +S S+L AC
Sbjct: 317 RKIFDRLAKRDVVSWNSLLTAYAQH-GFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSH 375
Query: 419 IASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTIS-WSM 477
G + + ++G+ + V+D+ ++G + AL EM + T + W
Sbjct: 376 SGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKA 435
Query: 478 MIFGCSLHGQGKLG---VDLFRQLERNSEAP--LDDNIYAAALHACSTARM 523
++ C +H +LG + +L+ + P + NIYA+ AR+
Sbjct: 436 LLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARV 486
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 117/478 (24%), Positives = 220/478 (46%), Gaps = 44/478 (9%)
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCG 353
+LEG + D +T+L C + L GR +H +++++ D+++ NTLL MYA CG
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 354 ASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSIL 413
+ +AR VFE+MP + V+WT++I GY + + + F +M G P ++SS++
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALL-FFNQMLRFGYSPNEFTLSSVI 168
Query: 414 PACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTI 473
A G ++HG+ ++ G + +++V +A++D+Y + G + A VF + ++ +
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228
Query: 474 SWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNH 533
SW+ +I G + + ++LF+ + R+ P + YA+ ACS+ E+G+
Sbjct: 229 SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFS-YASLFGACSSTGFLEQGKW---- 283
Query: 534 IRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRI--------HG 585
+ MI +K+ A L D ++ + I ++ +L + + +
Sbjct: 284 VHAYMIK-SGEKLVAFAGNTLLD---MYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYA 339
Query: 586 EYALGKQVIEQLCELEPL----NAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKA 641
++ GK+ + E+ + N +++ +L + G LD E +++ G+ P+
Sbjct: 340 QHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPE-- 397
Query: 642 CTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEERECT 701
W Y V + G R ++ AL+ F+EEM E W L+ C
Sbjct: 398 -AWH-YVTVVDLLG-------RAGDLNRALR-FIEEMPIEPTAAIWKALLN------ACR 441
Query: 702 QIEHSELLALA----FGLISSQAGPIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDP 755
+++EL A A F L GP + N G + A V K + K+P
Sbjct: 442 MHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEP 499
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 136/324 (41%), Gaps = 3/324 (0%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VF+K P+ D + W TLI + ++ A+ F QMLR A+
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
G QLH VK S H AL+ LY + AQ +FD W L
Sbjct: 176 RGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIA 235
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
+ ALELF M+ G L QG+ VH +K G +
Sbjct: 236 GHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 295
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
FA N+LL MY GS+ DAR +F+++ +DVVSW S++ Q+G EA+ F M
Sbjct: 296 VAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR 355
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGA 354
G ++P+ + +VL C G L G + + ++G+ + T++ + G
Sbjct: 356 RVG--IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGD 413
Query: 355 SRDARLVFEQMP-SKTVVSWTSMI 377
A E+MP T W +++
Sbjct: 414 LNRALRFIEEMPIEPTAAIWKALL 437
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 323 bits (827), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 192/594 (32%), Positives = 311/594 (52%), Gaps = 39/594 (6%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIR 275
+L +G+ VH G + N LL+MY CGS+ DAR VF++MP +D+ SW M+
Sbjct: 100 ALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVN 159
Query: 276 GCVQNGELSEAMELFRRMNL--------------------EGL----------SVKPDLV 305
G + G L EA +LF M E L + +P++
Sbjct: 160 GYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIF 219
Query: 306 MVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQM 365
VS + + ++ G+EIHG++VR G++ D +L ++L+ MY CG +AR +F+++
Sbjct: 220 TVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI 279
Query: 366 PSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHG 425
K VVSWTSMI Y K + E F LF ++ +P + + +L AC + + + G
Sbjct: 280 VEKDVVSWTSMIDRYFKSSRWR-EGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELG 338
Query: 426 REIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLH 485
+++HGY+ R G + S++++DMY K G I A +V + D +SW+ +I GC+ +
Sbjct: 339 KQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQN 398
Query: 486 GQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRGP-MIAHCAQ 544
GQ + F L ++ P D + L AC+ A + E+G F I ++H +
Sbjct: 399 GQPDEALKYFDLLLKSGTKP-DHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSD 457
Query: 545 K----VSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCEL 600
V LLAR G F++ I E ++ + +L GC +G L ++ ++L ++
Sbjct: 458 HYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKI 517
Query: 601 EPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVS 660
EP N YV + N +A GK + K+R+ ++E G+ + +WT + K HVF D S
Sbjct: 518 EPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTS 577
Query: 661 HPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDV-DEERECTQIEHSELLALAFGLISSQ 719
HP +I L+ ++M+ EG P LHDV DE++E + HSE LA+AF ++S++
Sbjct: 578 HPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTE 637
Query: 720 AG-PIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
G I++ KN R C CH KF+S +T R+I ++D FH F++G C+C D+W
Sbjct: 638 EGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 182/393 (46%), Gaps = 33/393 (8%)
Query: 141 LIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXX 200
+++ YA + + A+ LFD+ S WT + YV + P AL L+ M
Sbjct: 157 MVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRP 216
Query: 201 XXXXXXXXXXXXMMGS-LRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVF 259
+R+G+++H V+ GL+ + +SL+ MY CG + +AR +F
Sbjct: 217 NIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIF 276
Query: 260 EKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGS 319
+K+ KDVVSWTSMI ++ E LF L G +P+ + VL C + +
Sbjct: 277 DKIVEKDVVSWTSMIDRYFKSSRWREGFSLFS--ELVGSCERPNEYTFAGVLNACADLTT 334
Query: 320 LKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRG 379
+ G+++HGY+ R G + S++L+ MY CG A+ V + P +VSWTS+I G
Sbjct: 335 EELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGG 394
Query: 380 YVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEF 439
+ G +E + F + G KP V+ ++L AC H L+ G+EF
Sbjct: 395 CAQNGQ-PDEALKYFDLLLKSGTKPDHVTFVNVLSAC-----------THAGLVEKGLEF 442
Query: 440 DINVS------------NAVIDMYVKSGAIACALNVFGEMNEKDT-ISWSMMIFGCSLHG 486
+++ ++D+ +SG +V EM K + W+ ++ GCS +G
Sbjct: 443 FYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYG 502
Query: 487 QGKLGVDLFRQLER-NSEAPLD----DNIYAAA 514
L + ++L + E P+ NIYAAA
Sbjct: 503 NIDLAEEAAQELFKIEPENPVTYVTMANIYAAA 535
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 147/312 (47%), Gaps = 44/312 (14%)
Query: 283 LSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLS 342
L EA++L G + KP ++ VC +L+ G+++H ++ +G +++
Sbjct: 70 LREAVQLL------GRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIW 123
Query: 343 NTLLKMYADCGASRDARLVFEQMPS-------------------------------KTVV 371
N LL+MYA CG+ DAR VF++MP+ K
Sbjct: 124 NRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSY 183
Query: 372 SWTSMIRGYVKKGGFNNEVFRLFRKMNS-EGLKPTAVSISSILPACGRIASHKHGREIHG 430
SWT+M+ GYVKK E L+ M +P ++S + A + + G+EIHG
Sbjct: 184 SWTAMVTGYVKKDQ-PEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHG 242
Query: 431 YLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKL 490
+++R G++ D + ++++DMY K G I A N+F ++ EKD +SW+ MI + +
Sbjct: 243 HIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWRE 302
Query: 491 GVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR----GPMIAHCAQKV 546
G LF +L + E P ++ +A L+AC+ E G+ ++ P + V
Sbjct: 303 GFSLFSELVGSCERP-NEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLV 361
Query: 547 SLLARCGLFDEA 558
+ +CG + A
Sbjct: 362 DMYTKCGNIESA 373
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 156/374 (41%), Gaps = 18/374 (4%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
++FD+ E D+ +W ++ ++ + A+ ++ M R A+ A
Sbjct: 172 KLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAV 231
Query: 115 D-FSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
GK++H H V+ L S +L+ +Y I A+ +FDK WT +
Sbjct: 232 KCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMI 291
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
Y R LF +V + + G+ VH ++G +
Sbjct: 292 DRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFD 351
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
FAS+SL+ MY CG++ A+ V + P D+VSWTS+I GC QNG+ EA++ F +
Sbjct: 352 PYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLL 411
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNT------LLK 347
G KPD V VL C G ++ G E + LS+T L+
Sbjct: 412 LKSG--TKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKH-----RLSHTSDHYTCLVD 464
Query: 348 MYADCGASRDARLVFEQMPSK-TVVSWTSMIRGYVKKGGFN--NEVFRLFRKMNSEGLKP 404
+ A G + V +MP K + W S++ G G + E + K+ E
Sbjct: 465 LLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPEN-PV 523
Query: 405 TAVSISSILPACGR 418
T V++++I A G+
Sbjct: 524 TYVTMANIYAAAGK 537
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 323 bits (827), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 198/607 (32%), Positives = 316/607 (52%), Gaps = 56/607 (9%)
Query: 217 LRQGRDVHLIAVKLGLEG--EVFASNSLLKMYVDCGSMRDARLVFEKMPC--KDVVSWTS 272
LR G+++H + GL+ + SN+L + Y G M A+ +F+++P KD V WT+
Sbjct: 22 LRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTT 81
Query: 273 MIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVR 332
++ + G L +M+LF M + V+ D V V + VC + L ++ HG V+
Sbjct: 82 LLSSFSRYGLLVNSMKLFVEMRRK--RVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVK 139
Query: 333 NGVECDVLLSNTLLKMYADCGASRDARLVFEQ---------------------------- 364
GV V + N L+ MY CG + + +FE+
Sbjct: 140 MGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREV 199
Query: 365 ---MPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSE-GLKPTAVSISSILPACGRIA 420
MP + V+WT M+ GY+ GF EV L +M G V++ S+L AC +
Sbjct: 200 FHEMPERNAVAWTVMVAGYLG-AGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSG 258
Query: 421 SHKHGREIHGYLLRNGVEF-------DINVSNAVIDMYVKSGAIACALNVFGEMNEKDTI 473
+ GR +H Y L+ + D+ V A++DMY K G I ++NVF M +++ +
Sbjct: 259 NLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVV 318
Query: 474 SWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNH 533
+W+ + G ++HG+G++ +D+F Q+ R E DD + A L ACS + + +EG CF+
Sbjct: 319 TWNALFSGLAMHGKGRMVIDMFPQMIR--EVKPDDLTFTAVLSACSHSGIVDEGWRCFHS 376
Query: 534 IR----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYAL 589
+R P + H A V LL R GL +EA + +RE + + VL LL C +HG+ +
Sbjct: 377 LRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEI 436
Query: 590 GKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYRE 649
+++ +L ++ P N E +L+ N + +G+ D+ D +R ++R+RG++ + +
Sbjct: 437 AERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVND 496
Query: 650 KVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWD--FSLHDVD-EERECTQIEHS 706
VH F +GD SHPR KEI L +E +R+ G P S + D EE+E HS
Sbjct: 497 SVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHS 556
Query: 707 ELLALAFGLISSQ-AGPIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGH 765
E LA+ FGL+ ++ + P+ + KN R+CR CH K VSKV REII++D N FH FK G
Sbjct: 557 EKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGS 616
Query: 766 CTCEDFW 772
C+C D+W
Sbjct: 617 CSCSDYW 623
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 186/445 (41%), Gaps = 52/445 (11%)
Query: 119 GKQLHTHAVKLAL--SSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDC--WTFLAK 174
GK+LH L + R++ AL YAS ++ AQ LFD+ D WT L
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLS 84
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
+ G+ ++++LF M + L + H +AVK+G+
Sbjct: 85 SFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLT 144
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFE-------------------------------KMP 263
V N+L+ MY CG + + + +FE +MP
Sbjct: 145 SVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMP 204
Query: 264 CKDVVSWTSMIRGCVQNGELSEAMELFRRMNLE---GLSVKPDLVMVSTVLPVCGMIGSL 320
++ V+WT M+ G + G E +EL M GL + V + ++L C G+L
Sbjct: 205 ERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGL----NFVTLCSMLSACAQSGNL 260
Query: 321 KHGREIHGYLVRN----GVEC---DVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSW 373
GR +H Y ++ G E DV++ L+ MYA CG + VF M + VV+W
Sbjct: 261 VVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTW 320
Query: 374 TSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLL 433
++ G G V +F +M E +KP ++ +++L AC G L
Sbjct: 321 NALFSGLAMHGK-GRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLR 378
Query: 434 RNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMN-EKDTISWSMMIFGCSLHGQGKLGV 492
G+E ++ ++D+ ++G I A + EM + + ++ CS+HG+ ++
Sbjct: 379 FYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAE 438
Query: 493 DLFRQLERNSEAPLDDNIYAAALHA 517
+ R+L + S + I + ++
Sbjct: 439 RIKRELIQMSPGNTEYQILMSNMYV 463
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 322 bits (826), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 209/733 (28%), Positives = 354/733 (48%), Gaps = 28/733 (3%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
Q+FD+ + D WN +I S + A+ +++M+ V + +
Sbjct: 85 QLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGIS 144
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
GK++H +KL S + +LI LY L A+ +F++ W +
Sbjct: 145 SLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMIS 204
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE- 233
Y+ G S+L LF M+ + S + G+++H AV+ +E
Sbjct: 205 GYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIET 264
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
G+V S+L MY G + A +F M +++V+W MI +NG +++A F++M
Sbjct: 265 GDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKM 324
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCG 353
+ E ++PD++ +LP ++ GR IHGY +R G ++L L+ MY +CG
Sbjct: 325 S-EQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMYGECG 379
Query: 354 ASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSIL 413
+ A ++F++M K V+SW S+I YV+ G N LF+++ L P + +I+SIL
Sbjct: 380 QLKSAEVIFDRMAEKNVISWNSIIAAYVQNGK-NYSALELFQELWDSSLVPDSTTIASIL 438
Query: 414 PACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTI 473
PA S GREIH Y++++ + + N+++ MY G + A F + KD +
Sbjct: 439 PAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVV 498
Query: 474 SWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNH 533
SW+ +I ++HG G++ V LF ++ + P + + +A+ L ACS + M +EG F
Sbjct: 499 SWNSIIMAYAVHGFGRISVWLFSEMIASRVNP-NKSTFASLLAACSISGMVDEGWEYFES 557
Query: 534 IR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYA 588
++ P I H + L+ R G F A F+ E + LL R H +
Sbjct: 558 MKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDIT 617
Query: 589 LGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYR 648
+ + EQ+ ++E N YVLLLN +A G+ + V++I+ + +G+ + + +
Sbjct: 618 IAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAK 677
Query: 649 EKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEERECTQIE---- 704
K HVF GD SH +I L + E D +H V R T ++
Sbjct: 678 GKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEE------DIYVHCVSRLRPETLVKSRSN 731
Query: 705 ----HSELLALAFGLISSQAG-PIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFH 759
HS LA FGLIS++ G + + N+R+CR CH+F + S++T REI++ D FH
Sbjct: 732 SPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFH 791
Query: 760 HFKHGHCTCEDFW 772
HF +G C+C ++W
Sbjct: 792 HFSNGRCSCGNYW 804
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/377 (31%), Positives = 192/377 (50%), Gaps = 10/377 (2%)
Query: 154 AQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXM 213
A LFD+ + W + K + G+ A++ + RMV
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 214 MGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSM 273
+ SL +G+ +H + +KLG +V+ NSL+ +Y+ G DA VFE+MP +D+VSW SM
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 274 IRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN 333
I G + G+ ++ LF+ M G KPD + L C + S K G+EIH + VR+
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGF--KPDRFSTMSALGACSHVYSPKMGKEIHCHAVRS 260
Query: 334 GVEC-DVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFR 392
+E DV++ ++L MY+ G A +F M + +V+W MI Y + G + F
Sbjct: 261 RIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRV-TDAFL 319
Query: 393 LFRKMNSE-GLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMY 451
F+KM+ + GL+P ++ ++LPA + GR IHGY +R G + + A+IDMY
Sbjct: 320 CFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMY 375
Query: 452 VKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIY 511
+ G + A +F M EK+ ISW+ +I +G+ ++LF++L +S P D
Sbjct: 376 GECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVP-DSTTI 434
Query: 512 AAALHACSTARMFEEGR 528
A+ L A + + EGR
Sbjct: 435 ASILPAYAESLSLSEGR 451
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 144/263 (54%), Gaps = 9/263 (3%)
Query: 243 LKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKP 302
L+ + D M DA +F++M D W MI+G G EA++ + RM G VK
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAG--VKA 128
Query: 303 DLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVF 362
D V+ I SL+ G++IH +++ G DV + N+L+ +Y G + DA VF
Sbjct: 129 DTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVF 188
Query: 363 EQMPSKTVVSWTSMIRGYVKKG-GFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIAS 421
E+MP + +VSW SMI GY+ G GF++ LF++M G KP S S L AC + S
Sbjct: 189 EEMPERDIVSWNSMISGYLALGDGFSS--LMLFKEMLKCGFKPDRFSTMSALGACSHVYS 246
Query: 422 HKHGREIHGYLLRNGVEF-DINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIF 480
K G+EIH + +R+ +E D+ V +++DMY K G ++ A +F M +++ ++W++MI
Sbjct: 247 PKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMI- 305
Query: 481 GCSLHGQGKLGVDLFRQLERNSE 503
GC + + D F ++ SE
Sbjct: 306 GC--YARNGRVTDAFLCFQKMSE 326
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 322 bits (824), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 191/572 (33%), Positives = 316/572 (55%), Gaps = 16/572 (2%)
Query: 214 MGSLRQGRDVHLIAVKLGLE-GEVFASNSLLKMYVDCGS---MRDARLVFEKMPCK-DVV 268
+ S+ + R +H +++ G+ + L+ V S M A VF K+ +V
Sbjct: 27 VSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVF 86
Query: 269 SWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHG 328
W ++IRG + G A L+R M + GL V+PD ++ + ++ G IH
Sbjct: 87 IWNTLIRGYAEIGNSISAFSLYREMRVSGL-VEPDTHTYPFLIKAVTTMADVRLGETIHS 145
Query: 329 YLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNN 388
++R+G + + N+LL +YA+CG A VF++MP K +V+W S+I G+ + G
Sbjct: 146 VVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK-PE 204
Query: 389 EVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVI 448
E L+ +MNS+G+KP +I S+L AC +I + G+ +H Y+++ G+ +++ SN ++
Sbjct: 205 EALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLL 264
Query: 449 DMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDD 508
D+Y + G + A +F EM +K+++SW+ +I G +++G GK ++LF+ +E ++E L
Sbjct: 265 DLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME-STEGLLPC 323
Query: 509 NI-YAAALHACSTARMFEEGRVCFNHIR-----GPMIAHCAQKVSLLARCGLFDEAMVFI 562
I + L+ACS M +EG F +R P I H V LLAR G +A +I
Sbjct: 324 EITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYI 383
Query: 563 REQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLD 622
+ ++ + + R LL C +HG+ L + Q+ +LEP ++ +YVLL N +A + +
Sbjct: 384 KSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWS 443
Query: 623 MVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEG 682
V KIR+ + G+K + +VH F GD SHP+ I + L+ +R+EG
Sbjct: 444 DVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEG 503
Query: 683 VEPKWDFSLHDV-DEERECTQIEHSELLALAFGLISS-QAGPIRLEKNSRVCRGCHDFAK 740
P+ DV +EE+E + HSE +A+AF LIS+ + PI + KN RVC CH K
Sbjct: 504 YVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIK 563
Query: 741 FVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
VSKV REI+++D + FHHFK+G C+C+D+W
Sbjct: 564 LVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 148/332 (44%), Gaps = 13/332 (3%)
Query: 54 HQVFDK-SPEWDTLAWNTLIHTHLSNNHFPLAISTFTQM-LRHAVXXXXXXXXXXXXASR 111
H+VF K + WNTLI + + A S + +M + V A
Sbjct: 73 HKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVT 132
Query: 112 LAADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTF 171
AD LG+ +H+ ++ S + +L+HLYA+ D+A A +FDK W
Sbjct: 133 TMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNS 192
Query: 172 LAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLG 231
+ + G P AL L+ M +G+L G+ VH+ +K+G
Sbjct: 193 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 252
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFR 291
L + +SN LL +Y CG + +A+ +F++M K+ VSWTS+I G NG EA+ELF+
Sbjct: 253 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 312
Query: 292 RM-NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVR----NGVECDVLLSNTLL 346
M + EGL P + +L C G +K G E Y R +E + ++
Sbjct: 313 YMESTEGL--LPCEITFVGILYACSHCGMVKEGFE---YFRRMREEYKIEPRIEHFGCMV 367
Query: 347 KMYADCGASRDARLVFEQMPSK-TVVSWTSMI 377
+ A G + A + MP + VV W +++
Sbjct: 368 DLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 399
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 188/562 (33%), Positives = 303/562 (53%), Gaps = 17/562 (3%)
Query: 219 QGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVS--WTSMIRG 276
G+ +H K G E E F +L+ MY CG + DAR VFE+ P +S + ++I G
Sbjct: 71 SGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISG 130
Query: 277 CVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVE 336
N ++++A +FRRM G+SV D V + ++P+C + L GR +HG V+ G++
Sbjct: 131 YTANSKVTDAAYMFRRMKETGVSV--DSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLD 188
Query: 337 CDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRK 396
+V + N+ + MY CG+ R +F++MP K +++W ++I GY + G +V L+ +
Sbjct: 189 SEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGY-SQNGLAYDVLELYEQ 247
Query: 397 MNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGA 456
M S G+ P ++ S+L +C + + K G E+ + NG ++ VSNA I MY + G
Sbjct: 248 MKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGN 307
Query: 457 IACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALH 516
+A A VF M K +SW+ MI +HG G++G+ LF + + P D ++ L
Sbjct: 308 LAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRP-DGAVFVMVLS 366
Query: 517 ACSTARMFEEGRVCFNHIR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHP 571
ACS + + ++G F ++ P H + V LL R G DEAM FI +E
Sbjct: 367 ACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDG 426
Query: 572 EVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETI 631
V LL C+IH + + ++ E EP N YVL+ N ++ + + +IR +
Sbjct: 427 AVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMM 486
Query: 632 RERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSL 691
RER + K ++ ++ +VH+F GD SH + +E+ ++E+ T +E +
Sbjct: 487 RERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEV----HRMLDELETSVMELAGNMDC 542
Query: 692 HDVDEERECTQIEHSELLALAFGLISSQAGP-IRLEKNSRVCRGCHDFAKFVSKVTGREI 750
D EE T EHSE LA+AFG+++S G I + KN RVC CH F K VSK+ R+
Sbjct: 543 -DRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQF 601
Query: 751 ILKDPNFFHHFKHGHCTCEDFW 772
+++D + FH+FK G C+C+D+W
Sbjct: 602 VVRDASRFHYFKDGVCSCKDYW 623
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 185/428 (43%), Gaps = 13/428 (3%)
Query: 65 TLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAADFSL---GKQ 121
+ WN + + F +IS + MLR + A SL G+Q
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKS---CASLSLPVSGQQ 74
Query: 122 LHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFG--SDCWTFLAKLYVLE 179
LH H K + L ALI +Y +A A+ +F++ S C+ L Y
Sbjct: 75 LHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTAN 134
Query: 180 GMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFAS 239
A +F RM + L GR +H VK GL+ EV
Sbjct: 135 SKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVL 194
Query: 240 NSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLS 299
NS + MY+ CGS+ R +F++MP K +++W ++I G QNG + +EL+ +M G
Sbjct: 195 NSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSG-- 252
Query: 300 VKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDAR 359
V PD + +VL C +G+ K G E+ + NG +V +SN + MYA CG AR
Sbjct: 253 VCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKAR 312
Query: 360 LVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRI 419
VF+ MP K++VSWT+MI Y G LF M G++P +L AC
Sbjct: 313 AVFDIMPVKSLVSWTAMIGCY-GMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHS 371
Query: 420 ASHKHGREIHGYLLRN-GVEFDINVSNAVIDMYVKSGAIACALNVFGEMN-EKDTISWSM 477
G E+ + R +E + ++D+ ++G + A+ M E D W
Sbjct: 372 GLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGA 431
Query: 478 MIFGCSLH 485
++ C +H
Sbjct: 432 LLGACKIH 439
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 178/379 (46%), Gaps = 17/379 (4%)
Query: 270 WTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGY 329
W +R SE++ L+R M G S PD +L C + G+++H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSS--PDAFSFPFILKSCASLSLPVSGQQLHCH 78
Query: 330 LVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMP--SKTVVSWTSMIRGYVKKGGFN 387
+ + G E + + L+ MY CG DAR VFE+ P S+ V + ++I GY
Sbjct: 79 VTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVT 138
Query: 388 NEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAV 447
+ + +FR+M G+ +V++ ++P C GR +HG ++ G++ ++ V N+
Sbjct: 139 DAAY-MFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSF 197
Query: 448 IDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLD 507
I MY+K G++ +F EM K I+W+ +I G S +G ++L+ Q++ + P D
Sbjct: 198 ITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCP-D 256
Query: 508 DNIYAAALHACS--TARMF--EEGRVCFNHIRGPMIAHCAQKVSLLARCGLFDEAMVFIR 563
+ L +C+ A+ E G++ ++ P + +S+ ARCG +A
Sbjct: 257 PFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFD 316
Query: 564 EQKIEQHPEVLRKLLEGCR-IHGEYALGKQVIEQLCE--LEPLNAENYVLLLNWHAGKGK 620
++ V + GC +HG +G + + + + + P + +V++L+ + G
Sbjct: 317 IMPVKSL--VSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRP-DGAVFVMVLSACSHSGL 373
Query: 621 LDM-VDKIRETIRERGLKP 638
D ++ R RE L+P
Sbjct: 374 TDKGLELFRAMKREYKLEP 392
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 114/275 (41%), Gaps = 6/275 (2%)
Query: 55 QVFDKSPEWDTLA--WNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRL 112
+VF+++P+ L+ +N LI + +N+ A F +M V +
Sbjct: 109 KVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTV 168
Query: 113 AADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFL 172
LG+ LH VK L S L + I +Y + + LFD+ G W +
Sbjct: 169 PEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAV 228
Query: 173 AKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL 232
Y G+ LEL+ +M +G+ + G +V + G
Sbjct: 229 ISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGF 288
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSE-AMELFR 291
VF SN+ + MY CG++ AR VF+ MP K +VSWT+MI GC + E + LF
Sbjct: 289 VPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMI-GCYGMHGMGEIGLMLFD 347
Query: 292 RMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREI 326
M G ++PD + VL C G G E+
Sbjct: 348 DMIKRG--IRPDGAVFVMVLSACSHSGLTDKGLEL 380
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 321 bits (822), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 201/698 (28%), Positives = 344/698 (49%), Gaps = 49/698 (7%)
Query: 120 KQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKT-APFGSDCWTFLAKLYVL 178
KQLH H ++ ++ + ++ + + + +S +++ A +F +P S + +
Sbjct: 29 KQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNPFLRDLSR 88
Query: 179 EGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFA 238
PR+ + + R+ + +L +G ++H +A K+ + F
Sbjct: 89 SSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFV 148
Query: 239 SNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGL 298
+ MY CG + AR VF++M +DVV+W +MI + G + EA +LF M +
Sbjct: 149 ETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEM--KDS 206
Query: 299 SVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYA-------- 350
+V PD +++ ++ CG G++++ R I+ +L+ N V D L L+ MYA
Sbjct: 207 NVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMA 266
Query: 351 -----------------------DCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFN 387
CG DA+++F+Q K +V WT+MI YV+ +
Sbjct: 267 REFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVE-SDYP 325
Query: 388 NEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAV 447
E R+F +M G+KP VS+ S++ AC + + +H + NG+E +++++NA+
Sbjct: 326 QEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNAL 385
Query: 448 IDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLD 507
I+MY K G + +VF +M ++ +SWS MI S+HG+ + LF ++++ + P +
Sbjct: 386 INMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEP-N 444
Query: 508 DNIYAAALHACSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFI 562
+ + L+ CS + + EEG+ F + P + H V L R L EA+ I
Sbjct: 445 EVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVI 504
Query: 563 REQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLD 622
+ + + L+ CRIHGE LGK +++ ELEP + VL+ N +A + + +
Sbjct: 505 ESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWE 564
Query: 623 MVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEG 682
V IR + E+ + +K + K H F GD H + EI + L + +++ G
Sbjct: 565 DVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAG 624
Query: 683 VEPKWDFSLHDV-DEERECTQIEHSELLALAFGLISSQ-------AGPIRLEKNSRVCRG 734
P L DV +EE++ + HSE LAL FGL++ + G IR+ KN RVC
Sbjct: 625 YVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCED 684
Query: 735 CHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
CH F K VSKV REII++D FH +K+G C+C D+W
Sbjct: 685 CHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/502 (24%), Positives = 214/502 (42%), Gaps = 52/502 (10%)
Query: 55 QVFDKSPEW-DTLAWNTLIHTHLSNNHFPLAISTFTQMLRH--AVXXXXXXXXXXXXASR 111
VF P +++ +N + LS + P A F Q +RH S+
Sbjct: 65 NVFSSIPSPPESIVFNPFLRD-LSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSK 123
Query: 112 LAADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTF 171
++A F G +LH A K+A + +YAS I A+ +FD+ + W
Sbjct: 124 VSALFE-GMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 172 LAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLG 231
+ + Y G+ A +LF M G++R R ++ ++
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 232 LEGEVFASNSLLKMYV-------------------------------DCGSMRDARLVFE 260
+ + +L+ MY CG + DA+++F+
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302
Query: 261 KMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSL 320
+ KD+V WT+MI V++ EA+ +F M G +KPD+V + +V+ C +G L
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSG--IKPDVVSMFSVISACANLGIL 360
Query: 321 KHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGY 380
+ +H + NG+E ++ ++N L+ MYA CG R VFE+MP + VVSW+SMI
Sbjct: 361 DKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINA- 419
Query: 381 VKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFD 440
+ G ++ LF +M E ++P V+ +L C + G++I + E++
Sbjct: 420 LSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTD---EYN 476
Query: 441 INVS----NAVIDMYVKSGAIACALNVFGEMN-EKDTISWSMMIFGCSLHGQ---GKLGV 492
I ++D++ ++ + AL V M + + W ++ C +HG+ GK
Sbjct: 477 ITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAA 536
Query: 493 DLFRQLERNSEAPLD--DNIYA 512
+LE + + L NIYA
Sbjct: 537 KRILELEPDHDGALVLMSNIYA 558
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 110/270 (40%), Gaps = 17/270 (6%)
Query: 308 STVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLL---KMYADCGASRDARLVFEQ 364
+T+L SL H +++H +++R + + N+ L + + A VF
Sbjct: 13 NTILEKLSFCKSLNHIKQLHAHILRTVINHKL---NSFLFNLSVSSSSINLSYALNVFSS 69
Query: 365 MPSKT-VVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHK 423
+PS + + +R + + ++++ G + S IL A ++++
Sbjct: 70 IPSPPESIVFNPFLRDLSRSSEPRATIL-FYQRIRHVGGRLDQFSFLPILKAVSKVSALF 128
Query: 424 HGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCS 483
G E+HG + D V +DMY G I A NVF EM+ +D ++W+ MI
Sbjct: 129 EGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYC 188
Query: 484 LHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCF-----NHIRGPM 538
G LF +++ ++ P D+ I + AC R + N +R M
Sbjct: 189 RFGLVDEAFKLFEEMKDSNVMP-DEMILCNIVSACGRTGNMRYNRAIYEFLIENDVR--M 245
Query: 539 IAHCAQK-VSLLARCGLFDEAMVFIREQKI 567
H V++ A G D A F R+ +
Sbjct: 246 DTHLLTALVTMYAGAGCMDMAREFFRKMSV 275
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 318 bits (816), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 199/630 (31%), Positives = 327/630 (51%), Gaps = 12/630 (1%)
Query: 150 DIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXX 209
DI A+ +FD + W L + + A+E++ M+
Sbjct: 114 DIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFK 173
Query: 210 XXXMMGSLRQGRDVHLIAVKLGLE-GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVV 268
+ ++ + H +AV LGLE VF ++L+ MYV G R+A+LV +++ KDVV
Sbjct: 174 AFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVV 233
Query: 269 SWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHG 328
T++I G Q GE +EA++ F+ M +E V+P+ ++VL CG + + +G+ IHG
Sbjct: 234 LITALIVGYSQKGEDTEAVKAFQSMLVE--KVQPNEYTYASVLISCGNLKDIGNGKLIHG 291
Query: 329 YLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNN 388
+V++G E + +LL MY C D+ VF+ + VSWTS+I G V+ G
Sbjct: 292 LMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEM 351
Query: 389 EVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVI 448
+ FRKM + +KP + ++SS L C +A + GR+IHG + + G + D + +I
Sbjct: 352 ALIE-FRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLI 410
Query: 449 DMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDD 508
D+Y K G A VF ++E D IS + MI+ + +G G+ +DLF ++ P D
Sbjct: 411 DLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDV 470
Query: 509 NIYAAALHACSTARMFEEGRVCFNHIRGPMIA----HCAQKVSLLARCGLFDEAMVFIRE 564
+ + L AC+ +R+ EEG F+ R I H A V LL R G +EA + E
Sbjct: 471 TVLSVLL-ACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTE 529
Query: 565 QKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMV 624
I + R LL C++H + + +++ ++ E+EP + +L+ N +A GK + V
Sbjct: 530 V-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRV 588
Query: 625 DKIRETIRERGLKPKKACTWTLYREKVHVFGTGDV-SHPRKKEICSALQGFMEEMRTEGV 683
+++ +++ LK A +W ++ H F GD+ SHP ++I L+ +++ + G
Sbjct: 589 IEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGY 648
Query: 684 EPKWDFSLHDVDEE-RECTQIEHSELLALAFGLISSQAGPIRLEKNSRVCRGCHDFAKFV 742
D++E +E + +HSE LA+AF + + G IR+ KN RVC CH + K V
Sbjct: 649 VEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVGGSIRILKNLRVCVDCHSWIKIV 708
Query: 743 SKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
S+V REII +D FHHF+ G C+C D+W
Sbjct: 709 SRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 210/469 (44%), Gaps = 15/469 (3%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
QVFD E + WN+LI + + A+ + M+ + V A +
Sbjct: 120 QVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKA---FS 176
Query: 115 DFSLGKQL---HTHAVKLALS-SRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWT 170
D SL K+ H AV L L S AL+ +Y A+ + D+ T
Sbjct: 177 DLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLIT 236
Query: 171 FLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKL 230
L Y +G A++ F M+ + + G+ +H + VK
Sbjct: 237 ALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKS 296
Query: 231 GLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELF 290
G E + + SLL MY+ C + D+ VF+ + + VSWTS+I G VQNG A+ F
Sbjct: 297 GFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEF 356
Query: 291 RRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYA 350
R+M + S+KP+ +S+ L C + + GR+IHG + + G + D + L+ +Y
Sbjct: 357 RKMMRD--SIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYG 414
Query: 351 DCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSIS 410
CG S ARLVF+ + V+S +MI Y + GF E LF +M + GL+P V++
Sbjct: 415 KCGCSDMARLVFDTLSEVDVISLNTMIYSYA-QNGFGREALDLFERMINLGLQPNDVTVL 473
Query: 411 SILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK 470
S+L AC + G E+ ++ + + ++D+ ++G + A + E+
Sbjct: 474 SVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINP 533
Query: 471 DTISWSMMIFGCSLHGQGKLGVDLFR---QLERNSEAPLD--DNIYAAA 514
D + W ++ C +H + ++ + R ++E E L N+YA+
Sbjct: 534 DLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYAST 582
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 180/344 (52%), Gaps = 19/344 (5%)
Query: 228 VKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAM 287
+K G E+ S L+ + CG + AR VF+ M + +V+W S+I +++ EA+
Sbjct: 92 LKSGFPAEISGSK-LVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAV 150
Query: 288 ELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVEC-DVLLSNTLL 346
E++R M +V PD +S+V + K + HG V G+E +V + + L+
Sbjct: 151 EMYRLMITN--NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALV 208
Query: 347 KMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTA 406
MY G +R+A+LV +++ K VV T++I GY +KG + E + F+ M E ++P
Sbjct: 209 DMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGE-DTEAVKAFQSMLVEKVQPNE 267
Query: 407 VSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGE 466
+ +S+L +CG + +G+ IHG ++++G E + +++ MY++ + +L VF
Sbjct: 268 YTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKC 327
Query: 467 MNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEE 526
+ + +SW+ +I G +G+ ++ + FR++ R+S P + ++AL CS MFEE
Sbjct: 328 IEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKP-NSFTLSSALRGCSNLAMFEE 386
Query: 527 GRVCFNHIRGPMIAHCAQK--------VSLLARCGLFDEA-MVF 561
GR I G + + + + L +CG D A +VF
Sbjct: 387 GR----QIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVF 426
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 318 bits (815), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 189/565 (33%), Positives = 302/565 (53%), Gaps = 15/565 (2%)
Query: 218 RQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGC 277
+Q + +H I ++ G + LL+ V G M AR VF++M + W ++ +G
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGY 84
Query: 278 VQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVEC 337
V+N E++ L+++M L V+PD V+ +G G +H ++V+ G C
Sbjct: 85 VRNQLPFESLLLYKKM--RDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGC 142
Query: 338 DVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEV-FRLFRK 396
+++ L+ MY G A +FE M K +V+W + + V+ G N+ + F K
Sbjct: 143 LGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTG--NSAIALEYFNK 200
Query: 397 MNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGA 456
M ++ ++ + ++ S+L ACG++ S + G EI+ + ++ +I V NA +DM++K G
Sbjct: 201 MCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGN 260
Query: 457 IACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALH 516
A +F EM +++ +SWS MI G +++G + + LF ++ P + + L
Sbjct: 261 TEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRP-NYVTFLGVLS 319
Query: 517 ACSTARMFEEGRVCFNHIRG-------PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQ 569
ACS A + EG+ F+ + P H A V LL R GL +EA FI++ +E
Sbjct: 320 ACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEP 379
Query: 570 HPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRE 629
+ LL C +H + LG++V + L E P +VLL N +A GK D VDK+R
Sbjct: 380 DTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRS 439
Query: 630 TIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDF 689
+R+ G K A + + K+H F GD SHP+ K I L ++++R G P
Sbjct: 440 KMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCS 499
Query: 690 SLHDVD-EERECTQIEHSELLALAFGLISSQAG-PIRLEKNSRVCRGCHDFAKFVSKVTG 747
HDV+ EE+EC+ HSE LA+AFGLI + G PIR+ KN R C CH F+KFVS +T
Sbjct: 500 VFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTS 559
Query: 748 REIILKDPNFFHHFKHGHCTCEDFW 772
EII++D N FHHF++G C+C++FW
Sbjct: 560 TEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 188/407 (46%), Gaps = 18/407 (4%)
Query: 120 KQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLE 179
K++H ++ S + L L+ + D+ A+ +FD+ W L K YV
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 180 GMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFAS 239
+P +L L+ +M +G G +H VK G +
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 240 NSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLS 299
L+ MY+ G + A +FE M KD+V+W + + CVQ G + A+E F +M + +
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCAD--A 205
Query: 300 VKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDAR 359
V+ D V ++L CG +GSL+ G EI+ + ++C++++ N L M+ CG + AR
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAAR 265
Query: 360 LVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRI 419
++FE+M + VVSW++MI GY G + E LF M +EGL+P V+ +L AC
Sbjct: 266 VLFEEMKQRNVVSWSTMIVGYAMNGD-SREALTLFTTMQNEGLRPNYVTFLGVLSACSHA 324
Query: 420 ASHKHGREIHGYLLRNGVEFDINVS------NAVIDMYVKSGAIACALNVFGEMN-EKDT 472
G+ ++++ D N+ ++D+ +SG + A +M E DT
Sbjct: 325 GLVNEGKRYFSLMVQSN---DKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDT 381
Query: 473 ISWSMMIFGCSLH-----GQGKLGVDLFRQLERNSEAPLDDNIYAAA 514
W ++ C++H GQ V + + S L NIYAAA
Sbjct: 382 GIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAA 428
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 2/279 (0%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
QVFD+ + WNTL ++ N ++ + +M V A
Sbjct: 64 QVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLG 123
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
DFS G LH H VK L+ +Y +++ A+ LF+ W
Sbjct: 124 DFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLA 183
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
+ V G ALE F++M +GSL G +++ A K ++
Sbjct: 184 VCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDC 243
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
+ N+ L M++ CG+ AR++FE+M ++VVSW++MI G NG+ EA+ LF M
Sbjct: 244 NIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQ 303
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN 333
EGL +P+ V VL C G + G+ +V++
Sbjct: 304 NEGL--RPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQS 340
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 215/759 (28%), Positives = 348/759 (45%), Gaps = 45/759 (5%)
Query: 55 QVFDKSPEWDT-LAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
+VF+ S + T +N+LI + S+ AI F +M+ + A +
Sbjct: 88 EVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKS 147
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
G Q+H VK+ + +L+H YA ++ A+ +FD+ + WT +
Sbjct: 148 RAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI 207
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXX-XMMGSLRQGRDVHLIAVKLGL 232
Y + A++LF RMV + L G V+ G+
Sbjct: 208 CGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
E ++L+ MY+ C ++ A+ +F++ ++ +M V+ G EA+ +F
Sbjct: 268 EVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNL 327
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADC 352
M G V+PD + + + + C + ++ G+ HGY++RNG E + N L+ MY C
Sbjct: 328 MMDSG--VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 353 -------------------------------GASRDARLVFEQMPSKTVVSWTSMIRGYV 381
G A FE MP K +VSW ++I G V
Sbjct: 386 HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 445
Query: 382 KKGGFNNEVFRLFRKMNS-EGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFD 440
+G E +F M S EG+ V++ SI ACG + + + I+ Y+ +NG++ D
Sbjct: 446 -QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLD 504
Query: 441 INVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLER 500
+ + ++DM+ + G A+++F + +D +W+ I ++ G + ++LF +
Sbjct: 505 VRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIE 564
Query: 501 NSEAPLDDNIYAAALHACSTARMFEEGRVCFN-----HIRGPMIAHCAQKVSLLARCGLF 555
P D + AL ACS + ++G+ F H P H V LL R GL
Sbjct: 565 QGLKP-DGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLL 623
Query: 556 DEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWH 615
+EA+ I + +E + + LL CR+ G + E++ L P +YVLL N +
Sbjct: 624 EEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVY 683
Query: 616 AGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFM 675
A G+ + + K+R +++E+GL+ + R K H F +GD SHP I + L
Sbjct: 684 ASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVS 743
Query: 676 EEMRTEGVEPKWDFSLHDVDEERECTQIE-HSELLALAFGLISSQAG-PIRLEKNSRVCR 733
+ G P L DVDE+ + + HSE LA+A+GLISS G IR+ KN RVC
Sbjct: 744 QRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCS 803
Query: 734 GCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
CH FAKF SKV REIIL+D N FH+ + G C+C DFW
Sbjct: 804 DCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 154/315 (48%), Gaps = 7/315 (2%)
Query: 224 HLIAVKLGLEGEVFASNSLLKMYVDCG---SMRDARLVFEKMPCKDV-VSWTSMIRGCVQ 279
H K GL+ +V L+ + G S+ A+ VFE + S+IRG
Sbjct: 52 HRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYAS 111
Query: 280 NGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDV 339
+G +EA+ LF RM G+S PD L C + +G +IHG +V+ G D+
Sbjct: 112 SGLCNEAILLFLRMMNSGIS--PDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDL 169
Query: 340 LLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNS 399
+ N+L+ YA+CG AR VF++M + VVSWTSMI GY ++ + V FR +
Sbjct: 170 FVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRD 229
Query: 400 EGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIAC 459
E + P +V++ ++ AC ++ + G +++ ++ +G+E + + +A++DMY+K AI
Sbjct: 230 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 289
Query: 460 ALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACS 519
A +F E + + M G + + +F + + P D +A+ +CS
Sbjct: 290 AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP-DRISMLSAISSCS 348
Query: 520 TARMFEEGRVCFNHI 534
R G+ C ++
Sbjct: 349 QLRNILWGKSCHGYV 363
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 317 bits (811), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 200/645 (31%), Positives = 326/645 (50%), Gaps = 35/645 (5%)
Query: 140 ALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXX 199
L+ Y +I A+ +FD WT L K YV G A LF +M
Sbjct: 84 GLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM------- 136
Query: 200 XXXXXXXXXXXXXMMGSLRQGR-DVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLV 258
++G L+ GR D ++ + + A S++ G + +AR +
Sbjct: 137 --PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREI 194
Query: 259 FEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMI- 317
F++M + V++WT+M+ G QN + +A ++F V P+ VS + G +
Sbjct: 195 FDEMSERSVITWTTMVTGYGQNNRVDDARKIF--------DVMPEKTEVSWTSMLMGYVQ 246
Query: 318 -GSLKHGREIHGYL-VRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTS 375
G ++ E+ + V+ + C+ ++S K G AR VF+ M + SW +
Sbjct: 247 NGRIEDAEELFEVMPVKPVIACNAMISGLGQK-----GEIAKARRVFDSMKERNDASWQT 301
Query: 376 MIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRN 435
+I+ + ++ GF E LF M +G++PT ++ SIL C +AS HG+++H L+R
Sbjct: 302 VIKIH-ERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRC 360
Query: 436 GVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLF 495
+ D+ V++ ++ MY+K G + + +F KD I W+ +I G + HG G+ + +F
Sbjct: 361 QFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVF 420
Query: 496 RQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLA 550
++ + ++ + A L ACS A M EEG + + P+ AH A V +L
Sbjct: 421 CEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLG 480
Query: 551 RCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVL 610
R G F+EAM I +E V LL CR H + + + ++L E+EP N+ Y+L
Sbjct: 481 RAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYIL 540
Query: 611 LLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDV-SHPRKKEICS 669
L N +A +G+ V ++R+ ++ R ++ C+WT KVH F G + SHP ++ I
Sbjct: 541 LSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILK 600
Query: 670 ALQGFMEEMRTEGVEPKWDFSLHDVDEERECTQIE-HSELLALAFGLIS-SQAGPIRLEK 727
L +R G P ++LHDVDEE + ++ HSE LA+A+ L+ S+ PIR+ K
Sbjct: 601 ILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMK 660
Query: 728 NSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
N RVC CH K +SKV REIIL+D N FHHF++G C+C+D+W
Sbjct: 661 NLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 125/519 (24%), Positives = 216/519 (41%), Gaps = 86/519 (16%)
Query: 139 IALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXX 198
+ + HL + + I A+ LFD W + Y MPR A +LF M
Sbjct: 22 VRITHL-SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMP----- 75
Query: 199 XXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLV 258
+ + + N L+ Y+ G + +AR V
Sbjct: 76 ----------------------------------DRNIISWNGLVSGYMKNGEIDEARKV 101
Query: 259 FEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVS-TVLPVCGMI 317
F+ MP ++VVSWT++++G V NG++ A LF +M P+ VS TV+ +I
Sbjct: 102 FDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM--------PEKNKVSWTVM----LI 149
Query: 318 GSLKHGR-EIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSM 376
G L+ GR + L + D + +++ G +AR +F++M ++V++WT+M
Sbjct: 150 GFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTM 209
Query: 377 IRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPAC---GRIASHKHGREIHGYLL 433
+ GY G NN V RK+ + T VS +S+L GRI + E+
Sbjct: 210 VTGY----GQNNRVDDA-RKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVK- 263
Query: 434 RNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVD 493
+ NA+I + G IA A VF M E++ SW +I +G +D
Sbjct: 264 ------PVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALD 317
Query: 494 LFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRGPM---IAHCAQKVSLLA 550
LF +++ P + + S A + +V +R + + +++
Sbjct: 318 LFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYI 377
Query: 551 RCG-LFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPL------ 603
+CG L ++F R + + ++ G HG LG++ ++ CE+ PL
Sbjct: 378 KCGELVKSKLIFDRFPS--KDIIMWNSIISGYASHG---LGEEALKVFCEM-PLSGSTKP 431
Query: 604 NAENYVLLLNWHAGKGKLDMVDKIRETIRER-GLKPKKA 641
N +V L+ + G ++ KI E++ G+KP A
Sbjct: 432 NEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITA 470
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 342 SNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEG 401
+N + + G +AR +F+ SK++ SW SM+ GY F N + R RK+ E
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGY-----FANLMPRDARKLFDEM 74
Query: 402 LKPTAVSISSILPACGRIASHKHGREIHGYLL-RNGVEFDINVSNAVIDMYVKSGAIACA 460
+S + ++ + R++ + RN V + A++ YV +G + A
Sbjct: 75 PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSW-----TALVKGYVHNGKVDVA 129
Query: 461 LNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIY-AAALHACS 519
++F +M EK+ +SW++M+ G G+ L+ + P DNI + +H
Sbjct: 130 ESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMI------PDKDNIARTSMIHGLC 183
Query: 520 TARMFEEGRVCFNHI 534
+E R F+ +
Sbjct: 184 KEGRVDEAREIFDEM 198
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 316 bits (809), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 202/666 (30%), Positives = 323/666 (48%), Gaps = 15/666 (2%)
Query: 118 LGKQLHTHAVKLALSSRA---HTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
+G+ +H H + SSRA + + +LI+LY + A+ LFD W + K
Sbjct: 49 IGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMK 108
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXX-XMMGSLRQGRDVHLIAVKLGLE 233
Y G L+LF M G + +G+ H +K GL
Sbjct: 109 GYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLI 168
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
F N+L+ MY C +A V + +P D+ ++S + G ++ G E +++ R+
Sbjct: 169 SHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKT 228
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCG 353
E V +L +S+ L + + L ++H +VR G +V L+ MY CG
Sbjct: 229 ANEDF-VWNNLTYLSS-LRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCG 286
Query: 354 ASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSIL 413
A+ VF+ ++ + T+++ Y + F E LF KM+++ + P + + +L
Sbjct: 287 KVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFE-EALNLFSKMDTKEVPPNEYTFAILL 345
Query: 414 PACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTI 473
+ ++ K G +HG +L++G + V NA+++MY KSG+I A F M +D +
Sbjct: 346 NSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIV 405
Query: 474 SWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNH 533
+W+ MI GCS HG G+ ++ F ++ E P + + L ACS E+G FN
Sbjct: 406 TWNTMISGCSHHGLGREALEAFDRMIFTGEIP-NRITFIGVLQACSHIGFVEQGLHYFNQ 464
Query: 534 IRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYA 588
+ P I H V LL++ G+F +A F+R IE R LL C + Y
Sbjct: 465 LMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYR 524
Query: 589 LGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYR 648
LGK+V E E P ++ YVLL N HA + + V K+R + RG+K + +W R
Sbjct: 525 LGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIR 584
Query: 649 EKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEE-RECTQIEHSE 707
+ HVF D HP I + ++ M +++ G P + HDVDEE RE HSE
Sbjct: 585 NQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSE 644
Query: 708 LLALAFGLISS-QAGPIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHC 766
LA+A+GLI + + P+ + KN R+C CH K +SK++ R I+++D N FHHF G C
Sbjct: 645 KLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQC 704
Query: 767 TCEDFW 772
+C D+W
Sbjct: 705 SCCDYW 710
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 126/286 (44%), Gaps = 11/286 (3%)
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
D +L Q+H+ V+ ++ ALI++Y + AQ +FD T T +
Sbjct: 252 DLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMD 311
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
Y + AL LF +M + L+QG +H + +K G
Sbjct: 312 AYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRN 371
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
V N+L+ MY GS+ DAR F M +D+V+W +MI GC +G EA+E F RM
Sbjct: 372 HVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMI 431
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN-GVECDVLLSNTLLKMYADCG 353
G P+ + VL C IG ++ G L++ V+ D+ ++ + + G
Sbjct: 432 FTG--EIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAG 489
Query: 354 ASRDARLVFEQMPSK-TVVSWTSMIRG-YVKKGGFNNEVFRLFRKM 397
+DA P + VV+W +++ YV++ +RL +K+
Sbjct: 490 MFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRN------YRLGKKV 529
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 114/259 (44%), Gaps = 18/259 (6%)
Query: 307 VSTVLPVCGMIGSLKHGREIHGYLVRNGVEC---DVLLSNTLLKMYADCGASRDARLVFE 363
++ +L VC L+ G IH +L+ D N+L+ +Y C + AR +F+
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 364 QMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEG-LKPTAVSISSILPACGRIASH 422
MP + VVSW +M++GY + GF+ EV +LF+ M G +P + + +C
Sbjct: 94 LMPERNVVSWCAMMKGY-QNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRI 152
Query: 423 KHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGC 482
+ G++ HG L+ G+ V N ++ MY A+ V ++ D +S + G
Sbjct: 153 EEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGY 212
Query: 483 SLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEG--------RVCFNHI 534
G K G+D+ R+ N + ++ Y ++L S R R FN
Sbjct: 213 LECGAFKEGLDVLRKTA-NEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFN-- 269
Query: 535 RGPMIAHCAQKVSLLARCG 553
+ C +++ +CG
Sbjct: 270 --AEVEACGALINMYGKCG 286
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 313 bits (801), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 214/758 (28%), Positives = 347/758 (45%), Gaps = 45/758 (5%)
Query: 55 QVFDKSPEWDT-LAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
+VF+ S + T +N+LI + S+ AI F +M+ + A +
Sbjct: 88 EVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKS 147
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
G Q+H VK+ + +L+H YA ++ A+ +FD+ + WT +
Sbjct: 148 RAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI 207
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXX-XMMGSLRQGRDVHLIAVKLGL 232
Y + A++LF RMV + L G V+ G+
Sbjct: 208 CGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
E ++L+ MY+ C ++ A+ +F++ ++ +M V+ G EA+ +F
Sbjct: 268 EVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNL 327
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADC 352
M G V+PD + + + + C + ++ G+ HGY++RNG E + N L+ MY C
Sbjct: 328 MMDSG--VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 353 -------------------------------GASRDARLVFEQMPSKTVVSWTSMIRGYV 381
G A FE MP K +VSW ++I G V
Sbjct: 386 HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 445
Query: 382 KKGGFNNEVFRLFRKMNS-EGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFD 440
+G E +F M S EG+ V++ SI ACG + + + I+ Y+ +NG++ D
Sbjct: 446 -QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLD 504
Query: 441 INVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLER 500
+ + ++DM+ + G A+++F + +D +W+ I ++ G + ++LF +
Sbjct: 505 VRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIE 564
Query: 501 NSEAPLDDNIYAAALHACSTARMFEEGRVCFN-----HIRGPMIAHCAQKVSLLARCGLF 555
P D + AL ACS + ++G+ F H P H V LL R GL
Sbjct: 565 QGLKP-DGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLL 623
Query: 556 DEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWH 615
+EA+ I + +E + + LL CR+ G + E++ L P +YVLL N +
Sbjct: 624 EEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVY 683
Query: 616 AGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFM 675
A G+ + + K+R +++E+GL+ + R K H F +GD SHP I + L
Sbjct: 684 ASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVS 743
Query: 676 EEMRTEGVEPKWDFSLHDVDEERECTQIE-HSELLALAFGLISSQAG-PIRLEKNSRVCR 733
+ G P L DVDE+ + + HSE LA+A+GLISS G IR+ KN RVC
Sbjct: 744 QRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCS 803
Query: 734 GCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDF 771
CH FAKF SKV REIIL+D N FH+ + G C+C DF
Sbjct: 804 DCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 154/315 (48%), Gaps = 7/315 (2%)
Query: 224 HLIAVKLGLEGEVFASNSLLKMYVDCG---SMRDARLVFEKMPCKDV-VSWTSMIRGCVQ 279
H K GL+ +V L+ + G S+ A+ VFE + S+IRG
Sbjct: 52 HRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYAS 111
Query: 280 NGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDV 339
+G +EA+ LF RM G+S PD L C + +G +IHG +V+ G D+
Sbjct: 112 SGLCNEAILLFLRMMNSGIS--PDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDL 169
Query: 340 LLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNS 399
+ N+L+ YA+CG AR VF++M + VVSWTSMI GY ++ + V FR +
Sbjct: 170 FVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRD 229
Query: 400 EGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIAC 459
E + P +V++ ++ AC ++ + G +++ ++ +G+E + + +A++DMY+K AI
Sbjct: 230 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 289
Query: 460 ALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACS 519
A +F E + + M G + + +F + + P D +A+ +CS
Sbjct: 290 AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP-DRISMLSAISSCS 348
Query: 520 TARMFEEGRVCFNHI 534
R G+ C ++
Sbjct: 349 QLRNILWGKSCHGYV 363
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 311 bits (796), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 207/672 (30%), Positives = 330/672 (49%), Gaps = 26/672 (3%)
Query: 119 GKQLHTHAVKLALSSRAHTL-IALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYV 177
G+++H H + L + L+++YA IA A+ +F S W +
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLD 391
Query: 178 LEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVF 237
G A+E + M + + G+ +H ++KLG++ V
Sbjct: 392 QNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS 451
Query: 238 ASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGE--LSEAMELFRRMNL 295
SN+L+ +Y + G + + R +F MP D VSW S+I G + E L EA+ F
Sbjct: 452 VSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSII-GALARSERSLPEAVVCFLNAQR 510
Query: 296 EGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGAS 355
G + G L G++IHG ++N + + N L+ Y CG
Sbjct: 511 AGQKLNRITFSSVLSAVSSLSFGEL--GKQIHGLALKNNIADEATTENALIACYGKCGEM 568
Query: 356 RDARLVFEQMPSK-TVVSWTSMIRGYVKKGGFNNEVFR----LFRKMNSEGLKPTAVSIS 410
+F +M + V+W SMI GY+ +NE+ L M G + + +
Sbjct: 569 DGCEKIFSRMAERRDNVTWNSMISGYI-----HNELLAKALDLVWFMLQTGQRLDSFMYA 623
Query: 411 SILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK 470
++L A +A+ + G E+H +R +E D+ V +A++DMY K G + AL F M +
Sbjct: 624 TVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR 683
Query: 471 DTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVC 530
++ SW+ MI G + HGQG+ + LF ++ + + P D + L ACS A + EEG
Sbjct: 684 NSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKH 743
Query: 531 FNHIR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEG-CRIH 584
F + P I H + +L R G D+ FI + ++ + + R +L CR +
Sbjct: 744 FESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRAN 803
Query: 585 GEYA-LGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACT 643
G A LGK+ E L +LEP NA NYVLL N +A G+ + + K R+ +++ +K + +
Sbjct: 804 GRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYS 863
Query: 644 WTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEE-RECTQ 702
W ++ VH+F GD SHP I L+ +MR G P+ F+L+D+++E +E
Sbjct: 864 WVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEIL 923
Query: 703 IEHSELLALAFGLISSQAG--PIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHH 760
HSE LA+AF L + ++ PIR+ KN RVC CH K++SK+ GR+IIL+D N FHH
Sbjct: 924 SYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHH 983
Query: 761 FKHGHCTCEDFW 772
F+ G C+C DFW
Sbjct: 984 FQDGACSCSDFW 995
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 180/380 (47%), Gaps = 18/380 (4%)
Query: 217 LRQGRDVHLIAVKLGL-EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIR 275
L++GR+VH + GL + V N L+ MY CGS+ DAR VF M KD VSW SMI
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388
Query: 276 GCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGV 335
G QNG EA+E ++ M + P + + L C + K G++IHG ++ G+
Sbjct: 389 GLDQNGCFIEAVERYKSMRRH--DILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGI 446
Query: 336 ECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFR 395
+ +V +SN L+ +YA+ G + R +F MP VSW S+I + E F
Sbjct: 447 DLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFL 506
Query: 396 KMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSG 455
G K ++ SS+L A ++ + G++IHG L+N + + NA+I Y K G
Sbjct: 507 NAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCG 566
Query: 456 AIACALNVFGEMNE-KDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAA 514
+ +F M E +D ++W+ MI G + +DL + + + LD +YA
Sbjct: 567 EMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQ-RLDSFMYATV 625
Query: 515 LHACSTARMFEEG--------RVCFNHIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQK 566
L A ++ E G R C + ++ A V + ++CG D A+ F
Sbjct: 626 LSAFASVATLERGMEVHACSVRAC---LESDVVVGSAL-VDMYSKCGRLDYALRFFNTMP 681
Query: 567 IEQHPEVLRKLLEGCRIHGE 586
+ ++ ++ G HG+
Sbjct: 682 V-RNSYSWNSMISGYARHGQ 700
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 163/342 (47%), Gaps = 20/342 (5%)
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFR 291
L+ +V+ N+L+ Y++ G AR VF++MP ++ VSW ++ G +NGE EA+ R
Sbjct: 32 LDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLR 91
Query: 292 RMNLEGLSVKPDLVMVSTVLPVCGMIGSLK--HGREIHGYLVRNGVECDVLLSNTLLKMY 349
M EG + + +VL C IGS+ GR+IHG + + D ++SN L+ MY
Sbjct: 92 DMVKEG--IFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMY 149
Query: 350 ADC-GASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVS 408
C G+ A F + K VSW S+I Y + G FR+F M +G +PT +
Sbjct: 150 WKCIGSVGYALCAFGDIEVKNSVSWNSIISVY-SQAGDQRSAFRIFSSMQYDGSRPTEYT 208
Query: 409 ISSIL-PACGRIASH-KHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGE 466
S++ AC + +I + ++G+ D+ V + ++ + KSG+++ A VF +
Sbjct: 209 FGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQ 268
Query: 467 MNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEE 526
M ++ ++ + ++ G G+ LF ++ NS + Y L + + EE
Sbjct: 269 METRNAVTLNGLMVGLVRQKWGEEATKLF--MDMNSMIDVSPESYVILLSSFPEYSLAEE 326
Query: 527 -----GRVCFNHIRGP-----MIAHCAQKVSLLARCGLFDEA 558
GR H+ M+ V++ A+CG +A
Sbjct: 327 VGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADA 368
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 156/372 (41%), Gaps = 20/372 (5%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VF + D+++WN++I N F A+ + M RH + +
Sbjct: 370 RVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLK 429
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
LG+Q+H ++KL + AL+ LYA + + +F W
Sbjct: 430 WAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWN---- 485
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXX--------XXXMMGSLRQGRDVHLI 226
++ + RS L +V G L G+ +H +
Sbjct: 486 -SIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGEL--GKQIHGL 542
Query: 227 AVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMP-CKDVVSWTSMIRGCVQNGELSE 285
A+K + E N+L+ Y CG M +F +M +D V+W SMI G + N L++
Sbjct: 543 ALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAK 602
Query: 286 AMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTL 345
A++L M G + D M +TVL + +L+ G E+H VR +E DV++ + L
Sbjct: 603 ALDLVWFMLQTGQ--RLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSAL 660
Query: 346 LKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEG-LKP 404
+ MY+ CG A F MP + SW SMI GY + G E +LF M +G P
Sbjct: 661 VDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQ-GEEALKLFETMKLDGQTPP 719
Query: 405 TAVSISSILPAC 416
V+ +L AC
Sbjct: 720 DHVTFVGVLSAC 731
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 117/271 (43%), Gaps = 3/271 (1%)
Query: 55 QVFDKSPEWDTLAWNTLIHT-HLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
++F PE D ++WN++I S P A+ F R A
Sbjct: 471 KIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSL 530
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSD-CWTFL 172
+ LGKQ+H A+K ++ A T ALI Y ++ + +F + A + W +
Sbjct: 531 SFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSM 590
Query: 173 AKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL 232
Y+ + AL+L M+ + +L +G +VH +V+ L
Sbjct: 591 ISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACL 650
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
E +V ++L+ MY CG + A F MP ++ SW SMI G ++G+ EA++LF
Sbjct: 651 ESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFET 710
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHG 323
M L+G PD V VL C G L+ G
Sbjct: 711 MKLDG-QTPPDHVTFVGVLSACSHAGLLEEG 740
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 185/568 (32%), Positives = 303/568 (53%), Gaps = 16/568 (2%)
Query: 219 QGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCV 278
G+ H A G + ++F S++L+ MY CG + DAR VF+++P +++VSWTSMIRG
Sbjct: 94 SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 279 QNGELSEAMELFRRM----NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNG 334
NG +A+ LF+ + N + ++ D + + +V+ C + + IH ++++ G
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 335 VECDVLLSNTLLKMYADCGAS--RDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFR 392
+ V + NTLL YA G AR +F+Q+ K VS+ S++ Y + G +NE F
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ-SGMSNEAFE 272
Query: 393 LFRKM-NSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMY 451
+FR++ ++ + A+++S++L A + + G+ IH ++R G+E D+ V ++IDMY
Sbjct: 273 VFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMY 332
Query: 452 VKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIY 511
K G + A F M K+ SW+ MI G +HG ++LF + + P + +
Sbjct: 333 CKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP-NYITF 391
Query: 512 AAALHACSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQK 566
+ L ACS A + EG FN ++G P + H V LL R G +A I+ K
Sbjct: 392 VSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMK 451
Query: 567 IEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDK 626
++ + LL CRIH L + + +L EL+ N Y+LL + +A G+ V++
Sbjct: 452 MKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVER 511
Query: 627 IRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPK 686
+R ++ RGL + +VHVF GD HP++++I L ++ G
Sbjct: 512 VRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSN 571
Query: 687 WDFSLHDVD-EERECTQIEHSELLALAFGLISSQAGP-IRLEKNSRVCRGCHDFAKFVSK 744
HDVD EE+E T HSE LA+AFG++++ G + + KN RVC CH+ K +SK
Sbjct: 572 TSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISK 631
Query: 745 VTGREIILKDPNFFHHFKHGHCTCEDFW 772
+ RE +++D FHHFK G C+C D+W
Sbjct: 632 IVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 204/450 (45%), Gaps = 13/450 (2%)
Query: 64 DTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAADFSLGKQLH 123
D +WN++I + A+ F+ M + ++ A D GKQ H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 124 THAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPR 183
A S ALI +Y++ + A+ +FD+ WT + + Y L G
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 184 SALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQ------GRDVHLIAVKLGLEGEVF 237
A+ LF ++ ++ + + +H +K G + V
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 238 ASNSLLKMYVDC--GSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNL 295
N+LL Y G + AR +F+++ KD VS+ S++ Q+G +EA E+FRR+ +
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL-V 278
Query: 296 EGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGAS 355
+ V + + +STVL G+L+ G+ IH ++R G+E DV++ +++ MY CG
Sbjct: 279 KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRV 338
Query: 356 RDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPA 415
AR F++M +K V SWT+MI GY G + LF M G++P ++ S+L A
Sbjct: 339 ETARKAFDRMKNKNVRSWTAMIAGY-GMHGHAAKALELFPAMIDSGVRPNYITFVSVLAA 397
Query: 416 CGRIASHKHG-REIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK-DTI 473
C H G R + R GVE + ++D+ ++G + A ++ M K D+I
Sbjct: 398 CSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSI 457
Query: 474 SWSMMIFGCSLHGQGKLG-VDLFRQLERNS 502
WS ++ C +H +L + + R E +S
Sbjct: 458 IWSSLLAACRIHKNVELAEISVARLFELDS 487
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 139/277 (50%), Gaps = 11/277 (3%)
Query: 266 DVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGRE 325
DV SW S+I ++G+ +EA+ F M LS+ P + C + + G++
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSM--RKLSLYPTRSSFPCAIKACSSLFDIFSGKQ 97
Query: 326 IHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGG 385
H G + D+ +S+ L+ MY+ CG DAR VF+++P + +VSWTSMIRGY G
Sbjct: 98 THQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGN 157
Query: 386 FNNEVFRLFRKM------NSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEF 439
+ V LF+ + + + + ++ + S++ AC R+ + IH ++++ G +
Sbjct: 158 ALDAV-SLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDR 216
Query: 440 DINVSNAVIDMYVKS--GAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQ 497
++V N ++D Y K G +A A +F ++ +KD +S++ ++ + G ++FR+
Sbjct: 217 GVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRR 276
Query: 498 LERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHI 534
L +N + + L A S + G+ + +
Sbjct: 277 LVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQV 313
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 146/334 (43%), Gaps = 13/334 (3%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQML------RHAVXXXXXXXXXXXX 108
+VFD+ P+ + ++W ++I + N + A+S F +L A+
Sbjct: 132 KVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVIS 191
Query: 109 ASRLAADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDD--IAVAQTLFDKTAPFGS 166
A L + +H+ +K L+ YA + +AVA+ +FD+
Sbjct: 192 ACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDR 251
Query: 167 DCWTFLAKLYVLEGMPRSALELFHRMVXXXXXX-XXXXXXXXXXXXXMMGSLRQGRDVHL 225
+ + +Y GM A E+F R+V G+LR G+ +H
Sbjct: 252 VSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHD 311
Query: 226 IAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSE 285
+++GLE +V S++ MY CG + AR F++M K+V SWT+MI G +G ++
Sbjct: 312 QVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAK 371
Query: 286 AMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHG-REIHGYLVRNGVECDVLLSNT 344
A+ELF M G V+P+ + +VL C G G R + R GVE +
Sbjct: 372 ALELFPAMIDSG--VRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGC 429
Query: 345 LLKMYADCGASRDARLVFEQMPSK-TVVSWTSMI 377
++ + G + A + ++M K + W+S++
Sbjct: 430 MVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLL 463
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 7/165 (4%)
Query: 361 VFEQMPSKT-VVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRI 419
+F + KT V SW S+I + G + E F M L PT S + AC +
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGD-SAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL 89
Query: 420 ASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMI 479
G++ H G + DI VS+A+I MY G + A VF E+ +++ +SW+ MI
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149
Query: 480 FGCSLHGQGKLGVDLFRQL-----ERNSEAPLDDNIYAAALHACS 519
G L+G V LF+ L + + LD + + ACS
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACS 194
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 310 bits (793), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 213/726 (29%), Positives = 340/726 (46%), Gaps = 16/726 (2%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+FD+ PE + +++ TL + + P+ + + H + S A
Sbjct: 105 NLFDEMPERNNVSFVTLAQGYACQD--PIGLYSRLHREGHELNPHVFTSFLKLFVSLDKA 162
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
+ + LH+ VKL S A ALI+ Y+ + A+T+F+ W +
Sbjct: 163 E--ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVS 220
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
YV G +L+L M +G+ + VH +K
Sbjct: 221 CYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVL 280
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
+ LL++Y G M DA VF +MP DVV W+ MI QNG +EA++LF RM
Sbjct: 281 DPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMR 340
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGA 354
E V P+ +S++L C + G ++HG +V+ G + D+ +SN L+ +YA C
Sbjct: 341 -EAFVV-PNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEK 398
Query: 355 SRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILP 414
A +F ++ SK VSW ++I GY + G + F +FR+ + T V+ SS L
Sbjct: 399 MDTAVKLFAELSSKNEVSWNTVIVGY-ENLGEGGKAFSMFREALRNQVSVTEVTFSSALG 457
Query: 415 ACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTIS 474
AC +AS G ++HG ++ + VSN++IDMY K G I A +VF EM D S
Sbjct: 458 ACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVAS 517
Query: 475 WSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCF--- 531
W+ +I G S HG G+ + + ++ P + + L CS A + ++G+ CF
Sbjct: 518 WNALISGYSTHGLGRQALRILDIMKDRDCKP-NGLTFLGVLSGCSNAGLIDQGQECFESM 576
Query: 532 --NHIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYAL 589
+H P + H V LL R G D+AM I E + R +L
Sbjct: 577 IRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEF 636
Query: 590 GKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYRE 649
++ E++ ++ P + YVL+ N +AG + V IR++++E G+K + +W ++
Sbjct: 637 ARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQG 696
Query: 650 KVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEERECTQI-EHSEL 708
VH F G HP K I L+ + G P + L D+D+E + ++ HSE
Sbjct: 697 DVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSER 756
Query: 709 LALAFGLI--SSQAGPIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHC 766
LALA+GL+ S I + KN R+C CH K +S + R+++++D N FHHF G C
Sbjct: 757 LALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVC 816
Query: 767 TCEDFW 772
+C D W
Sbjct: 817 SCGDHW 822
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 146/304 (48%), Gaps = 8/304 (2%)
Query: 219 QGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCV 278
+ +H +K G ++FA+N LL YV G +DA +F++MP ++ VS+ ++ +G
Sbjct: 67 SAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA 126
Query: 279 QNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECD 338
+ + L+ R++ EG + P + ++ L + + + +H +V+ G + +
Sbjct: 127 ----CQDPIGLYSRLHREGHELNPHV--FTSFLKLFVSLDKAEICPWLHSPIVKLGYDSN 180
Query: 339 VLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMN 398
+ L+ Y+ CG+ AR VFE + K +V W ++ YV+ G F + + +L M
Sbjct: 181 AFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSL-KLLSCMR 239
Query: 399 SEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIA 458
G P + + L A + + + +HG +L+ D V ++ +Y + G ++
Sbjct: 240 MAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMS 299
Query: 459 CALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHAC 518
A VF EM + D + WS MI +G VDLF ++ P ++ ++ L+ C
Sbjct: 300 DAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVP-NEFTLSSILNGC 358
Query: 519 STAR 522
+ +
Sbjct: 359 AIGK 362
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 309 bits (792), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 184/546 (33%), Positives = 295/546 (54%), Gaps = 20/546 (3%)
Query: 238 ASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEG 297
A NS++ Y+ G + DA +F++MP K+V+SWT+MI G QN EA++LF+ N+
Sbjct: 161 AWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFK--NMLR 218
Query: 298 LSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRD 357
+K + V+ C + G ++HG +++ G + +S +L+ YA+C D
Sbjct: 219 CCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGD 278
Query: 358 ARLVFEQMPSKTVVSWTSMIRGYV--KKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPA 415
+R VF++ + V WT+++ GY KK + + +F M + P + +S L +
Sbjct: 279 SRKVFDEKVHEQVAVWTALLSGYSLNKK---HEDALSIFSGMLRNSILPNQSTFASGLNS 335
Query: 416 CGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISW 475
C + + G+E+HG ++ G+E D V N+++ MY SG + A++VF ++ +K +SW
Sbjct: 336 CSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSW 395
Query: 476 SMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCF---- 531
+ +I GC+ HG+GK +F Q+ R ++ P D+ + L ACS E+GR F
Sbjct: 396 NSIIVGCAQHGRGKWAFVIFGQMIRLNKEP-DEITFTGLLSACSHCGFLEKGRKLFYYMS 454
Query: 532 ---NHIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYA 588
NHI I H V +L RCG EA I ++ + V LL CR+H +
Sbjct: 455 SGINHI-DRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVD 513
Query: 589 LGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYR 648
G++ + L+ ++ YVLL N +A G+ V K+R +++ G+ K +W + R
Sbjct: 514 RGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIR 573
Query: 649 EKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDV-DEERECTQIEHSE 707
K H F +GD P I L+ E+++ G P + +LHDV DE++E HSE
Sbjct: 574 GKKHEFFSGD--QPHCSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSE 631
Query: 708 LLALAFGLISSQAG-PIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHC 766
LA+AFGLI++ G + + KN RVC CH K +S V GREI+L+DP FHHFK+G C
Sbjct: 632 RLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTC 691
Query: 767 TCEDFW 772
+C D+W
Sbjct: 692 SCGDYW 697
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 204/470 (43%), Gaps = 23/470 (4%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+FD+ P D ++WN++I + A+ F +M +V + ++
Sbjct: 87 NLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQ 146
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
L Q+ S ++H Y + A LF + WT +
Sbjct: 147 AERLFYQMPVKDTAAWNS--------MVHGYLQFGKVDDALKLFKQMPGKNVISWTTM-- 196
Query: 175 LYVLEGMPRS--ALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL 232
+ L+ RS AL+LF M+ + G VH + +KLG
Sbjct: 197 ICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGF 256
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
E + S SL+ Y +C + D+R VF++ + V WT+++ G N + +A+ +F
Sbjct: 257 LYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSG 316
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADC 352
M S+ P+ ++ L C +G+L G+E+HG V+ G+E D + N+L+ MY+D
Sbjct: 317 MLRN--SILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDS 374
Query: 353 GASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSI 412
G DA VF ++ K++VSW S+I G + G F +F +M +P ++ + +
Sbjct: 375 GNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGR-GKWAFVIFGQMIRLNKEPDEITFTGL 433
Query: 413 LPACGRIASHKHGREIHGYLLR--NGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK 470
L AC + GR++ Y+ N ++ I ++D+ + G + A + M K
Sbjct: 434 LSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVK 493
Query: 471 -DTISWSMMIFGCSLHG---QGKLGVDLFRQLERNSEAP--LDDNIYAAA 514
+ + W ++ C +H +G+ L+ S A L NIYA+A
Sbjct: 494 PNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASA 543
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 158/326 (48%), Gaps = 31/326 (9%)
Query: 219 QGRDV----HLIAVKLGLEGEVFAS---------NSLLKMYVDCGSMRDARLVFEKMPCK 265
Q R+V HL++ ++ EVF ++ Y + DA +F++MP +
Sbjct: 36 QNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVR 95
Query: 266 DVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLK---H 322
DVVSW SMI GCV+ G+++ A++LF M P+ +VS V G S K
Sbjct: 96 DVVSWNSMISGCVECGDMNTAVKLFDEM--------PERSVVSWTAMVNGCFRSGKVDQA 147
Query: 323 GREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVK 382
R + V+ D N+++ Y G DA +F+QMP K V+SWT+MI G +
Sbjct: 148 ERLFYQMPVK-----DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICG-LD 201
Query: 383 KGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDIN 442
+ + E LF+ M +K T+ + ++ AC + G ++HG +++ G ++
Sbjct: 202 QNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEY 261
Query: 443 VSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNS 502
VS ++I Y I + VF E + W+ ++ G SL+ + + + +F + RNS
Sbjct: 262 VSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNS 321
Query: 503 EAPLDDNIYAAALHACSTARMFEEGR 528
P + + +A+ L++CS + G+
Sbjct: 322 ILP-NQSTFASGLNSCSALGTLDWGK 346
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 308 bits (790), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 212/646 (32%), Positives = 311/646 (48%), Gaps = 53/646 (8%)
Query: 141 LIHLYASLDDIAVAQTLFDKTAPFG--SDCWTFLAKLYVL--EGMPRSALELFHRMVXXX 196
LI Y L A L K FG +D +T+ A + L GM AL++F +M
Sbjct: 288 LIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAG 347
Query: 197 XXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDAR 256
+ + QG +VH IAVK+G +V NSL+ MY CG + DAR
Sbjct: 348 VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDAR 407
Query: 257 LVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGM 316
VF+ + KDV +W SMI G Q G +A ELF RM + +++P+++ +T+
Sbjct: 408 KVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRM--QDANLRPNIITWNTM------ 459
Query: 317 IGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSM 376
I GY ++NG E + + + +M D R+ +W +
Sbjct: 460 ---------ISGY-IKNGDEGEAM--DLFQRMEKDGKVQRN------------TATWNLI 495
Query: 377 IRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNG 436
I GY++ G +E LFRKM P +V+I S+LPAC + K REIHG +LR
Sbjct: 496 IAGYIQNGK-KDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRN 554
Query: 437 VEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFR 496
++ V NA+ D Y KSG I + +F M KD I+W+ +I G LHG + LF
Sbjct: 555 LDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFN 614
Query: 497 QLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLAR 551
Q++ P + ++ + A +EG+ F I P + HC+ V L R
Sbjct: 615 QMKTQGITP-NRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGR 673
Query: 552 CGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLL 611
+EA+ FI+E I+ + L GCRIHG+ + E L LEP N ++
Sbjct: 674 ANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIV 733
Query: 612 LNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICS-A 670
+A KL + + R+ LK +W R +H F TGD S ++C+
Sbjct: 734 SQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQS-----KLCTDV 788
Query: 671 LQGFMEEM-RTEGVEPKWDFSLHDVDEERECTQIEHSELLALAFGLISSQAGP---IRLE 726
L +E+M R + +++ L +E RE T HSE A+AFGLISS IR+
Sbjct: 789 LYPLVEKMSRLDNRSDQYNGELWIEEEGREETCGIHSEKFAMAFGLISSSGASKTTIRIL 848
Query: 727 KNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
KN R+CR CHD AK+VSK G +I+L+D HHFK+G C+C+D+W
Sbjct: 849 KNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/488 (23%), Positives = 197/488 (40%), Gaps = 86/488 (17%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VFD E + W+ +I + N + F M++ V
Sbjct: 136 KVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCG 195
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
D GK +H+ +KL +SS +++ +YA ++ A F + W +
Sbjct: 196 DVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLL 255
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
Y G A+EL M K G+
Sbjct: 256 AYCQNGKHEEAVELVKEM-----------------------------------EKEGISP 280
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMP----CKDVVSWTSMIRGCVQNGELSEAMELF 290
+ N L+ Y G A + +KM DV +WT+MI G + NG +A+++F
Sbjct: 281 GLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMF 340
Query: 291 RRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYA 350
R+M L G V P+ V + + + C + + G E+H V+ G DVL+ N+L+ MY+
Sbjct: 341 RKMFLAG--VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYS 398
Query: 351 DCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSIS 410
CG DAR VF+ + +K V +W SMI GY + G+ + + LF +M L+P ++
Sbjct: 399 KCGKLEDARKVFDSVKNKDVYTWNSMITGYC-QAGYCGKAYELFTRMQDANLRPNIITW- 456
Query: 411 SILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMN-- 468
N +I Y+K+G A+++F M
Sbjct: 457 ----------------------------------NTMISGYIKNGDEGEAMDLFQRMEKD 482
Query: 469 ---EKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACST---AR 522
+++T +W+++I G +G+ ++LFR+++ + P I + L AC+ A+
Sbjct: 483 GKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTIL-SLLPACANLLGAK 541
Query: 523 MFEEGRVC 530
M E C
Sbjct: 542 MVREIHGC 549
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 173/395 (43%), Gaps = 42/395 (10%)
Query: 118 LGKQLHTHAVKLALSSRAHTLI--ALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKL 175
LG+ LH + L + + L+ +YA IA A+ +FD W+ +
Sbjct: 99 LGRILH---ARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGA 155
Query: 176 YVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGE 235
Y E R +LF M+ G + G+ +H + +KLG+
Sbjct: 156 YSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSC 215
Query: 236 VFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNL 295
+ SNS+L +Y CG + A F +M +DV++W S++ QNG+ EA+EL + M
Sbjct: 216 LRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEK 275
Query: 296 EGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGAS 355
EG+S P LV + ++ +G +CD + L++ G +
Sbjct: 276 EGIS--PGLVTWNILIGGYNQLG-----------------KCDAAMD--LMQKMETFGIT 314
Query: 356 RDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPA 415
D V +WT+MI G + G + +FRKM G+ P AV+I S + A
Sbjct: 315 AD------------VFTWTAMISGLIHN-GMRYQALDMFRKMFLAGVVPNAVTIMSAVSA 361
Query: 416 CGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISW 475
C + G E+H ++ G D+ V N+++DMY K G + A VF + KD +W
Sbjct: 362 CSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTW 421
Query: 476 SMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNI 510
+ MI G G +LF +++ +A L NI
Sbjct: 422 NSMITGYCQAGYCGKAYELFTRMQ---DANLRPNI 453
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 160/352 (45%), Gaps = 48/352 (13%)
Query: 215 GSLRQGRDVHLIAVKLGL--EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTS 272
GS+ GR +H + GL E +VF LL MY CG + DAR VF+ M +++ +W++
Sbjct: 95 GSIHLGRILH---ARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSA 151
Query: 273 MIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVR 332
MI + E +LFR M +G V PD + +L C G ++ G+ IH +++
Sbjct: 152 MIGAYSRENRWREVAKLFRLMMKDG--VLPDDFLFPKILQGCANCGDVEAGKVIHSVVIK 209
Query: 333 NGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFR 392
G+ + +SN++L +YA CG A F +M + V++W S++ Y + G + E
Sbjct: 210 LGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGK-HEEAVE 268
Query: 393 LFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYV 452
L ++M EG+ P V+ + + I GY + +A +D+
Sbjct: 269 LVKEMEKEGISPGLVTWNIL---------------IGGY-------NQLGKCDAAMDLMQ 306
Query: 453 KSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYA 512
K +VF +W+ MI G +G +D+FR++ P I
Sbjct: 307 KMETFGITADVF---------TWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTI-M 356
Query: 513 AALHACSTARMFEEGR------VCFNHIRGPMIAHCAQKVSLLARCGLFDEA 558
+A+ ACS ++ +G V I ++ + V + ++CG ++A
Sbjct: 357 SAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSL--VDMYSKCGKLEDA 406
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 118/229 (51%), Gaps = 8/229 (3%)
Query: 279 QNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGV--E 336
+NG L EA + + +G VK + +L C GS+ GR +H R G+ E
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYL--KLLESCIDSGSIHLGRILHA---RFGLFTE 112
Query: 337 CDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRK 396
DV + LL MYA CG DAR VF+ M + + +W++MI Y ++ + EV +LFR
Sbjct: 113 PDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWR-EVAKLFRL 171
Query: 397 MNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGA 456
M +G+ P IL C + G+ IH +++ G+ + VSN+++ +Y K G
Sbjct: 172 MMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGE 231
Query: 457 IACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAP 505
+ A F M E+D I+W+ ++ +G+ + V+L +++E+ +P
Sbjct: 232 LDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISP 280
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 10/193 (5%)
Query: 380 YVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGV-- 437
Y+ + G E + + +G K + +L +C S GR +H R G+
Sbjct: 55 YLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFT 111
Query: 438 EFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQ 497
E D+ V ++ MY K G IA A VF M E++ +WS MI S + + LFR
Sbjct: 112 EPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRL 171
Query: 498 LERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRGPMIAHCAQK----VSLLARCG 553
+ ++ P DD ++ L C+ E G+V + + ++ C + +++ A+CG
Sbjct: 172 MMKDGVLP-DDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCG 230
Query: 554 LFDEAMVFIREQK 566
D A F R +
Sbjct: 231 ELDFATKFFRRMR 243
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 308 bits (789), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 195/761 (25%), Positives = 347/761 (45%), Gaps = 77/761 (10%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
+++FD+ P+ D LAWN ++ +L + ++ A+ F +M
Sbjct: 43 NKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNK 102
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAP---------- 163
F+ G+Q+H + ++L L S +LI +Y+ + +++ +F+
Sbjct: 103 EGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSIL 162
Query: 164 -------FGSDC------------------WTFLAKLYVLEGMPRSALELFHRMVXXXXX 198
+ D W L Y +G+ + A+ + RM
Sbjct: 163 SSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLK 222
Query: 199 XXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLV 258
G L+ G+ +H ++ L +V+ +L+ MY+ G + AR+V
Sbjct: 223 PSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMV 282
Query: 259 FEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIG 318
F+ M K++V+W S++ G L +A L RM EG +KPD + +++ +G
Sbjct: 283 FDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEG--IKPDAITWNSLASGYATLG 340
Query: 319 SLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIR 378
+ ++ G + GV + VVSWT++
Sbjct: 341 KPEKALDVIGKMKEKGV-------------------------------APNVVSWTAIFS 369
Query: 379 GYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVE 438
G K G F N ++F KM EG+ P A ++S++L G ++ G+E+HG+ LR +
Sbjct: 370 GCSKNGNFRN-ALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLI 428
Query: 439 FDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQL 498
D V+ A++DMY KSG + A+ +F + K SW+ M+ G ++ G+G+ G+ F +
Sbjct: 429 CDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVM 488
Query: 499 ERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCG 553
P D + + L C + + +EG F+ +R P I HC+ V LL R G
Sbjct: 489 LEAGMEP-DAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSG 547
Query: 554 LFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLN 613
DEA FI+ ++ + L C+IH + L + ++L LEP N+ NY++++N
Sbjct: 548 YLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMIN 607
Query: 614 WHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQG 673
++ + + V++IR +R ++ + +W + VH+F +HP + +I L
Sbjct: 608 LYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYK 667
Query: 674 FMEEMRTEGVEPKWDFSLHDV-DEERECTQIEHSELLALAFGLISSQA-GPIRLEKNSRV 731
+ EM+ G P D+ D E+E + H+E LA+ +GLI + PIR+ KN+ +
Sbjct: 668 LVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNI 727
Query: 732 CRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
C H AK++S + REI+L++ HHF+ G C+C D W
Sbjct: 728 CSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 219/486 (45%), Gaps = 59/486 (12%)
Query: 220 GRDVHLIAVKLGLEG-EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCV 278
G +H +K GL+ + ++ + Y C S+ A +F++MP +D ++W ++ +
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 279 QNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECD 338
++G +A+ELFR M G D MV +L VC GR+IHGY++R G+E +
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAY-DSTMVK-LLQVCSNKEGFAEGRQIHGYVLRLGLESN 123
Query: 339 VLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKG-------------- 384
V + N+L+ MY+ G +R VF M + + SW S++ Y K G
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 385 --------------------GFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKH 424
G + + + ++M GLKP+ SISS+L A K
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 425 GREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSL 484
G+ IHGY+LRN + +D+ V +IDMY+K+G + A VF M+ K+ ++W+ ++ G S
Sbjct: 244 GKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSY 303
Query: 485 HGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR----GPMIA 540
K L ++E+ P D + + +T E+ ++ P +
Sbjct: 304 ACLLKDAEALMIRMEKEGIKP-DAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVV 362
Query: 541 HCAQKVSLLARCGLFDEAM-VFIR--EQKIEQHPEVLRKLLEGCRIHGEYAL---GKQVI 594
S ++ G F A+ VFI+ E+ + + + LL +I G +L GK+V
Sbjct: 363 SWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL---KILGCLSLLHSGKEV- 418
Query: 595 EQLCELEPLNAENYV--LLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVH 652
C + L + YV L++ + G L +I G+K K +W
Sbjct: 419 HGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIF-----WGIKNKSLASWNCMLMGYA 473
Query: 653 VFGTGD 658
+FG G+
Sbjct: 474 MFGRGE 479
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 173/415 (41%), Gaps = 46/415 (11%)
Query: 118 LGKQLHTHAVKLAL-SSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLY 176
LG +H +K L +S + A + Y + A LFD+ W + +
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 177 VLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEV 236
+ G A+ELF M +GR +H ++LGLE V
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 237 FASNSLLKMYVDCGSMRDARLVFEKMPCK------------------------------- 265
NSL+ MY G + +R VF M +
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 266 ----DVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLK 321
D+V+W S++ G G +A+ + +RM + GL KP +S++L G LK
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGL--KPSTSSISSLLQAVAEPGHLK 242
Query: 322 HGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYV 381
G+ IHGY++RN + DV + TL+ MY G AR+VF+ M +K +V+W S++ G +
Sbjct: 243 LGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSG-L 301
Query: 382 KKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDI 441
+ L +M EG+KP A++ +S+ + + ++ G + GV ++
Sbjct: 302 SYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNV 361
Query: 442 NVSNAVIDMYVKSGAIACALNVFGEMNEKD------TISWSMMIFGC-SLHGQGK 489
A+ K+G AL VF +M E+ T+S + I GC SL GK
Sbjct: 362 VSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGK 416
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 116/259 (44%), Gaps = 21/259 (8%)
Query: 425 GREIHGYLLRNGVE-FDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCS 483
G IHG L++ G++ D V +A + Y + ++ A +F EM ++D ++W+ ++
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 484 LHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHI----RGPMI 539
G + V+LFR+++ S A D+ L CS F EGR ++ +
Sbjct: 66 RSGNWEKAVELFREMQF-SGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 540 AHCAQKVSLLARCGLFD-EAMVF--IREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQ 596
+ C + + +R G + VF ++++ + +L + + L ++ +
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEM--E 182
Query: 597 LCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGT 656
+C L+P + + LL+ +A KG + + ++ GLKP + +L +
Sbjct: 183 ICGLKP-DIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQA------- 234
Query: 657 GDVSHPRKKEICSALQGFM 675
V+ P ++ A+ G++
Sbjct: 235 --VAEPGHLKLGKAIHGYI 251
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 307 bits (787), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/544 (31%), Positives = 297/544 (54%), Gaps = 16/544 (2%)
Query: 236 VFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNL 295
+F N L+ MYV + DA +F++MP ++V+SWT+MI + +A+EL M
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 296 EGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGAS 355
+ +V+P++ S+VL C + + R +H +++ G+E DV + + L+ ++A G
Sbjct: 156 D--NVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEP 210
Query: 356 RDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPA 415
DA VF++M + + W S+I G+ + ++ LF++M G +++S+L A
Sbjct: 211 EDALSVFDEMVTGDAIVWNSIIGGFAQNSR-SDVALELFKRMKRAGFIAEQATLTSVLRA 269
Query: 416 CGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISW 475
C +A + G + H ++++ + D+ ++NA++DMY K G++ AL VF +M E+D I+W
Sbjct: 270 CTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITW 327
Query: 476 SMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR 535
S MI G + +G + + LF +++ + P I L ACS A + E+G F ++
Sbjct: 328 STMISGLAQNGYSQEALKLFERMKSSGTKPNYITI-VGVLFACSHAGLLEDGWYYFRSMK 386
Query: 536 -----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALG 590
P+ H + LL + G D+A+ + E + E R LL CR+ L
Sbjct: 387 KLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLA 446
Query: 591 KQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREK 650
+ +++ L+P +A Y LL N +A K D V++IR +R+RG+K + C+W ++
Sbjct: 447 EYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQ 506
Query: 651 VHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVD-EERECTQIEHSELL 709
+H F GD SHP+ E+ L + + G P+ +F L D++ E+ E + HSE L
Sbjct: 507 IHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKL 566
Query: 710 ALAFGLISSQAGP-IRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTC 768
ALAFGL++ IR+ KN R+C CH F K SK+ R I+++DP +HHF+ G C+C
Sbjct: 567 ALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSC 626
Query: 769 EDFW 772
D+W
Sbjct: 627 GDYW 630
Score = 150 bits (379), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 169/352 (48%), Gaps = 18/352 (5%)
Query: 140 ALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXX 199
LI++Y + + A LFD+ WT + Y + + ALEL M+
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRP 160
Query: 200 XXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVF 259
M +R +H +K GLE +VF ++L+ ++ G DA VF
Sbjct: 161 NVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVF 217
Query: 260 EKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGS 319
++M D + W S+I G QN A+ELF+RM G + +++VL C +
Sbjct: 218 DEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQ--ATLTSVLRACTGLAL 275
Query: 320 LKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRG 379
L+ G + H ++V+ + D++L+N L+ MY CG+ DA VF QM + V++W++MI G
Sbjct: 276 LELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG 333
Query: 380 YVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRN---- 435
+ + G++ E +LF +M S G KP ++I +L AC SH E Y R+
Sbjct: 334 -LAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFAC----SHAGLLEDGWYYFRSMKKL 388
Query: 436 -GVEFDINVSNAVIDMYVKSGAIACALNVFGEMN-EKDTISWSMMIFGCSLH 485
G++ +ID+ K+G + A+ + EM E D ++W ++ C +
Sbjct: 389 YGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQ 440
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 119/270 (44%), Gaps = 7/270 (2%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
HQ+FD+ P+ + ++W T+I + A+ MLR V +
Sbjct: 116 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGM 175
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
+D + LH +K L S ALI ++A L + A ++FD+ + W +
Sbjct: 176 SDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSII 232
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
+ ALELF RM + L G H+ VK +
Sbjct: 233 GGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKY--D 290
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
++ +N+L+ MY CGS+ DA VF +M +DV++W++MI G QNG EA++LF RM
Sbjct: 291 QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERM 350
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHG 323
G KP+ + + VL C G L+ G
Sbjct: 351 KSSG--TKPNYITIVGVLFACSHAGLLEDG 378
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 142/299 (47%), Gaps = 12/299 (4%)
Query: 271 TSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYL 330
+ R C Q +L AM+ + GL D S ++ C ++ G I +L
Sbjct: 31 SEFTRLCYQR-DLPRAMKAMDSLQSHGLWA--DSATYSELIKCCISNRAVHEGNLICRHL 87
Query: 331 VRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEV 390
NG + L N L+ MY DA +F+QMP + V+SWT+MI Y K + +
Sbjct: 88 YFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAY-SKCKIHQKA 146
Query: 391 FRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDM 450
L M + ++P + SS+L +C ++ R +H +++ G+E D+ V +A+ID+
Sbjct: 147 LELLVLMLRDNVRPNVYTYSSVLRSCNGMSD---VRMLHCGIIKEGLESDVFVRSALIDV 203
Query: 451 YVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNI 510
+ K G AL+VF EM D I W+ +I G + + + + ++LF++++R +
Sbjct: 204 FAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIA-EQAT 262
Query: 511 YAAALHACSTARMFEEGRVCFNHI---RGPMIAHCAQKVSLLARCGLFDEAMVFIREQK 566
+ L AC+ + E G HI +I + A V + +CG ++A+ + K
Sbjct: 263 LTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNAL-VDMYCKCGSLEDALRVFNQMK 320
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 188/570 (32%), Positives = 306/570 (53%), Gaps = 15/570 (2%)
Query: 214 MGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSM 273
+ S+R + V+ + G E E + N +L M+V CG + DAR +F+++P +++ S+ S+
Sbjct: 136 LKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSI 195
Query: 274 IRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN 333
I G V G EA ELF+ M E LS + + +L +GS+ G+++H ++
Sbjct: 196 ISGFVNFGNYVEAFELFKMM-WEELS-DCETHTFAVMLRASAGLGSIYVGKQLHVCALKL 253
Query: 334 GVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRL 393
GV + +S L+ MY+ CG DAR FE MP KT V+W ++I GY G ++ E L
Sbjct: 254 GVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHG-YSEEALCL 312
Query: 394 FRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVK 453
M G+ ++S ++ ++A + ++ H L+RNG E +I + A++D Y K
Sbjct: 313 LYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSK 372
Query: 454 SGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAA 513
G + A VF ++ K+ ISW+ ++ G + HG+G V LF ++ + AP + + A
Sbjct: 373 WGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAP-NHVTFLA 431
Query: 514 ALHACSTARMFEEGRVCF---NHIRG--PMIAHCAQKVSLLARCGLFDEAMVFIREQKIE 568
L AC+ + + E+G F + + G P H A + LL R GL DEA+ FIR ++
Sbjct: 432 VLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLK 491
Query: 569 QHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIR 628
+ LL CR+ LG+ V E+L + P NYV++ N + GK +
Sbjct: 492 TTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVL 551
Query: 629 ETIRERGLKPKKACTWTLYREKVHVFGTGD----VSHPRKKEICSALQGFMEEMRTEGVE 684
ET+ +GL ACTW ++ H F +GD + K++I + MEE+ G
Sbjct: 552 ETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGYS 611
Query: 685 PKWDFSLHDVDE-ERECTQIEHSELLALAFGLISS-QAGPIRLEKNSRVCRGCHDFAKFV 742
+ L DVDE E E HSE LA+A+GL+++ + P+++ +N R+C+ CH +F+
Sbjct: 612 EEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFI 671
Query: 743 SKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
S VTGRE++++D + FHHFK G C+C +W
Sbjct: 672 SLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 173/400 (43%), Gaps = 43/400 (10%)
Query: 139 IALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXX 198
I L+H+ + I A+ LFD+ + + +V G A ELF M
Sbjct: 164 ILLMHVKCGM--IIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSD 221
Query: 199 XXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLV 258
+GS+ G+ +H+ A+KLG+ F S L+ MY CG + DAR
Sbjct: 222 CETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCA 281
Query: 259 FEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIG 318
FE MP K V+W ++I G +G EA+ L M G+S+ D +S ++ + +
Sbjct: 282 FECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSI--DQFTLSIMIRISTKLA 339
Query: 319 SLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIR 378
L+ ++ H L+RNG E +++ + L+ Y+ G AR VF+++P K ++SW +++
Sbjct: 340 KLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMG 399
Query: 379 GYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVE 438
GY G + V +LF KM + + P V+ ++L AC + G EI
Sbjct: 400 GYANHGRGTDAV-KLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEI---------- 448
Query: 439 FDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQL 498
F M+E I M + C + G+ G+ L +
Sbjct: 449 -------------------------FLSMSEVHGIKPRAMHYACMIELLGRDGL-LDEAI 482
Query: 499 ERNSEAPLDD--NIYAAALHACSTARMFEEGRVCFNHIRG 536
APL N++AA L+AC E GRV + G
Sbjct: 483 AFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYG 522
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 123/243 (50%), Gaps = 3/243 (1%)
Query: 265 KDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGR 324
K V+ S I V EA ELF + + S K + ++ C + S++ +
Sbjct: 85 KSGVTICSQIEKLVLCNRFREAFELFEILEIR-CSFKVGVSTYDALVEACIRLKSIRCVK 143
Query: 325 EIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKG 384
++G+++ NG E + + N +L M+ CG DAR +F+++P + + S+ S+I G+V G
Sbjct: 144 RVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFG 203
Query: 385 GFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVS 444
+ E F LF+ M E + + +L A + S G+++H L+ GV + VS
Sbjct: 204 NY-VEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVS 262
Query: 445 NAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEA 504
+IDMY K G I A F M EK T++W+ +I G +LHG + + L + R+S
Sbjct: 263 CGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDM-RDSGV 321
Query: 505 PLD 507
+D
Sbjct: 322 SID 324
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 138/325 (42%), Gaps = 4/325 (1%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
++FD+ PE + ++ ++I ++ ++ A F M AS
Sbjct: 179 RLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLG 238
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
+GKQLH A+KL + LI +Y+ DI A+ F+ + W +
Sbjct: 239 SIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIA 298
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
Y L G AL L + M + L + H ++ G E
Sbjct: 299 GYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFES 358
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
E+ A+ +L+ Y G + AR VF+K+P K+++SW +++ G +G ++A++LF +M
Sbjct: 359 EIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMI 418
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVR-NGVECDVLLSNTLLKMYADCG 353
+V P+ V VL C G + G EI + +G++ + ++++ G
Sbjct: 419 --AANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDG 476
Query: 354 ASRDARLVFEQMPSKTVVS-WTSMI 377
+A + P KT V+ W +++
Sbjct: 477 LLDEAIAFIRRAPLKTTVNMWAALL 501
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 305 bits (780), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 206/644 (31%), Positives = 316/644 (49%), Gaps = 34/644 (5%)
Query: 140 ALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXX 199
L+ Y I A+ +F+ WT + K Y+ EGM A LF RM
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVS 143
Query: 200 XXXXXXXXXXXXXMMGSLRQGRDVH-LIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLV 258
G + + R ++ ++ VK +V AS +++ G + +ARL+
Sbjct: 144 WTVMFGGLIDD----GRIDKARKLYDMMPVK-----DVVASTNMIGGLCREGRVDEARLI 194
Query: 259 FEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCG--M 316
F++M ++VV+WT+MI G QN + A +LF M P+ VS + G +
Sbjct: 195 FDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM--------PEKTEVSWTSMLLGYTL 246
Query: 317 IGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSM 376
G ++ E + V+ N ++ + + G AR VF+ M + +W M
Sbjct: 247 SGRIEDAEEFFEVMPMK----PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGM 302
Query: 377 IRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNG 436
I+ Y +KG F E LF +M +G++P+ S+ SIL C +AS ++GR++H +L+R
Sbjct: 303 IKAYERKG-FELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ 361
Query: 437 VEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFR 496
+ D+ V++ ++ MYVK G + A VF + KD I W+ +I G + HG G+ + +F
Sbjct: 362 FDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFH 421
Query: 497 QLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLAR 551
++ + P + A L ACS A EEG F + P + H + V +L R
Sbjct: 422 EMPSSGTMP-NKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGR 480
Query: 552 CGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLL 611
G D+AM I I+ V LL C+ H L + ++L E EP NA YVLL
Sbjct: 481 AGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLL 540
Query: 612 LNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDV-SHPRKKEICSA 670
+ +A + K V +R+ +R + C+W +KVH+F G + +HP + I
Sbjct: 541 SSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMM 600
Query: 671 LQGFMEEMRTEGVEPKWDFSLHDVDEERECTQI-EHSELLALAFGLISSQAG-PIRLEKN 728
L+ +R G P LHDVDEE + + HSE LA+A+GL+ G PIR+ KN
Sbjct: 601 LEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKN 660
Query: 729 SRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
RVC CH K +SKVT REIIL+D N FHHF +G C+C D+W
Sbjct: 661 LRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 166/398 (41%), Gaps = 69/398 (17%)
Query: 142 IHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXX 201
I + + I A+ FD W + Y G+P+ A +LF M
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMS-------- 75
Query: 202 XXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEK 261
E V + N L+ Y+ + +AR VFE
Sbjct: 76 -------------------------------ERNVVSWNGLVSGYIKNRMIVEARNVFEL 104
Query: 262 MPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMI--GS 319
MP ++VVSWT+M++G +Q G + EA LF RM P+ VS + G+I G
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRM--------PERNEVSWTVMFGGLIDDGR 156
Query: 320 LKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRG 379
+ R+++ + DV+ S ++ G +ARL+F++M + VV+WT+MI G
Sbjct: 157 IDKARKLYDMMPVK----DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITG 212
Query: 380 YVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSIL---PACGRIASHKHGREIHGYLLRNG 436
Y + NN V + RK+ + T VS +S+L GRI + E+
Sbjct: 213 YRQ----NNRV-DVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMK---- 263
Query: 437 VEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFR 496
+ NA+I + + G I+ A VF M ++D +W MI G +DLF
Sbjct: 264 ---PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFA 320
Query: 497 QLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHI 534
Q+++ P ++ + L C+T + GR H+
Sbjct: 321 QMQKQGVRPSFPSLI-SILSVCATLASLQYGRQVHAHL 357
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 92/266 (34%), Gaps = 45/266 (16%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
+VFD + D W +I + A+ F QM + V
Sbjct: 285 RRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATL 344
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
A G+Q+H H V+ + L+ +Y ++ A+ +FD+ + W +
Sbjct: 345 ASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSII 404
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
Y G+ AL++FH M S V LIA+
Sbjct: 405 SGYASHGLGEEALKIFHEMP---------------------SSGTMPNKVTLIAI----- 438
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCV-----QNGELSEAME 288
L G + + +FE M K V+ T C + G++ +AME
Sbjct: 439 ---------LTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAME 489
Query: 289 LFRRMNLEGLSVKPDLVMVSTVLPVC 314
L +E +++KPD + +L C
Sbjct: 490 L-----IESMTIKPDATVWGALLGAC 510
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 305 bits (780), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 195/618 (31%), Positives = 307/618 (49%), Gaps = 67/618 (10%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSM----RD---ARLVFEKMPCKDVV 268
++R +H + +K G + A+ +L+ C + RD A +F +MP ++
Sbjct: 35 TIRDLSQIHAVFIKSGQMRDTLAAAEILRF---CATSDLHHRDLDYAHKIFNQMPQRNCF 91
Query: 269 SWTSMIRGCVQNGELSE--AMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREI 326
SW ++IRG ++ E A+ LF M + V+P+ +VL C G ++ G++I
Sbjct: 92 SWNTIIRGFSESDEDKALIAITLFYEM-MSDEFVEPNRFTFPSVLKACAKTGKIQEGKQI 150
Query: 327 HGYLVRNGVECDVLLSNTLLKMYADCGASRDAR--------------------------- 359
HG ++ G D + + L++MY CG +DAR
Sbjct: 151 HGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVL 210
Query: 360 ------------------LVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEG 401
++F++M ++VVSW +MI GY G F + V +FR+M
Sbjct: 211 WNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAV-EVFREMKKGD 269
Query: 402 LKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACAL 461
++P V++ S+LPA R+ S + G +H Y +G+ D + +A+IDMY K G I A+
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329
Query: 462 NVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTA 521
+VF + ++ I+WS MI G ++HGQ +D F ++ + P D Y L ACS
Sbjct: 330 HVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRP-SDVAYINLLTACSHG 388
Query: 522 RMFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRK 576
+ EEGR F+ + P I H V LL R GL DEA FI I+ + +
Sbjct: 389 GLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKA 448
Query: 577 LLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGL 636
LL CR+ G +GK+V L ++ P ++ YV L N +A +G V ++R ++E+ +
Sbjct: 449 LLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDI 508
Query: 637 KPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDE 696
+ C+ +H F D SHP+ KEI S L +++R G P L +++E
Sbjct: 509 RKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEE 568
Query: 697 E-RECTQIEHSELLALAFGLISSQAG-PIRLEKNSRVCRGCHDFAKFVSKVTGREIILKD 754
E +E HSE +A AFGLIS+ G PIR+ KN R+C CH K +SKV R+I ++D
Sbjct: 569 EDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRD 628
Query: 755 PNFFHHFKHGHCTCEDFW 772
FHHF+ G C+C D+W
Sbjct: 629 RKRFHHFQDGSCSCMDYW 646
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 199/445 (44%), Gaps = 68/445 (15%)
Query: 54 HQVFDKSPEWDTLAWNTLIH--THLSNNHFPLAISTFTQMLRHA-VXXXXXXXXXXXXAS 110
H++F++ P+ + +WNT+I + + +AI+ F +M+ V A
Sbjct: 79 HKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKAC 138
Query: 111 RLAADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWT 170
GKQ+H A+K FG D +
Sbjct: 139 AKTGKIQEGKQIHGLALKYG---------------------------------FGGDEFV 165
Query: 171 F--LAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAV 228
L ++YV+ G + A LF++ + +D+ ++
Sbjct: 166 MSNLVRMYVMCGFMKDARVLFYKNIIE-------------------------KDMVVMTD 200
Query: 229 KLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAME 288
+ +GE+ N ++ Y+ G + AR++F+KM + VVSW +MI G NG +A+E
Sbjct: 201 RRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVE 260
Query: 289 LFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKM 348
+FR M + ++P+ V + +VLP +GSL+ G +H Y +G+ D +L + L+ M
Sbjct: 261 VFREM--KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDM 318
Query: 349 YADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVS 408
Y+ CG A VFE++P + V++W++MI G+ G + + F KM G++P+ V+
Sbjct: 319 YSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAI-DCFCKMRQAGVRPSDVA 377
Query: 409 ISSILPACGRIASHKHGREIHGYLLR-NGVEFDINVSNAVIDMYVKSGAIACALNVFGEM 467
++L AC + GR ++ +G+E I ++D+ +SG + A M
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 468 NEK-DTISWSMMIFGCSLHGQGKLG 491
K D + W ++ C + G ++G
Sbjct: 438 PIKPDDVIWKALLGACRMQGNVEMG 462
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 139/335 (41%), Gaps = 63/335 (18%)
Query: 310 VLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGAS----RD---ARLVF 362
+ P +++ +IH +++G D L + +L+ C S RD A +F
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRF---CATSDLHHRDLDYAHKIF 82
Query: 363 EQMPSKTVVSWTSMIRGYVKKGGFNN--EVFRLFRKMNSEGLKPTAVSISSILPACGRIA 420
QMP + SW ++IRG+ + + + M+ E ++P + S+L AC +
Sbjct: 83 NQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTG 142
Query: 421 SHKHGREIHGYLLRNG--------------------------------VEFDINVS---- 444
+ G++IHG L+ G +E D+ V
Sbjct: 143 KIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRR 202
Query: 445 ---------NAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLF 495
N +ID Y++ G A +F +M ++ +SW+ MI G SL+G K V++F
Sbjct: 203 KRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVF 262
Query: 496 RQLERNSEAPLDDNIYAAALHACSTARMFEEGRV--CFNHIRGPMIAHC--AQKVSLLAR 551
R++++ P + + L A S E G + G I + + + ++
Sbjct: 263 REMKKGDIRP-NYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSK 321
Query: 552 CGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGE 586
CG+ ++A + + E+ ++ ++ G IHG+
Sbjct: 322 CGIIEKA-IHVFERLPRENVITWSAMINGFAIHGQ 355
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 303 bits (775), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 182/547 (33%), Positives = 292/547 (53%), Gaps = 21/547 (3%)
Query: 240 NSLLKMYVDCGSMRDARLVFEKMPCKDVVS---WTSMIRGCVQNGELSEAMELFRRMNLE 296
+ L+ ++ C + AR +F+ + +++ W +M G +NG +A+ ++ M
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCS 230
Query: 297 GLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASR 356
++P +S L C + L+ GR IH +V+ + D ++ N LLK+Y + G
Sbjct: 231 --FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFD 288
Query: 357 DARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPAC 416
DAR VF+ M + VV+W S+I KK + E+F LFRKM E + + ++++ILPAC
Sbjct: 289 DARKVFDGMSERNVVTWNSLISVLSKKVRVH-EMFNLFRKMQEEMIGFSWATLTTILPAC 347
Query: 417 GRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWS 476
R+A+ G+EIH +L++ + D+ + N+++DMY K G + + VF M KD SW+
Sbjct: 348 SRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWN 407
Query: 477 MMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR- 535
+M+ +++G + ++LF + + AP D + A L CS + E G F ++
Sbjct: 408 IMLNCYAINGNIEEVINLFEWMIESGVAP-DGITFVALLSGCSDTGLTEYGLSLFERMKT 466
Query: 536 ----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGK 591
P + H A V +L R G EA+ I + + LL CR+HG ++G+
Sbjct: 467 EFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGE 526
Query: 592 QVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKV 651
++L LEP N NYV++ N +A D VDKIRE +++RG+K + C+W ++K+
Sbjct: 527 IAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKI 586
Query: 652 HVFGTGDVSHPRK----KEICSALQGFMEEMRTEGVEPKWDFSLHDVDEERECTQI-EHS 706
+F G R K++ + LQ E + G P LHDVDEE + + HS
Sbjct: 587 QIFVAGGGYEFRNSDEYKKVWTELQ---EAIEKSGYSPNTSVVLHDVDEETKANWVCGHS 643
Query: 707 ELLALAFGLISSQAG-PIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGH 765
E LA + LI + G PIR+ KN RVC CH + K VS+VT R I+L+D FHHF G
Sbjct: 644 ERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGI 703
Query: 766 CTCEDFW 772
C+C+D+W
Sbjct: 704 CSCKDYW 710
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 177/389 (45%), Gaps = 23/389 (5%)
Query: 119 GKQLHTHAVKL--------ALSSRAHTLIALIHLYASLDDIAVAQTLFDK---TAPFGSD 167
K LH H +K+ +L L LI L++ + +A+ +FD ++
Sbjct: 144 AKSLH-HGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEK 202
Query: 168 CWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIA 227
W +A Y G PR AL ++ M+ + LR GR +H
Sbjct: 203 VWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQI 262
Query: 228 VKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAM 287
VK + + N LLK+Y++ G DAR VF+ M ++VV+W S+I + + E
Sbjct: 263 VKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMF 322
Query: 288 ELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLK 347
LFR+M E + ++T+LP C + +L G+EIH ++++ + DV L N+L+
Sbjct: 323 NLFRKMQEEMIGF--SWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMD 380
Query: 348 MYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAV 407
MY CG +R VF+ M +K + SW M+ Y G EV LF M G+ P +
Sbjct: 381 MYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNI-EEVINLFEWMIESGVAPDGI 439
Query: 408 SISSILPACGRIASHKHGREIHGYLLRNGVEFDINVS----NAVIDMYVKSGAIACALNV 463
+ ++L C ++G + R EF ++ + ++D+ ++G I A+ V
Sbjct: 440 TFVALLSGCSDTGLTEYGLSL---FERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKV 496
Query: 464 FGEMNEKDTIS-WSMMIFGCSLHGQGKLG 491
M K + S W ++ C LHG +G
Sbjct: 497 IETMPFKPSASIWGSLLNSCRLHGNVSVG 525
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 302 bits (773), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 179/588 (30%), Positives = 294/588 (50%), Gaps = 13/588 (2%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAAD 115
VFD+ PE D W ++ + N + + +++H A D
Sbjct: 98 VFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQD 157
Query: 116 FSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKL 175
GK++H VK+ S L L+ +YA +I A +F+ CWT +
Sbjct: 158 LDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAG 216
Query: 176 YVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGE 235
YV + L LF+RM + +L QG+ H VK G+E
Sbjct: 217 YVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELS 276
Query: 236 VFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNL 295
SLL MYV CG + +AR VF + D+V WT+MI G NG ++EA+ LF++M
Sbjct: 277 SCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM-- 334
Query: 296 EGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGAS 355
+G+ +KP+ V +++VL CG+I +L+ GR +HG ++ G+ D ++N L+ MYA C +
Sbjct: 335 KGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQN 393
Query: 356 RDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPA 415
RDA+ VFE K +V+W S+I G+ + G + +F LF +MNSE + P V+++S+ A
Sbjct: 394 RDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALF-LFHRMNSESVTPNGVTVASLFSA 452
Query: 416 CGRIASHKHGREIHGYLLRNG--VEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTI 473
C + S G +H Y ++ G ++V A++D Y K G A +F + EK+TI
Sbjct: 453 CASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTI 512
Query: 474 SWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNH 533
+WS MI G G ++LF ++ + + P +++ + + L AC M EG+ F+
Sbjct: 513 TWSAMIGGYGKQGDTIGSLELFEEMLKKQQKP-NESTFTSILSACGHTGMVNEGKKYFSS 571
Query: 534 IR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYA 588
+ P H V +LAR G ++A+ I + I+ L GC +H +
Sbjct: 572 MYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFD 631
Query: 589 LGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGL 636
LG+ VI+++ +L P +A YVL+ N +A G+ + ++R +++RGL
Sbjct: 632 LGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGL 679
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 159/313 (50%), Gaps = 8/313 (2%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIR 275
SLRQ H + GL G++ + L+ +Y G +DARLVF+++P D W M+R
Sbjct: 59 SLRQS---HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLR 115
Query: 276 GCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGV 335
N E E ++L+ + G + D ++ S L C + L +G++IH LV+
Sbjct: 116 CYCLNKESVEVVKLYDLLMKHGF--RYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPS 173
Query: 336 ECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFR 395
+V+L+ LL MYA CG + A VF + + VV WTSMI GYVK E LF
Sbjct: 174 FDNVVLTG-LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKN-DLCEEGLVLFN 231
Query: 396 KMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSG 455
+M + + +++ AC ++++ G+ HG L+++G+E + +++DMYVK G
Sbjct: 232 RMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCG 291
Query: 456 AIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAAL 515
I+ A VF E + D + W+ MI G + +G + LF++++ P I A+ L
Sbjct: 292 DISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTI-ASVL 350
Query: 516 HACSTARMFEEGR 528
C E GR
Sbjct: 351 SGCGLIENLELGR 363
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 131/315 (41%), Gaps = 6/315 (1%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VF++ D + W +I + N A+S F +M + L
Sbjct: 298 RVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIE 357
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
+ LG+ +H ++K+ + + AL+H+YA A+ +F+ + W +
Sbjct: 358 NLELGRSVHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIIS 416
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL-- 232
+ G AL LFHRM +GSL G +H +VKLG
Sbjct: 417 GFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLA 476
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
V +LL Y CG + ARL+F+ + K+ ++W++MI G + G+ ++ELF
Sbjct: 477 SSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEE 536
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN-GVECDVLLSNTLLKMYAD 351
M + KP+ +++L CG G + G++ + ++ ++ M A
Sbjct: 537 MLKK--QQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLAR 594
Query: 352 CGASRDARLVFEQMP 366
G A + E+MP
Sbjct: 595 AGELEQALDIIEKMP 609
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 6/219 (2%)
Query: 310 VLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKT 369
+L C I SL R+ HG L NG+ D+ ++ L+ +Y G ++DARLVF+Q+P
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 370 VVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIH 429
W M+R Y + EV +L+ + G + + S L AC + +G++IH
Sbjct: 107 FYLWKVMLRCYCLNKE-SVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIH 165
Query: 430 GYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGK 489
L++ FD V ++DMY K G I A VF ++ ++ + W+ MI G + +
Sbjct: 166 CQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCE 224
Query: 490 LGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGR 528
G+ LF ++ N+ ++ Y + AC+ +G+
Sbjct: 225 EGLVLFNRMRENNVLG-NEYTYGTLIMACTKLSALHQGK 262
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 301 bits (772), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 176/569 (30%), Positives = 286/569 (50%), Gaps = 7/569 (1%)
Query: 118 LGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYV 177
G+Q+H VK+ L + + +L+ +Y+ + A+T+F + W + Y
Sbjct: 290 FGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYA 349
Query: 178 LEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVF 237
SAL+LF M ++G G+ VH K ++
Sbjct: 350 ENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTST 409
Query: 238 ASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEG 297
++LL +Y CG DA LVF+ M KD+V+W S+I G +NG+ EA+++F M +
Sbjct: 410 IESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDD 469
Query: 298 LSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRD 357
S+KPD ++++V C + +L+ G ++HG +++ G+ +V + ++L+ +Y+ CG
Sbjct: 470 DSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEM 529
Query: 358 ARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACG 417
A VF M ++ +V+W SMI Y + LF M S+G+ P +VSI+S+L A
Sbjct: 530 ALKVFTSMSTENMVAWNSMISCY-SRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAIS 588
Query: 418 RIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSM 477
AS G+ +HGY LR G+ D ++ NA+IDMYVK G A N+F +M K I+W++
Sbjct: 589 STASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNL 648
Query: 478 MIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG- 536
MI+G HG + LF ++++ E+P DD + + + AC+ + EEG+ F ++
Sbjct: 649 MIYGYGSHGDCITALSLFDEMKKAGESP-DDVTFLSLISACNHSGFVEEGKNIFEFMKQD 707
Query: 537 ----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQ 592
P + H A V LL R GL +EA FI+ IE + LL R H LG
Sbjct: 708 YGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGIL 767
Query: 593 VIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVH 652
E+L +EP YV L+N + G + K+ ++E+GL + C+W ++ +
Sbjct: 768 SAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTN 827
Query: 653 VFGTGDVSHPRKKEICSALQGFMEEMRTE 681
VF +G S P K EI + L M E
Sbjct: 828 VFFSGGSSSPMKAEIFNVLNRLKSNMVDE 856
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/470 (25%), Positives = 215/470 (45%), Gaps = 14/470 (2%)
Query: 64 DTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAADF--SLGKQ 121
D WN++I + F + F +ML V +F GKQ
Sbjct: 132 DVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQ 191
Query: 122 LHTHAVKLALSSRAHTLIALIHLY----ASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYV 177
+H ++ +L + + ALI +Y S+D V + DK+ W + +
Sbjct: 192 IHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVV---LWNVMIVGFG 248
Query: 178 LEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVF 237
G+ S+L+L+ + GR +H VK+GL + +
Sbjct: 249 GSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPY 308
Query: 238 ASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEG 297
SLL MY CG + +A VF + K + W +M+ +N A++LF M +
Sbjct: 309 VCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQK- 367
Query: 298 LSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRD 357
SV PD +S V+ C ++G +G+ +H L + ++ + + LL +Y+ CG D
Sbjct: 368 -SVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPD 426
Query: 358 ARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKM--NSEGLKPTAVSISSILPA 415
A LVF+ M K +V+W S+I G K G F E ++F M + + LKP + ++S+ A
Sbjct: 427 AYLVFKSMEEKDMVAWGSLISGLCKNGKF-KEALKVFGDMKDDDDSLKPDSDIMTSVTNA 485
Query: 416 CGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISW 475
C + + + G ++HG +++ G+ ++ V +++ID+Y K G AL VF M+ ++ ++W
Sbjct: 486 CAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAW 545
Query: 476 SMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFE 525
+ MI S + +L +DLF + P +I + + STA + +
Sbjct: 546 NSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLK 595
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 183/388 (47%), Gaps = 19/388 (4%)
Query: 214 MGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFE-------KMPCKD 266
+ +L G+ +H V LG + F + SL+ MYV CG + A VF+ + +D
Sbjct: 73 LTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARD 132
Query: 267 VVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLK--HGR 324
V W SMI G + E + FRRM + G V+PD +S V+ V G+ + G+
Sbjct: 133 VTVWNSMIDGYFKFRRFKEGVGCFRRMLVFG--VRPDAFSLSIVVSVMCKEGNFRREEGK 190
Query: 325 EIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKT-VVSWTSMIRGYVKK 383
+IHG+++RN ++ D L L+ MY G S DA VF ++ K+ VV W MI G+
Sbjct: 191 QIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGF-GG 249
Query: 384 GGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINV 443
G L+ + +K + S + L AC + + GR+IH +++ G+ D V
Sbjct: 250 SGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYV 309
Query: 444 SNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSE 503
+++ MY K G + A VF + +K W+ M+ + + G +DLF + + S
Sbjct: 310 CTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSV 369
Query: 504 APLDDNIYAAALHACSTARMFEEGRVCFNHI-RGPMIAHCAQKVSLL---ARCGLFDEAM 559
P D + + CS ++ G+ + + P+ + + +LL ++CG +A
Sbjct: 370 LP-DSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAY 428
Query: 560 VFIREQKIEQHPEVLRKLLEGCRIHGEY 587
+ + + E+ L+ G +G++
Sbjct: 429 LVFKSME-EKDMVAWGSLISGLCKNGKF 455
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 168/379 (44%), Gaps = 55/379 (14%)
Query: 269 SWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHG 328
S S IR +Q GE +A+ L+ + + + ++L C + +L +G+ IHG
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSS-PFWTSVFTFPSLLKACSALTNLSYGKTIHG 84
Query: 329 YLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQ-------MPSKTVVSWTSMIRGYV 381
+V G D ++ +L+ MY CG A VF+ + ++ V W SMI GY
Sbjct: 85 SVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYF 144
Query: 382 KKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHK--HGREIHGYLLRNGVEF 439
K F V FR+M G++P A S+S ++ + + + G++IHG++LRN ++
Sbjct: 145 KFRRFKEGV-GCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDT 203
Query: 440 DINVSNAVIDMYVKSGAIACALNVFGEMNEK-DTISWSMMIFGCSLHGQGKLGVDLFRQL 498
D + A+IDMY K G A VF E+ +K + + W++MI G G + +DL+ L
Sbjct: 204 DSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY-ML 262
Query: 499 ERNSEAPLDDNIYAAALHACSTARMFEEGR------VCFNHIRGPMIAHCAQKVSLLARC 552
+N+ L + AL ACS + GR V P + C +S+ ++C
Sbjct: 263 AKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYV--CTSLLSMYSKC 320
Query: 553 GLFDE-----------------AMV-----------------FIREQKIEQHPEVLRKLL 578
G+ E AMV F+R++ + L ++
Sbjct: 321 GMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVI 380
Query: 579 EGCRIHGEYALGKQVIEQL 597
C + G Y GK V +L
Sbjct: 381 SCCSVLGLYNYGKSVHAEL 399
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 301 bits (770), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 194/645 (30%), Positives = 311/645 (48%), Gaps = 29/645 (4%)
Query: 141 LIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXX 200
++ +Y + A LFD+ + + T + Y +G+ A+ LF M+
Sbjct: 124 VLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPP 183
Query: 201 XXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFE 260
+L GR +H ++ GL ++ MYV CG + A+ VF+
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFD 243
Query: 261 KMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSL 320
+M K V+ T ++ G Q G +A++LF + EG V+ D + S VL C + L
Sbjct: 244 QMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEG--VEWDSFVFSVVLKACASLEEL 301
Query: 321 KHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGY 380
G++IH + + G+E +V + L+ Y C + A F+++ VSW+++I GY
Sbjct: 302 NLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGY 361
Query: 381 VKKGGFNNEV--FRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVE 438
+ F V F+ R N+ L + + +SI AC +A G ++H ++ +
Sbjct: 362 CQMSQFEEAVKTFKSLRSKNASIL--NSFTYTSIFQACSVLADCNIGGQVHADAIKRSLI 419
Query: 439 FDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQL 498
+A+I MY K G + A VF M+ D ++W+ I G + +G + LF ++
Sbjct: 420 GSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKM 479
Query: 499 ERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR-----GPMIAHCAQKVSLLARCG 553
P + + A L ACS A + E+G+ C + + P I H + + AR G
Sbjct: 480 VSCGMKP-NSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSG 538
Query: 554 LFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLN 613
L DEA+ F++ E + L GC H LG+ E+L +L+P + YVL N
Sbjct: 539 LLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFN 598
Query: 614 WHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQ- 672
+ GK + ++ + + ER LK + +C+W + K+H F GD HP+ +EI L+
Sbjct: 599 LYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKE 658
Query: 673 --GFMEEMRTEGVEPKWDFSLHDVDEERECTQIEHSELLALAFGLIS---SQAGPIRLEK 727
GFME D ++ E RE ++HSE LA+AFGLIS + PI++ K
Sbjct: 659 FDGFMEG----------DMFQCNMTERRE-QLLDHSERLAIAFGLISVHGNAPAPIKVFK 707
Query: 728 NSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
N R C CH+FAK VS VTG EI+++D FHHFK G C+C D+W
Sbjct: 708 NLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/478 (25%), Positives = 205/478 (42%), Gaps = 12/478 (2%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
++FD+ E + ++ T+I + A+ F+ ML +
Sbjct: 139 KLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPR 198
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
G+Q+H H ++ L S ++++Y + A+ +FD+ A T L
Sbjct: 199 ALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMV 258
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
Y G R AL+LF +V + L G+ +H KLGLE
Sbjct: 259 GYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLES 318
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
EV L+ Y+ C S A F+++ + VSW+++I G Q + EA++ F+ +
Sbjct: 319 EVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLR 378
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGA 354
+ S+ S + C ++ G ++H ++ + + L+ MY+ CG
Sbjct: 379 SKNASILNSFTYTS-IFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGC 437
Query: 355 SRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILP 414
DA VFE M + +V+WT+ I G+ G +E RLF KM S G+KP +V+ ++L
Sbjct: 438 LDDANEVFESMDNPDIVAWTAFISGHAYYGN-ASEALRLFEKMVSCGMKPNSVTFIAVLT 496
Query: 415 ACGRIASHKHGREIHGYLLRN-GVEFDINVSNAVIDMYVKSGAIACALNVFGEMN-EKDT 472
AC + G+ +LR V I+ + +ID+Y +SG + AL M E D
Sbjct: 497 ACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDA 556
Query: 473 ISWSMMIFGCSLHGQ---GKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEG 527
+SW + GC H G++ + RQL+ P D Y + + A +EE
Sbjct: 557 MSWKCFLSGCWTHKNLELGEIAGEELRQLD-----PEDTAGYVLPFNLYTWAGKWEEA 609
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 7/171 (4%)
Query: 388 NEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEF-DINVSNA 446
NE F ++M+ G+ ++ S + AC + S HGR +H +R G+E + + N
Sbjct: 65 NEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDR-MRMGIENPSVLLQNC 123
Query: 447 VIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPL 506
V+ MY + ++ A +F EM+E + +S + MI + G V LF + + + P
Sbjct: 124 VLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKP- 182
Query: 507 DDNIYAAALHACSTARMFEEGRVCFNH-IRGPMIAHCAQK---VSLLARCG 553
++Y L + R + GR H IR + ++ + + V++ +CG
Sbjct: 183 PSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCG 233
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 180/593 (30%), Positives = 293/593 (49%), Gaps = 44/593 (7%)
Query: 221 RDVHLIAVKLGLEGEVFASNSLLKMYVDCGS---MRDARLVFEKMPCKDVVSWTSMIRGC 277
+ +H +K GL + +A L + S + A++VF+ D W MIRG
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90
Query: 278 VQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVEC 337
+ E ++ L++RM S + ++L C + + + +IH + + G E
Sbjct: 91 SCSDEPERSLLLYQRMLCS--SAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEN 148
Query: 338 DVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKG------------- 384
DV N+L+ YA G + A L+F+++P VSW S+I+GYVK G
Sbjct: 149 DVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMA 208
Query: 385 -----------------GFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGRE 427
N E +LF +M + ++P VS+++ L AC ++ + + G+
Sbjct: 209 EKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKW 268
Query: 428 IHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQ 487
IH YL + + D + +IDMY K G + AL VF + +K +W+ +I G + HG
Sbjct: 269 IHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGH 328
Query: 488 GKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCF-----NHIRGPMIAHC 542
G+ + F ++++ P + + A L ACS + EEG++ F ++ P I H
Sbjct: 329 GREAISKFMEMQKMGIKP-NVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHY 387
Query: 543 AQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEP 602
V LL R GL DEA FI+E ++ + + LL+ CRIH LG+++ E L ++P
Sbjct: 388 GCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDP 447
Query: 603 LNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHP 662
+ YV N HA K D + R ++E+G+ C+ H F GD SHP
Sbjct: 448 YHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHP 507
Query: 663 RKKEICSALQGFMEEMRTEGVEPKWDFSLHDV--DEERECTQIEHSELLALAFGLISSQA 720
++I S + ++ G P+ + L D+ D+ERE +HSE LA+ +GLI ++
Sbjct: 508 EIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKP 567
Query: 721 GP-IRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
G IR+ KN RVC+ CH K +SK+ R+I+++D FHHF+ G C+C D+W
Sbjct: 568 GTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 186/409 (45%), Gaps = 35/409 (8%)
Query: 120 KQLHTHAVKLALSSRAHTLIALIHL---YASLDDIAVAQTLFDKTAPFGSDCWTFLAKLY 176
KQ+H +K L ++ + + S D + AQ +FD + W + + +
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90
Query: 177 VLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEV 236
P +L L+ RM+ + + + +H KLG E +V
Sbjct: 91 SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDV 150
Query: 237 FASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR---- 292
+A NSL+ Y G+ + A L+F+++P D VSW S+I+G V+ G++ A+ LFR+
Sbjct: 151 YAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK 210
Query: 293 ----------------MNLEGLS---------VKPDLVMVSTVLPVCGMIGSLKHGREIH 327
MN E L V+PD V ++ L C +G+L+ G+ IH
Sbjct: 211 NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIH 270
Query: 328 GYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFN 387
YL + + D +L L+ MYA CG +A VF+ + K+V +WT++I GY G
Sbjct: 271 SYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYH-GHG 329
Query: 388 NEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRN-GVEFDINVSNA 446
E F +M G+KP ++ +++L AC + G+ I + R+ ++ I
Sbjct: 330 REAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGC 389
Query: 447 VIDMYVKSGAIACALNVFGEMNEK-DTISWSMMIFGCSLHGQGKLGVDL 494
++D+ ++G + A EM K + + W ++ C +H +LG ++
Sbjct: 390 IVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 438
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 297 bits (761), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 180/532 (33%), Positives = 286/532 (53%), Gaps = 16/532 (3%)
Query: 251 SMRDARLVFEKM--PCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVS 308
SM A +F + PC + +MIRG V EA+ + M G +PD
Sbjct: 81 SMNYAASIFRGIDDPC--TFDFNTMIRGYVNVMSFEEALCFYNEMMQRG--NEPDNFTYP 136
Query: 309 TVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK 368
+L C + S++ G++IHG + + G+E DV + N+L+ MY CG + VFE++ SK
Sbjct: 137 CLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESK 196
Query: 369 TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSE-GLKPTAVSISSILPACGRIASHKHGRE 427
T SW+SM+ G ++ E LFR M SE LK + S L AC + G
Sbjct: 197 TAASWSSMVSARAGMGMWS-ECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMS 255
Query: 428 IHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQ 487
IHG+LLRN E +I V +++DMYVK G + AL++F +M +++ +++S MI G +LHG+
Sbjct: 256 IHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGE 315
Query: 488 GKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG-----PMIAHC 542
G+ + +F ++ + P D +Y + L+ACS + + +EGR F + P H
Sbjct: 316 GESALRMFSKMIKEGLEP-DHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHY 374
Query: 543 AQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEP 602
V LL R GL +EA+ I+ IE++ + R L CR+ LG+ ++L +L
Sbjct: 375 GCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSS 434
Query: 603 LNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHP 662
N +Y+L+ N ++ D V + R I +GLK + + K H F + D SHP
Sbjct: 435 HNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHP 494
Query: 663 RKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEERECTQIE-HSELLALAFGLISSQAG 721
+ KEI L +++ EG P L +VDEE + +++ HS+ +A+AFGL+ + G
Sbjct: 495 KCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPG 554
Query: 722 P-IRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
I++ +N R+C CH + K +S + REI+++D N FH FK G C+C+D+W
Sbjct: 555 SIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 154/306 (50%), Gaps = 4/306 (1%)
Query: 214 MGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSM 273
+ S+R+G+ +H KLGLE +VF NSL+ MY CG M + VFEK+ K SW+SM
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 274 IRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN 333
+ G SE + LFR M E + MVS +L C G+L G IHG+L+RN
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALL-ACANTGALNLGMSIHGFLLRN 263
Query: 334 GVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRL 393
E ++++ +L+ MY CG A +F++M + +++++MI G G R+
Sbjct: 264 ISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGE-GESALRM 322
Query: 394 FRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNG-VEFDINVSNAVIDMYV 452
F KM EGL+P V S+L AC K GR + +L+ G VE ++D+
Sbjct: 323 FSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLG 382
Query: 453 KSGAIACALNVFGEMN-EKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIY 511
++G + AL + EK+ + W + C + +LG ++L + S D +
Sbjct: 383 RAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLL 442
Query: 512 AAALHA 517
+ L++
Sbjct: 443 ISNLYS 448
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 133/316 (42%), Gaps = 5/316 (1%)
Query: 65 TLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAADFSLGKQLHT 124
T +NT+I +++ F A+ + +M++ A GKQ+H
Sbjct: 97 TFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHG 156
Query: 125 HAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRS 184
KL L + +LI++Y ++ ++ +F+K + W+ + GM
Sbjct: 157 QVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSE 216
Query: 185 ALELFHRMVXXXXXXXXXXXXXXXXXX-XMMGSLRQGRDVHLIAVKLGLEGEVFASNSLL 243
L LF M G+L G +H ++ E + SL+
Sbjct: 217 CLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLV 276
Query: 244 KMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPD 303
MYV CG + A +F+KM ++ +++++MI G +GE A+ +F +M EGL +PD
Sbjct: 277 DMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGL--EPD 334
Query: 304 LVMVSTVLPVCGMIGSLKHGREIHGYLVRNG-VECDVLLSNTLLKMYADCGASRDARLVF 362
V+ +VL C G +K GR + +++ G VE L+ + G +A
Sbjct: 335 HVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETI 394
Query: 363 EQMP-SKTVVSWTSMI 377
+ +P K V W + +
Sbjct: 395 QSIPIEKNDVIWRTFL 410
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 183/569 (32%), Positives = 299/569 (52%), Gaps = 16/569 (2%)
Query: 215 GSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDC---GSMRDARLVFEKMPCKDVVSWT 271
SLR+ + A+K +E F + L+ + SM AR +FE M D+V +
Sbjct: 40 NSLRELMQIQAYAIKSHIEDVSFVAK-LINFCTESPTESSMSYARHLFEAMSEPDIVIFN 98
Query: 272 SMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLV 331
SM RG + E LF + +G + PD ++L C + +L+ GR++H +
Sbjct: 99 SMARGYSRFTNPLEVFSLFVEILEDG--ILPDNYTFPSLLKACAVAKALEEGRQLHCLSM 156
Query: 332 RNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVF 391
+ G++ +V + TL+ MY +C AR VF+++ VV + +MI GY ++ NE
Sbjct: 157 KLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNR-PNEAL 215
Query: 392 RLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMY 451
LFR+M + LKP +++ S+L +C + S G+ IH Y ++ + V+ A+IDM+
Sbjct: 216 SLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMF 275
Query: 452 VKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIY 511
K G++ A+++F +M KDT +WS MI + HG+ + + +F ++ + P D+ +
Sbjct: 276 AKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQP-DEITF 334
Query: 512 AAALHACSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQK 566
L+ACS EEGR F+ + P I H V LL+R G ++A FI +
Sbjct: 335 LGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLP 394
Query: 567 IEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDK 626
I P + R LL C H L ++V E++ EL+ + +YV+L N +A K + VD
Sbjct: 395 ISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDS 454
Query: 627 IRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPK 686
+R+ +++R C+ VH F +GD ++ AL ++E++ G P
Sbjct: 455 LRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPD 514
Query: 687 WDFSLHD--VDEERECTQIEHSELLALAFGLISSQAG-PIRLEKNSRVCRGCHDFAKFVS 743
+H D+E+E T HSE LA+ FGL+++ G IR+ KN RVCR CH+ AK +S
Sbjct: 515 TSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLIS 574
Query: 744 KVTGREIILKDPNFFHHFKHGHCTCEDFW 772
+ GR+++L+D FHHF+ G C+C DFW
Sbjct: 575 LIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 146/324 (45%), Gaps = 10/324 (3%)
Query: 55 QVFDKSPEWDTLAWNTLI--HTHLSNNHFPLAI-STFTQMLRHAVXXXXXXXXXXXXASR 111
+F+ E D + +N++ ++ +N PL + S F ++L + A
Sbjct: 84 HLFEAMSEPDIVIFNSMARGYSRFTN---PLEVFSLFVEILEDGILPDNYTFPSLLKACA 140
Query: 112 LAADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTF 171
+A G+QLH ++KL L + LI++Y +D+ A+ +FD+ C+
Sbjct: 141 VAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNA 200
Query: 172 LAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLG 231
+ Y P AL LF M ++GSL G+ +H A K
Sbjct: 201 MITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHS 260
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFR 291
V + +L+ M+ CGS+ DA +FEKM KD +W++MI +G+ ++M +F
Sbjct: 261 FCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFE 320
Query: 292 RMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLV-RNGVECDVLLSNTLLKMYA 350
RM E +V+PD + +L C G ++ GR+ +V + G+ + +++ + +
Sbjct: 321 RMRSE--NVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLS 378
Query: 351 DCGASRDARLVFEQMP-SKTVVSW 373
G DA +++P S T + W
Sbjct: 379 RAGNLEDAYEFIDKLPISPTPMLW 402
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 164/464 (35%), Positives = 269/464 (57%), Gaps = 10/464 (2%)
Query: 317 IGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSM 376
+ ++ G IH ++R+G + + N+LL +YA+CG A VF++MP K +V+W S+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 377 IRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNG 436
I G+ + G E L+ +MNS+G+KP +I S+L AC +I + G+ +H Y+++ G
Sbjct: 61 INGFAENGK-PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 119
Query: 437 VEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFR 496
+ +++ SN ++D+Y + G + A +F EM +K+++SW+ +I G +++G GK ++LF+
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 179
Query: 497 QLERNSEAPLDDNI-YAAALHACSTARMFEEGRVCFNHIR-----GPMIAHCAQKVSLLA 550
+E ++E L I + L+ACS M +EG F +R P I H V LLA
Sbjct: 180 YME-STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 238
Query: 551 RCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVL 610
R G +A +I+ ++ + + R LL C +HG+ L + Q+ +LEP ++ +YVL
Sbjct: 239 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVL 298
Query: 611 LLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSA 670
L N +A + + V KIR+ + G+K + +VH F GD SHP+ I +
Sbjct: 299 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAK 358
Query: 671 LQGFMEEMRTEGVEPKWDFSLHDV-DEERECTQIEHSELLALAFGLISS-QAGPIRLEKN 728
L+ +R+EG P+ DV +EE+E + HSE +A+AF LIS+ + PI + KN
Sbjct: 359 LKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKN 418
Query: 729 SRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
RVC CH K VSKV REI+++D + FHHFK+G C+C+D+W
Sbjct: 419 LRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 172 bits (437), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 165/312 (52%), Gaps = 19/312 (6%)
Query: 214 MGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSM 273
M +R G +H + ++ G ++ NSLL +Y +CG + A VF+KMP KD+V+W S+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 274 IRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN 333
I G +NG+ EA+ L+ MN +G +KPD + ++L C IG+L G+ +H Y+++
Sbjct: 61 INGFAENGKPEEALALYTEMNSKG--IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 118
Query: 334 GVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRL 393
G+ ++ SN LL +YA CG +A+ +F++M K VSWTS+I G + GF E L
Sbjct: 119 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG-LAVNGFGKEAIEL 177
Query: 394 FRKMNS-EGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVS----NAVI 448
F+ M S EGL P ++ IL AC K G E Y R E+ I ++
Sbjct: 178 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE---YFRRMREEYKIEPRIEHFGCMV 234
Query: 449 DMYVKSGAIACALNVFGEMN-EKDTISWSMMIFGCSLHGQGKLGVDLFR----QLERN-- 501
D+ ++G + A M + + + W ++ C++HG L + R QLE N
Sbjct: 235 DLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA-EFARIQILQLEPNHS 293
Query: 502 SEAPLDDNIYAA 513
+ L N+YA+
Sbjct: 294 GDYVLLSNMYAS 305
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 127/270 (47%), Gaps = 11/270 (4%)
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
AD LG+ +H+ ++ S + +L+HLYA+ D+A A +FDK W +
Sbjct: 2 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 61
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
+ G P AL L+ M +G+L G+ VH+ +K+GL
Sbjct: 62 NGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 121
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
+ +SN LL +Y CG + +A+ +F++M K+ VSWTS+I G NG EA+ELF+ M
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Query: 294 -NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVR----NGVECDVLLSNTLLKM 348
+ EGL P + +L C G +K G E Y R +E + ++ +
Sbjct: 182 ESTEGLL--PCEITFVGILYACSHCGMVKEGFE---YFRRMREEYKIEPRIEHFGCMVDL 236
Query: 349 YADCGASRDARLVFEQMPSK-TVVSWTSMI 377
A G + A + MP + VV W +++
Sbjct: 237 LARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
++VFDK PE D +AWN++I+ N A++ +T+M + A
Sbjct: 43 YKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKI 102
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
+LGK++H + +K+ L+ H+ L+ LYA + A+TLFD+ S WT L
Sbjct: 103 GALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLI 162
Query: 174 KLYVLEGMPRSALELFHRM 192
+ G + A+ELF M
Sbjct: 163 VGLAVNGFGKEAIELFKYM 181
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 295 bits (756), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 182/599 (30%), Positives = 292/599 (48%), Gaps = 44/599 (7%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRD--ARLVFEKMPCKDVVSWTSM 273
+L Q + +H ++ GL+ + L++ G D AR V E + ++ WT++
Sbjct: 61 NLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAV 120
Query: 274 IRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN 333
IRG G+ EA+ ++ M E + P S +L CG + L GR+ H R
Sbjct: 121 IRGYAIEGKFDEAIAMYGCMRKE--EITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRL 178
Query: 334 GVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKG--------- 384
C V + NT++ MY C + AR VF++MP + V+SWT +I Y + G
Sbjct: 179 RGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELF 238
Query: 385 ----------------GFNN-----EVFRLFRKMNSEGLKPTAVSISSILPACGRIASHK 423
GF E F +M G++ V+++ + AC ++ + K
Sbjct: 239 ESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASK 298
Query: 424 HGREIHGYLLRNGVEFD--INVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFG 481
+ ++G + + +A+IDMY K G + A+NVF MN K+ ++S MI G
Sbjct: 299 YADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILG 358
Query: 482 CSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG----- 536
+ HG+ + + LF + +E + + AL ACS + + ++GR F+ +
Sbjct: 359 LATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQ 418
Query: 537 PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQ 596
P H V LL R G EA+ I+ +E H V LL CRIH + + E
Sbjct: 419 PTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEH 478
Query: 597 LCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYRE-KVHVFG 655
L ELEP NY+LL N +A G V ++R+ I+E+GLK A +W + + ++H F
Sbjct: 479 LFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFF 538
Query: 656 TGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDV-DEERECTQIEHSELLALAFG 714
G+++HP +I L+ +E + G +P +DV D + I+H+E LALAF
Sbjct: 539 PGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFS 598
Query: 715 LISS-QAGPIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
L+++ + I + KN R+C CH F + S+VTG+ II++D FHHF+ G C+C DFW
Sbjct: 599 LLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 183/444 (41%), Gaps = 58/444 (13%)
Query: 120 KQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTA--------PFGSDCWTF 171
KQ+H H ++ L + L LI +L + V + + PF WT
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIR---TLTKLGVPMDPYARRVIEPVQFRNPF---LWTA 119
Query: 172 LAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLG 231
+ + Y +EG A+ ++ M M L GR H +L
Sbjct: 120 VIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLR 179
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKM----------------------------- 262
V+ N+++ MYV C S+ AR VF++M
Sbjct: 180 GFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFE 239
Query: 263 --PCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSL 320
P KD+V+WT+M+ G QN + EA+E F RM G ++ D V V+ + C +G+
Sbjct: 240 SLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSG--IRADEVTVAGYISACAQLGAS 297
Query: 321 KHGREIHGYLVRNGVECD--VLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIR 378
K+ ++G V++ + L+ MY+ CG +A VF M +K V +++SMI
Sbjct: 298 KYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMIL 357
Query: 379 GYVKKGGFNNEVFRLFRKMNSEG-LKPTAVSISSILPACGRIASHKHGREIHGYLLRN-G 436
G G E LF M ++ +KP V+ L AC GR++ + + G
Sbjct: 358 GLATHGR-AQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFG 416
Query: 437 VEFDINVSNAVIDMYVKSGAIACALNVFGEMN-EKDTISWSMMIFGCSLHGQ---GKLGV 492
V+ + ++D+ ++G + AL + M+ E W ++ C +H ++
Sbjct: 417 VQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAA 476
Query: 493 DLFRQLERN--SEAPLDDNIYAAA 514
+ +LE + L N+YA+A
Sbjct: 477 EHLFELEPDIIGNYILLSNVYASA 500
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 103/197 (52%), Gaps = 5/197 (2%)
Query: 305 VMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRD--ARLVF 362
++VS+++ +L ++IHG+++R G++ + L++ G D AR V
Sbjct: 47 LLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVI 106
Query: 363 EQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASH 422
E + + WT++IRGY +G F +E ++ M E + P + + S++L ACG +
Sbjct: 107 EPVQFRNPFLWTAVIRGYAIEGKF-DEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDL 165
Query: 423 KHGREIHGYLLR-NGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFG 481
GR+ H R G F + V N +IDMYVK +I CA VF EM E+D ISW+ +I
Sbjct: 166 NLGRQFHAQTFRLRGFCF-VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAA 224
Query: 482 CSLHGQGKLGVDLFRQL 498
+ G + +LF L
Sbjct: 225 YARVGNMECAAELFESL 241
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 295 bits (756), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 172/514 (33%), Positives = 277/514 (53%), Gaps = 15/514 (2%)
Query: 271 TSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYL 330
+MIR + E LFR + S+ + + S L C G L G +IHG +
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRRNS-SLPANPLSSSFALKCCIKSGDLLGGLQIHGKI 139
Query: 331 VRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEV 390
+G D LL TL+ +Y+ C S DA VF+++P + VSW + Y++ +V
Sbjct: 140 FSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKR-TRDV 198
Query: 391 FRLFRKMNSE---GLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAV 447
LF KM ++ +KP V+ L AC + + G+++H ++ NG+ +N+SN +
Sbjct: 199 LVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTL 258
Query: 448 IDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLD 507
+ MY + G++ A VF M E++ +SW+ +I G +++G GK ++ F ++ + +P +
Sbjct: 259 VSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISP-E 317
Query: 508 DNIYAAALHACSTARMFEEGRVCFNHIRG------PMIAHCAQKVSLLARCGLFDEAMVF 561
+ L ACS + + EG + F+ +R P + H V LL R L D+A
Sbjct: 318 EQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSL 377
Query: 562 IREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKL 621
I+ +++ + R LL CR+HG+ LG++VI L EL+ A +YVLLLN ++ GK
Sbjct: 378 IKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKW 437
Query: 622 DMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTE 681
+ V ++R ++E+ + K C+ + VH F DVSHPRK+EI L ++++
Sbjct: 438 EKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIA 497
Query: 682 GVEPKWDFSLHDV--DEERECTQIEHSELLALAFGLISSQAG-PIRLEKNSRVCRGCHDF 738
G + LH++ +EE+ HSE LA+AFG++ + G IR+ KN R C CH+F
Sbjct: 498 GYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNF 557
Query: 739 AKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
AKFVS V R +I++D + FHHFK G C+C DFW
Sbjct: 558 AKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 94/214 (43%), Gaps = 5/214 (2%)
Query: 113 AADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFL 172
+ D G Q+H S + + L+ LY++ ++ A +FD+ + W L
Sbjct: 126 SGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVL 185
Query: 173 AKLYVLEGMPRSALELFHRM---VXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVK 229
Y+ R L LF +M V +G+L G+ VH +
Sbjct: 186 FSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDE 245
Query: 230 LGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMEL 289
GL G + SN+L+ MY CGSM A VF M ++VVSWT++I G NG EA+E
Sbjct: 246 NGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEA 305
Query: 290 FRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHG 323
F M G+S P+ ++ +L C G + G
Sbjct: 306 FNEMLKFGIS--PEEQTLTGLLSACSHSGLVAEG 337
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 295 bits (755), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 176/510 (34%), Positives = 271/510 (53%), Gaps = 45/510 (8%)
Query: 214 MGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSM 273
+ + +G VH + K +V+ ++L+ MY CG++ DA+ VF++M ++VVSW S+
Sbjct: 165 LNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSL 224
Query: 274 IRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN 333
I QNG EA+++F+ M LE V+PD V +++V+ C + ++K G+E+HG +V+N
Sbjct: 225 ITCFEQNGPAVEALDVFQMM-LES-RVEPDEVTLASVISACASLSAIKVGQEVHGRVVKN 282
Query: 334 G-VECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYV----------- 381
+ D++LSN + MYA C ++AR +F+ MP + V++ TSMI GY
Sbjct: 283 DKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLM 342
Query: 382 -------------------KKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASH 422
+ G N E LF + E + PT S ++IL AC +A
Sbjct: 343 FTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAEL 402
Query: 423 KHGREIHGYLLRNGVEF------DINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWS 476
G + H ++L++G +F DI V N++IDMYVK G + VF +M E+D +SW+
Sbjct: 403 HLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWN 462
Query: 477 MMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR- 535
MI G + +G G ++LFR++ + E P D L AC A EEGR F+ +
Sbjct: 463 AMIIGFAQNGYGNEALELFREMLESGEKP-DHITMIGVLSACGHAGFVEEGRHYFSSMTR 521
Query: 536 ----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGK 591
P+ H V LL R G +EA I E ++ + LL C++H LGK
Sbjct: 522 DFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGK 581
Query: 592 QVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKV 651
V E+L E+EP N+ YVLL N +A GK + V +R+++R+ G+ + C+W +
Sbjct: 582 YVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHD 641
Query: 652 HVFGTGDVSHPRKKEICSALQGFMEEMRTE 681
HVF D SHPRKK+I S L + EMR E
Sbjct: 642 HVFMVKDKSHPRKKQIHSLLDILIAEMRPE 671
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 125/502 (24%), Positives = 216/502 (43%), Gaps = 48/502 (9%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAAD 115
+F PE D WN+++ ++ A+ F M + A D
Sbjct: 108 LFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLND 167
Query: 116 FSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKL 175
+ G Q+H+ K S + AL+ +Y+ ++ AQ +FD+ W L
Sbjct: 168 MNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITC 227
Query: 176 YVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLG-LEG 234
+ G AL++F M+ + +++ G++VH VK L
Sbjct: 228 FEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRN 287
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPC------------------------------ 264
++ SN+ + MY C +++AR +F+ MP
Sbjct: 288 DIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMA 347
Query: 265 -KDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHG 323
++VVSW ++I G QNGE EA+ LF + E SV P + +L C + L G
Sbjct: 348 ERNVVSWNALIAGYTQNGENEEALSLFCLLKRE--SVCPTHYSFANILKACADLAELHLG 405
Query: 324 REI------HGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMI 377
+ HG+ ++G E D+ + N+L+ MY CG + LVF +M + VSW +MI
Sbjct: 406 MQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMI 465
Query: 378 RGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRN-G 436
G+ + G+ NE LFR+M G KP +++ +L ACG + GR + R+ G
Sbjct: 466 IGFAQN-GYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFG 524
Query: 437 VEFDINVSNAVIDMYVKSGAIACALNVFGEMN-EKDTISWSMMIFGCSLHGQ---GKLGV 492
V + ++D+ ++G + A ++ EM + D++ W ++ C +H GK
Sbjct: 525 VAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVA 584
Query: 493 DLFRQLERNSEAP--LDDNIYA 512
+ ++E ++ P L N+YA
Sbjct: 585 EKLLEVEPSNSGPYVLLSNMYA 606
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 174/360 (48%), Gaps = 63/360 (17%)
Query: 221 RDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQN 280
R VH +K G E+F N L+ Y CGS+ D R VF+KMP +++ +W S++ G +
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 281 GELSEAMELFRRMN----------LEGLSV---------------KPDLVM----VSTVL 311
G L EA LFR M + G + K V+ ++VL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 312 PVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVV 371
C + + G ++H + ++ DV + + L+ MY+ CG DA+ VF++M + VV
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 372 SWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGY 431
SW S+I + ++ G E +F+ M ++P V+++S++ AC +++ K G+E+HG
Sbjct: 220 SWNSLITCF-EQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGR 278
Query: 432 LLRNG-VEFDINVSNAVIDMYVK-------------------------------SGAIAC 459
+++N + DI +SNA +DMY K + +
Sbjct: 279 VVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKA 338
Query: 460 ALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACS 519
A +F +M E++ +SW+ +I G + +G+ + + LF L+R S P + +A L AC+
Sbjct: 339 ARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYS-FANILKACA 397
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 126/272 (46%), Gaps = 40/272 (14%)
Query: 324 REIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKK 383
R +H ++++G ++ + N L+ Y+ CG+ D R VF++MP + + +W S++ G + K
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTG-LTK 98
Query: 384 GGFNNEVFRLFRKM-------------------------------NSEGLKPTAVSISSI 412
GF +E LFR M + EG S +S+
Sbjct: 99 LGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASV 158
Query: 413 LPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDT 472
L AC + G ++H + ++ D+ + +A++DMY K G + A VF EM +++
Sbjct: 159 LSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNV 218
Query: 473 ISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFE-----EG 527
+SW+ +I +G +D+F+ + + P D+ A+ + AC++ + G
Sbjct: 219 VSWNSLITCFEQNGPAVEALDVFQMMLESRVEP-DEVTLASVISACASLSAIKVGQEVHG 277
Query: 528 RVCFN-HIRGPMIAHCAQKVSLLARCGLFDEA 558
RV N +R +I A V + A+C EA
Sbjct: 278 RVVKNDKLRNDIILSNA-FVDMYAKCSRIKEA 308
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 292 bits (747), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 179/564 (31%), Positives = 277/564 (49%), Gaps = 54/564 (9%)
Query: 220 GRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCK----DVVSWTSMIR 275
GR +H +K ++ + F SL+ MY G ++ A VFE+ P + ++ W +I
Sbjct: 145 GRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLIN 204
Query: 276 GCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGV 335
G + ++ A LFR M P+ RN
Sbjct: 205 GYCRAKDMHMATTLFRSM--------PE----------------------------RNSG 228
Query: 336 ECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFR 395
+TL+K Y D G A+ +FE MP K VVSWT++I G+ + G + + F
Sbjct: 229 SW-----STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYF- 282
Query: 396 KMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSG 455
+M +GLKP +I+++L AC + + G IHGY+L NG++ D + A++DMY K G
Sbjct: 283 EMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCG 342
Query: 456 AIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAAL 515
+ CA VF MN KD +SW+ MI G ++HG+ + FRQ+ + E P D+ ++ A L
Sbjct: 343 ELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKP-DEVVFLAVL 401
Query: 516 HACSTARMFEEGRVCFNHIR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQH 570
AC + + G F+ +R P + H V LL R G +EA + I
Sbjct: 402 TACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPD 461
Query: 571 PEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRET 630
L C+ H Y + V + L EL+P +Y+ L HA KG + V+K R +
Sbjct: 462 LTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLS 521
Query: 631 IRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFS 690
+++R + ++ +++ F GD SH +EI L + +G P D+S
Sbjct: 522 LQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWS 581
Query: 691 LHDV-DEERECTQIEHSELLALAFGLISSQAG-PIRLEKNSRVCRGCHDFAKFVSKVTGR 748
+HD+ +EE+E HSE LAL G + + G IR+ KN R+C CH K+VSK++ R
Sbjct: 582 IHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQR 641
Query: 749 EIILKDPNFFHHFKHGHCTCEDFW 772
+I+L+D FHHFK G C+C D+W
Sbjct: 642 DILLRDARQFHHFKDGRCSCGDYW 665
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 101/254 (39%), Gaps = 14/254 (5%)
Query: 140 ALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXX 199
LI Y ++ A+ LF+ WT L + G +A+ + M+
Sbjct: 232 TLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKP 291
Query: 200 XXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVF 259
G+L G +H + G++ + +L+ MY CG + A VF
Sbjct: 292 NEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVF 351
Query: 260 EKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGS 319
M KD++SWT+MI+G +G +A++ FR+M G KPD V+ VL C
Sbjct: 352 SNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSG--EKPDEVVFLAVLTAC----- 404
Query: 320 LKHGREIHGYLVRNGVECDVLLSNTL------LKMYADCGASRDARLVFEQMP-SKTVVS 372
L G + + D + TL + + G +A + E MP + + +
Sbjct: 405 LNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTT 464
Query: 373 WTSMIRGYVKKGGF 386
W ++ R G+
Sbjct: 465 WAALYRACKAHKGY 478
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 291 bits (746), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 177/570 (31%), Positives = 292/570 (51%), Gaps = 46/570 (8%)
Query: 242 LLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVK 301
L + Y G +R + +F + D+ +T+ I NG +A L+ + L +
Sbjct: 70 LHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLY--VQLLSSEIN 127
Query: 302 PDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLV 361
P+ S++L C S K G+ IH ++++ G+ D ++ L+ +YA G A+ V
Sbjct: 128 PNEFTFSSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKV 183
Query: 362 FEQMPSKT-------------------------------VVSWTSMIRGYVKKGGFNNEV 390
F++MP ++ +VSW MI GY + GF N+
Sbjct: 184 FDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQH-GFPNDA 242
Query: 391 FRLFRKMNSEG-LKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVID 449
LF+K+ +EG KP +++ + L AC +I + + GR IH ++ + + ++ V +ID
Sbjct: 243 LMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLID 302
Query: 450 MYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDN 509
MY K G++ A+ VF + KD ++W+ MI G ++HG + + LF +++ + D
Sbjct: 303 MYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDI 362
Query: 510 IYAAALHACSTARMFEEGRVCFNHIR-----GPMIAHCAQKVSLLARCGLFDEAMVFIRE 564
+ L AC+ A + EG F + P I H VSLL R G A I+
Sbjct: 363 TFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKN 422
Query: 565 QKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMV 624
++ + +L C++HG++ LGK++ E L L N+ YVLL N +A G + V
Sbjct: 423 MNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGV 482
Query: 625 DKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVE 684
K+R ++E+G+ + + KVH F GD H + KEI + L+ E +++ G
Sbjct: 483 AKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYV 542
Query: 685 PKWDFSLHDVDE-ERECTQIEHSELLALAFGLISSQAG-PIRLEKNSRVCRGCHDFAKFV 742
P + L D++E E+E + HSE LA+A+GLIS++ G P+++ KN RVC CH K +
Sbjct: 543 PNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLI 602
Query: 743 SKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
SK+TGR+I+++D N FHHF G C+C DFW
Sbjct: 603 SKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 96/241 (39%), Gaps = 35/241 (14%)
Query: 119 GKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKT----------------- 161
GK +HTH +K L + L+ +YA D+ AQ +FD+
Sbjct: 145 GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAK 204
Query: 162 --------APFGSDC------WTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXX 207
A F S C W + Y G P AL LF +++
Sbjct: 205 QGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVA 264
Query: 208 XXXX-XMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKD 266
+G+L GR +H+ + V L+ MY CGS+ +A LVF P KD
Sbjct: 265 ALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKD 324
Query: 267 VVSWTSMIRGCVQNGELSEAMELFRRMNLEGLS-VKPDLVMVSTVLPVCGMIGSLKHGRE 325
+V+W +MI G +G +A+ LF M +G++ ++P + L C G + G
Sbjct: 325 IVAWNAMIAGYAMHGYSQDALRLFNEM--QGITGLQPTDITFIGTLQACAHAGLVNEGIR 382
Query: 326 I 326
I
Sbjct: 383 I 383
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 291 bits (746), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 183/599 (30%), Positives = 293/599 (48%), Gaps = 46/599 (7%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIR 275
+L + +H VKLG+ +N+L+ +Y CG+ A VF++MP +D ++W S++
Sbjct: 18 TLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLT 77
Query: 276 GCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGV 335
Q LS ++PD + S ++ C +GS+ HGR++H + + +
Sbjct: 78 ALNQ-ANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEY 136
Query: 336 ECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKG----------- 384
D ++ ++L+ MYA CG A+ VF+ + K +SWT+M+ GY K G
Sbjct: 137 ANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRI 196
Query: 385 -------------------GFNNEVFRLFRKMNSEG---LKPTAVSISSILPACGRIASH 422
G E F +F +M E L P + +SSI+ AC +A+
Sbjct: 197 LPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDP--LVLSSIVGACANLAAS 254
Query: 423 KHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGC 482
GR++HG ++ G + + +SNA+IDMY K + A ++F M +D +SW+ +I G
Sbjct: 255 IAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGM 314
Query: 483 SLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG-----P 537
+ HGQ + + L+ + + P ++ + ++ACS E+GR F + P
Sbjct: 315 AQHGQAEKALALYDDMVSHGVKP-NEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRP 373
Query: 538 MIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQL 597
+ H + LL R GL DEA I LL C+ G +G ++ + L
Sbjct: 374 SLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHL 433
Query: 598 CELEPL-NAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGT 656
L + Y+LL N +A V + R + E ++ + R++ VF
Sbjct: 434 VSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYA 493
Query: 657 GDVSHPRKKEICSALQGFMEEMRT-EGVEPKWDFSLHDVDE-ERECTQIEHSELLALAFG 714
G+ SHP K++I L+ EEMR G P + LHD+DE E+E HSE A+A+G
Sbjct: 494 GETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYG 553
Query: 715 LISSQAG-PIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
L+ + G PIR+ KN RVC CH K +S++T REII++D +HHFK G C+C DFW
Sbjct: 554 LLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 164/339 (48%), Gaps = 39/339 (11%)
Query: 214 MGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSM 273
+GS+ GR VH + + +SL+ MY CG + A+ VF+ + K+ +SWT+M
Sbjct: 118 LGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAM 177
Query: 274 IRGCVQNGELSEAMELFRRM--------------------NLEGLSVKP----------D 303
+ G ++G EA+ELFR + LE SV D
Sbjct: 178 VSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILD 237
Query: 304 LVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFE 363
+++S+++ C + + GR++HG ++ G + V +SN L+ MYA C A+ +F
Sbjct: 238 PLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFS 297
Query: 364 QMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHK 423
+M + VVSWTS+I G + G + L+ M S G+KP V+ ++ AC + +
Sbjct: 298 RMRHRDVVSWTSLIVGMAQHGQ-AEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVE 356
Query: 424 HGREIHGYLLRN-GVEFDINVSNAVIDMYVKSGAIACALNVFGEMN-EKDTISWSMMIFG 481
GRE+ + ++ G+ + ++D+ +SG + A N+ M D +W+ ++
Sbjct: 357 KGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSA 416
Query: 482 CSLHGQGKLGVDLFR------QLERNSEAPLDDNIYAAA 514
C G+G++G+ + +L+ S L NIYA+A
Sbjct: 417 CKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASA 455
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 101/188 (53%)
Query: 311 LPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTV 370
L +C +L + +H ++V+ G+ L+NTL+ +Y CGA+ A VF++MP +
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 371 VSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHG 430
++W S++ + + +S GL+P S+++ AC + S HGR++H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 431 YLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKL 490
+ + + D V ++++DMY K G + A VF + K+TISW+ M+ G + G+ +
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 491 GVDLFRQL 498
++LFR L
Sbjct: 190 ALELFRIL 197
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 86/231 (37%), Gaps = 5/231 (2%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXAS--RL 112
++F P + +W LI + + A S FT+M R V + L
Sbjct: 192 ELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANL 251
Query: 113 AADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFL 172
AA + G+Q+H + L S ALI +YA D+ A+ +F + WT L
Sbjct: 252 AASIA-GRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSL 310
Query: 173 AKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVK-LG 231
G AL L+ MV +G + +GR++ K G
Sbjct: 311 IVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYG 370
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPC-KDVVSWTSMIRGCVQNG 281
+ + LL + G + +A + MP D +W +++ C + G
Sbjct: 371 IRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQG 421
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 413 LPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDT 472
L C R + + +H ++++ G+ ++N ++++Y K GA + AL VF EM +D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 473 ISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPL--DDNIYAAALHACSTARMFEEGRVC 530
I+W+ ++ +L+ G L S + L DD +++A + AC+ + GR
Sbjct: 70 IAWASVL--TALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQV 127
Query: 531 FNHIRGPMIAH----CAQKVSLLARCGLFDEA 558
H A+ + V + A+CGL + A
Sbjct: 128 HCHFIVSEYANDEVVKSSLVDMYAKCGLLNSA 159
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 194/693 (27%), Positives = 317/693 (45%), Gaps = 38/693 (5%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
++F +P +T++WN LI + + A + F +M +
Sbjct: 79 EKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSL 138
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSD-CWTFL 172
G+Q+H H +K + + L+ +YA I+ A+ LF+ ++ WT +
Sbjct: 139 VLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSM 198
Query: 173 AKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL 232
Y G A+E F + + + R G VH VK G
Sbjct: 199 LTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGF 258
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
+ ++ ++L+ MY C M AR + E M DVVSW SMI GCV+ G + EA+ +F R
Sbjct: 259 KTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGR 318
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGS-LKHGREIHGYLVRNGVECDVLLSNTLLKMYAD 351
M+ + K D + ++L + + +K H +V+ G L++N L+ MYA
Sbjct: 319 MHERDM--KIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAK 376
Query: 352 CGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISS 411
G A VFE M K V+SWT+++ G G ++ E +LF M G+ P + +S
Sbjct: 377 RGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYD-EALKLFCNMRVGGITPDKIVTAS 435
Query: 412 ILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKD 471
+L A + + G+++HG +++G ++V+N+++ MY K G++ A +F M +D
Sbjct: 436 VLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRD 495
Query: 472 TISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCF 531
I+W+ +I G + +G L+D R F+ R +
Sbjct: 496 LITWTCLIVGYAKNGL------------------LED-----------AQRYFDSMRTVY 526
Query: 532 NHIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGK 591
GP H A + L R G F + + + ++E V + +L R HG G+
Sbjct: 527 GITPGP--EHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGE 584
Query: 592 QVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKV 651
+ + L ELEP NA YV L N ++ G+ D +R ++ R + + C+W + KV
Sbjct: 585 RAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKV 644
Query: 652 HVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEE-RECTQIEHSELLA 710
H F + D HPR EI S + M ++ G F+LHD+D+E +E HSE LA
Sbjct: 645 HSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLA 704
Query: 711 LAFGLISSQAG-PIRLEKNSRVCRGCHDFAKFV 742
+AFGL+ +G PIR+ KN RVC CH K +
Sbjct: 705 VAFGLLVVPSGAPIRIIKNLRVCGDCHSAMKLL 737
Score = 152 bits (385), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 154/292 (52%), Gaps = 7/292 (2%)
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
E + F N+++ Y + + DA +F P K+ +SW ++I G ++G EA LF
Sbjct: 56 ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWE 115
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADC 352
M +G +KP+ + +VL +C + L G +IHG+ ++ G + DV + N LL MYA C
Sbjct: 116 MQSDG--IKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQC 173
Query: 353 GASRDARLVFEQMPS-KTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISS 411
+A +FE M K V+WTSM+ GY + GF + FR + EG + + S
Sbjct: 174 KRISEAEYLFETMEGEKNNVTWTSMLTGY-SQNGFAFKAIECFRDLRREGNQSNQYTFPS 232
Query: 412 ILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKD 471
+L AC +++ + G ++H ++++G + +I V +A+IDMY K + A + M D
Sbjct: 233 VLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDD 292
Query: 472 TISWSMMIFGCSLHGQGKLGVDLF-RQLERNSEAPLDDNIYAAALHACSTAR 522
+SW+ MI GC G + +F R ER+ + +DD + L+ + +R
Sbjct: 293 VVSWNSMIVGCVRQGLIGEALSMFGRMHERDMK--IDDFTIPSILNCFALSR 342
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 164/559 (29%), Positives = 285/559 (50%), Gaps = 16/559 (2%)
Query: 224 HLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGEL 283
HLI G + L+ + ++ L+F +P D + S+I+ +
Sbjct: 31 HLIVTGYGRSRSLL--TKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLP 88
Query: 284 SEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSN 343
+ +RRM +V P ++V+ C + +L+ G+ +H + V +G D +
Sbjct: 89 LHCVAYYRRM--LSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQA 146
Query: 344 TLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLK 403
L+ Y+ CG AR VF++MP K++V+W S++ G+ ++ G +E ++F +M G +
Sbjct: 147 ALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGF-EQNGLADEAIQVFYQMRESGFE 205
Query: 404 PTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNV 463
P + + S+L AC + + G +H Y++ G++ ++ + A+I++Y + G + A V
Sbjct: 206 PDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREV 265
Query: 464 FGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNI-YAAALHACSTAR 522
F +M E + +W+ MI HG G+ V+LF ++E + P+ +N+ + A L AC+ A
Sbjct: 266 FDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDC-GPIPNNVTFVAVLSACAHAG 324
Query: 523 MFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIE---QHPEVL 574
+ EEGR + + P + H V +L R G DEA FI + P +
Sbjct: 325 LVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALW 384
Query: 575 RKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRER 634
+L C++H Y LG ++ ++L LEP N ++V+L N +A GK D V IR+ +
Sbjct: 385 TAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRN 444
Query: 635 GLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDV 694
L+ + + K ++F GD SH EI L+ + + G P + +H V
Sbjct: 445 NLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQV 504
Query: 695 -DEERECTQIEHSELLALAFGLISSQAGPIRLEKNSRVCRGCHDFAKFVSKVTGREIILK 753
+EE+E HSE LA+AFGL+ + I + KN R+C CH K++S V+ R+I ++
Sbjct: 505 EEEEKEFALRYHSEKLAVAFGLLKTVDVAITIVKNLRICEDCHSAFKYISIVSNRQITVR 564
Query: 754 DPNFFHHFKHGHCTCEDFW 772
D FHHF++G C+C D+W
Sbjct: 565 DKLRFHHFQNGSCSCLDYW 583
Score = 159 bits (402), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 177/390 (45%), Gaps = 19/390 (4%)
Query: 120 KQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSD-CWTFLAKLYVL 178
+Q+H H + L LI L S IA LF + P D + + K
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLF-LSVPLPDDFLFNSVIKSTSK 84
Query: 179 EGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFA 238
+P + + RM+ + +LR G+ VH AV G + +
Sbjct: 85 LRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYV 144
Query: 239 SNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGL 298
+L+ Y CG M AR VF++MP K +V+W S++ G QNG EA+++F +M G
Sbjct: 145 QAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGF 204
Query: 299 SVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDA 358
+PD ++L C G++ G +H Y++ G++ +V L L+ +Y+ CG A
Sbjct: 205 --EPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKA 262
Query: 359 RLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSE-GLKPTAVSISSILPACG 417
R VF++M V +WT+MI Y G+ + LF KM + G P V+ ++L AC
Sbjct: 263 REVFDKMKETNVAAWTAMISAY-GTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACA 321
Query: 418 RIASHKHGREIH-----GYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDT 472
+ GR ++ Y L GVE + ++DM ++G + A +++
Sbjct: 322 HAGLVEEGRSVYKRMTKSYRLIPGVEHHV----CMVDMLGRAGFLDEAYKFIHQLDATGK 377
Query: 473 IS----WSMMIFGCSLHGQGKLGVDLFRQL 498
+ W+ M+ C +H LGV++ ++L
Sbjct: 378 ATAPALWTAMLGACKMHRNYDLGVEIAKRL 407
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 126/298 (42%), Gaps = 8/298 (2%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPL-AISTFTQMLRHAVXXXXXXXXXXXXASRL 112
H +F P D +N++I + S PL ++ + +ML V +
Sbjct: 61 HLLFLSVPLPDDFLFNSVIKS-TSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCAD 119
Query: 113 AADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFL 172
+ +GK +H HAV + AL+ Y+ D+ A+ +FD+ W L
Sbjct: 120 LSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSL 179
Query: 173 AKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL 232
+ G+ A+++F++M G++ G VH + GL
Sbjct: 180 VSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGL 239
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
+ V +L+ +Y CG + AR VF+KM +V +WT+MI +G +A+ELF +
Sbjct: 240 DLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNK 299
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN-----GVECDVLLSNTL 345
M + P+ V VL C G ++ GR ++ + ++ GVE V + + L
Sbjct: 300 ME-DDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDML 356
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 286 bits (731), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 197/705 (27%), Positives = 324/705 (45%), Gaps = 53/705 (7%)
Query: 116 FSLGKQLHTHAVKLALSSRAHTLIALIHLY-----ASLDDIAVAQTLFDKTAPFGSDCWT 170
FSLG Q+H VK + +L+ LY +S DD+ LFD+ W
Sbjct: 197 FSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVL---KLFDEIPQRDVASWN 253
Query: 171 FLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGS-LRQGRDVHLIAVK 229
+ V EG A +LF+ M S L +GR++H A++
Sbjct: 254 TVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIR 313
Query: 230 LGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMEL 289
+GL E+ +N+L+ Y M+ ++E M +D V++T MI + G + A+E+
Sbjct: 314 IGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEI 373
Query: 290 FRRMN--------------------LEGLSVKPDLVM---------VSTVLPVCGMIGSL 320
F + L+ L + D++ +++ + CG++
Sbjct: 374 FANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEK 433
Query: 321 KHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK--TVVSWTSMIR 378
K +IHG+ ++ G + + LL M C DA +F+Q PS + + TS+I
Sbjct: 434 KVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIG 493
Query: 379 GYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVE 438
GY + G + V R + + L VS++ IL CG + + G +IH Y L+ G
Sbjct: 494 GYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYF 553
Query: 439 FDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQL 498
DI++ N++I MY K A+ +F M E D ISW+ +I L G + L+ ++
Sbjct: 554 SDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRM 613
Query: 499 ERNSEAP--------LDDNIYAAALHACSTARMFEEGRVCFNHIRGPMIAHCAQKVSLLA 550
P + Y + S +F + ++ P H V +L
Sbjct: 614 NEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYD--IEPTTEHYTAFVRVLG 671
Query: 551 RCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVL 610
GL +EA I ++ VLR LL+ CRIH ++ K+V + + +P Y+L
Sbjct: 672 HWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYIL 731
Query: 611 LLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSA 670
N ++ G + IRE +RERG + A +W ++ K+H F D SHP++K+I
Sbjct: 732 KSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRG 791
Query: 671 LQGFMEEMRTEGVEPKWDFSLHDVDE-ERECTQIEHSELLALAFGLISS--QAGPIRLEK 727
L+ + E G EP ++ L +VDE ++ HS LA+ +G++SS + P+R+ K
Sbjct: 792 LEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMK 851
Query: 728 NSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
N +C CH+F K++S V REI+L+D + FHHF +G C+C D W
Sbjct: 852 NVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 184/388 (47%), Gaps = 48/388 (12%)
Query: 240 NSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLS 299
N+L+ Y+ G R+A LVF + VVS+T++I G + EA+++F RM GL
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGL- 176
Query: 300 VKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMY-ADCGASRDA 358
V+P+ +L C + G +IHG +V++G V +SN+L+ +Y D G+S D
Sbjct: 177 VQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDD 236
Query: 359 RL-VFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNS-EGLKPTAVSISSILPAC 416
L +F+++P + V SW +++ VK+G +++ F LF +MN EG + ++S++L +C
Sbjct: 237 VLKLFDEIPQRDVASWNTVVSSLVKEGK-SHKAFDLFYEMNRVEGFGVDSFTLSTLLSSC 295
Query: 417 GRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVK----------------------- 453
+ GRE+HG +R G+ +++V+NA+I Y K
Sbjct: 296 TDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFT 355
Query: 454 --------SGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQ-LERNSEA 504
G + A+ +F + EK+TI+++ ++ G +G G + LF L+R E
Sbjct: 356 EMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVE- 414
Query: 505 PLDDNIYAAALHACS--TARMFEEGRVCFNHIRGPMIAHCAQK--VSLLARCGLFDEAMV 560
L D +A+ AC + + E F G C Q + + RC +A
Sbjct: 415 -LTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADA-- 471
Query: 561 FIREQKIEQHPEVLRKLLEGCRIHGEYA 588
E+ +Q P L I G YA
Sbjct: 472 ---EEMFDQWPSNLDSSKATTSIIGGYA 496
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 4/191 (2%)
Query: 341 LSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSE 400
L N L+ Y G R+A LVF + S TVVS+T++I G+ + E ++F +M
Sbjct: 116 LGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGF-SRLNLEIEALKVFFRMRKA 174
Query: 401 GL-KPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIAC 459
GL +P + +IL AC R++ G +IHG ++++G + VSN+++ +Y K +C
Sbjct: 175 GLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSC 234
Query: 460 --ALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHA 517
L +F E+ ++D SW+ ++ G+ DLF ++ R +D + L +
Sbjct: 235 DDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSS 294
Query: 518 CSTARMFEEGR 528
C+ + + GR
Sbjct: 295 CTDSSVLLRGR 305
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 112/260 (43%), Gaps = 5/260 (1%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
++F E +T+ +N L+ N H A+ FT ML+ V A L +
Sbjct: 372 EIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVS 431
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDK--TAPFGSDCWTFL 172
+ + +Q+H +K + AL+ + + +A A+ +FD+ + S T +
Sbjct: 432 EKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSI 491
Query: 173 AKLYVLEGMPRSALELFHR-MVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLG 231
Y G+P A+ LFHR + +G G +H A+K G
Sbjct: 492 IGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAG 551
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFR 291
++ NSL+ MY C DA +F M DV+SW S+I + EA+ L+
Sbjct: 552 YFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWS 611
Query: 292 RMNLEGLSVKPDLVMVSTVL 311
RMN + +KPD++ ++ V+
Sbjct: 612 RMNEK--EIKPDIITLTLVI 629
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 285 bits (730), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 169/544 (31%), Positives = 285/544 (52%), Gaps = 10/544 (1%)
Query: 237 FASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLE 296
F + L+ Y+ G A +F++MP +D+VSW S+I G G L + E+ RM +
Sbjct: 67 FIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMIS 126
Query: 297 GLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASR 356
+ +P+ V +++ C GS + GR IHG +++ GV +V + N + Y G
Sbjct: 127 EVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLT 186
Query: 357 DARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPAC 416
+ +FE + K +VSW +MI +++ G + F G +P + ++L +C
Sbjct: 187 SSCKLFEDLSIKNLVSWNTMIVIHLQNG-LAEKGLAYFNMSRRVGHEPDQATFLAVLRSC 245
Query: 417 GRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWS 476
+ + + IHG ++ G + ++ A++D+Y K G + + VF E+ D+++W+
Sbjct: 246 EDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWT 305
Query: 477 MMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR- 535
M+ + HG G+ + F + +P D + L+ACS + + EEG+ F +
Sbjct: 306 AMLAAYATHGFGRDAIKHFELMVHYGISP-DHVTFTHLLNACSHSGLVEEGKHYFETMSK 364
Query: 536 ----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGK 591
P + H + V LL R GL +A I+E +E V LL CR++ + LG
Sbjct: 365 RYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGT 424
Query: 592 QVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKV 651
+ E+L ELEP + NYV+L N ++ G +IR ++++GL C++ + K+
Sbjct: 425 KAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKI 484
Query: 652 HVFGTGDVSHPRKKEICSALQGFMEEMRTE-GVEPKWDFSLHDVDEERECTQI-EHSELL 709
H F GD SHP ++I L+ ++M++E G + K +F LHDV E+ + I +HSE +
Sbjct: 485 HKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKI 544
Query: 710 ALAFG-LISSQAGPIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTC 768
A+AFG L+ S PI + KN R+C CH+ AK +S + R II++D FHHF G C+C
Sbjct: 545 AMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSC 604
Query: 769 EDFW 772
D+W
Sbjct: 605 SDYW 608
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 180/422 (42%), Gaps = 26/422 (6%)
Query: 109 ASRLAADFSLGKQLHTHAVKLALSSRAHTLIA--LIHLYASLDDIAVAQTLFDKTAPFGS 166
A + L + LH VK ++S R H I L+ Y L A+ LFD+
Sbjct: 40 AVKSCVSIELCRLLHCKVVK-SVSYR-HGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDL 97
Query: 167 DCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMM--GSLRQGRDVH 224
W L Y G E+ RM+ + GS +GR +H
Sbjct: 98 VSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIH 157
Query: 225 LIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELS 284
+ +K G+ EV N+ + Y G + + +FE + K++VSW +MI +QNG
Sbjct: 158 GLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAE 217
Query: 285 EAMELF---RRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLL 341
+ + F RR+ E PD VL C +G ++ + IHG ++ G + +
Sbjct: 218 KGLAYFNMSRRVGHE-----PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCI 272
Query: 342 SNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEG 401
+ LL +Y+ G D+ VF ++ S ++WT+M+ Y GF + + F M G
Sbjct: 273 TTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATH-GFGRDAIKHFELMVHYG 331
Query: 402 LKPTAVSISSILPAC---GRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIA 458
+ P V+ + +L AC G + KH E R ++ ++ + ++D+ +SG +
Sbjct: 332 ISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYR--IDPRLDHYSCMVDLLGRSGLLQ 389
Query: 459 CALNVFGEMN-EKDTISWSMMIFGCSLHGQGKLGVD----LFRQLERNS-EAPLDDNIYA 512
A + EM E + W ++ C ++ +LG LF R+ + NIY+
Sbjct: 390 DAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYS 449
Query: 513 AA 514
A+
Sbjct: 450 AS 451
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 114/232 (49%), Gaps = 3/232 (1%)
Query: 289 LFRRMNLEGLSVKPDL-VMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLK 347
L+RR L S L VS+++ S++ R +H +V++ + + L+
Sbjct: 15 LYRRRFLSQSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVG 74
Query: 348 MYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSE-GLKPTA 406
Y G A +F++MP + +VSW S+I GY +G L R M SE G +P
Sbjct: 75 CYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNE 134
Query: 407 VSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGE 466
V+ S++ AC S + GR IHG +++ GV ++ V NA I+ Y K+G + + +F +
Sbjct: 135 VTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFED 194
Query: 467 MNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHAC 518
++ K+ +SW+ MI +G + G+ F R P D + A L +C
Sbjct: 195 LSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEP-DQATFLAVLRSC 245
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 127/315 (40%), Gaps = 5/315 (1%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
++FD+ PE D ++WN+LI + + ++M+ V S
Sbjct: 87 KLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVY 146
Query: 115 DFSL--GKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFL 172
S G+ +H +K + + A I+ Y D+ + LF+ + W +
Sbjct: 147 GGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTM 206
Query: 173 AKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL 232
+++ G+ L F+ MG +R + +H + + G
Sbjct: 207 IVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGF 266
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
G + +LL +Y G + D+ VF ++ D ++WT+M+ +G +A++ F
Sbjct: 267 SGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFEL 326
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLV-RNGVECDVLLSNTLLKMYAD 351
M G+S PD V + +L C G ++ G+ + R ++ + + ++ +
Sbjct: 327 MVHYGIS--PDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGR 384
Query: 352 CGASRDARLVFEQMP 366
G +DA + ++MP
Sbjct: 385 SGLLQDAYGLIKEMP 399
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 182/624 (29%), Positives = 305/624 (48%), Gaps = 16/624 (2%)
Query: 64 DTLAWNTLIHTHLSNNHFPLAISTFTQMLRHA--VXXXXXXXXXXXXASRLAADFSLGKQ 121
D WN+L+ + N+ F + F ++L + V L +F LG+
Sbjct: 70 DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREF-LGRM 128
Query: 122 LHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGM 181
+HT VK +L+ +YA + + +FD+ W + + G
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 182 PRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNS 241
ALELF RM + L +G+++H VK G E + + +++
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSA 248
Query: 242 LLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVK 301
L+ MY C + AR VF+KMP K +V+W SMI+G V G+ +E+ RM +EG +
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG--TR 306
Query: 302 PDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLV 361
P ++++L C +L HG+ IHGY++R+ V D+ ++ +L+ +Y CG + A V
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 362 FEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIAS 421
F + SW MI Y+ G + V ++ +M S G+KP V+ +S+LPAC ++A+
Sbjct: 367 FSKTQKDVAESWNVMISSYISVGNWFKAV-EVYDQMVSVGVKPDVVTFTSVLPACSQLAA 425
Query: 422 HKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFG 481
+ G++IH + + +E D + +A++DMY K G A +F + +KD +SW++MI
Sbjct: 426 LEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISA 485
Query: 482 CSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG----- 536
HGQ + + F ++++ P D A L AC A + +EG F+ +R
Sbjct: 486 YGSHGQPREALYQFDEMQKFGLKP-DGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIE 544
Query: 537 PMIAHCAQKVSLLARCGLFDEAMVFIREQ-KIEQHPEVLRKLLEGCRIHGEYALGKQVIE 595
P+I H + + +L R G EA I++ + + E+L L C +H E++LG ++
Sbjct: 545 PIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIAR 604
Query: 596 QLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFG 655
L E P +A Y++L N +A D ++R ++E GL+ K C+W +KV F
Sbjct: 605 LLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFF 664
Query: 656 TGDVSHPRKKEI--CSA-LQGFME 676
D SH R + + C A L G ME
Sbjct: 665 AEDRSHLRAENVYECLALLSGHME 688
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/478 (27%), Positives = 216/478 (45%), Gaps = 10/478 (2%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
QVFD+ PE D +WNT+I + A+ F +M A
Sbjct: 163 QVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLL 222
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
GK++H VK + AL+ +Y D + VA+ +F K W + K
Sbjct: 223 WLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIK 282
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
YV +G +S +E+ +RM+ +L G+ +H ++ +
Sbjct: 283 GYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNA 342
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVV-SWTSMIRGCVQNGELSEAMELFRRM 293
+++ + SL+ +Y CG A VF K KDV SW MI + G +A+E++ +M
Sbjct: 343 DIYVNCSLIDLYFKCGEANLAETVFSKTQ-KDVAESWNVMISSYISVGNWFKAVEVYDQM 401
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCG 353
G VKPD+V ++VLP C + +L+ G++IH + + +E D LL + LL MY+ CG
Sbjct: 402 VSVG--VKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCG 459
Query: 354 ASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSIL 413
++A +F +P K VVSWT MI Y G +++ F +M GLKP V++ ++L
Sbjct: 460 NEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQ-FDEMQKFGLKPDGVTLLAVL 518
Query: 414 PACGRIASHKHGREIHGYLL-RNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDT 472
ACG G + + + G+E I + +ID+ ++G + A + + E
Sbjct: 519 SACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSD 578
Query: 473 IS--WSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGR 528
+ S + C LH + LG + R L N P D + Y + ++ ++ R
Sbjct: 579 NAELLSTLFSACCLHLEHSLGDRIARLLVEN--YPDDASTYMVLFNLYASGESWDAAR 634
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 182/358 (50%), Gaps = 11/358 (3%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCK-DVVSWTSMI 274
SLR+ + VH + LGL +V SL+ +Y C AR VFE + DV W S++
Sbjct: 19 SLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLM 78
Query: 275 RGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNG 334
G +N + +E+F+R+ + V PD V+ G +G GR IH +V++G
Sbjct: 79 SGYSKNSMFHDTLEVFKRLLNCSICV-PDSFTFPNVIKAYGALGREFLGRMIHTLVVKSG 137
Query: 335 VECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLF 394
CDV+++++L+ MYA ++ VF++MP + V SW ++I + + G + LF
Sbjct: 138 YVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE-AEKALELF 196
Query: 395 RKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKS 454
+M S G +P +VS++ + AC R+ + G+EIH ++ G E D V++A++DMY K
Sbjct: 197 GRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKC 256
Query: 455 GAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAA 514
+ A VF +M K ++W+ MI G G K V++ ++ P + +
Sbjct: 257 DCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTL-TSI 315
Query: 515 LHACSTAR-----MFEEGRVCFNHIRGPMIAHCAQKVSLLARCGLFDEA-MVFIREQK 566
L ACS +R F G V + + + +C+ + L +CG + A VF + QK
Sbjct: 316 LMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSL-IDLYFKCGEANLAETVFSKTQK 372
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 281 bits (720), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 178/631 (28%), Positives = 294/631 (46%), Gaps = 17/631 (2%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
Q+FD+ PE + +++N+LI + + A+ F + +
Sbjct: 103 QLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERC 162
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
D LG+ LH V LS + + LI +Y+ + A +LFD+ W L
Sbjct: 163 DLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLIS 222
Query: 175 LYVLEGMPRSALELF---HRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLG 231
YV G L L HR G + +G +H KLG
Sbjct: 223 GYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLG 282
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGEL-----SEA 286
+E ++ +LL MY GS+++A +F MP K+VV++ +MI G +Q E+ SEA
Sbjct: 283 MEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEA 342
Query: 287 MELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLL 346
+LF M GL P S VL C +L++GR+IH + +N + D + + L+
Sbjct: 343 FKLFMDMQRRGLEPSPS--TFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALI 400
Query: 347 KMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTA 406
++YA G++ D F + + SWTSMI +V+ + F LFR++ S ++P
Sbjct: 401 ELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLES-AFDLFRQLFSSHIRPEE 459
Query: 407 VSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGE 466
++S ++ AC A+ G +I GY +++G++ +V + I MY KSG + A VF E
Sbjct: 460 YTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIE 519
Query: 467 MNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEE 526
+ D ++S MI + HG +++F ++ + P + + L AC + +
Sbjct: 520 VQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKP-NQQAFLGVLIACCHGGLVTQ 578
Query: 527 GRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGC 581
G F ++ P H V LL R G +A I + HP R LL C
Sbjct: 579 GLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSC 638
Query: 582 RIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKA 641
R++ + +GK+V E+L ELEP + +YVLL N + G +++RE +R+RG+K + A
Sbjct: 639 RVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPA 698
Query: 642 CTWTLYREKVHVFGTGDVSHPRKKEICSALQ 672
+W + + H F D+SHP + I + L+
Sbjct: 699 LSWIVIGNQTHSFAVADLSHPSSQMIYTMLE 729
Score = 172 bits (437), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 137/530 (25%), Positives = 239/530 (45%), Gaps = 41/530 (7%)
Query: 118 LGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYV 177
LGK H H +K +L+ + L L+++Y ++ A+ LFD+ + L Y
Sbjct: 65 LGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYT 124
Query: 178 LEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVF 237
G A+ELF L G +H + V GL +VF
Sbjct: 125 QMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVF 184
Query: 238 ASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEG 297
N L+ MY CG + A +F++ +D VSW S+I G V+ G E + L +M+ +G
Sbjct: 185 LINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDG 244
Query: 298 LSVKPDLVMVSTVLPVCGMI---GSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGA 354
L++ + +VL C + G ++ G IH Y + G+E D+++ LL MYA G+
Sbjct: 245 LNLTT--YALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGS 302
Query: 355 SRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNN----EVFRLFRKMNSEGLKPTAVSIS 410
++A +F MPSK VV++ +MI G+++ + E F+LF M GL+P+ + S
Sbjct: 303 LKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFS 362
Query: 411 SILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK 470
+L AC + ++GR+IH + +N + D + +A+I++Y G+ + F +++
Sbjct: 363 VVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQ 422
Query: 471 DTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVC 530
D SW+ MI + Q + DLFRQL + P ++ + + AC+ G
Sbjct: 423 DIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRP-EEYTVSLMMSACADFAALSSGE-- 479
Query: 531 FNHIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALG 590
I+G I + G+ +A ++ I + + G L
Sbjct: 480 --QIQGYAI-----------KSGI--DAFTSVKTSSISMYAK-----------SGNMPLA 513
Query: 591 KQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKK 640
QV E++ + Y +++ A G + I E+++ G+KP +
Sbjct: 514 NQV---FIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQ 560
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/340 (32%), Positives = 171/340 (50%), Gaps = 29/340 (8%)
Query: 215 GSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMI 274
GS+ G+ H +K L ++ N+LL MY C + AR +F++MP ++++S+ S+I
Sbjct: 61 GSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLI 120
Query: 275 RGCVQNGELSEAMELF---RRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLV 331
G Q G +AMELF R NL K D + L CG L G +HG +V
Sbjct: 121 SGYTQMGFYEQAMELFLEAREANL-----KLDKFTYAGALGFCGERCDLDLGELLHGLVV 175
Query: 332 RNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVF 391
NG+ V L N L+ MY+ CG A +F++ + VSW S+I GYV+ G E
Sbjct: 176 VNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGA-AEEPL 234
Query: 392 RLFRKMNSEGLKPTAVSISSILPAC------GRIASHKHGREIHGYLLRNGVEFDINVSN 445
L KM+ +GL T ++ S+L AC G I + G IH Y + G+EFDI V
Sbjct: 235 NLLAKMHRDGLNLTTYALGSVLKACCINLNEGFI---EKGMAIHCYTAKLGMEFDIVVRT 291
Query: 446 AVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQ-----GKLGVDLFRQLER 500
A++DMY K+G++ A+ +F M K+ ++++ MI G + LF ++R
Sbjct: 292 ALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQR 351
Query: 501 NSEAPLDDNIYAAALHACSTARMFEEGR-----VCFNHIR 535
P + ++ L ACS A+ E GR +C N+ +
Sbjct: 352 RGLEP-SPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQ 390
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 192/569 (33%), Positives = 286/569 (50%), Gaps = 58/569 (10%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIR 275
SLR G +H A+K GLE +F +L+ MY CG + AR VF++M ++V+W ++I
Sbjct: 121 SLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVIT 180
Query: 276 GCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHG-YLVRNG 334
C FR ++ G REI LVRN
Sbjct: 181 AC------------FRGNDVAG-------------------------AREIFDKMLVRNH 203
Query: 335 VECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLF 394
+V+L+ Y G A+ +F +MP + VSW++MI G G FN E F F
Sbjct: 204 TSWNVMLAG-----YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFN-ESFLYF 257
Query: 395 RKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKS 454
R++ G+ P VS++ +L AC + S + G+ +HG++ + G + ++V+NA+IDMY +
Sbjct: 258 RELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRC 317
Query: 455 GAIACALNVFGEMNEKDTI-SWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAA 513
G + A VF M EK I SW+ MI G ++HGQG+ V LF ++ P D + +
Sbjct: 318 GNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTP-DGISFIS 376
Query: 514 ALHACSTARMFEEGRVCFNHIR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIE 568
LHACS A + EEG F+ ++ P I H V L R G +A FI + I
Sbjct: 377 LLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIP 436
Query: 569 QHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIR 628
V R LL C HG L +QV ++L EL+P N+ + VLL N +A GK V IR
Sbjct: 437 PTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIR 496
Query: 629 ETIRERGLKPKKACTWTLYR--EKVHVFGTGDVSHPRKKEICSALQGFMEEMRTE-GVEP 685
+++ + + KK W+L + ++ F G+ E L+ + ++ E G P
Sbjct: 497 KSMIVQ--RIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTP 554
Query: 686 KWDFSLHDVDEERECTQI-EHSE-LLALAFGLISSQAGPIRLEKNSRVCRGCHDFAKFVS 743
+ +L+DV+EE + Q+ +HSE L S+ IR+ KN R+CR CH K S
Sbjct: 555 EVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTS 614
Query: 744 KVTGREIILKDPNFFHHFKHGHCTCEDFW 772
KV G EI+++D N FH FK G C+C D+W
Sbjct: 615 KVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 119/283 (42%), Gaps = 20/283 (7%)
Query: 319 SLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQ-----MPSKTVVSW 373
+L+ +IHG ++ GV+ D + L+ C S L + + P +
Sbjct: 17 NLRALTQIHGLFIKYGVDTDSYFTGKLI---LHCAISISDALPYARRLLLCFPEPDAFMF 73
Query: 374 TSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLL 433
+++RGY + +N V M + P + S + ++ A S + G ++H L
Sbjct: 74 NTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQAL 133
Query: 434 RNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGV- 492
++G+E + V +I MY G + A VF EM++ + ++W+ +I C G G
Sbjct: 134 KHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITAC-FRGNDVAGAR 192
Query: 493 DLF-RQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRGPMIAHCAQKVSLLAR 551
++F + L RN + + L A E + F+ + + + +A
Sbjct: 193 EIFDKMLVRNHTS------WNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAH 246
Query: 552 CGLFDEAMVFIRE-QKIEQHPE--VLRKLLEGCRIHGEYALGK 591
G F+E+ ++ RE Q+ P L +L C G + GK
Sbjct: 247 NGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGK 289
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 102/266 (38%), Gaps = 7/266 (2%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
++F + P D ++W+T+I N F + F ++ R + A +
Sbjct: 224 RIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSG 283
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDC---WTF 171
F GK LH K S ALI +Y+ ++ +A+ +F+ C WT
Sbjct: 284 SFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQE--KRCIVSWTS 341
Query: 172 LAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKL- 230
+ + G A+ LF+ M G + +G D ++
Sbjct: 342 MIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVY 401
Query: 231 GLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPC-KDVVSWTSMIRGCVQNGELSEAMEL 289
+E E+ ++ +Y G ++ A +MP + W +++ C +G + A ++
Sbjct: 402 HIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQV 461
Query: 290 FRRMNLEGLSVKPDLVMVSTVLPVCG 315
+R+N + DLV++S G
Sbjct: 462 KQRLNELDPNNSGDLVLLSNAYATAG 487
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 280 bits (715), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 170/596 (28%), Positives = 296/596 (49%), Gaps = 47/596 (7%)
Query: 221 RDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRD------ARLVFEKMPCKDVVSWTSMI 274
++V I KL ++G + L+ +V ++ D A + ++ + + SMI
Sbjct: 20 KEVRQIHAKLYVDG-TLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMI 78
Query: 275 RGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNG 334
R ++ ++ + +RR+ G +KPD V+ ++ C + + G ++HG +R G
Sbjct: 79 RAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRG 138
Query: 335 VECDVLLSNTLLKMYAD-------------------------------CGASRDARLVFE 363
+ D + L+ +YA+ CG AR +FE
Sbjct: 139 FDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFE 198
Query: 364 QMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHK 423
MP + ++W +MI GY + G + E +F M EG+K V++ S+L AC ++ +
Sbjct: 199 GMPERDPIAWNAMISGYAQVGE-SREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALD 257
Query: 424 HGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCS 483
GR H Y+ RN ++ + ++ ++D+Y K G + A+ VF M EK+ +WS + G +
Sbjct: 258 QGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLA 317
Query: 484 LHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG-----PM 538
++G G+ ++LF ++++ P + + + L CS +EG+ F+ +R P
Sbjct: 318 MNGFGEKCLELFSLMKQDGVTP-NAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQ 376
Query: 539 IAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLC 598
+ H V L AR G ++A+ I++ ++ H V LL R++ LG +++
Sbjct: 377 LEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKML 436
Query: 599 ELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGD 658
ELE N YVLL N +A D V +R++++ +G++ + C+ +VH F GD
Sbjct: 437 ELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGD 496
Query: 659 VSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVD-EERECTQIEHSELLALAFGLIS 717
SHP+ +I + + +R G + + D+D EE+E HSE A+AFG++S
Sbjct: 497 KSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMS 556
Query: 718 -SQAGPIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
+ PIR+ KN RVC CH + +SK+ REII++D N FHHFK GHC+C FW
Sbjct: 557 LKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 117/293 (39%), Gaps = 37/293 (12%)
Query: 119 GKQLHTHAVKLALSSRAHTLIALIHLYASLD----------------------------- 149
G Q+H ++ + H LI LYA L
Sbjct: 127 GLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACAR 186
Query: 150 --DIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXX 207
D+ A+ LF+ W + Y G R AL +FH M
Sbjct: 187 CGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISV 246
Query: 208 XXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDV 267
+G+L QGR H + ++ V + +L+ +Y CG M A VF M K+V
Sbjct: 247 LSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNV 306
Query: 268 VSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIH 327
+W+S + G NG + +ELF M +G V P+ V +VL C ++G + G+ H
Sbjct: 307 YTWSSALNGLAMNGFGEKCLELFSLMKQDG--VTPNAVTFVSVLRGCSVVGFVDEGQR-H 363
Query: 328 GYLVRN--GVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKT-VVSWTSMI 377
+RN G+E + L+ +YA G DA + +QMP K W+S++
Sbjct: 364 FDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 119/280 (42%), Gaps = 41/280 (14%)
Query: 319 SLKHGREIHGYLVRNGVECDVLLSNTLLKMYA--DCGASRDARLVFEQMPSKTVVSWTSM 376
+ K R+IH L +G D L +K A D A + ++ T+ + SM
Sbjct: 18 TFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSM 77
Query: 377 IRGYVKKGGFNNEVFRLFRKMNSEG--LKPTAVSISSILPACGRIASHKHGREIHGYLLR 434
IR + K + F +R++ S G LKP +++ ++ AC + + G ++HG +R
Sbjct: 78 IRAHCK-SPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIR 136
Query: 435 NGVEFDINVSNAVIDMYVKSG----------AIAC---------------------ALNV 463
G + D +V +I +Y + G +I C A +
Sbjct: 137 RGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKL 196
Query: 464 FGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARM 523
F M E+D I+W+ MI G + G+ + +++F ++ ++ + L AC+
Sbjct: 197 FEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG-VKVNGVAMISVLSACTQLGA 255
Query: 524 FEEGRVCFNHIRGPMIAHCAQ----KVSLLARCGLFDEAM 559
++GR ++I I + V L A+CG ++AM
Sbjct: 256 LDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAM 295
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 80/222 (36%), Gaps = 2/222 (0%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
++F+ PE D +AWN +I + A++ F M V A
Sbjct: 195 KLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLG 254
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
G+ H++ + + L+ LYA D+ A +F W+
Sbjct: 255 ALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALN 314
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQG-RDVHLIAVKLGLE 233
+ G LELF M ++G + +G R + + G+E
Sbjct: 315 GLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIE 374
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKD-VVSWTSMI 274
++ L+ +Y G + DA + ++MP K W+S++
Sbjct: 375 PQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 192/647 (29%), Positives = 321/647 (49%), Gaps = 20/647 (3%)
Query: 141 LIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXX 200
++ YA I +A+ LFD+ + + L Y +A+ LF RM
Sbjct: 80 IVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRM--RKLGFE 137
Query: 201 XXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFE 260
+ + +H +V G + +N+ + Y G +R+A VF
Sbjct: 138 VDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFY 197
Query: 261 KM-PCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGS 319
M +D VSW SMI Q+ E ++A+ L++ M +G + D+ +++VL +
Sbjct: 198 GMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKI--DMFTLASVLNALTSLDH 255
Query: 320 LKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGAS---RDARLVFEQMPSKTVVSWTSM 376
L GR+ HG L++ G + + + L+ Y+ CG D+ VF+++ S +V W +M
Sbjct: 256 LIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTM 315
Query: 377 IRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNG 436
I GY + E + FR+M G +P S + AC ++S ++IHG +++
Sbjct: 316 ISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSH 375
Query: 437 VEFD-INVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLF 495
+ + I+V+NA+I +Y KSG + A VF M E + +S++ MI G + HG G + L+
Sbjct: 376 IPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLY 435
Query: 496 RQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLA 550
+++ + AP + + A L AC+ +EG+ FN ++ P H + + LL
Sbjct: 436 QRMLDSGIAP-NKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLG 494
Query: 551 RCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVL 610
R G +EA FI + LL CR H AL ++ +L ++PL A YV+
Sbjct: 495 RAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVM 554
Query: 611 LLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSA 670
L N +A K + + +R+++R + ++ K C+W ++K HVF D SHP +E+
Sbjct: 555 LANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEY 614
Query: 671 LQGFMEEMRTEG--VEPKWDFSLHDVDEERECTQI--EHSELLALAFGLISSQAG-PIRL 725
L+ M++M+ G ++ KW D E + HSE LA+AFGL+S++ G + +
Sbjct: 615 LEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVV 674
Query: 726 EKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
KN R+C CH+ KF+S V GREII++D FH FK G C+C D+W
Sbjct: 675 VKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/498 (24%), Positives = 206/498 (41%), Gaps = 25/498 (5%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
Q+FD+ P+ DT+++NTLI + A+ F +M + A
Sbjct: 95 QLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRV 154
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSD------C 168
D L KQLH +V S + A + Y+ + A ++F +G D
Sbjct: 155 D--LIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVF-----YGMDELRDEVS 207
Query: 169 WTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAV 228
W + Y AL L+ M+ + L GR H +
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 229 KLGLEGEVFASNSLLKMYVDCG---SMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELS- 284
K G + L+ Y CG M D+ VF+++ D+V W +MI G N ELS
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSE 327
Query: 285 EAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECD-VLLSN 343
EA++ FR+M + + +PD V C + S ++IHG +++ + + + ++N
Sbjct: 328 EAVKSFRQM--QRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNN 385
Query: 344 TLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLK 403
L+ +Y G +DAR VF++MP VS+ MI+GY + G E L+++M G+
Sbjct: 386 ALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQH-GHGTEALLLYQRMLDSGIA 444
Query: 404 PTAVSISSILPACGRIASHKHGREIHGYLLRN-GVEFDINVSNAVIDMYVKSGAIACALN 462
P ++ ++L AC G+E + +E + + +ID+ ++G + A
Sbjct: 445 PNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAER 504
Query: 463 VFGEMNEKD-TISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTA 521
M K +++W+ ++ C H L +L PL Y + + A
Sbjct: 505 FIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELM--VMQPLAATPYVMLANMYADA 562
Query: 522 RMFEEGRVCFNHIRGPMI 539
R +EE +RG I
Sbjct: 563 RKWEEMASVRKSMRGKRI 580
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 190/415 (45%), Gaps = 24/415 (5%)
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
E VF+ N ++K Y + AR +F+++P D VS+ ++I G E AM LF+R
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADC 352
M G V + + C + +K ++H + V G + ++N + Y+
Sbjct: 131 MRKLGFEVD-GFTLSGLIAACCDRVDLIK---QLHCFSVSGGFDSYSSVNNAFVTYYSKG 186
Query: 353 GASRDARLVFEQMPS-KTVVSWTSMIRGYV--KKGGFNNEVFRLFRKMNSEGLKPTAVSI 409
G R+A VF M + VSW SMI Y K+G + L+++M +G K ++
Sbjct: 187 GLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGA---KALALYKEMIFKGFKIDMFTL 243
Query: 410 SSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSG---AIACALNVFGE 466
+S+L A + GR+ HG L++ G + +V + +ID Y K G + + VF E
Sbjct: 244 ASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQE 303
Query: 467 MNEKDTISWSMMIFGCSLHGQ-GKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFE 525
+ D + W+ MI G S++ + + V FRQ++R P DD + ACS
Sbjct: 304 ILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRP-DDCSFVCVTSACSNLSSPS 362
Query: 526 E-----GRVCFNHIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEG 580
+ G +HI I+ +SL + G +A ++ ++ E + +++G
Sbjct: 363 QCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDAR-WVFDRMPELNAVSFNCMIKG 421
Query: 581 CRIHGEYALGKQVIEQLCE--LEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRE 633
HG + +++ + + P N +V +L+ A GK+D + T++E
Sbjct: 422 YAQHGHGTEALLLYQRMLDSGIAP-NKITFVAVLSACAHCGKVDEGQEYFNTMKE 475
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 277 bits (708), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 178/560 (31%), Positives = 288/560 (51%), Gaps = 10/560 (1%)
Query: 219 QGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCV 278
+G +H VK GL +N+L+ Y D+R FE P K +W+S+I
Sbjct: 33 KGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFA 92
Query: 279 QNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECD 338
QN ++E ++M + G +++PD ++ + C ++ GR +H ++ G + D
Sbjct: 93 QNELPWMSLEFLKKM-MAG-NLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDAD 150
Query: 339 VLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMN 398
V + ++L+ MYA CG AR +F++MP + VV+W+ M+ GY + G N E LF++
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGE-NEEALWLFKEAL 209
Query: 399 SEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIA 458
E L S SS++ C + GR+IHG +++ + V ++++ +Y K G
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 459 CALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHAC 518
A VF E+ K+ W+ M+ + H + ++LF++++ + P + + L+AC
Sbjct: 270 GAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKP-NFITFLNVLNAC 328
Query: 519 STARMFEEGRVCFNHIRG----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVL 574
S A + +EGR F+ ++ P H A V +L R G EA+ I I+ V
Sbjct: 329 SHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVW 388
Query: 575 RKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRER 634
LL C +H L +++ EL P+++ ++ L N +A G+ + K R+ +R+R
Sbjct: 389 GALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDR 448
Query: 635 GLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDV 694
G K + +W R KVH F G+ H + KEI L EEM G + L +V
Sbjct: 449 GEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREV 508
Query: 695 D-EERECTQIEHSELLALAFGLISSQAG-PIRLEKNSRVCRGCHDFAKFVSKVTGREIIL 752
D +E+ T HSE LA+AFGLI+ A PIR+ KN RVC CH+ KF+S T R II+
Sbjct: 509 DGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIV 568
Query: 753 KDPNFFHHFKHGHCTCEDFW 772
+D N FH F+ G C+C D+W
Sbjct: 569 RDNNRFHRFEDGKCSCNDYW 588
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 3/261 (1%)
Query: 118 LGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYV 177
+G+ +H ++K + +L+ +YA +I A+ +FD+ W+ + Y
Sbjct: 134 IGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYA 193
Query: 178 LEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVF 237
G AL LF + L GR +H +++K + F
Sbjct: 194 QMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSF 253
Query: 238 ASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEG 297
+SL+ +Y CG A VF ++P K++ W +M++ Q+ + +ELF+RM L G
Sbjct: 254 VGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSG 313
Query: 298 LSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRD 357
+ KP+ + VL C G + GR + + +E +L+ M G ++
Sbjct: 314 M--KPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQE 371
Query: 358 ARLVFEQMP-SKTVVSWTSMI 377
A V MP T W +++
Sbjct: 372 ALEVITNMPIDPTESVWGALL 392
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 276 bits (705), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 183/666 (27%), Positives = 311/666 (46%), Gaps = 17/666 (2%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAIST---FTQMLRHAVXXXXXXXXXXXXAS 110
H +F+ D ++WN+LI + N + + F +M + A
Sbjct: 69 HSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAE 128
Query: 111 RLAADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWT 170
++G+Q H VK++ + +L+ +Y + +F + W+
Sbjct: 129 SSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWS 188
Query: 171 FLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQG--RDVHLIAV 228
+ Y G A+++F+ + + ++ G R +H I +
Sbjct: 189 TMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITI 248
Query: 229 KLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAME 288
K GL G V SN+L+ MY C S+ +A +F+ ++ ++W++M+ G QNGE EA++
Sbjct: 249 KNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVK 308
Query: 289 LFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKM 348
LF RM G +KP + VL C I L+ G+++H +L++ G E + + L+ M
Sbjct: 309 LFSRMFSAG--IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDM 366
Query: 349 YADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVS 408
YA G DAR F+ + + V WTS+I GYV+ N E L+R+M + G+ P +
Sbjct: 367 YAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSD-NEEALILYRRMKTAGIIPNDPT 425
Query: 409 ISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMN 468
++S+L AC +A+ + G+++HG+ +++G ++ + +A+ MY K G++ VF
Sbjct: 426 MASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTP 485
Query: 469 EKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGR 528
KD +SW+ MI G S +GQG ++LF ++ P DD + + ACS E G
Sbjct: 486 NKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEP-DDVTFVNIISACSHKGFVERGW 544
Query: 529 VCFNHIR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRI 583
FN + P + H A V LL+R G EA FI I+ + R LL C+
Sbjct: 545 FYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKN 604
Query: 584 HGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACT 643
HG+ LG E+L L + YV L + G++ V+++ + +R G+ + C+
Sbjct: 605 HGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCS 664
Query: 644 WTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEERECTQI 703
W + + HVF GD HP +E + +M EG D S EE E TQ+
Sbjct: 665 WIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVTVLDSSF---VEEEEGTQL 721
Query: 704 EHSELL 709
S ++
Sbjct: 722 STSFII 727
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 157/318 (49%), Gaps = 9/318 (2%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIR 275
+L GR VH ++ G + +N L+ Y CG + A +F + CKDVVSW S+I
Sbjct: 29 NLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLIT 88
Query: 276 GCVQNGELSEA---MELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVR 332
G QNG +S + M+LFR M + + P+ ++ + + S GR+ H +V+
Sbjct: 89 GYSQNGGISSSYTVMQLFREMRAQ--DILPNAYTLAGIFKAESSLQSSTVGRQAHALVVK 146
Query: 333 NGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNN--EV 390
D+ + +L+ MY G D VF MP + +W++M+ GY +G +V
Sbjct: 147 MSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKV 206
Query: 391 FRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDM 450
F LF + EG V +++L + GR+IH ++NG+ + +SNA++ M
Sbjct: 207 FNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTM 265
Query: 451 YVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNI 510
Y K ++ A +F ++++I+WS M+ G S +G+ V LF ++ P + I
Sbjct: 266 YSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTI 325
Query: 511 YAAALHACSTARMFEEGR 528
L+ACS EEG+
Sbjct: 326 -VGVLNACSDICYLEEGK 342
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 124/247 (50%), Gaps = 7/247 (2%)
Query: 319 SLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIR 378
+L GR +HG ++R G + +N L+ YA CG A +F + K VVSW S+I
Sbjct: 29 NLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLIT 88
Query: 379 GYVKKGGFNNE--VFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNG 436
GY + GG ++ V +LFR+M ++ + P A +++ I A + S GR+ H +++
Sbjct: 89 GYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMS 148
Query: 437 VEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFR 496
DI V +++ MY K+G + L VF M E++T +WS M+ G + G+ + + +F
Sbjct: 149 SFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFN 208
Query: 497 QLERNSEAPLD-DNIYAAALHACSTARMFEEGRV--CFNHIRGPM--IAHCAQKVSLLAR 551
R E D D ++ A L + + GR C G + +A V++ ++
Sbjct: 209 LFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSK 268
Query: 552 CGLFDEA 558
C +EA
Sbjct: 269 CESLNEA 275
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 275 bits (704), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 181/637 (28%), Positives = 299/637 (46%), Gaps = 13/637 (2%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VF+ E + + WN +I + N + F M +
Sbjct: 383 KVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASH 442
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
D +G Q H+ +K L+ AL+ +YA + A+ +F++ + W +
Sbjct: 443 DLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIG 502
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
YV + A +LF RM + L QG+ VH ++VK GL+
Sbjct: 503 SYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDR 562
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
++ +SL+ MY CG ++DAR VF +P VVS ++I G QN L EA+ LF+ M
Sbjct: 563 DLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEML 621
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECD-VLLSNTLLKMYADCG 353
G V P + +T++ C SL G + HG + + G + L +LL MY +
Sbjct: 622 TRG--VNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSR 679
Query: 354 ASRDARLVFEQMPS-KTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSI 412
+A +F ++ S K++V WT M+ G+ + GF E + +++M +G+ P + ++
Sbjct: 680 GMTEACALFSELSSPKSIVLWTGMMSGH-SQNGFYEEALKFYKEMRHDGVLPDQATFVTV 738
Query: 413 LPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK-D 471
L C ++S + GR IH + + D SN +IDMY K G + + VF EM + +
Sbjct: 739 LRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSN 798
Query: 472 TISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCF 531
+SW+ +I G + +G + + +F + ++ P D+ + L ACS A +GR F
Sbjct: 799 VVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMP-DEITFLGVLTACSHAGKVSDGRKIF 857
Query: 532 NHIRGPM-----IAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGE 586
+ G + H A V LL R G EA FI Q ++ + LL CRIHG+
Sbjct: 858 EMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGD 917
Query: 587 YALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTL 646
G+ E+L ELEP N+ YVLL N +A +G + + +R+ +R+RG+K +W
Sbjct: 918 DIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWID 977
Query: 647 YREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGV 683
++ H+F GD SH +I L+ + M+ + V
Sbjct: 978 VEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDDAV 1014
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 184/384 (47%), Gaps = 9/384 (2%)
Query: 137 TLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXX 196
+ +I+ Y L + A+ LF + + W + + G A+E F M
Sbjct: 263 AFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSS 322
Query: 197 XXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDAR 256
++ +L G VH A+KLGL ++ +SL+ MY C M A
Sbjct: 323 VKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAA 382
Query: 257 LVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGM 316
VFE + K+ V W +MIRG NGE + MELF M G ++ D +++L C
Sbjct: 383 KVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNI--DDFTFTSLLSTCAA 440
Query: 317 IGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSM 376
L+ G + H +++ + ++ + N L+ MYA CGA DAR +FE+M + V+W ++
Sbjct: 441 SHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTI 500
Query: 377 IRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNG 436
I YV+ +E F LF++MN G+ ++S L AC + G+++H ++ G
Sbjct: 501 IGSYVQDEN-ESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCG 559
Query: 437 VEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKL--GVDL 494
++ D++ +++IDMY K G I A VF + E +S + +I G + Q L V L
Sbjct: 560 LDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAG---YSQNNLEEAVVL 616
Query: 495 FRQLERNSEAPLDDNIYAAALHAC 518
F+++ P + +A + AC
Sbjct: 617 FQEMLTRGVNP-SEITFATIVEAC 639
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 196/452 (43%), Gaps = 44/452 (9%)
Query: 111 RLAADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWT 170
RLA +GK +H+ ++ L + S A++ LYA ++ A+ FD W
Sbjct: 71 RLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWN 129
Query: 171 FLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKL 230
+ +Y G P L F + ++ GR +H +K+
Sbjct: 130 SMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKM 189
Query: 231 GLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELF 290
GLE + +L+ MY C + DAR VFE + + V WT + G V+ G EA+ +F
Sbjct: 190 GLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVF 249
Query: 291 RRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYA 350
RM EG +PD + TV+ NT +++
Sbjct: 250 ERMRDEGH--RPDHLAFVTVI-------------------------------NTYIRL-- 274
Query: 351 DCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSIS 410
G +DARL+F +M S VV+W MI G+ K+ G F M +K T ++
Sbjct: 275 --GKLKDARLLFGEMSSPDVVAWNVMISGHGKR-GCETVAIEYFFNMRKSSVKSTRSTLG 331
Query: 411 SILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK 470
S+L A G +A+ G +H ++ G+ +I V ++++ MY K + A VF + EK
Sbjct: 332 SVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEK 391
Query: 471 DTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVC 530
+ + W+ MI G + +G+ ++LF + ++S +DD + + L C+ + E G
Sbjct: 392 NDVFWNAMIRGYAHNGESHKVMELFMDM-KSSGYNIDDFTFTSLLSTCAASHDLEMGSQF 450
Query: 531 FNHIRGPMIAH----CAQKVSLLARCGLFDEA 558
+ I +A V + A+CG ++A
Sbjct: 451 HSIIIKKKLAKNLFVGNALVDMYAKCGALEDA 482
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 141/321 (43%), Gaps = 9/321 (2%)
Query: 319 SLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIR 378
+L+ G+ +H + G++ + L N ++ +YA C A F+ + K V +W SM+
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLS 133
Query: 379 GYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVE 438
Y G +V R F + + P + S +L C R + + GR+IH +++ G+E
Sbjct: 134 MYSSIGK-PGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 439 FDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQL 498
+ A++DMY K I+ A VF + + +T+ W+ + G G + V +F ++
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 499 ERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRGPMIAHCAQKVSLLARCGLFDEA 558
P D + ++ ++ R+ F + P + +S + G A
Sbjct: 253 RDEGHRP-DHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVA 311
Query: 559 MVF---IREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYV--LLLN 613
+ + +R+ ++ L +L I LG V + +L L + YV L++
Sbjct: 312 IEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKL-GLASNIYVGSSLVS 370
Query: 614 WHAGKGKLDMVDKIRETIRER 634
++ K++ K+ E + E+
Sbjct: 371 MYSKCEKMEAAAKVFEALEEK 391
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 275 bits (704), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 180/548 (32%), Positives = 281/548 (51%), Gaps = 20/548 (3%)
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
E + F+ N +L YV + A+ F++MP KD SW +MI G + GE+ +A ELF
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADC 352
M +E V + M+S + CG + H ++ VR V +++ Y
Sbjct: 181 M-MEKNEVSWN-AMISGYIE-CGDLEKASHFFKVAP--VRGVVAWTAMITG-----YMKA 230
Query: 353 GASRDARLVFEQMP-SKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISS 411
A +F+ M +K +V+W +MI GYV+ + +LFR M EG++P + +SS
Sbjct: 231 KKVELAEAMFKDMTVNKNLVTWNAMISGYVENSR-PEDGLKLFRAMLEEGIRPNSSGLSS 289
Query: 412 ILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKD 471
L C +++ + GR+IH + ++ + D+ ++I MY K G + A +F M +KD
Sbjct: 290 ALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKD 349
Query: 472 TISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCF 531
++W+ MI G + HG + LFR++ N P D + A L AC+ A + G F
Sbjct: 350 VVAWNAMISGYAQHGNADKALCLFREMIDNKIRP-DWITFVAVLLACNHAGLVNIGMAYF 408
Query: 532 -----NHIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGE 586
++ P H V LL R G +EA+ IR H V LL CR+H
Sbjct: 409 ESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKN 468
Query: 587 YALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTL 646
L + E+L +L NA YV L N +A K + + V ++R+ ++E + +W
Sbjct: 469 VELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIE 528
Query: 647 YREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEE-RECTQIEH 705
R KVH F + D HP I L+ ++M+ G +P+ +F+LH+V+EE +E + H
Sbjct: 529 IRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWH 588
Query: 706 SELLALAFGLIS-SQAGPIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHG 764
SE LA+AFG I Q I++ KN R+C CH KF+S++ REII++D FHHFK G
Sbjct: 589 SEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDG 648
Query: 765 HCTCEDFW 772
C+C D+W
Sbjct: 649 SCSCGDYW 656
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 145/316 (45%), Gaps = 13/316 (4%)
Query: 154 AQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXM 213
AQ+ FD+ + W + Y G A ELF+ M+
Sbjct: 143 AQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIE---- 198
Query: 214 MGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPC-KDVVSWTS 272
G L + +A G V A +++ Y+ + A +F+ M K++V+W +
Sbjct: 199 CGDLEKASHFFKVAPVRG----VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNA 254
Query: 273 MIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVR 332
MI G V+N + ++LFR M EG ++P+ +S+ L C + +L+ GR+IH + +
Sbjct: 255 MISGYVENSRPEDGLKLFRAMLEEG--IRPNSSGLSSALLGCSELSALQLGRQIHQIVSK 312
Query: 333 NGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFR 392
+ + DV +L+ MY CG DA +FE M K VV+W +MI GY + G ++
Sbjct: 313 STLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGN-ADKALC 371
Query: 393 LFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRN-GVEFDINVSNAVIDMY 451
LFR+M ++P ++ ++L AC G ++R+ VE + ++D+
Sbjct: 372 LFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLL 431
Query: 452 VKSGAIACALNVFGEM 467
++G + AL + M
Sbjct: 432 GRAGKLEEALKLIRSM 447
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 135/338 (39%), Gaps = 27/338 (7%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQM----------------LRHAVX 97
HQ+FD+ PE DT ++N ++ ++ N +F A S F +M R +
Sbjct: 113 HQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEME 172
Query: 98 XXXXXXXXXXXASRLAADFSLGKQLH-------THAVKLALSSRAHTLIALIHLYASLDD 150
+ ++ + + + +H K+A A+I Y
Sbjct: 173 KARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKK 232
Query: 151 IAVAQTLF-DKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXX 209
+ +A+ +F D T W + YV P L+LF M+
Sbjct: 233 VELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALL 292
Query: 210 XXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVS 269
+ +L+ GR +H I K L +V A SL+ MY CG + DA +FE M KDVV+
Sbjct: 293 GCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVA 352
Query: 270 WTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGY 329
W +MI G Q+G +A+ LFR M ++PD + VL C G + G
Sbjct: 353 WNAMISGYAQHGNADKALCLFREMIDN--KIRPDWITFVAVLLACNHAGLVNIGMAYFES 410
Query: 330 LVRN-GVECDVLLSNTLLKMYADCGASRDARLVFEQMP 366
+VR+ VE ++ + G +A + MP
Sbjct: 411 MVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMP 448
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 273 bits (698), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 172/645 (26%), Positives = 300/645 (46%), Gaps = 12/645 (1%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXX--XXXXXASRL 112
++FD+ + D + WN +++ + I F+ M + AS+L
Sbjct: 194 KLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKL 253
Query: 113 AADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFL 172
D LG QLH V + +L+ +Y+ A LF + + W +
Sbjct: 254 LID--LGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCM 311
Query: 173 AKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL 232
YV G+ +L F+ M+ +L + +H ++ +
Sbjct: 312 ISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSI 371
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
++F +++L+ Y C + A+ +F + DVV +T+MI G + NG +++E+FR
Sbjct: 372 SLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRW 431
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADC 352
L + + P+ + + ++LPV G++ +LK GRE+HG++++ G + + ++ MYA C
Sbjct: 432 --LVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKC 489
Query: 353 GASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSI 412
G A +FE++ + +VSW SMI + + +FR+M G+ VSIS+
Sbjct: 490 GRMNLAYEIFERLSKRDIVSWNSMITRCAQSDN-PSAAIDIFRQMGVSGICYDCVSISAA 548
Query: 413 LPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDT 472
L AC + S G+ IHG+++++ + D+ + +IDMY K G + A+NVF M EK+
Sbjct: 549 LSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNI 608
Query: 473 ISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFN 532
+SW+ +I C HG+ K + LF ++ S D + + +C +EG F
Sbjct: 609 VSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFR 668
Query: 533 HIR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEY 587
+ P H A V L R G EA ++ V LL CR+H
Sbjct: 669 SMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNV 728
Query: 588 ALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLY 647
L + +L +L+P N+ YVL+ N HA + + V K+R ++ER ++ +W
Sbjct: 729 ELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEI 788
Query: 648 REKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLH 692
++ H+F +GDV+HP I S L + E+R EG P+ LH
Sbjct: 789 NKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQPYLPLH 833
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 190/389 (48%), Gaps = 5/389 (1%)
Query: 119 GKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDC--WTFLAKLY 176
GKQ+H + ++S ++T ++ +YA + +F + S W + +
Sbjct: 54 GKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSF 113
Query: 177 VLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEV 236
V G+ AL + +M+ + + + + LG++
Sbjct: 114 VRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNE 173
Query: 237 FASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLE 296
F ++SL+K Y++ G + +F+++ KD V W M+ G + G L ++ F M ++
Sbjct: 174 FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMD 233
Query: 297 GLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASR 356
+S P+ V VL VC + G ++HG +V +GV+ + + N+LL MY+ CG
Sbjct: 234 QIS--PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFD 291
Query: 357 DARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPAC 416
DA +F M V+W MI GYV + G E F +M S G+ P A++ SS+LP+
Sbjct: 292 DASKLFRMMSRADTVTWNCMISGYV-QSGLMEESLTFFYEMISSGVLPDAITFSSLLPSV 350
Query: 417 GRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWS 476
+ + ++ ++IH Y++R+ + DI +++A+ID Y K ++ A N+F + N D + ++
Sbjct: 351 SKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFT 410
Query: 477 MMIFGCSLHGQGKLGVDLFRQLERNSEAP 505
MI G +G +++FR L + +P
Sbjct: 411 AMISGYLHNGLYIDSLEMFRWLVKVKISP 439
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 145/291 (49%), Gaps = 5/291 (1%)
Query: 217 LRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCK--DVVSWTSMI 274
LRQG+ VH + + G+ + +L MY CGS D +F ++ + + W S+I
Sbjct: 51 LRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSII 110
Query: 275 RGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNG 334
V+NG L++A+ + +M G+S PD+ ++ C + + K + + G
Sbjct: 111 SSFVRNGLLNQALAFYFKMLCFGVS--PDVSTFPCLVKACVALKNFKGIDFLSDTVSSLG 168
Query: 335 VECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLF 394
++C+ ++++L+K Y + G +F+++ K V W M+ GY K G ++ V + F
Sbjct: 169 MDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDS-VIKGF 227
Query: 395 RKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKS 454
M + + P AV+ +L C G ++HG ++ +GV+F+ ++ N+++ MY K
Sbjct: 228 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 287
Query: 455 GAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAP 505
G A +F M+ DT++W+ MI G G + + F ++ + P
Sbjct: 288 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP 338
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 121/267 (45%), Gaps = 16/267 (5%)
Query: 307 VSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMP 366
+S +L C L+ G+++H +L+ N + D +L MYA CG+ D +F ++
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 367 SK--TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKH 424
+ ++ W S+I +V+ G N+ + KM G+ P + ++ AC + + K
Sbjct: 98 LRRSSIRPWNSIISSFVRN-GLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKG 156
Query: 425 GREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSL 484
+ + G++ + V++++I Y++ G I +F + +KD + W++M+ G +
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216
Query: 485 HGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRGPMIAHCA- 543
G + F + + +P + + L C++ + + G + G ++
Sbjct: 217 CGALDSVIKGFSVMRMDQISP-NAVTFDCVLSVCASKLLIDLGV----QLHGLVVVSGVD 271
Query: 544 -------QKVSLLARCGLFDEAMVFIR 563
+S+ ++CG FD+A R
Sbjct: 272 FEGSIKNSLLSMYSKCGRFDDASKLFR 298
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 169/568 (29%), Positives = 281/568 (49%), Gaps = 14/568 (2%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVD--CGSMRDARLVFEKMPCKDVVS-WTS 272
S+++ R +H + GL+ N LL+ GS+ A+L+F+ S W
Sbjct: 17 SMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNY 76
Query: 273 MIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVR 332
+IRG + ++ + RM L +S +PDL + L C I S+ EIHG ++R
Sbjct: 77 LIRGFSNSSSPLNSILFYNRMLLSSVS-RPDLFTFNFALKSCERIKSIPKCLEIHGSVIR 135
Query: 333 NGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFR 392
+G D +++ +L++ Y+ G+ A VF++MP + +VSW MI + G +N+
Sbjct: 136 SGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCF-SHVGLHNQALS 194
Query: 393 LFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYV 452
++++M +EG+ + ++ ++L +C +++ G +H E + VSNA+IDMY
Sbjct: 195 MYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYA 254
Query: 453 KSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYA 512
K G++ A+ VF M ++D ++W+ MI G +HG G + FR++ + P + +
Sbjct: 255 KCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRP-NAITFL 313
Query: 513 AALHACSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKI 567
L CS + +EG F + P + H V L R G + ++ I
Sbjct: 314 GLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSC 373
Query: 568 EQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKI 627
+ P + R LL C+IH LG+ +++L +LE NA +YVL+ + ++ +
Sbjct: 374 HEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASM 433
Query: 628 RETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKW 687
R+ IR L+ +W ++VH F D HP I S L + G +P+
Sbjct: 434 RKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPED 493
Query: 688 DFSLHDVDEER--ECTQIEHSELLALAFGLISSQAG-PIRLEKNSRVCRGCHDFAKFVSK 744
+R HSE LA+A+GL+ + AG +R+ KN RVCR CH F K+VSK
Sbjct: 494 SNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSK 553
Query: 745 VTGREIILKDPNFFHHFKHGHCTCEDFW 772
REII++D FHHF G C+C D+W
Sbjct: 554 AFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 118/274 (43%), Gaps = 13/274 (4%)
Query: 57 FDKSPEWDTLAWNTLIHTHLSNNHFPL-AISTFTQMLRHAVXXXXXXXXXXXXAS--RLA 113
FD P T WN LI SN+ PL +I + +ML +V S R+
Sbjct: 65 FDSDPS--TSDWNYLIRG-FSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIK 121
Query: 114 ADFSLGK--QLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTF 171
S+ K ++H ++ A +L+ Y++ + +A +FD+ W
Sbjct: 122 ---SIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNV 178
Query: 172 LAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLG 231
+ + G+ AL ++ RM + +L G +H IA +
Sbjct: 179 MICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIR 238
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFR 291
E VF SN+L+ MY CGS+ +A VF M +DV++W SMI G +G EA+ FR
Sbjct: 239 CESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFR 298
Query: 292 RMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGRE 325
+M G V+P+ + +L C G +K G E
Sbjct: 299 KMVASG--VRPNAITFLGLLLGCSHQGLVKEGVE 330
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 270 bits (689), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 172/625 (27%), Positives = 306/625 (48%), Gaps = 11/625 (1%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQM--LRHAVXXXXXXXXXXXXASRL 112
QVFDK P D ++W ++I +++ N+ A+ F+ M + HAV A
Sbjct: 61 QVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQ 120
Query: 113 AADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFL 172
+++ + G+ LH +AVK +L S + +L+ +Y + I + +F + + WT +
Sbjct: 121 SSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAI 180
Query: 173 AKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL 232
V G + L F M + ++ G+ +H + G
Sbjct: 181 ITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGF 240
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
+ +NSL MY +CG M+D +FE M +DVVSWTS+I + G+ +A+E F +
Sbjct: 241 VTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIK 300
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADC 352
M V P+ +++ C + L G ++H ++ G+ + +SN+++KMY+ C
Sbjct: 301 M--RNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTC 358
Query: 353 GASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSI 412
G A ++F+ M + ++SW+++I GY + GF E F+ F M G KPT +++S+
Sbjct: 359 GNLVSASVLFQGMRCRDIISWSTIIGGYCQ-AGFGEEGFKYFSWMRQSGTKPTDFALASL 417
Query: 413 LPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDT 472
L G +A + GR++H L G+E + V +++I+MY K G+I A +FGE + D
Sbjct: 418 LSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDI 477
Query: 473 ISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFN 532
+S + MI G + HG+ K +DLF + + P D + + L AC+ + + G FN
Sbjct: 478 VSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRP-DSVTFISVLTACTHSGQLDLGFHYFN 536
Query: 533 HIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEY 587
++ P H V LL R G +A I E ++ V LL C+ G+
Sbjct: 537 MMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDI 596
Query: 588 ALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLY 647
G++ E++ EL+P A V L N ++ G L+ +R+ ++ +G+ + +
Sbjct: 597 ERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKI 656
Query: 648 REKVHVFGTGDVSHPRKKEICSALQ 672
++ V F +GD HP+ ++I + L+
Sbjct: 657 KDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/508 (26%), Positives = 228/508 (44%), Gaps = 24/508 (4%)
Query: 150 DIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFH--RMVXXXXXXXXXXXXXX 207
++ A+ +FDK WT + K YV AL LF R+V
Sbjct: 55 NLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVV 114
Query: 208 XXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDV 267
++ G +H AVK L V+ +SLL MY G + + VF +MP ++
Sbjct: 115 LKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNA 174
Query: 268 VSWTSMIRGCVQNGELSEAMELFRRMNL-EGLSVKPDLVMVSTVLPVCGMIGSLKHGREI 326
V+WT++I G V G E + F M+ E LS D + L C + +K+G+ I
Sbjct: 175 VTWTAIITGLVHAGRYKEGLTYFSEMSRSEELS---DTYTFAIALKACAGLRQVKYGKAI 231
Query: 327 HGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGF 386
H +++ G + ++N+L MY +CG +D +FE M + VVSWTS+I Y K+ G
Sbjct: 232 HTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAY-KRIGQ 290
Query: 387 NNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNA 446
+ F KM + + P + +S+ AC ++ G ++H +L G+ ++VSN+
Sbjct: 291 EVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNS 350
Query: 447 VIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPL 506
++ MY G + A +F M +D ISWS +I G G G+ G F + ++ P
Sbjct: 351 MMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPT 410
Query: 507 DDNIYAAALHACSTARMFEEGR------VCFNHIRGPMIAHCAQKVSLLARCGLFDEAMV 560
D + A+ L + E GR +CF + + + +++ ++CG EA +
Sbjct: 411 DFAL-ASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVR--SSLINMYSKCGSIKEASM 467
Query: 561 FIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCEL--EPLNAENYVLLLNWHAGK 618
E + L ++ G HG+ + E+ ++ P ++ ++ +L
Sbjct: 468 IFGETDRDDIVS-LTAMINGYAEHGKSKEAIDLFEKSLKVGFRP-DSVTFISVLTACTHS 525
Query: 619 GKLDM----VDKIRETIRERGLKPKKAC 642
G+LD+ + ++ET R K C
Sbjct: 526 GQLDLGFHYFNMMQETYNMRPAKEHYGC 553
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 156/285 (54%), Gaps = 4/285 (1%)
Query: 237 FASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLE 296
F NS L+ ++ G++R AR VF+KMP D+VSWTS+I+ V EA+ LF M +
Sbjct: 41 FDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVV 100
Query: 297 GLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASR 356
+V PD ++S VL CG ++ +G +H Y V+ + V + ++LL MY G
Sbjct: 101 DHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKID 160
Query: 357 DARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMN-SEGLKPTAVSISSILPA 415
+ VF +MP + V+WT++I G V G + E F +M+ SE L T + + L A
Sbjct: 161 KSCRVFSEMPFRNAVTWTAIITGLVHAGRY-KEGLTYFSEMSRSEELSDT-YTFAIALKA 218
Query: 416 CGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISW 475
C + K+G+ IH +++ G + V+N++ MY + G + L +F M+E+D +SW
Sbjct: 219 CAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSW 278
Query: 476 SMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACST 520
+ +I GQ V+ F ++ RNS+ P ++ +A+ AC++
Sbjct: 279 TSLIVAYKRIGQEVKAVETFIKM-RNSQVPPNEQTFASMFSACAS 322
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 268 bits (684), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 185/640 (28%), Positives = 309/640 (48%), Gaps = 22/640 (3%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VFD + +AWNTLI ++ A F M+R V A ++
Sbjct: 169 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISR 228
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLI--ALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFL 172
+ +KL + + I +YA L DI ++ +FD + W +
Sbjct: 229 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTM 288
Query: 173 AKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQ---GRDVHLIAVK 229
+YV ++ELF + + +L+Q GR H K
Sbjct: 289 IGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASA--VSALQQVELGRQFHGFVSK 346
Query: 230 LGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMEL 289
E + NSL+ MY CGS+ + VF M +DVVSW +MI VQNG E + L
Sbjct: 347 NFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLML 406
Query: 290 FRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMY 349
M +G K D + V+ +L + + + G++ H +L+R G++ + + ++ L+ MY
Sbjct: 407 VYEMQKQGF--KIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM-NSYLIDMY 463
Query: 350 ADCGASRDARLVFEQ--MPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAV 407
+ G R ++ +FE + +W SMI GY + G + F +FRKM + ++P AV
Sbjct: 464 SKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNG-HTEKTFLVFRKMLEQNIRPNAV 522
Query: 408 SISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEM 467
+++SILPAC +I S G+++HG+ +R ++ ++ V++A++DMY K+GAI A ++F +
Sbjct: 523 TVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQT 582
Query: 468 NEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEG 527
E+++++++ MI G HG G+ + LF ++ + P D + A L ACS + + +EG
Sbjct: 583 KERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKP-DAITFVAVLSACSYSGLIDEG 641
Query: 528 RVCFNHIR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQH-PEVLRKLLEGC 581
F +R P H +L R G +EA F++ E + E+ LL C
Sbjct: 642 LKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSC 701
Query: 582 RIHGEYALGKQVIEQLCELEP-LNAENY-VLLLNWHAGKGKLDMVDKIRETIRERGLKPK 639
++HGE L + V E+L + + N Y VLL N +A + K VDK+R +RE+GLK +
Sbjct: 702 KLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKE 761
Query: 640 KACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMR 679
+ V+ F + D HP EI + G ++MR
Sbjct: 762 VGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMR 801
Score = 166 bits (420), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 146/603 (24%), Positives = 276/603 (45%), Gaps = 36/603 (5%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHA--VXXXXXXXXXXXXASRL 112
Q+FD P+ T+ WNT+I + NN A+ +++M + A A
Sbjct: 60 QLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAE 119
Query: 113 AADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIA------VAQTLFDKTAPFGS 166
+ GK +H H ++ +S +L+++Y S + V + +FD
Sbjct: 120 TKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNV 179
Query: 167 DCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLI 226
W L YV G A F M+ + S+++ + +
Sbjct: 180 VAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGL 239
Query: 227 AVKLGLE--GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELS 284
+KLG E ++F +S + MY + G + +R VF+ +++ W +MI VQN L
Sbjct: 240 MLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLV 299
Query: 285 EAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKH---GREIHGYLVRNGVECDVLL 341
E++ELF LE + K + T L + +L+ GR+ HG++ +N E +++
Sbjct: 300 ESIELF----LEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVI 355
Query: 342 SNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEG 401
N+L+ MY+ CG+ + VF M + VVSW +MI +V+ G ++E L +M +G
Sbjct: 356 VNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQN-GLDDEGLMLVYEMQKQG 414
Query: 402 LKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACAL 461
K ++++++L A + + + G++ H +L+R G++F+ +++ +IDMY KSG I +
Sbjct: 415 FKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQ 473
Query: 462 NVF--GEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACS 519
+F E+D +W+ MI G + +G + +FR++ + P + A+ L ACS
Sbjct: 474 KLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRP-NAVTVASILPACS 532
Query: 520 TARMFEEGR----VCFNHIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLR 575
+ G+ + + V + ++ G A + K E++
Sbjct: 533 QIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTK-ERNSVTYT 591
Query: 576 KLLEGCRIHGEYALGKQVIE-----QLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRET 630
++ G +G++ +G++ I Q ++P +A +V +L+ + G +D KI E
Sbjct: 592 TMILG---YGQHGMGERAISLFLSMQESGIKP-DAITFVAVLSACSYSGLIDEGLKIFEE 647
Query: 631 IRE 633
+RE
Sbjct: 648 MRE 650
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 166/386 (43%), Gaps = 13/386 (3%)
Query: 153 VAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRM--VXXXXXXXXXXXXXXXXX 210
+A+ LFD + W + ++ +P AL + RM
Sbjct: 57 LARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKA 116
Query: 211 XXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRD------ARLVFEKMPC 264
+L+ G+ VH ++ NSL+ MYV C + D R VF+ M
Sbjct: 117 CAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRR 176
Query: 265 KDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGR 324
K+VV+W ++I V+ G +EA F M + VKP V V P + S+K
Sbjct: 177 KNVVAWNTLISWYVKTGRNAEACRQFGIM--MRMEVKPSPVSFVNVFPAVSISRSIKKAN 234
Query: 325 EIHGYLVRNGVEC--DVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVK 382
+G +++ G E D+ + ++ + MYA+ G +R VF+ + + W +MI YV+
Sbjct: 235 VFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQ 294
Query: 383 KGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDIN 442
+ + S+ + V+ A + + GR+ HG++ +N E I
Sbjct: 295 NDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIV 354
Query: 443 VSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNS 502
+ N+++ MY + G++ + VF M E+D +SW+ MI +G G+ L ++++
Sbjct: 355 IVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 414
Query: 503 EAPLDDNIYAAALHACSTARMFEEGR 528
+D A L A S R E G+
Sbjct: 415 -FKIDYITVTALLSAASNLRNKEIGK 439
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 146/318 (45%), Gaps = 17/318 (5%)
Query: 250 GSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVST 309
G+ + AR +F+ +P V W ++I G + N EA+ + RM D S+
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 310 VLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRD------ARLVFE 363
L C +LK G+ +H +L+R ++ N+L+ MY C + D R VF+
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 364 QMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHK 423
M K VV+W ++I YVK G N E R F M +KP+ VS ++ PA S K
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGR-NAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIK 231
Query: 424 HGREIHGYLLRNGVEF--DINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFG 481
+G +L+ G E+ D+ V ++ I MY + G I + VF E++ W+ MI G
Sbjct: 232 KANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMI-G 290
Query: 482 CSLHGQGKL-GVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGR-----VCFNHIR 535
+ + ++LF + + E D+ Y A A S + E GR V N
Sbjct: 291 VYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRE 350
Query: 536 GPMIAHCAQKVSLLARCG 553
P++ + V + +RCG
Sbjct: 351 LPIVIVNSLMV-MYSRCG 367
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 265 bits (678), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 173/631 (27%), Positives = 290/631 (45%), Gaps = 11/631 (1%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAAD 115
VFD PE T+ W T+I + +++ F Q++ V A +
Sbjct: 205 VFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPF 264
Query: 116 FSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKL 175
GKQ+H H ++ L A + LI Y + A LF+ WT L
Sbjct: 265 LEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSG 324
Query: 176 YVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGE 235
Y + + A+ELF M + +L G VH +K L +
Sbjct: 325 YKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGND 384
Query: 236 VFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNG---ELSEAMELFRR 292
+ +NSL+ MY C + DAR VF+ DVV + +MI G + G EL EA+ +FR
Sbjct: 385 SYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRD 444
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADC 352
M ++P L+ ++L + SL ++IHG + + G+ D+ + L+ +Y++C
Sbjct: 445 MRFR--LIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNC 502
Query: 353 GASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSI 412
+D+RLVF++M K +V W SM GYV++ N E LF ++ +P + +++
Sbjct: 503 YCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSE-NEEALNLFLELQLSRERPDEFTFANM 561
Query: 413 LPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDT 472
+ A G +AS + G+E H LL+ G+E + ++NA++DMY K G+ A F +D
Sbjct: 562 VTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDV 621
Query: 473 ISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFN 532
+ W+ +I + HG+GK + + ++ P + + L ACS A + E+G F
Sbjct: 622 VCWNSVISSYANHGEGKKALQMLEKMMSEGIEP-NYITFVGVLSACSHAGLVEDGLKQFE 680
Query: 533 HIR----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYA 588
+ P H VSLL R G ++A I + + V R LL GC G
Sbjct: 681 LMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVE 740
Query: 589 LGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYR 648
L + E +P ++ ++ +L N +A KG K+RE ++ G+ + +W
Sbjct: 741 LAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGIN 800
Query: 649 EKVHVFGTGDVSHPRKKEICSALQGFMEEMR 679
++VH+F + D SH + +I L + ++R
Sbjct: 801 KEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 224/480 (46%), Gaps = 10/480 (2%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VF+K PE + ++W+T++ + + ++ F + R +
Sbjct: 100 KVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGL 159
Query: 115 DFSLGK----QLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWT 170
D G+ QL + VK + LI Y +I A+ +FD + WT
Sbjct: 160 D-GRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWT 218
Query: 171 FLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKL 230
+ V G +L+LF++++ ++ L G+ +H ++
Sbjct: 219 TMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRY 278
Query: 231 GLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELF 290
GLE + N L+ YV CG + A +F MP K+++SWT+++ G QN EAMELF
Sbjct: 279 GLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELF 338
Query: 291 RRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYA 350
M+ GL KPD+ S++L C + +L G ++H Y ++ + D ++N+L+ MYA
Sbjct: 339 TSMSKFGL--KPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYA 396
Query: 351 DCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGF--NNEVFRLFRKMNSEGLKPTAVS 408
C DAR VF+ + VV + +MI GY + G +E +FR M ++P+ ++
Sbjct: 397 KCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLT 456
Query: 409 ISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMN 468
S+L A + S ++IHG + + G+ DI +A+ID+Y + + VF EM
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK 516
Query: 469 EKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGR 528
KD + W+ M G + + ++LF +L+ + E P D+ +A + A + G+
Sbjct: 517 VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERP-DEFTFANMVTAAGNLASVQLGQ 575
Score = 186 bits (473), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 210/447 (46%), Gaps = 17/447 (3%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
H++F+ P + ++W TL+ + N A+ FT M + + +
Sbjct: 304 HKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASL 363
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
G Q+H + +K L + ++ +LI +YA D + A+ +FD A +D F A
Sbjct: 364 HALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFA--AADVVLFNA 421
Query: 174 KLYVLEGMPR--------SALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHL 225
++EG R AL +F M + SL + +H
Sbjct: 422 ---MIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHG 478
Query: 226 IAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSE 285
+ K GL ++FA ++L+ +Y +C ++D+RLVF++M KD+V W SM G VQ E E
Sbjct: 479 LMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEE 538
Query: 286 AMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTL 345
A+ LF + L +PD + ++ G + S++ G+E H L++ G+EC+ ++N L
Sbjct: 539 ALNLFLELQLS--RERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNAL 596
Query: 346 LKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPT 405
L MYA CG+ DA F+ S+ VV W S+I Y G + ++ KM SEG++P
Sbjct: 597 LDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGE-GKKALQMLEKMMSEGIEPN 655
Query: 406 AVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFG 465
++ +L AC + G + +LR G+E + ++ + ++G + A +
Sbjct: 656 YITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIE 715
Query: 466 EMNEKD-TISWSMMIFGCSLHGQGKLG 491
+M K I W ++ GC+ G +L
Sbjct: 716 KMPTKPAAIVWRSLLSGCAKAGNVELA 742
Score = 156 bits (395), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 169/308 (54%), Gaps = 21/308 (6%)
Query: 223 VHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGE 282
VH + GLE + + SN L+ +Y G M AR VFEKMP +++VSW++M+ C +G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 283 LSEAMELFRRMNLEGLSVK---PDLVMVSTVLPVC-GMIGSLKHGR----EIHGYLVRNG 334
E++ +F LE + P+ ++S+ + C G+ G GR ++ +LV++G
Sbjct: 126 YEESLVVF----LEFWRTRKDSPNEYILSSFIQACSGLDG---RGRWMVFQLQSFLVKSG 178
Query: 335 VECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLF 394
+ DV + L+ Y G ARLVF+ +P K+ V+WT+MI G VK G + +LF
Sbjct: 179 FDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGR-SYVSLQLF 237
Query: 395 RKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKS 454
++ + + P +S++L AC + + G++IH ++LR G+E D ++ N +ID YVK
Sbjct: 238 YQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKC 297
Query: 455 GAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAA 514
G + A +F M K+ ISW+ ++ G + K ++LF + + P ++YA +
Sbjct: 298 GRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP---DMYACS 354
Query: 515 --LHACST 520
L +C++
Sbjct: 355 SILTSCAS 362
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 7/219 (3%)
Query: 320 LKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRG 379
L + +HG ++ G+E D LSN L+ +Y+ G AR VFE+MP + +VSW++M+
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119
Query: 380 YVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGR----EIHGYLLRN 435
G + + + P +SS + AC + GR ++ +L+++
Sbjct: 120 CNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSFLVKS 177
Query: 436 GVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLF 495
G + D+ V +ID Y+K G I A VF + EK T++W+ MI GC G+ + + LF
Sbjct: 178 GFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLF 237
Query: 496 RQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHI 534
QL ++ P D I + L ACS E G+ HI
Sbjct: 238 YQLMEDNVVP-DGYILSTVLSACSILPFLEGGKQIHAHI 275
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 265 bits (678), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 174/651 (26%), Positives = 311/651 (47%), Gaps = 31/651 (4%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VF PE ++++W+ +I + NN LA+ F +M + + +
Sbjct: 236 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALS 295
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
+ LG QLH HA+K ++ A + +YA D++ AQ LFD + + +
Sbjct: 296 ELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMIT 355
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
Y E AL LFHR++ ++ L +G ++ +A+K L
Sbjct: 356 GYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSL 415
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
+V +N+ + MY C ++ +A VF++M +D VSW ++I QNG+ E + LF M
Sbjct: 416 DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML 475
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGA 354
++PD ++L C GSL +G EIH +V++G+ + + +L+ MY+ CG
Sbjct: 476 RS--RIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGM 532
Query: 355 SRDARLV----------------FEQMPSKTV----VSWTSMIRGYVKKGGFNNEVFRLF 394
+A + E+M +K + VSW S+I GYV K + + LF
Sbjct: 533 IEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQ-SEDAQMLF 591
Query: 395 RKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKS 454
+M G+ P + +++L C +AS G++IH +++ ++ D+ + + ++DMY K
Sbjct: 592 TRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKC 651
Query: 455 GAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAA 514
G + + +F + +D ++W+ MI G + HG+G+ + LF ++ + P + + +
Sbjct: 652 GDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKP-NHVTFISI 710
Query: 515 LHACSTARMFEEGRVCFNHIR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQ 569
L AC+ + ++G F ++ P + H + V +L + G A+ IRE E
Sbjct: 711 LRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEA 770
Query: 570 HPEVLRKLLEGCRIH-GEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIR 628
+ R LL C IH + ++ L L+P ++ Y LL N +A G + V +R
Sbjct: 771 DDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLR 830
Query: 629 ETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMR 679
+R LK + C+W ++++HVF GD +HPR +EI L EM+
Sbjct: 831 RNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 881
Score = 176 bits (446), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 129/529 (24%), Positives = 232/529 (43%), Gaps = 41/529 (7%)
Query: 65 TLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAADFSLGKQLHT 124
+++N + +S P + S FT L LGKQ H
Sbjct: 14 VVSFNRCLTEKISYRRVP-SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHA 72
Query: 125 HAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDK-------------------TAPFG 165
H + L L+ +Y + D A +FDK F
Sbjct: 73 HMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFK 132
Query: 166 SDC------------WTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXM 213
++ W + Y+ G ++E+F M
Sbjct: 133 ANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSF 192
Query: 214 MGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSM 273
+ G +H I V++G + +V A+++LL MY ++ VF+ +P K+ VSW+++
Sbjct: 193 LEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAI 252
Query: 274 IRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN 333
I GCVQN LS A++ F+ M V + ++VL C + L+ G ++H + +++
Sbjct: 253 IAGCVQNNLLSLALKFFKEMQKVNAGVSQSIY--ASVLRSCAALSELRLGGQLHAHALKS 310
Query: 334 GVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKG-GFNNEVFR 392
D ++ L MYA C +DA+++F+ + S+ +MI GY ++ GF +
Sbjct: 311 DFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGF--KALL 368
Query: 393 LFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYV 452
LF ++ S GL +S+S + AC + G +I+G +++ + D+ V+NA IDMY
Sbjct: 369 LFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYG 428
Query: 453 KSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYA 512
K A+A A VF EM +D +SW+ +I +G+G + LF + R+ P D+ +
Sbjct: 429 KCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEP-DEFTFG 487
Query: 513 AALHACSTARMFEEGRVCFNHIRGPMIAHCAQKVSLL---ARCGLFDEA 558
+ L AC+ + + + ++ M ++ + SL+ ++CG+ +EA
Sbjct: 488 SILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 536
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 147/615 (23%), Positives = 257/615 (41%), Gaps = 38/615 (6%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
+ F+ P D ++WN+++ +L N +I F M R +
Sbjct: 134 NSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFL 193
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
D SLG Q+H V++ + AL+ +YA + +F S W+ +
Sbjct: 194 EDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAII 253
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
V + AL+ F M + LR G +H A+K
Sbjct: 254 AGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFA 313
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
+ + L MY C +M+DA+++F+ + S+ +MI G Q +A+ LF R+
Sbjct: 314 ADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRL 373
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCG 353
GL D + +S V C ++ L G +I+G +++ + DV ++N + MY C
Sbjct: 374 MSSGLGF--DEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQ 431
Query: 354 ASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSIL 413
A +A VF++M + VSW ++I + ++ G E LF M ++P + SIL
Sbjct: 432 ALAEAFRVFDEMRRRDAVSWNAIIAAH-EQNGKGYETLFLFVSMLRSRIEPDEFTFGSIL 490
Query: 414 PACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACA----------LNV 463
AC S +G EIH ++++G+ + +V ++IDMY K G I A NV
Sbjct: 491 KACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANV 549
Query: 464 FGEMNEKDT----------ISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAA 513
G M E + +SW+ +I G + Q + LF ++ P D YA
Sbjct: 550 SGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITP-DKFTYAT 608
Query: 514 ALHACSTARMFEEGRVCFNHIRGPMIAH----CAQKVSLLARCG-LFDEAMVFIREQKIE 568
L C+ G+ + + C+ V + ++CG L D ++F E+ +
Sbjct: 609 VLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF--EKSLR 666
Query: 569 QHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIR 628
+ ++ G HG+ Q+ E++ LE + N+V ++ + ++DK
Sbjct: 667 RDFVTWNAMICGYAHHGKGEEAIQLFERMI-LENIKP-NHVTFISILRACAHMGLIDKGL 724
Query: 629 ETI----RERGLKPK 639
E R+ GL P+
Sbjct: 725 EYFYMMKRDYGLDPQ 739
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 174/569 (30%), Positives = 283/569 (49%), Gaps = 22/569 (3%)
Query: 223 VHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGE 282
+H + +KLG + F N L+ YV + AR +F++M +VVSWTS+I G G+
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 283 LSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLS 342
A+ +F++M+ E V P+ ++V C + + G+ IH L +G+ ++++S
Sbjct: 111 PQNALSMFQKMH-EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVS 169
Query: 343 NTLLKMYADCGASRDARLVFEQM--PSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNS- 399
++L+ MY C AR VF+ M + VVSWTSMI Y + +E LFR N+
Sbjct: 170 SSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNAR-GHEAIELFRSFNAA 228
Query: 400 -EGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIA 458
+ ++S++ AC + + G+ HG + R G E + V+ +++DMY K G+++
Sbjct: 229 LTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLS 288
Query: 459 CALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHAC 518
CA +F + IS++ MI + HG G+ V LF ++ P + LHAC
Sbjct: 289 CAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINP-NYVTLLGVLHAC 347
Query: 519 STARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIR--EQKIEQHP 571
S + + EG + + P H V +L R G DEA + E EQ
Sbjct: 348 SHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGA 407
Query: 572 EVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETI 631
+ LL R+HG + + ++L + Y+ L N +A G + + +R +
Sbjct: 408 LLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEM 467
Query: 632 RERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEG------VEP 685
+ G ++AC+W ++ V+VF GD+S EI L+ + M+ G +
Sbjct: 468 KRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMIT 527
Query: 686 KWDFSLHDVDEERECTQIE-HSELLALAFGLISSQAGP-IRLEKNSRVCRGCHDFAKFVS 743
DVDEE + + H E LALA+GL+ AG IR+ N R+CR CH+ K +S
Sbjct: 528 TSSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLIS 587
Query: 744 KVTGREIILKDPNFFHHFKHGHCTCEDFW 772
++ REI+++D N FH FK+G CTC D+W
Sbjct: 588 EIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 189/405 (46%), Gaps = 8/405 (1%)
Query: 122 LHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGM 181
LHT +KL +S T+ L+ Y L +I A+ LFD+ WT + Y G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 182 PRSALELFHRM-VXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASN 240
P++AL +F +M + R G+++H GL + S+
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 241 SLLKMYVDCGSMRDARLVFEKM--PCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGL 298
SL+ MY C + AR VF+ M ++VVSWTSMI QN EA+ELFR N
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 299 SVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDA 358
S + + M+++V+ C +G L+ G+ HG + R G E + +++ +LL MYA CG+ A
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 359 RLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGR 418
+F ++ +V+S+TSMI K G +LF +M + + P V++ +L AC
Sbjct: 291 EKIFLRIRCHSVISYTSMIMAKAKH-GLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSH 349
Query: 419 IASHKHGREIHGYLL-RNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMN---EKDTIS 474
G E + + GV D V+DM + G + A + + E+ +
Sbjct: 350 SGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALL 409
Query: 475 WSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACS 519
W ++ LHG+ ++ + ++L ++++ I + +A S
Sbjct: 410 WGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVS 454
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 118/279 (42%), Gaps = 13/279 (4%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLR-HAVXXXXXXXXXXXXASRLA 113
++FD+ E + ++W ++I + A+S F +M V A
Sbjct: 85 KLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSAL 144
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLI---ALIHLYASLDDIAVAQTLFDKTAPFGSDC-- 168
A+ +GK +H +L +S ++ +L+ +Y +D+ A+ +FD +G +
Sbjct: 145 AESRIGKNIHA---RLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVS 201
Query: 169 WTFLAKLYVLEGMPRSALELFHRM--VXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLI 226
WT + Y A+ELF +G L+ G+ H +
Sbjct: 202 WTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGL 261
Query: 227 AVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEA 286
+ G E + SLL MY CGS+ A +F ++ C V+S+TSMI ++G A
Sbjct: 262 VTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAA 321
Query: 287 MELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGRE 325
++LF M + G + P+ V + VL C G + G E
Sbjct: 322 VKLFDEM-VAG-RINPNYVTLLGVLHACSHSGLVNEGLE 358
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 176/581 (30%), Positives = 283/581 (48%), Gaps = 28/581 (4%)
Query: 217 LRQGRDVHLIAVKLGLEGE---VFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSM 273
+ Q + +H ++ E +F +L++ + A VF+ + W ++
Sbjct: 61 MSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTL 120
Query: 274 IRGCVQN-GELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVR 332
IR C + EA L+R+M LE PD VL C I G+++H +V+
Sbjct: 121 IRACAHDVSRKEEAFMLYRKM-LERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVK 179
Query: 333 NGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFR 392
+G DV ++N L+ +Y CG AR VF++MP +++VSW SMI V+ G +++ +
Sbjct: 180 HGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDS-ALQ 238
Query: 393 LFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRN---GVEFDINVSNAVID 449
LFR+M +P ++ S+L AC + S G H +LLR V D+ V N++I+
Sbjct: 239 LFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIE 297
Query: 450 MYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLF-RQLERNSEAPLDD 508
MY K G++ A VF M ++D SW+ MI G + HG+ + ++ F R +++ +
Sbjct: 298 MYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNS 357
Query: 509 NIYAAALHACSTARMFEEGRVCF-----NHIRGPMIAHCAQKVSLLARCGLFDEAMVFIR 563
+ L AC+ +GR F ++ P + H V L+AR G EA+ +
Sbjct: 358 VTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVM 417
Query: 564 EQKIEQHPEVLRKLLEGCRIHGEYA-----LGKQVIEQLCELEPLNAE---NYVLLLNWH 615
++ + R LL+ C G + + +I + E N YVLL +
Sbjct: 418 SMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVY 477
Query: 616 AGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFM 675
A + + V +R+ + E G++ + C+ H F GD SHP+ K+I L+
Sbjct: 478 ASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVID 537
Query: 676 EEMRTEGVEP-KWDFSLHDV--DEERECTQIEHSELLALAFGLIS-SQAGPIRLEKNSRV 731
+ +R+ G P + L D D +E + HSE LA+AFGLI+ PIR+ KN RV
Sbjct: 538 DRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRV 597
Query: 732 CRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
C CH+ K +SKV EII++D FHHFK G C+C D+W
Sbjct: 598 CNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 161 bits (408), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 188/408 (46%), Gaps = 19/408 (4%)
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLI---ALIHLYASLDDIAVAQTLFDKTAPFGSDCWT 170
+D S KQLH ++ TL ++ L +S D+ A +FD S W
Sbjct: 59 SDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWN 118
Query: 171 FLAKLYVLE-GMPRSALELFHRMVXXXXXXXXXXXXXXXXXX-XMMGSLRQGRDVHLIAV 228
L + + A L+ +M+ + +G+ VH V
Sbjct: 119 TLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIV 178
Query: 229 KLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAME 288
K G G+V+ +N L+ +Y CG + AR VF++MP + +VSW SMI V+ GE A++
Sbjct: 179 KHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQ 238
Query: 289 LFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN---GVECDVLLSNTL 345
LFR M S +PD + +VL C +GSL G H +L+R V DVL+ N+L
Sbjct: 239 LFREMQ---RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSL 295
Query: 346 LKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKM--NSEGLK 403
++MY CG+ R A VF+ M + + SW +MI G+ G E F +M E ++
Sbjct: 296 IEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGR-AEEAMNFFDRMVDKRENVR 354
Query: 404 PTAVSISSILPACGRIASHKHGREIHGYLLRNG-VEFDINVSNAVIDMYVKSGAIACALN 462
P +V+ +L AC GR+ ++R+ +E + ++D+ ++G I A++
Sbjct: 355 PNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAID 414
Query: 463 VFGEMNEK-DTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDN 509
+ M K D + W ++ C G V+L ++ RN +DN
Sbjct: 415 MVMSMPMKPDAVIWRSLLDACCKKGA---SVELSEEIARNIIGTKEDN 459
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 141/338 (41%), Gaps = 8/338 (2%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSN-NHFPLAISTFTQML-RHAVXXXXXXXXXXXXASRL 112
+VFD + WNTLI + + A + +ML R A
Sbjct: 104 RVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAY 163
Query: 113 AADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFL 172
FS GKQ+H VK + LIHLY S + +A+ +FD+ W +
Sbjct: 164 IFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSM 223
Query: 173 AKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVK--- 229
V G SAL+LF M +GSL G H ++
Sbjct: 224 IDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCD 282
Query: 230 LGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMEL 289
+ + +V NSL++MY CGS+R A VF+ M +D+ SW +MI G +G EAM
Sbjct: 283 VDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNF 342
Query: 290 FRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNG-VECDVLLSNTLLKM 348
F RM + +V+P+ V +L C G + GR+ +VR+ +E + ++ +
Sbjct: 343 FDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDL 402
Query: 349 YADCGASRDARLVFEQMPSKT-VVSWTSMIRGYVKKGG 385
A G +A + MP K V W S++ KKG
Sbjct: 403 IARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGA 440
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 262 bits (670), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 167/625 (26%), Positives = 297/625 (47%), Gaps = 9/625 (1%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
Q+F + + WNTL+ + + + F+ M R A
Sbjct: 15 QMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELR 74
Query: 115 DFSLGKQLHTHAVK-LALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
+ + G+ +H K + L S + +LI++Y + A +FD+ W+ +
Sbjct: 75 EVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMV 134
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXX-XMMGSLRQGRDVHLIAVKLGL 232
+ G P A+E F RMV + + R GR VH ++ G
Sbjct: 135 SGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGF 194
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
++ NSLL Y + ++A +F+ + KDV+SW+++I VQNG +EA+ +F
Sbjct: 195 SNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFND 254
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADC 352
M +G +P++ V VL C L+ GR+ H +R G+E +V +S L+ MY C
Sbjct: 255 MMDDG--TEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKC 312
Query: 353 GASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSI 412
+ +A VF ++P K VVSW ++I G+ G + + + +P A+ + +
Sbjct: 313 FSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKV 372
Query: 413 LPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDT 472
L +C + + + H Y+++ G + + + +++++Y + G++ A VF + KDT
Sbjct: 373 LGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDT 432
Query: 473 ISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEG----R 528
+ W+ +I G +HG+G ++ F + ++SE ++ + + L ACS A + EG +
Sbjct: 433 VVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFK 492
Query: 529 VCFNHIR-GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEY 587
+ N R P + H A V LL R G D A+ + P++L LL CRIH
Sbjct: 493 LMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNG 552
Query: 588 ALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLY 647
+ + V ++L ELE +A Y+L+ N + KG+ + V+K+R ++++RG+K A +
Sbjct: 553 EMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEI 612
Query: 648 REKVHVFGTGDVSHPRKKEICSALQ 672
R KVH F D HP K+ + L+
Sbjct: 613 RRKVHRFVADDELHPEKEPVYGLLK 637
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 148/277 (53%), Gaps = 6/277 (2%)
Query: 254 DARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPV 313
DAR +F +M + + W ++++ + + E + F M + KPD + L
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRD--EEKPDNFTLPVALKA 69
Query: 314 CGMIGSLKHGREIHGYLVRN-GVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVS 372
CG + + +G IHG++ ++ + D+ + ++L+ MY CG +A +F+++ +V+
Sbjct: 70 CGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVT 129
Query: 373 WTSMIRGYVKKGGFNNEVFRLFRKM-NSEGLKPTAVSISSILPACGRIASHKHGREIHGY 431
W+SM+ G+ +K G + FR+M + + P V++ +++ AC ++++ + GR +HG+
Sbjct: 130 WSSMVSGF-EKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGF 188
Query: 432 LLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLG 491
++R G D+++ N++++ Y KS A A+N+F + EKD ISWS +I +G
Sbjct: 189 VIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEA 248
Query: 492 VDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGR 528
+ +F + + P + L AC+ A E+GR
Sbjct: 249 LLVFNDMMDDGTEP-NVATVLCVLQACAAAHDLEQGR 284
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 89/176 (50%), Gaps = 2/176 (1%)
Query: 354 ASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSIL 413
+S DAR +F +M +++ W ++++ ++ + EV F M + KP ++ L
Sbjct: 9 SSVDARQMFGEMTKRSLYQWNTLLKSLSREKQW-EEVLYHFSHMFRDEEKPDNFTLPVAL 67
Query: 414 PACGRIASHKHGREIHGYLLRN-GVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDT 472
ACG + +G IHG++ ++ + D+ V +++I MY+K G + AL +F E+ + D
Sbjct: 68 KACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDI 127
Query: 473 ISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGR 528
++WS M+ G +G V+ FR++ S+ D + AC+ GR
Sbjct: 128 VTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGR 183
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 187/634 (29%), Positives = 298/634 (47%), Gaps = 12/634 (1%)
Query: 55 QVFDKSPE-WDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
++FD E D + WN+++ ++ ++ + F +M A
Sbjct: 238 RLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGF 297
Query: 114 ADFSLGKQLHTHAVKLAL-SSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFL 172
+ LGK++H +K + SS + ALI +Y + A+ + + W L
Sbjct: 298 SYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSL 357
Query: 173 AKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL 232
K YV M + ALE F M+ + +L G ++H +K G
Sbjct: 358 IKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGW 417
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
+ + N+L+ MY C F +M KD++SWT++I G QN EA+ELFR
Sbjct: 418 DSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRD 477
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADC 352
+ + + + D +++ ++L ++ S+ +EIH +++R G+ D ++ N L+ +Y C
Sbjct: 478 VAKKRMEI--DEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKC 534
Query: 353 GASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSI 412
A VFE + K VVSWTSMI G +E LFR+M GL +V++ I
Sbjct: 535 RNMGYATRVFESIKGKDVVSWTSMISSSALNGN-ESEAVELFRRMVETGLSADSVALLCI 593
Query: 413 LPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDT 472
L A +++ GREIH YLLR G + +++ AV+DMY G + A VF + K
Sbjct: 594 LSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGL 653
Query: 473 ISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFN 532
+ ++ MI +HG GK V+LF ++ + +P D + A L+ACS A + +EGR
Sbjct: 654 LQYTSMINAYGMHGCGKAAVELFDKMRHENVSP-DHISFLALLYACSHAGLLDEGRGFLK 712
Query: 533 HIR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEY 587
+ P H V +L R EA F++ K E EV LL CR H E
Sbjct: 713 IMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEK 772
Query: 588 ALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLY 647
+G+ ++L ELEP N N VL+ N A +G+ + V+K+R ++ G++ C+W
Sbjct: 773 EIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEM 832
Query: 648 REKVHVFGTGDVSHPRKKEICSALQGFMEEMRTE 681
KVH F D SHP KEI L ++ E
Sbjct: 833 DGKVHKFTARDKSHPESKEIYEKLSEVTRKLERE 866
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/446 (29%), Positives = 214/446 (47%), Gaps = 6/446 (1%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VFD+ P+ AWNT+I ++SN A++ + M V A
Sbjct: 137 KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLR 196
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDC-WTFLA 173
D G +LH+ VKL S + AL+ +YA DD++ A+ LFD G W +
Sbjct: 197 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 256
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL- 232
Y G LELF M + G+++H +K
Sbjct: 257 SSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 316
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
E++ N+L+ MY CG M A + +M DVV+W S+I+G VQN EA+E F
Sbjct: 317 SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 376
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADC 352
M G K D V +++++ G + +L G E+H Y++++G + ++ + NTL+ MY+ C
Sbjct: 377 MIAAGH--KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKC 434
Query: 353 GASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSI 412
+ F +M K ++SWT++I GY + + E LFR + + ++ + + SI
Sbjct: 435 NLTCYMGRAFLRMHDKDLISWTTVIAGYA-QNDCHVEALELFRDVAKKRMEIDEMILGSI 493
Query: 413 LPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDT 472
L A + S +EIH ++LR G+ D + N ++D+Y K + A VF + KD
Sbjct: 494 LRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDV 552
Query: 473 ISWSMMIFGCSLHGQGKLGVDLFRQL 498
+SW+ MI +L+G V+LFR++
Sbjct: 553 VSWTSMISSSALNGNESEAVELFRRM 578
Score = 176 bits (446), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 195/409 (47%), Gaps = 7/409 (1%)
Query: 117 SLGKQLHTHAVKLALSSRAHTLIA-LIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKL 175
S G+QLH+ K S L L+ +Y + A+ +FD+ + W +
Sbjct: 97 SQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGA 156
Query: 176 YVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGE 235
YV G P SAL L+ M + +R G ++H + VKLG
Sbjct: 157 YVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHST 216
Query: 236 VFASNSLLKMYVDCGSMRDARLVFEKMPCK-DVVSWTSMIRGCVQNGELSEAMELFRRMN 294
F N+L+ MY + AR +F+ K D V W S++ +G+ E +ELFR M+
Sbjct: 217 GFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMH 276
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGV-ECDVLLSNTLLKMYADCG 353
+ G + P+ + + L C K G+EIH ++++ ++ + N L+ MY CG
Sbjct: 277 MTGPA--PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCG 334
Query: 354 ASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSIL 413
A + QM + VV+W S+I+GYV+ + E F M + G K VS++SI+
Sbjct: 335 KMPQAERILRQMNNADVVTWNSLIKGYVQNLMY-KEALEFFSDMIAAGHKSDEVSMTSII 393
Query: 414 PACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTI 473
A GR+++ G E+H Y++++G + ++ V N +IDMY K F M++KD I
Sbjct: 394 AASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLI 453
Query: 474 SWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTAR 522
SW+ +I G + + ++LFR + + +D+ I + L A S +
Sbjct: 454 SWTTVIAGYAQNDCHVEALELFRDVAKK-RMEIDEMILGSILRASSVLK 501
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 143/286 (50%), Gaps = 6/286 (2%)
Query: 216 SLRQGRDVHLIAVKLGLEGEV-FASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMI 274
++ QGR +H K E+ F + L+ MY CGS+ DA VF++MP + +W +MI
Sbjct: 95 AVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMI 154
Query: 275 RGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNG 334
V NGE + A+ L+ M +EG+ + L +L C + ++ G E+H LV+ G
Sbjct: 155 GAYVSNGEPASALALYWNMRVEGVPL--GLSSFPALLKACAKLRDIRSGSELHSLLVKLG 212
Query: 335 VECDVLLSNTLLKMYADCGASRDARLVFEQMPSK-TVVSWTSMIRGYVKKGGFNNEVFRL 393
+ N L+ MYA AR +F+ K V W S++ Y G + E L
Sbjct: 213 YHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGK-SLETLEL 271
Query: 394 FRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGV-EFDINVSNAVIDMYV 452
FR+M+ G P + +I S L AC + K G+EIH +L++ ++ V NA+I MY
Sbjct: 272 FREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYT 331
Query: 453 KSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQL 498
+ G + A + +MN D ++W+ +I G + K ++ F +
Sbjct: 332 RCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDM 377
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 141/293 (48%), Gaps = 16/293 (5%)
Query: 280 NGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN--GVEC 337
+G L+EA F+R+++ + + VL +CG ++ GR++H + + E
Sbjct: 61 DGVLTEA---FQRLDVS--ENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFEL 115
Query: 338 DVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKM 397
D L+ L+ MY CG+ DA VF++MP +T +W +MI YV G L+ M
Sbjct: 116 D-FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGE-PASALALYWNM 173
Query: 398 NSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAI 457
EG+ S ++L AC ++ + G E+H L++ G + NA++ MY K+ +
Sbjct: 174 RVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDL 233
Query: 458 ACALNVFGEMNEK-DTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALH 516
+ A +F EK D + W+ ++ S G+ ++LFR++ AP I +AL
Sbjct: 234 SAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTI-VSALT 292
Query: 517 AC---STARMFEE--GRVCFNHIRGPMIAHCAQKVSLLARCGLFDEAMVFIRE 564
AC S A++ +E V + + C +++ RCG +A +R+
Sbjct: 293 ACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQ 345
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 71/144 (49%), Gaps = 4/144 (2%)
Query: 386 FNNEVFRLFRKMN-SEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDIN-V 443
F+ + F++++ SE P + + +L CG+ + GR++H + + F+++ +
Sbjct: 60 FDGVLTEAFQRLDVSENNSPVE-AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFL 118
Query: 444 SNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSE 503
+ ++ MY K G++ A VF EM ++ +W+ MI +G+ + L+ + R
Sbjct: 119 AGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNM-RVEG 177
Query: 504 APLDDNIYAAALHACSTARMFEEG 527
PL + + A L AC+ R G
Sbjct: 178 VPLGLSSFPALLKACAKLRDIRSG 201
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 259 bits (662), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 173/573 (30%), Positives = 285/573 (49%), Gaps = 35/573 (6%)
Query: 115 DFSLGKQLHTHAVK---LALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAP--FGSDCW 169
D+ G+Q+H V+ L S RA T +L+++YA + A +F + FG +
Sbjct: 75 DYVSGQQIHGFMVRKGFLDDSPRAGT--SLVNMYAKCGLMRRAVLVFGGSERDVFG---Y 129
Query: 170 TFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVK 229
L +V+ G P A+E + M M L + VH +A K
Sbjct: 130 NALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSDVKKVHGLAFK 188
Query: 230 LGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKD-VVSWTSMIRGCVQNGELSEAME 288
LG + + + + L+ Y S+ DA+ VF+++P +D V W +++ G Q +A+
Sbjct: 189 LGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALL 248
Query: 289 LFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKM 348
+F +M EG+ V +++VL + G + +GR IHG V+ G D+++SN L+ M
Sbjct: 249 VFSKMREEGVGVSRH--TITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDM 306
Query: 349 YADCGASRDARLVFEQMPSKTVVSWTSM--IRGYVKKGGFNNEVFRLFRKMNSEGLKPTA 406
Y +A +FE M + + +W S+ + Y G ++ LF +M G++P
Sbjct: 307 YGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYC---GDHDGTLALFERMLCSGIRPDI 363
Query: 407 VSISSILPACGRIASHKHGREIHGYLLRNGV-------EFDINVSNAVIDMYVKSGAIAC 459
V+++++LP CGR+AS + GREIHGY++ +G+ EF + N+++DMYVK G +
Sbjct: 364 VTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEF---IHNSLMDMYVKCGDLRD 420
Query: 460 ALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACS 519
A VF M KD+ SW++MI G + G+L +D+F + R P D+ + L ACS
Sbjct: 421 ARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKP-DEITFVGLLQACS 479
Query: 520 TARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVL 574
+ EGR + P H A + +L R +EA + I +P V
Sbjct: 480 HSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVW 539
Query: 575 RKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRER 634
R +L CR+HG L ++L ELEP + YVL+ N + GK + V +R+ +R++
Sbjct: 540 RSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQ 599
Query: 635 GLKPKKACTWTLYREKVHVFGTGDVSHPRKKEI 667
+K C+W + + VH F TG+ +HP K I
Sbjct: 600 NVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSI 632
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 123/280 (43%), Gaps = 11/280 (3%)
Query: 54 HQVFDKSPEWD-TLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRL 112
+VFD+ P+ D ++ WN L++ + F A+ F++M V A +
Sbjct: 215 QKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTV 274
Query: 113 AADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFL 172
+ D G+ +H AVK S ALI +Y + A ++F+ W +
Sbjct: 275 SGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSV 334
Query: 173 AKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL 232
++ G L LF RM+ + SLRQGR++H + GL
Sbjct: 335 LCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGL 394
Query: 233 ----EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGC-VQN-GELSEA 286
F NSL+ MYV CG +RDAR+VF+ M KD SW MI G VQ+ GEL A
Sbjct: 395 LNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGEL--A 452
Query: 287 MELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREI 326
+++F M G VKPD + +L C G L GR
Sbjct: 453 LDMFSCMCRAG--VKPDEITFVGLLQACSHSGFLNEGRNF 490
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 258 bits (660), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 174/636 (27%), Positives = 293/636 (46%), Gaps = 15/636 (2%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VFD PE + +++ ++I + N AI + +ML+ + A ++
Sbjct: 123 EVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSS 182
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
D LGKQLH +KL SS ALI +Y + ++ A +F W+ +
Sbjct: 183 DVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIA 242
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQ---GRDVHLIAVKLG 231
+ G AL M+ SL + G +H + +K
Sbjct: 243 GFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKA--CSSLLRPDYGSQIHGLCIKSE 300
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFR 291
L G A SL MY CG + AR VF+++ D SW +I G NG EA+ +F
Sbjct: 301 LAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFS 360
Query: 292 RMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYAD 351
+M G PD + + ++L +L G +IH Y+++ G D+ + N+LL MY
Sbjct: 361 QMRSSGF--IPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTF 418
Query: 352 CGASRDARLVFEQMPSKT-VVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSIS 410
C +FE + VSW +++ ++ E+ RLF+ M +P +++
Sbjct: 419 CSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQ-PVEMLRLFKLMLVSECEPDHITMG 477
Query: 411 SILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK 470
++L C I+S K G ++H Y L+ G+ + + N +IDMY K G++ A +F M+ +
Sbjct: 478 NLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR 537
Query: 471 DTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVC 530
D +SWS +I G + G G+ + LF++++ P + + L ACS + EEG
Sbjct: 538 DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEP-NHVTFVGVLTACSHVGLVEEGLKL 596
Query: 531 F-----NHIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHG 585
+ H P HC+ V LLAR G +EA FI E K+E V + LL C+ G
Sbjct: 597 YATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQG 656
Query: 586 EYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWT 645
L ++ E + +++P N+ +VLL + HA G + +R ++++ +K +W
Sbjct: 657 NVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWI 716
Query: 646 LYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTE 681
+K+H+F D+ HP + +I + L +M E
Sbjct: 717 EIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLDE 752
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 152/291 (52%), Gaps = 4/291 (1%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIR 275
SL QGR +H + + + +N +L MY CGS+RDAR VF+ MP +++VS+TS+I
Sbjct: 82 SLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVIT 141
Query: 276 GCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGV 335
G QNG+ +EA+ L+ +M E L PD +++ C + G+++H +++
Sbjct: 142 GYSQNGQGAEAIRLYLKMLQEDLV--PDQFAFGSIIKACASSSDVGLGKQLHAQVIKLES 199
Query: 336 ECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFR 395
++ N L+ MY DA VF +P K ++SW+S+I G+ + GF E +
Sbjct: 200 SSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGF-SQLGFEFEALSHLK 258
Query: 396 KMNSEGL-KPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKS 454
+M S G+ P S L AC + +G +IHG +++ + + ++ DMY +
Sbjct: 259 EMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARC 318
Query: 455 GAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAP 505
G + A VF ++ DT SW+++I G + +G V +F Q+ + P
Sbjct: 319 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIP 369
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 142/279 (50%), Gaps = 8/279 (2%)
Query: 285 EAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNT 344
EA+E F + S K L +++ C SL GR+IH +++ + + D +L+N
Sbjct: 49 EALEAFDFAQ-KNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNH 107
Query: 345 LLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKP 404
+L MY CG+ RDAR VF+ MP + +VS+TS+I GY + G E RL+ KM E L P
Sbjct: 108 ILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQ-GAEAIRLYLKMLQEDLVP 166
Query: 405 TAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVF 464
+ SI+ AC + G+++H +++ + NA+I MYV+ ++ A VF
Sbjct: 167 DQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVF 226
Query: 465 GEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMF 524
+ KD ISWS +I G S G + +++ ++ I+ ++L ACS+
Sbjct: 227 YGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRP 286
Query: 525 EEGR----VCF-NHIRGPMIAHCAQKVSLLARCGLFDEA 558
+ G +C + + G IA C+ + ARCG + A
Sbjct: 287 DYGSQIHGLCIKSELAGNAIAGCSL-CDMYARCGFLNSA 324
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 258 bits (660), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 153/480 (31%), Positives = 247/480 (51%), Gaps = 16/480 (3%)
Query: 224 HLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGEL 283
H VK GL+ + F NSL+ Y G A +F+ KDVV+WT+MI G V+NG
Sbjct: 126 HAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSA 185
Query: 284 SEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHG-YLVRNGVECDVLLS 342
SEAM F M G V + + V +VL G + ++ GR +HG YL V+CDV +
Sbjct: 186 SEAMVYFVEMKKTG--VAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIG 243
Query: 343 NTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGL 402
++L+ MY C DA+ VF++MPS+ VV+WT++I GYV+ F+ + +F +M +
Sbjct: 244 SSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGML-VFEEMLKSDV 302
Query: 403 KPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALN 462
P ++SS+L AC + + GR +H Y+++N +E + +ID+YVK G + A+
Sbjct: 303 APNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAIL 362
Query: 463 VFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTAR 522
VF ++EK+ +W+ MI G + HG + DLF + + +P ++ + A L AC+
Sbjct: 363 VFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSP-NEVTFMAVLSACAHGG 421
Query: 523 MFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKL 577
+ EEGR F ++G P H A V L R GL +EA I +E V L
Sbjct: 422 LVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGAL 481
Query: 578 LEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLK 637
C +H +Y LGK ++ +L+P ++ Y LL N ++ D V ++R+ ++++ +
Sbjct: 482 FGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVV 541
Query: 638 PKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEE 697
+W + K+ F D P + + + + T GV+ + L DV E
Sbjct: 542 KSPGFSWIEVKGKLCEFIAFDDKKPLESD------DLYKTLDTVGVQMRLPDELEDVTAE 595
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 174/386 (45%), Gaps = 30/386 (7%)
Query: 121 QLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEG 180
Q H H VK L S +LI Y+S A LFD WT + +V G
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 181 MPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLG-LEGEVFAS 239
A+ F M + +R GR VH + ++ G ++ +VF
Sbjct: 184 SASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIG 243
Query: 240 NSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLS 299
+SL+ MY C DA+ VF++MP ++VV+WT++I G VQ+ + M +F M
Sbjct: 244 SSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKS--D 301
Query: 300 VKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDAR 359
V P+ +S+VL C +G+L GR +H Y+++N +E + TL+ +Y CG +A
Sbjct: 302 VAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAI 361
Query: 360 LVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRI 419
LVFE++ K V +WT+MI G+ G+ + F LF M S + P V+ ++L AC
Sbjct: 362 LVFERLHEKNVYTWTAMINGFAAH-GYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA-- 418
Query: 420 ASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMN----------- 468
HG L+ G +++ +M K+ AC +++FG
Sbjct: 419 ---------HGGLVEEGRRLFLSMKGR-FNMEPKADHYACMVDLFGRKGLLEEAKALIER 468
Query: 469 ---EKDTISWSMMIFGCSLHGQGKLG 491
E + W + C LH +LG
Sbjct: 469 MPMEPTNVVWGALFGSCLLHKDYELG 494
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 171/362 (47%), Gaps = 21/362 (5%)
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
++F S L + R AR + ++ + W S+I G S + L RR++
Sbjct: 35 DLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLI------GHFSGGITLNRRLS 88
Query: 295 -LEGLSVKPDLVMVS--TVLPVCGMIGSLKHGR--EIHGYLVRNGVECDVLLSNTLLKMY 349
L ++ + V+ S T P+ + L+ + H ++V+ G++ D + N+L+ Y
Sbjct: 89 FLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGY 148
Query: 350 ADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSI 409
+ G A +F+ K VV+WT+MI G+V+ G +E F +M G+ +++
Sbjct: 149 SSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGS-ASEAMVYFVEMKKTGVAANEMTV 207
Query: 410 SSILPACGRIASHKHGREIHGYLLRNG-VEFDINVSNAVIDMYVKSGAIACALNVFGEMN 468
S+L A G++ + GR +HG L G V+ D+ + ++++DMY K A VF EM
Sbjct: 208 VSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP 267
Query: 469 EKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGR 528
++ ++W+ +I G G+ +F ++ ++ AP ++ ++ L AC+ GR
Sbjct: 268 SRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAP-NEKTLSSVLSACAHVGALHRGR 326
Query: 529 V--CF---NHIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRI 583
C+ N I A + L +CG +EA + + E+ E++ ++ G
Sbjct: 327 RVHCYMIKNSIEINTTAGTTL-IDLYVKCGCLEEA-ILVFERLHEKNVYTWTAMINGFAA 384
Query: 584 HG 585
HG
Sbjct: 385 HG 386
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 138/329 (41%), Gaps = 11/329 (3%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
++FD + + D + W +I + N A+ F +M + V A+
Sbjct: 159 RLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVE 218
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLI--ALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFL 172
D G+ +H ++ + I +L+ +Y AQ +FD+ WT L
Sbjct: 219 DVRFGRSVHGLYLETG-RVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTAL 277
Query: 173 AKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL 232
YV + +F M+ +G+L +GR VH +K +
Sbjct: 278 IAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSI 337
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
E A +L+ +YV CG + +A LVFE++ K+V +WT+MI G +G +A +LF
Sbjct: 338 EINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYT 397
Query: 293 MNLEGLS--VKPDLVMVSTVLPVCGMIGSLKHGREIHGYLV-RNGVECDVLLSNTLLKMY 349
M LS V P+ V VL C G ++ GR + + R +E ++ ++
Sbjct: 398 M----LSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLF 453
Query: 350 ADCGASRDARLVFEQMP-SKTVVSWTSMI 377
G +A+ + E+MP T V W ++
Sbjct: 454 GRKGLLEEAKALIERMPMEPTNVVWGALF 482
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 258 bits (660), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 193/693 (27%), Positives = 330/693 (47%), Gaps = 64/693 (9%)
Query: 119 GKQLHTHAVKLALSSRAHTLIA--LIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLY 176
G LH H + + ++A LI++YA +I A+ +FD WT L Y
Sbjct: 78 GINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGY 137
Query: 177 VLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLR--QGRDVHLIAVKLGLEG 234
V G + LF M+ ++ S R G+ VH +A+KLGL
Sbjct: 138 VQAGNEQEGFCLFSSMLSHCFPNEFTLSS-------VLTSCRYEPGKQVHGLALKLGLHC 190
Query: 235 EVFASNSLLKMYVDC---GSMRDARLVFEKMPCKDVVSWTSMIRG--CVQNGELSEAMEL 289
++ +N+++ MY C + +A VFE + K++V+W SMI C G+ +A+ +
Sbjct: 191 SIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGK--KAIGV 248
Query: 290 FRRMNLEGLSVKPDLVMVSTVLPVCGMIGSL---------KHGREIHGYLVRNGVECDVL 340
F RM+ +G+ +T+L +C + K ++H V++G+
Sbjct: 249 FMRMHSDGVGFDR-----ATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTE 303
Query: 341 LSNTLLKMYA-------DCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRL 393
++ L+K+Y+ DC +L E + +V+W +I + L
Sbjct: 304 VATALIKVYSEMLEDYTDC-----YKLFMEMSHCRDIVAWNGIITAFAVYDP--ERAIHL 356
Query: 394 FRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVK 453
F ++ E L P + SS+L AC + + +H IH +++ G D ++N++I Y K
Sbjct: 357 FGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAK 416
Query: 454 SGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAA 513
G++ + VF +M+ +D +SW+ M+ SLHGQ + +F++++ N D + A
Sbjct: 417 CGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINP----DSATFIA 472
Query: 514 ALHACSTARMFEEGRVCFNHI-----RGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIE 568
L ACS A EEG F + P + H A + +L+R F EA I++ ++
Sbjct: 473 LLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMD 532
Query: 569 QHPEVLRKLLEGCRIHGEYALGKQVIEQLCEL-EPLNAENYVLLLNWHAGKGKLDMVDKI 627
V LL CR HG LGK ++L EL EP N+ +Y+ + N + +G + +
Sbjct: 533 PDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLS 592
Query: 628 RETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKW 687
+ + ++ + +WT KVH F +G P K+ + L+ + ++ G P+
Sbjct: 593 IKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPEM 652
Query: 688 DFS--LHDVDEERECTQIEHSELLALAFGLI----SSQAGP--IRLEKNSRVCRGCHDFA 739
+ + +E+ E + HSE LALAF ++ SS G I++ KN+R+C CH+F
Sbjct: 653 RSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICIDCHNFM 712
Query: 740 KFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
K SK+ G+EI+++D N FHHFK C+C D+W
Sbjct: 713 KLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 254 bits (649), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 165/596 (27%), Positives = 279/596 (46%), Gaps = 15/596 (2%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA- 113
++F++ P+ L++N +I ++ + AIS F +M+ V A
Sbjct: 70 KLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGE 129
Query: 114 -ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFL 172
LG +H ++ + AL+ +Y + + +A+ +FD W +
Sbjct: 130 LKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTM 189
Query: 173 AKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL 232
Y G AL +F MV + L GR+VH + + L
Sbjct: 190 ISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRL 249
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
++ N+L+ MY+ CG M +AR VF++M +DV++WT MI G ++G++ A+EL R
Sbjct: 250 GDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRL 309
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADC 352
M EG V+P+ V +++++ VCG + G+ +HG+ VR V D+++ +L+ MYA C
Sbjct: 310 MQFEG--VRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKC 367
Query: 353 GASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSI 412
VF W+++I G V+ ++ LF++M E ++P +++S+
Sbjct: 368 KRVDLCFRVFSGASKYHTGPWSAIIAGCVQN-ELVSDALGLFKRMRREDVEPNIATLNSL 426
Query: 413 LPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNE--- 469
LPA +A + IH YL + G ++ + ++ +Y K G + A +F + E
Sbjct: 427 LPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHK 486
Query: 470 -KDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEG- 527
KD + W +I G +HG G + +F ++ R+ P ++ + +AL+ACS + + EEG
Sbjct: 487 SKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTP-NEITFTSALNACSHSGLVEEGL 545
Query: 528 ---RVCFNHIRGPMIA-HCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRI 583
R H + + H V LL R G DEA I E V LL C
Sbjct: 546 TLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVT 605
Query: 584 HGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPK 639
H LG+ +L ELEP N NYVLL N +A G+ ++K+R + GL+ K
Sbjct: 606 HENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKK 661
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/422 (29%), Positives = 201/422 (47%), Gaps = 8/422 (1%)
Query: 88 FTQMLRHAVXXXXXXXXXXXXASRLAADFSLGKQ--LHTHAVKLALSSRAHTLIALIHLY 145
+++LR A + AA S+ K LH H + S H L L Y
Sbjct: 1 MSEVLRRANNALSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVS-GHILSTLSVTY 59
Query: 146 ASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXX 205
A I A+ LF++ + + ++YV EG+ A+ +F RMV
Sbjct: 60 ALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYT 119
Query: 206 XXXXXXXM--MGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMP 263
+ S++ G VH ++ + + N+LL MY++ G + AR VF+ M
Sbjct: 120 YPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMK 179
Query: 264 CKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHG 323
+DV+SW +MI G +NG +++A+ +F M E SV D + ++LPVCG + L+ G
Sbjct: 180 NRDVISWNTMISGYYRNGYMNDALMMFDWMVNE--SVDLDHATIVSMLPVCGHLKDLEMG 237
Query: 324 REIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKK 383
R +H + + + + N L+ MY CG +AR VF++M + V++WT MI GY +
Sbjct: 238 RNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTED 297
Query: 384 GGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINV 443
G N L R M EG++P AV+I+S++ CG G+ +HG+ +R V DI +
Sbjct: 298 GDVEN-ALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIII 356
Query: 444 SNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSE 503
++I MY K + VF ++ T WS +I GC + + LF+++ R
Sbjct: 357 ETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDV 416
Query: 504 AP 505
P
Sbjct: 417 EP 418
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 213/493 (43%), Gaps = 67/493 (13%)
Query: 240 NSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLS 299
++L Y CG + AR +FE+MP ++S+ +IR V+ G +A+ +F RM EG+
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK 112
Query: 300 VKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDAR 359
PD V G + S+K G +HG ++R+ D + N LL MY + G AR
Sbjct: 113 CVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMAR 172
Query: 360 LVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRI 419
VF+ M ++ V+SW +MI GY + G+ N+ +F M +E + +I S+LP CG +
Sbjct: 173 DVFDVMKNRDVISWNTMISGYYRN-GYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHL 231
Query: 420 ASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMI 479
+ GR +H + + I V NA+++MY+K G + A VF M +D I+W+ MI
Sbjct: 232 KDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMI 291
Query: 480 FGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGR----------- 528
G + G + ++L R ++ P I A+ + C A +G+
Sbjct: 292 NGYTEDGDVENALELCRLMQFEGVRPNAVTI-ASLVSVCGDALKVNDGKCLHGWAVRQQV 350
Query: 529 ---------------------VCFNHIRG----------PMIAHCAQKVSLLARCGLFDE 557
+CF G +IA C Q + GLF
Sbjct: 351 YSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKR 410
Query: 558 AMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPL----NAENYVLLLN 613
+R + +E + L LL + A +Q + C L + + L++
Sbjct: 411 ----MRREDVEPNIATLNSLLPA---YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVH 463
Query: 614 WHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQG 673
++ G L+ KI I+E+ K K W + G G +ALQ
Sbjct: 464 VYSKCGTLESAHKIFNGIQEKH-KSKDVVLWGALISGYGMHGDGH----------NALQV 512
Query: 674 FMEEMRTEGVEPK 686
FME +R+ GV P
Sbjct: 513 FMEMVRS-GVTPN 524
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 253 bits (645), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 178/638 (27%), Positives = 299/638 (46%), Gaps = 18/638 (2%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
+ +FD+ P+ D+++WNT+I + S A FT M R
Sbjct: 55 NMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASV 114
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
F LG+Q+H +K + +L+ +YA + + A F + + S W L
Sbjct: 115 KRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALI 174
Query: 174 KLYVLEGMPRSALELFHRM---VXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKL 230
+V ++A L M M +L + VH +KL
Sbjct: 175 AGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLL--KQVHAKVLKL 232
Query: 231 GLEGEVFASNSLLKMYVDCGSMRDARLVFEKMP-CKDVVSWTSMIRGCVQNGELSEAMEL 289
GL+ E+ N+++ Y DCGS+ DA+ VF+ + KD++SW SMI G ++ A EL
Sbjct: 233 GLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFEL 292
Query: 290 FRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMY 349
F +M V+ D+ + +L C G+ +HG +++ G+E +N L+ MY
Sbjct: 293 FIQMQRHW--VETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMY 350
Query: 350 AD--CGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAV 407
G DA +FE + SK ++SW S+I G+ +KG + + + F + S +K
Sbjct: 351 IQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKG-LSEDAVKFFSYLRSSEIKVDDY 409
Query: 408 SISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEM 467
+ S++L +C +A+ + G++IH ++G + V +++I MY K G I A F ++
Sbjct: 410 AFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQI 469
Query: 468 NEK-DTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEE 526
+ K T++W+ MI G + HG G++ +DLF Q+ N LD + A L ACS + +E
Sbjct: 470 SSKHSTVAWNAMILGYAQHGLGQVSLDLFSQM-CNQNVKLDHVTFTAILTACSHTGLIQE 528
Query: 527 GRVCFNHIR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGC 581
G N + P + H A V LL R GL ++A I + P VL+ L C
Sbjct: 529 GLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVC 588
Query: 582 RIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKA 641
R GE + QV L E+EP + YV L + ++ K + +++ ++ERG+K
Sbjct: 589 RACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPG 648
Query: 642 CTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMR 679
+W R +V F D S+P ++I ++ +EM+
Sbjct: 649 WSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 155 bits (393), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 116/489 (23%), Positives = 222/489 (45%), Gaps = 22/489 (4%)
Query: 123 HTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMP 182
H +A+K S + ++ Y + A LFD+ S W + Y G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 183 RSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSL 242
A LF M + G VH + +K G E V+ +SL
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 243 LKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEA------MELFRRMNLE 296
+ MY C + DA F+++ + VSW ++I G VQ ++ A ME+ + ++
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 297 GLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASR 356
+ P L ++ + C ++ +++H +++ G++ ++ + N ++ YADCG+
Sbjct: 203 AGTFAPLLTLLDDPM-FCNLL------KQVHAKVLKLGLQHEITICNAMISSYADCGSVS 255
Query: 357 DARLVFEQM-PSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPA 415
DA+ VF+ + SK ++SW SMI G+ K F LF +M ++ + + +L A
Sbjct: 256 DAKRVFDGLGGSKDLISWNSMIAGF-SKHELKESAFELFIQMQRHWVETDIYTYTGLLSA 314
Query: 416 CGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVK--SGAIACALNVFGEMNEKDTI 473
C G+ +HG +++ G+E + +NA+I MY++ +G + AL++F + KD I
Sbjct: 315 CSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLI 374
Query: 474 SWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEG-RVCFN 532
SW+ +I G + G + V F L R+SE +DD ++A L +CS + G ++
Sbjct: 375 SWNSIITGFAQKGLSEDAVKFFSYL-RSSEIKVDDYAFSALLRSCSDLATLQLGQQIHAL 433
Query: 533 HIRGPMIAH---CAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYAL 589
+ +++ + + + ++CG+ + A ++ + ++ G HG +
Sbjct: 434 ATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQV 493
Query: 590 GKQVIEQLC 598
+ Q+C
Sbjct: 494 SLDLFSQMC 502
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 252 bits (644), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 149/430 (34%), Positives = 240/430 (55%), Gaps = 18/430 (4%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDV--VSWTSM 273
++ G VH + L + S+ L+++Y CG A VF++M +D +W S+
Sbjct: 107 AIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSL 166
Query: 274 IRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN 333
I G + G+ +AM L+ +M +G VKPD VL CG IGS++ G IH LV+
Sbjct: 167 ISGYAELGQYEDAMALYFQMAEDG--VKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKE 224
Query: 334 GVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRL 393
G DV + N L+ MYA CG AR VF+ +P K VSW SM+ GY+ G +E +
Sbjct: 225 GFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHG-LLHEALDI 283
Query: 394 FRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVK 453
FR M G++P V+ISS+L R+ S KHGR++HG+++R G+E++++V+NA+I +Y K
Sbjct: 284 FRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSK 340
Query: 454 SGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAA 513
G + A +F +M E+DT+SW+ +I S H + G+ F Q+ R + P D + +
Sbjct: 341 RGQLGQACFIFDQMLERDTVSWNAII---SAHSKNSNGLKYFEQMHRANAKP-DGITFVS 396
Query: 514 ALHACSTARMFEEGRVCFNHIR-----GPMIAHCAQKVSLLARCGLFDEAM-VFIREQKI 567
L C+ M E+G F+ + P + H A V+L R G+ +EA + ++E +
Sbjct: 397 VLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGL 456
Query: 568 EQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKI 627
E P V LL C +HG +G+ ++L ELEP N N+ LL+ ++ + + V+++
Sbjct: 457 EAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERV 516
Query: 628 RETIRERGLK 637
R+ + +RGL+
Sbjct: 517 RQMMVDRGLE 526
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 180/359 (50%), Gaps = 20/359 (5%)
Query: 141 LIHLYASLDDIAVAQTLFDK-----TAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXX 195
L+ LYAS VA +FD+ ++PF W L Y G A+ L+ +M
Sbjct: 133 LVRLYASCGYAEVAHEVFDRMSKRDSSPF---AWNSLISGYAELGQYEDAMALYFQMAED 189
Query: 196 XXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDA 255
+GS++ G +H VK G +V+ N+L+ MY CG + A
Sbjct: 190 GVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKA 249
Query: 256 RLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCG 315
R VF+ +P KD VSW SM+ G + +G L EA+++FR M G ++PD V +S+VL
Sbjct: 250 RNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNG--IEPDKVAISSVL---A 304
Query: 316 MIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTS 375
+ S KHGR++HG+++R G+E ++ ++N L+ +Y+ G A +F+QM + VSW +
Sbjct: 305 RVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNA 364
Query: 376 MIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRN 435
+I + K N+ + F +M+ KP ++ S+L C + G + + +
Sbjct: 365 IISAHSK----NSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKE 420
Query: 436 -GVEFDINVSNAVIDMYVKSGAIACALN-VFGEMN-EKDTISWSMMIFGCSLHGQGKLG 491
G++ + ++++Y ++G + A + + EM E W +++ C LHG +G
Sbjct: 421 YGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIG 479
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 180/358 (50%), Gaps = 30/358 (8%)
Query: 306 MVSTVLPVCGMIGSLKHGREIH----GYLVRNGVECDVLLSNTLLKMYADCGASRDARLV 361
+ +++L C + ++ HG +H YL+RN ++ +S+ L+++YA CG + A V
Sbjct: 94 IFASLLETCYSLRAIDHGVRVHHLIPPYLLRN----NLGISSKLVRLYASCGYAEVAHEV 149
Query: 362 FEQMPSK--TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRI 419
F++M + + +W S+I GY + G + + L+ +M +G+KP + +L ACG I
Sbjct: 150 FDRMSKRDSSPFAWNSLISGYAELGQYE-DAMALYFQMAEDGVKPDRFTFPRVLKACGGI 208
Query: 420 ASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMI 479
S + G IH L++ G +D+ V NA++ MY K G I A NVF + KD +SW+ M+
Sbjct: 209 GSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSML 268
Query: 480 FGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNH-IRGPM 538
G HG +D+FR + +N P D + +++ A + F+ GR IR M
Sbjct: 269 TGYLHHGLLHEALDIFRLMVQNGIEP--DKVAISSVLARVLS--FKHGRQLHGWVIRRGM 324
Query: 539 ---IAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIE 595
++ + L ++ G +A FI +Q +E+ ++ H + + G + E
Sbjct: 325 EWELSVANALIVLYSKRGQLGQA-CFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFE 380
Query: 596 QL--CELEPLNAENYVLLLNWHAGKGKLDMVDKIRETI-RERGLKPK---KACTWTLY 647
Q+ +P + +V +L+ A G ++ +++ + +E G+ PK AC LY
Sbjct: 381 QMHRANAKP-DGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLY 437
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 138/316 (43%), Gaps = 12/316 (3%)
Query: 54 HQVFDKSPEWDT--LAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASR 111
H+VFD+ + D+ AWN+LI + + A++ + QM V A
Sbjct: 147 HEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACG 206
Query: 112 LAADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTF 171
+G+ +H VK + L AL+ +YA DI A+ +FD W
Sbjct: 207 GIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNS 266
Query: 172 LAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLG 231
+ Y+ G+ AL++F MV S + GR +H ++ G
Sbjct: 267 MLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVL---SFKHGRQLHGWVIRRG 323
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFR 291
+E E+ +N+L+ +Y G + A +F++M +D VSW ++I +N S ++ F
Sbjct: 324 MEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKN---SNGLKYFE 380
Query: 292 RMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN-GVECDVLLSNTLLKMYA 350
+M+ + KPD + +VL +C G ++ G + + + G++ + ++ +Y
Sbjct: 381 QMHRA--NAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYG 438
Query: 351 DCGASRDA-RLVFEQM 365
G +A ++ ++M
Sbjct: 439 RAGMMEEAYSMIVQEM 454
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 252 bits (644), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 167/550 (30%), Positives = 263/550 (47%), Gaps = 50/550 (9%)
Query: 270 WTSMIRGCVQN---GELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREI 326
W +IR V N + + ++ RM V PD +LP L G+
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRM--RNHRVSPDFHTFPFLLPSFHNPLHLPLGQRT 84
Query: 327 HGYLVRNGVECDVLLSNTLLKMYADCGASR------------------------------ 356
H ++ G++ D + +LL MY+ CG R
Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144
Query: 357 -DARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKM-----NSEGLKPTAVSIS 410
DAR +F++MP + V+SW+ +I GYV G + E LFR+M N ++P ++S
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYVMCGKYK-EALDLFREMQLPKPNEAFVRPNEFTMS 203
Query: 411 SILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEM-NE 469
++L ACGR+ + + G+ +H Y+ + VE DI + A+IDMY K G++ A VF + ++
Sbjct: 204 TVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK 263
Query: 470 KDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRV 529
KD ++S MI +++G LF ++ + + + L AC + EG+
Sbjct: 264 KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKS 323
Query: 530 CFNHIR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIH 584
F + P I H V L R GL EA FI +E + LL G R+
Sbjct: 324 YFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRML 383
Query: 585 GEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTW 644
G+ + +++L EL+P+N+ YVLL N +A G+ V IR + +G+ C++
Sbjct: 384 GDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSY 443
Query: 645 TLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDE-ERECTQI 703
VH F GD S + I + L M+ +R G L D++E ++E
Sbjct: 444 VEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALS 503
Query: 704 EHSELLALAFGLISSQAG-PIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFK 762
HSE LA+AF L+ ++ G P+R+ KN R+C CH K +SK+ REI+++D N FHHF+
Sbjct: 504 YHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFR 563
Query: 763 HGHCTCEDFW 772
G C+C DFW
Sbjct: 564 DGSCSCRDFW 573
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 148/310 (47%), Gaps = 37/310 (11%)
Query: 217 LRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMR----------------------- 253
L G+ H + GL+ + F SLL MY CG +R
Sbjct: 78 LPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNA 137
Query: 254 --------DARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLS---VKP 302
DAR +F++MP ++V+SW+ +I G V G+ EA++LFR M L + V+P
Sbjct: 138 YAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP 197
Query: 303 DLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVF 362
+ +STVL CG +G+L+ G+ +H Y+ + VE D++L L+ MYA CG+ A+ VF
Sbjct: 198 NEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVF 257
Query: 363 EQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKM-NSEGLKPTAVSISSILPACGRIAS 421
+ SK V S + + G +E F+LF +M S+ + P +V+ IL AC
Sbjct: 258 NALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGL 317
Query: 422 HKHGREIHGYLLRN-GVEFDINVSNAVIDMYVKSGAIACALNVFGEMN-EKDTISWSMMI 479
G+ ++ G+ I ++D+Y +SG I A + M E D + W ++
Sbjct: 318 INEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLL 377
Query: 480 FGCSLHGQGK 489
G + G K
Sbjct: 378 SGSRMLGDIK 387
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 155/413 (37%), Gaps = 47/413 (11%)
Query: 64 DTLAWNTLIHTHLSNNHFPL---AISTFTQMLRHAVXXXXXXXXXXXXASRLAADFSLGK 120
++ WN +I + N P IS + +M H V + LG+
Sbjct: 23 ESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 121 QLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFD----KTAPFGSDC-------- 168
+ H + L +L+++Y+S D+ AQ +FD K P +
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 169 -------------------WTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXX 209
W+ L YV+ G + AL+LF M
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 210 XXXM-----MGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPC 264
+ +G+L QG+ VH K +E ++ +L+ MY CGS+ A+ VF +
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 265 -KDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHG 323
KDV ++++MI G E +LF M ++ P+ V +L C G + G
Sbjct: 263 KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSD-NINPNSVTFVGILGACVHRGLINEG 321
Query: 324 REIHGYLVRN-GVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKT-VVSWTSMIRGYV 381
+ ++ G+ + ++ +Y G ++A MP + V+ W S++ G
Sbjct: 322 KSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSR 381
Query: 382 KKGGFNNEVFRLFRKMNSEGLKPTA-VSISSILPACGR---IASHKHGREIHG 430
G L R + + + A V +S++ GR + +H E+ G
Sbjct: 382 MLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKG 434
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 250 bits (639), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 166/595 (27%), Positives = 294/595 (49%), Gaps = 48/595 (8%)
Query: 223 VHLIAVKLGLEGEVFASNSLLKMYVDCGSMRD-------ARLVFEKMPCKDVVSWTSMIR 275
+H ++ L +VF ++ LL + VD + A +F ++ ++ + +IR
Sbjct: 31 IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIR 90
Query: 276 GCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGV 335
E S+A + +M + PD + ++ + + G + H +VR G
Sbjct: 91 CFSTGAEPSKAFGFYTQMLKS--RIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGF 148
Query: 336 ECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNN--EVFR- 392
+ DV + N+L+ MYA+CG A +F QM + VVSWTSM+ GY K G N E+F
Sbjct: 149 QNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDE 208
Query: 393 ---------------------------LFRKMNSEGLKPTAVSISSILPACGRIASHKHG 425
LF M EG+ + S++ +C + + + G
Sbjct: 209 MPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFG 268
Query: 426 REIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLH 485
+ Y++++ + ++ + A++DM+ + G I A++VF + E D++SWS +I G ++H
Sbjct: 269 ERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVH 328
Query: 486 GQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG-----PMIA 540
G + F Q+ P D + A L ACS + E+G + +++ P +
Sbjct: 329 GHAHKAMHYFSQMISLGFIP-RDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLE 387
Query: 541 HCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCEL 600
H V +L R G EA FI + ++ + +L LL C+I+ + ++V L ++
Sbjct: 388 HYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKV 447
Query: 601 EPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGD-V 659
+P ++ YVLL N +A G+ D ++ +R+ ++E+ +K + K++ F GD
Sbjct: 448 KPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQ 507
Query: 660 SHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEERECTQIE-HSELLALAFGLISS 718
HP +I + + ++R G + + DVDEE + + I HSE LA+A+G++ +
Sbjct: 508 KHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKT 567
Query: 719 QAGP-IRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
+ G IR+ KN RVC CH K +S+V GRE+I++D N FHHF++G C+C D+W
Sbjct: 568 KPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 156/333 (46%), Gaps = 41/333 (12%)
Query: 220 GRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTS------- 272
G H V+ G + +V+ NSL+ MY +CG + A +F +M +DVVSWTS
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 273 ------------------------MIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVS 308
MI G +N +A++LF M EG+ V + VMVS
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGV-VANETVMVS 254
Query: 309 TVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK 368
V+ C +G+L+ G + Y+V++ + +++L L+ M+ CG A VFE +P
Sbjct: 255 -VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPET 313
Query: 369 TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREI 428
+SW+S+I+G + G ++ F +M S G P V+ +++L AC + G EI
Sbjct: 314 DSLSWSSIIKG-LAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEI 372
Query: 429 HGYLLRN-GVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFG-CSLHG 486
+ + ++ G+E + ++DM ++G +A A N +M+ K + G C ++
Sbjct: 373 YENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYK 432
Query: 487 QGKLGVDLFRQL-----ERNSEAPLDDNIYAAA 514
++ + L E + L NIYA A
Sbjct: 433 NTEVAERVGNMLIKVKPEHSGYYVLLSNIYACA 465
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 120/315 (38%), Gaps = 34/315 (10%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
+ +F + + +N LI + A +TQML+ + AS
Sbjct: 71 YGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEM 130
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
+G+Q H+ V+ + + +L+H+YA+ IA A +F + WT +
Sbjct: 131 ECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMV 190
Query: 174 KLYVLEGMPRSALELF----HR---------------------------MVXXXXXXXXX 202
Y GM +A E+F HR M
Sbjct: 191 AGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANET 250
Query: 203 XXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKM 262
+G+L G + VK + + +L+ M+ CG + A VFE +
Sbjct: 251 VMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGL 310
Query: 263 PCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKH 322
P D +SW+S+I+G +G +AM F +M L P V + VL C G ++
Sbjct: 311 PETDSLSWSSIIKGLAVHGHAHKAMHYFSQM--ISLGFIPRDVTFTAVLSACSHGGLVEK 368
Query: 323 GREIHGYLVRN-GVE 336
G EI+ + ++ G+E
Sbjct: 369 GLEIYENMKKDHGIE 383
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 248 bits (632), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 164/501 (32%), Positives = 248/501 (49%), Gaps = 46/501 (9%)
Query: 214 MGSLR---QGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSW 270
+G LR +G VH AVK GLE + + SNSL+ MY G + VF++MP +DVVSW
Sbjct: 56 IGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSW 115
Query: 271 TSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYL 330
+I V NG +A+ +F+RM+ E ++K D + + L C + +L+ G I+ ++
Sbjct: 116 NGLISSYVGNGRFEDAIGVFKRMSQES-NLKFDEGTIVSTLSACSALKNLEIGERIYRFV 174
Query: 331 VRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKG------ 384
V E V + N L+ M+ CG AR VF+ M K V WTSM+ GYV G
Sbjct: 175 VTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEAR 233
Query: 385 ----------------------GFN--NEVFRLFRKMNSEGLKPTAVSISSILPACGRIA 420
FN +E LFR M + G++P + S+L C +
Sbjct: 234 VLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTG 293
Query: 421 SHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIF 480
+ + G+ IHGY+ N V D V A++DMY K G I AL VF E+ E+DT SW+ +I+
Sbjct: 294 ALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIY 353
Query: 481 GCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFN-----HIR 535
G +++G +DL+ ++E N LD + A L AC+ EGR F+ H
Sbjct: 354 GLAMNGMSGRALDLYYEME-NVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNV 412
Query: 536 GPMIAHCAQKVSLLARCGLFDEAMVFI---REQKIEQHPEVLRKLLEGCRIHGEYALGKQ 592
P HC+ + LL R GL DEA I R + E V LL R +G + ++
Sbjct: 413 QPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAER 472
Query: 593 VIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVH 652
V E+L ++E ++ + LL + +A + + V +R +++ G++ C+ H
Sbjct: 473 VAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGH 532
Query: 653 VFGTGD--VSHPRKKEICSAL 671
F GD +SHP+ EI S L
Sbjct: 533 EFIVGDDLLSHPKMDEINSML 553
Score = 150 bits (379), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 197/438 (44%), Gaps = 46/438 (10%)
Query: 119 GKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVL 178
G+++H +AVK L ++ +L+ +YASL I + +FD+ W L YV
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 179 EGMPRSALELFHRMVXXXXXXXXXXXXXXXXXX-XMMGSLRQGRDVHLIAVKLGLEGEVF 237
G A+ +F RM + +L G ++ V E V
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFEMSVR 183
Query: 238 ASNSLLKMYVDCG----------SMRD---------------------ARLVFEKMPCKD 266
N+L+ M+ CG SMRD AR++FE+ P KD
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKD 243
Query: 267 VVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREI 326
VV WT+M+ G VQ EA+ELFR M G ++PD ++ ++L C G+L+ G+ I
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALELFRCMQTAG--IRPDNFVLVSLLTGCAQTGALEQGKWI 301
Query: 327 HGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGF 386
HGY+ N V D ++ L+ MYA CG A VF ++ + SWTS+I G + G
Sbjct: 302 HGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYG-LAMNGM 360
Query: 387 NNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREI-HGYLLRNGVEFDINVSN 445
+ L+ +M + G++ A++ ++L AC GR+I H R+ V+ +
Sbjct: 361 SGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCS 420
Query: 446 AVIDMYVKSGAIACALNVF----GEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLER- 500
+ID+ ++G + A + GE +E + ++ +G K+ + +LE+
Sbjct: 421 CLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKV 480
Query: 501 ----NSEAPLDDNIYAAA 514
+S L ++YA+A
Sbjct: 481 EVSDSSAHTLLASVYASA 498
Score = 119 bits (299), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 148/328 (45%), Gaps = 44/328 (13%)
Query: 270 WTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGY 329
+ M++ ++ + LF + +GL PD + VL G + + G ++HGY
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLY--PDNFTLPVVLKSIGRLRKVIEGEKVHGY 71
Query: 330 LVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNE 389
V+ G+E D +SN+L+ MYA G VF++MP + VVSW +I YV G F +
Sbjct: 72 AVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDA 131
Query: 390 VFRLFRKMNSE-GLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVI 448
+ +F++M+ E LK +I S L AC + + + G I+ +++ E + + NA++
Sbjct: 132 I-GVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNALV 189
Query: 449 DMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDD 508
DM+ K G + A VF M +K+ W+ M+FG G+ +D R L S P+ D
Sbjct: 190 DMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGR----IDEARVLFERS--PVKD 243
Query: 509 NIYAAALHACSTARMFEEGRVCFNHIRGPMIAHCAQKVSLLARCGLFDEAMVFIR-EQKI 567
+ A+ G V FN FDEA+ R Q
Sbjct: 244 VVLWTAMM---------NGYVQFNR---------------------FDEALELFRCMQTA 273
Query: 568 EQHPE--VLRKLLEGCRIHGEYALGKQV 593
P+ VL LL GC G GK +
Sbjct: 274 GIRPDNFVLVSLLTGCAQTGALEQGKWI 301
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 97/198 (48%), Gaps = 6/198 (3%)
Query: 364 QMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHK 423
Q PS ++ + M++ F +V LF ++ +GL P ++ +L + GR+
Sbjct: 7 QTPS--LLMYNKMLKSLADGKSFT-KVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVI 63
Query: 424 HGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCS 483
G ++HGY ++ G+EFD VSN+++ MY G I VF EM ++D +SW+ +I
Sbjct: 64 EGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYV 123
Query: 484 LHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHI--RGPMIAH 541
+G+ + + +F+++ + S D+ + L ACS + E G + + M
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVR 183
Query: 542 CAQK-VSLLARCGLFDEA 558
V + +CG D+A
Sbjct: 184 IGNALVDMFCKCGCLDKA 201
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 141/350 (40%), Gaps = 38/350 (10%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHA-VXXXXXXXXXXXXASRL 112
H+VFD+ P+ D ++WN LI +++ N F AI F +M + + + A
Sbjct: 101 HKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSA 160
Query: 113 AADFSLGKQLHTHAV-KLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTF 171
+ +G++++ V + +S R AL+ ++ + A+ +FD CWT
Sbjct: 161 LKNLEIGERIYRFVVTEFEMSVRIGN--ALVDMFCKCGCLDKARAVFDSMRDKNVKCWTS 218
Query: 172 LAKLYVLEG--------MPRS-----------------------ALELFHRMVXXXXXXX 200
+ YV G RS ALELF M
Sbjct: 219 MVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPD 278
Query: 201 XXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFE 260
G+L QG+ +H + + + +L+ MY CG + A VF
Sbjct: 279 NFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFY 338
Query: 261 KMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSL 320
++ +D SWTS+I G NG A++L+ M E + V+ D + VL C G +
Sbjct: 339 EIKERDTASWTSLIYGLAMNGMSGRALDLYYEM--ENVGVRLDAITFVAVLTACNHGGFV 396
Query: 321 KHGREI-HGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKT 369
GR+I H R+ V+ + L+ + G +A + ++M ++
Sbjct: 397 AEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGES 446
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 248 bits (632), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 170/600 (28%), Positives = 277/600 (46%), Gaps = 12/600 (2%)
Query: 55 QVFDK--SPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRL 112
VFD+ P + +AW+ +I + SN+ A+ + +ML V A
Sbjct: 56 HVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAG 115
Query: 113 AADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFL 172
GK +H+H ++ + AL+ YA ++ +A +FD+ W +
Sbjct: 116 LRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAM 175
Query: 173 AKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXX-MMGSLRQGRDVHLIAVKLG 231
+ L + LF M G+LR+G+ VH ++G
Sbjct: 176 ISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMG 235
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFR 291
++ +L +Y + AR VF+ K+ V+W++MI G V+N + EA E+F
Sbjct: 236 FSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFF 295
Query: 292 RMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYAD 351
+M + V + +L C G L GR +H Y V+ G D+ + NT++ YA
Sbjct: 296 QMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAK 355
Query: 352 CGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISS 411
G+ DA F ++ K V+S+ S+I G V E FRLF +M + G++P ++
Sbjct: 356 YGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCR-PEESFRLFHEMRTSGIRPDITTLLG 414
Query: 412 ILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKD 471
+L AC +A+ HG HGY + +G + ++ NA++DMY K G + A VF M+++D
Sbjct: 415 VLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRD 474
Query: 472 TISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCF 531
+SW+ M+FG +HG GK + LF ++ P D+ A L ACS + + +EG+ F
Sbjct: 475 IVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNP-DEVTLLAILSACSHSGLVDEGKQLF 533
Query: 532 NHI-RG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHG 585
N + RG P I H LLAR G DEA F+ + E VL LL C +
Sbjct: 534 NSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYK 593
Query: 586 EYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWT 645
LG +V +++ L E+ VLL N ++ + + +IR ++RGL +W
Sbjct: 594 NAELGNEVSKKMQSLGE-TTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWV 652
Score = 177 bits (449), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 137/510 (26%), Positives = 235/510 (46%), Gaps = 22/510 (4%)
Query: 115 DFSLGKQLHTHAVKLALS-SRAHTLIALIHLYASLDDIAVAQTLFDKT--APFGSDCWTF 171
+ LG+ +H H +K +L+ S + L+ L LYAS +++ +A+ +FD+ W
Sbjct: 14 NLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDL 73
Query: 172 LAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLG 231
+ + Y AL+L+++M+ + ++ G+ +H
Sbjct: 74 MIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSD 133
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFR 291
+++ +L+ Y CG + A VF++MP +D+V+W +MI G + L++ + LF
Sbjct: 134 FATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFL 193
Query: 292 RM-NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYA 350
M ++GLS P+L + + P G G+L+ G+ +HGY R G D+++ +L +YA
Sbjct: 194 DMRRIDGLS--PNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYA 251
Query: 351 DCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKM--NSEGLKPTAVS 408
AR VF+ K V+W++MI GYV+ E +F +M N T V+
Sbjct: 252 KSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMI-KEAGEVFFQMLVNDNVAMVTPVA 310
Query: 409 ISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMN 468
I IL C R GR +H Y ++ G D+ V N +I Y K G++ A F E+
Sbjct: 311 IGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIG 370
Query: 469 EKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGR 528
KD IS++ +I GC ++ + + LF ++ + P D L ACS G
Sbjct: 371 LKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRP-DITTLLGVLTACSHLAALGHGS 429
Query: 529 VCFNH--IRGPMI--AHCAQKVSLLARCGLFDEAM-VFIREQKIEQHPEVLRKLLEGCRI 583
C + + G + + C + + +CG D A VF K + +L G I
Sbjct: 430 SCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHK--RDIVSWNTMLFGFGI 487
Query: 584 HGEYALGKQVIEQLCELEP--LNAENYVLL 611
HG LGK+ + ++ +N + LL
Sbjct: 488 HG---LGKEALSLFNSMQETGVNPDEVTLL 514
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 164/538 (30%), Positives = 264/538 (49%), Gaps = 22/538 (4%)
Query: 250 GSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM----NLEGLSVKPDLV 305
G + A +F +P W ++IRG + S A +R M + + D +
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 306 MVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQM 365
S L C ++H + R G+ D LL TLL Y+ G A +F++M
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 366 PSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHG 425
P + V SW ++I G V G +E L+++M +EG++ + V++ + L AC + K G
Sbjct: 171 PVRDVASWNALIAGLVS-GNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEG 229
Query: 426 REI-HGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMN-EKDTISWSMMIFGCS 483
I HGY N + VSNA IDMY K G + A VF + +K ++W+ MI G +
Sbjct: 230 ENIFHGYSNDNVI-----VSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFA 284
Query: 484 LHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRGPMI---- 539
+HG+ +++F +LE N P DD Y AAL AC A + E G FN++ +
Sbjct: 285 VHGEAHRALEIFDKLEDNGIKP-DDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNM 343
Query: 540 AHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCE 599
H V LL+R G EA I + P + + LL I+ + + + ++ E
Sbjct: 344 KHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKE 403
Query: 600 LEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDV 659
+ N ++VLL N +A +G+ V ++R+ + + +K ++ + +H F D
Sbjct: 404 MGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDK 463
Query: 660 SHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDV-DEERECTQIEHSELLALAFGLI-- 716
SH + +EI + ++R +G + LHD+ +EE+E HSE LA+A+GL+
Sbjct: 464 SHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMM 523
Query: 717 --SSQAGPIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
+ + P+R+ N R+C CH K +SK+ REII++D FH FK G C+C DFW
Sbjct: 524 DGADEESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 142/293 (48%), Gaps = 16/293 (5%)
Query: 229 KLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAME 288
+ GL + +LL Y G + A +F++MP +DV SW ++I G V SEAME
Sbjct: 137 RRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAME 196
Query: 289 LFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREI-HGYLVRNGVECDVLLSNTLLK 347
L++RM EG ++ V V L C +G +K G I HGY N V++SN +
Sbjct: 197 LYKRMETEG--IRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDN-----VIVSNAAID 249
Query: 348 MYADCGASRDARLVFEQMP-SKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTA 406
MY+ CG A VFEQ K+VV+W +MI G+ G + +F K+ G+KP
Sbjct: 250 MYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGE-AHRALEIFDKLEDNGIKPDD 308
Query: 407 VSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGE 466
VS + L AC ++G + + GVE ++ V+D+ ++G + A ++
Sbjct: 309 VSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICS 368
Query: 467 MNE-KDTISWSMMIFGCSLHGQGKLGVDLFRQLER-----NSEAPLDDNIYAA 513
M+ D + W ++ ++ ++ R+++ + + L N+YAA
Sbjct: 369 MSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAA 421
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 134/334 (40%), Gaps = 20/334 (5%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHA--------VXXXXXXXXXX 106
Q+F P+ T WN +I ++H LA S + ML+ + V
Sbjct: 58 QIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLK 117
Query: 107 XXASRLAADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGS 166
A L + S QLH + LS+ + L+ Y+ D+ A LFD+
Sbjct: 118 ACARALCS--SAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDV 175
Query: 167 DCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDV-HL 225
W L V A+EL+ RM +G +++G ++ H
Sbjct: 176 ASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHG 235
Query: 226 IAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPC-KDVVSWTSMIRGCVQNGELS 284
+ V SN+ + MY CG + A VFE+ K VV+W +MI G +GE
Sbjct: 236 YS-----NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAH 290
Query: 285 EAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNT 344
A+E+F + LE +KPD V L C G +++G + + GVE ++
Sbjct: 291 RALEIFDK--LEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGC 348
Query: 345 LLKMYADCGASRDARLVFEQMPS-KTVVSWTSMI 377
++ + + G R+A + M V W S++
Sbjct: 349 VVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLL 382
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 243 bits (621), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 162/551 (29%), Positives = 268/551 (48%), Gaps = 12/551 (2%)
Query: 141 LIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXX 200
LI + +I+ A+ +FD+ G + + +Y P L L+ +M+
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPD 115
Query: 201 XXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFE 260
L +G V AV G + +VF +S+L +Y+ CG M +A ++F
Sbjct: 116 SSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFG 175
Query: 261 KMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSL 320
KM +DV+ WT+M+ G Q G+ +A+E +R M EG D V++ +L G +G
Sbjct: 176 KMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFG--RDRVVMLGLLQASGDLGDT 233
Query: 321 KHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGY 380
K GR +HGYL R G+ +V++ +L+ MYA G A VF +M KT VSW S+I G+
Sbjct: 234 KMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGF 293
Query: 381 VKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFD 440
+ G N+ F +M S G +P V++ +L AC ++ S K GR +H Y+L+ V D
Sbjct: 294 AQN-GLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LD 351
Query: 441 INVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLER 500
+ A++DMY K GA++ + +F + KD + W+ MI +HG G+ V LF ++
Sbjct: 352 RVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTE 411
Query: 501 NSEAPLDDNIYAAALHACSTARMFEEGR----VCFNHIR-GPMIAHCAQKVSLLARCGLF 555
++ P D +A+ L A S + + E+G+ V N + P H + LLAR G
Sbjct: 412 SNIEP-DHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRV 470
Query: 556 DEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWH 615
+EA+ I +K++ + LL GC H ++G ++ +L P + L+ N+
Sbjct: 471 EEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFF 530
Query: 616 AGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFM 675
A K V K+R+ +R ++ + ++ F D+SH + L+
Sbjct: 531 ATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLK 590
Query: 676 EEMRT--EGVE 684
E+R GVE
Sbjct: 591 TEIRDVCSGVE 601
Score = 153 bits (386), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 120/470 (25%), Positives = 197/470 (41%), Gaps = 17/470 (3%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VFD+ P+ +N++I + + + + QM+ + A
Sbjct: 71 KVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGL 130
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
G+ + AV + ++++LY + A+ LF K A CWT +
Sbjct: 131 VLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVT 190
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
+ G A+E + M +G + GR VH + GL
Sbjct: 191 GFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPM 250
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
V SL+ MY G + A VF +M K VSW S+I G QNG ++A E M
Sbjct: 251 NVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEM- 309
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGA 354
+ L +PDLV + VL C +GSLK GR +H Y+++ V D + + L+ MY+ CGA
Sbjct: 310 -QSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGA 367
Query: 355 SRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILP 414
+R +FE + K +V W +MI Y G EV LF KM ++P + +S+L
Sbjct: 368 LSSSREIFEHVGRKDLVCWNTMISCYGIHGN-GQEVVSLFLKMTESNIEPDHATFASLLS 426
Query: 415 ACGRIASHKHGREIHGYLLRNGVEFDINVSN----AVIDMYVKSGAIACALNVFGEMNEK 470
A + G+ ++ ++ I S +ID+ ++G + AL++
Sbjct: 427 ALSHSGLVEQGQHWFSVMIN---KYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLD 483
Query: 471 DTIS-WSMMIFGCSLH---GQGKLGVDLFRQLERNSEA--PLDDNIYAAA 514
+ + W ++ GC H G + + QL +S L N +A A
Sbjct: 484 NALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATA 533
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 170/647 (26%), Positives = 280/647 (43%), Gaps = 46/647 (7%)
Query: 77 SNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA-----DFSLGKQLHTHAVKLAL 131
S+ H A TF+ + + AS L+A F G Q+H H + +
Sbjct: 15 SHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGV 74
Query: 132 SSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHR 191
+ + L+ Y++ + AQ++ + + W L Y + + + R
Sbjct: 75 EYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKR 134
Query: 192 MVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGS 251
MV + GR VH + ++ N+L+ MY +
Sbjct: 135 MVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRN 194
Query: 252 MRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKP--------- 302
M AR +F++M +D VSW ++I G SEA ELF +M G+ V
Sbjct: 195 MGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGG 254
Query: 303 ------------------------DLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECD 338
D V + L C +IG+++ G+EIHG + + +
Sbjct: 255 CLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGI 314
Query: 339 VLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMN 398
+ NTL+ MY+ C R A +VF Q ++ +W S+I GY + + E L R+M
Sbjct: 315 DNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNK-SEEASHLLREML 373
Query: 399 SEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDIN-VSNAVIDMYVKSGAI 457
G +P +++++SILP C RIA+ +HG+E H Y+LR D + N+++D+Y KSG I
Sbjct: 374 VAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKI 433
Query: 458 ACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHA 517
A V M+++D ++++ +I G G+G + + LF+++ R+ P D A L A
Sbjct: 434 VAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKP-DHVTVVAVLSA 492
Query: 518 CSTARMFEEGRVCFNHIR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPE 572
CS +++ EG F ++ P + H + V L R G +A I +
Sbjct: 493 CSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGA 552
Query: 573 VLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIR 632
LL C IHG +GK E+L E++P N YVL+ N +A G + ++R +R
Sbjct: 553 TWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMR 612
Query: 633 ERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMR 679
+ G+K C W +F GD S P L G + M+
Sbjct: 613 DLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMK 659
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 130/338 (38%), Gaps = 21/338 (6%)
Query: 55 QVFDK----SPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXAS 110
++FDK E + WN + L ++ A+ ++M A
Sbjct: 231 ELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKAC 290
Query: 111 RLAADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWT 170
L LGK++H A+ + + LI +Y+ D+ A +F +T W
Sbjct: 291 SLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWN 350
Query: 171 FLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVH-LIAVK 229
+ Y A L M+ + +L+ G++ H I +
Sbjct: 351 SIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRR 410
Query: 230 LGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMEL 289
+ NSL+ +Y G + A+ V + M +D V++TS+I G GE A+ L
Sbjct: 411 KCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALAL 470
Query: 290 FRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIH-GYLVRNGVECDVLLS------ 342
F+ M G +KPD V V VL C H + +H G + ++C+ +
Sbjct: 471 FKEMTRSG--IKPDHVTVVAVLSAC------SHSKLVHEGERLFMKMQCEYGIRPCLQHF 522
Query: 343 NTLLKMYADCGASRDARLVFEQMPSK-TVVSWTSMIRG 379
+ ++ +Y G A+ + MP K + +W +++
Sbjct: 523 SCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNA 560
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 155/531 (29%), Positives = 255/531 (48%), Gaps = 19/531 (3%)
Query: 120 KQLHTHAVKLALSSRAHTLIALIHLYASLD---DIAVAQTLFDKTAPFGSDCWTFLAKLY 176
QLH +K ++ L LI + +++ A+++F+ W + + Y
Sbjct: 23 NQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGY 82
Query: 177 VLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEV 236
P AL + M+ + ++ G VH VK G E +
Sbjct: 83 SNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNM 142
Query: 237 FASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLE 296
+ S LL MY+ CG + VFE +P +VV+W S+I G V N S+A+E FR M
Sbjct: 143 YVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSN 202
Query: 297 GLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYL--------VRNGVECDVLLSNTLLKM 348
G VK + ++ +L CG + G+ HG+L ++ V +V+L+ +L+ M
Sbjct: 203 G--VKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDM 260
Query: 349 YADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVS 408
YA CG R AR +F+ MP +T+VSW S+I GY + G E +F M G+ P V+
Sbjct: 261 YAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGD-AEEALCMFLDMLDLGIAPDKVT 319
Query: 409 ISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMN 468
S++ A + G+ IH Y+ + G D + A+++MY K+G A F ++
Sbjct: 320 FLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLE 379
Query: 469 EKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGR 528
+KDTI+W+++I G + HG G + +F++++ A D Y L+ACS + EEG+
Sbjct: 380 KKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQ 439
Query: 529 VCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRI 583
F +R P + H V +L+R G F+EA ++ ++ + + LL GC I
Sbjct: 440 RYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDI 499
Query: 584 HGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRER 634
H L ++ + E E L + YVLL N +A G+ V IRE+++ +
Sbjct: 500 HENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSK 550
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 138/335 (41%), Gaps = 11/335 (3%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VF+ P+W+ +AW +LI ++NN F AI F +M + V A
Sbjct: 163 RVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCK 222
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLI--------ALIHLYASLDDIAVAQTLFDKTAPFGS 166
D GK H L + + +LI +YA D+ A+ LFD
Sbjct: 223 DIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTL 282
Query: 167 DCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLI 226
W + Y G AL +F M+ + G + G+ +H
Sbjct: 283 VSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAY 342
Query: 227 AVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEA 286
K G + +L+ MY G A+ FE + KD ++WT +I G +G +EA
Sbjct: 343 VSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEA 402
Query: 287 MELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVR-NGVECDVLLSNTL 345
+ +F+RM +G + PD + VL C IG ++ G+ + +G+E V +
Sbjct: 403 LSIFQRMQEKG-NATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCM 461
Query: 346 LKMYADCGASRDARLVFEQMPSKTVVS-WTSMIRG 379
+ + + G +A + + MP K V+ W +++ G
Sbjct: 462 VDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNG 496
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 121/324 (37%), Gaps = 53/324 (16%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAAD 115
+FD PE ++WN++I + N A+ F ML + AS +
Sbjct: 273 LFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGC 332
Query: 116 FSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKL 175
LG+ +H + K A + AL+++YA D A+ F+ + WT +
Sbjct: 333 SQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIG 392
Query: 176 YVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXX-XMMGSLRQG-------RDVHLIA 227
G AL +F RM +G + +G RD+H
Sbjct: 393 LASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLH--- 449
Query: 228 VKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVS-WTSMIRGCVQNGELSEA 286
GLE V ++ + G +A + + MP K V+ W +++ GC ++ E
Sbjct: 450 ---GLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGC----DIHEN 502
Query: 287 MELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLL 346
+EL R + + +P+ + G I+ VLLSN
Sbjct: 503 LELTDR--IRSMVAEPE-----------------ELGSGIY-----------VLLSN--- 529
Query: 347 KMYADCGASRDARLVFEQMPSKTV 370
+YA G D +L+ E M SK V
Sbjct: 530 -IYAKAGRWADVKLIRESMKSKRV 552
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 151/550 (27%), Positives = 263/550 (47%), Gaps = 17/550 (3%)
Query: 154 AQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXM 213
A++LFD+ WT + Y A E FH MV
Sbjct: 64 ARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRN 123
Query: 214 MGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCG-SMRDARLVFEKMPCKDVVSWTS 272
M L G VH + VKLG+EG ++ N+++ MY C +M A L+F + K+ V+WT+
Sbjct: 124 MKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTT 183
Query: 273 MIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVR 332
+I G G+ ++++++M LE V P + ++ + I S+ G++IH +++
Sbjct: 184 LITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA--VRASASIDSVTTGKQIHASVIK 241
Query: 333 NGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFR 392
G + ++ + N++L +Y CG +A+ F +M K +++W ++I + ++E
Sbjct: 242 RGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSD--SSEALL 299
Query: 393 LFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYV 452
+F++ S+G P + +S++ AC IA+ G+++HG + R G ++ ++NA+IDMY
Sbjct: 300 MFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYA 359
Query: 453 KSGAIACALNVFGEM-NEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIY 511
K G I + VFGE+ + ++ +SW+ M+ G HG G V+LF ++ + P D ++
Sbjct: 360 KCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRP-DRIVF 418
Query: 512 AAALHACSTARMFEEGRVCFNHIRGPM-------IAHCAQKVSLLARCGLFDEAMVFIRE 564
A L AC A + E+G FN + I +C V LL R G EA +
Sbjct: 419 MAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCV--VDLLGRAGKIGEAYELVER 476
Query: 565 QKIEQHPEVLRKLLEGCRIHGEYAL-GKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDM 623
+ +L C+ H L + ++ EL+P YV+L +A +GK
Sbjct: 477 MPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVD 536
Query: 624 VDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGV 683
++R+ +R G K + +W L +V F D P + S L +EE R G
Sbjct: 537 FARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGY 596
Query: 684 EPKWDFSLHD 693
P+ D ++D
Sbjct: 597 VPELDSLVND 606
Score = 169 bits (428), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 205/440 (46%), Gaps = 8/440 (1%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+FD+ P+ D +AW +I + S+N+ A F +M++ + R
Sbjct: 66 SLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMK 125
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSD-CWTFLA 173
+ G +H VKL + + A++++YA+ A L + +D WT L
Sbjct: 126 VLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLI 185
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
+ G L+++ +M+ + S+ G+ +H +K G +
Sbjct: 186 TGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQ 245
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
+ NS+L +Y CG + +A+ F +M KD+++W ++I ++ + SEA+ +F+R
Sbjct: 246 SNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE-LERSDSSEALLMFQRF 304
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCG 353
+G P+ ++++ C I +L G+++HG + R G +V L+N L+ MYA CG
Sbjct: 305 ESQGFV--PNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCG 362
Query: 354 ASRDARLVF-EQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSI 412
D++ VF E + + +VSWTSM+ GY G+ E LF KM S G++P + ++
Sbjct: 363 NIPDSQRVFGEIVDRRNLVSWTSMMIGY-GSHGYGAEAVELFDKMVSSGIRPDRIVFMAV 421
Query: 413 LPACGRIASHKHGREIHGYLLRN-GVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK- 470
L AC + G + + G+ D ++ N V+D+ ++G I A + M K
Sbjct: 422 LSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKP 481
Query: 471 DTISWSMMIFGCSLHGQGKL 490
D +W ++ C H L
Sbjct: 482 DESTWGAILGACKAHKHNGL 501
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 153/471 (32%), Positives = 241/471 (51%), Gaps = 43/471 (9%)
Query: 236 VFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNL 295
+++ N+++ YV G + AR+VF+ MP +DVVSW +M+ G Q+G L EA+ ++
Sbjct: 113 LYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRR 172
Query: 296 EGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGAS 355
G +K + + +L C L+ R+ HG ++ G +V+LS +++ YA CG
Sbjct: 173 SG--IKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQM 230
Query: 356 RDARLVFEQM-------------------------------PSKTVVSWTSMIRGYVKKG 384
A+ F++M P K VSWT++I GYV++G
Sbjct: 231 ESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQG 290
Query: 385 GFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVS 444
N LFRKM + G+KP + SS L A IAS +HG+EIHGY++R V + V
Sbjct: 291 S-GNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVI 349
Query: 445 NAVIDMYVKSGAIACALNVFGEMNEK-DTISWSMMIFGCSLHGQGKLGVDLFRQLERNSE 503
+++IDMY KSG++ + VF ++K D + W+ MI + HG G + + + +
Sbjct: 350 SSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRV 409
Query: 504 APLDDNIYAAALHACSTARMFEEGRVCF-----NHIRGPMIAHCAQKVSLLARCGLFDEA 558
P + L+ACS + + EEG F H P H A + LL R G F E
Sbjct: 410 QP-NRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKEL 468
Query: 559 MVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGK 618
M I E E + +L CRIHG LGK+ ++L +L+P ++ Y+LL + +A
Sbjct: 469 MRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADH 528
Query: 619 GKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVS--HPRKKEI 667
GK ++V+K+R +++R + +KA +W +KV F D S H RK+EI
Sbjct: 529 GKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEI 579
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 149/335 (44%), Gaps = 42/335 (12%)
Query: 217 LRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDV--------- 267
L+ R H + G V S S++ Y CG M A+ F++M KD+
Sbjct: 195 LQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISG 254
Query: 268 ----------------------VSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLV 305
VSWT++I G V+ G + A++LFR+M L VKP+
Sbjct: 255 YAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMI--ALGVKPEQF 312
Query: 306 MVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQM 365
S+ L I SL+HG+EIHGY++R V + ++ ++L+ MY+ G+ + VF
Sbjct: 313 TFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRIC 372
Query: 366 PSK-TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKH 424
K V W +MI + + G ++ R+ M ++P ++ IL AC +
Sbjct: 373 DDKHDCVFWNTMISA-LAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEE 431
Query: 425 G-REIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMN-EKDTISWSMMIFGC 482
G R +++G+ D +ID+ ++G + EM E D W+ ++ C
Sbjct: 432 GLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVC 491
Query: 483 SLHGQ---GKLGVDLFRQLERNSEAP--LDDNIYA 512
+HG GK D +L+ S AP L +IYA
Sbjct: 492 RIHGNEELGKKAADELIKLDPESSAPYILLSSIYA 526
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 120/280 (42%), Gaps = 64/280 (22%)
Query: 281 GELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVE-CDV 339
ELS+A+ + +G+ + DL+ +++L CG SLK G+ IH +L G + +
Sbjct: 25 AELSQAVSRLESLTQQGIRLPFDLL--ASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNT 82
Query: 340 LLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKG--------------- 384
LLSN L+ MY CG DA VF+QM + + SW +M+ GYVK G
Sbjct: 83 LLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPER 142
Query: 385 ---------------GFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIH 429
G +E +++ G+K S + +L AC + + R+ H
Sbjct: 143 DVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAH 202
Query: 430 GYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMN--------------------- 468
G +L G ++ +S ++ID Y K G + A F EM
Sbjct: 203 GQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDME 262
Query: 469 ----------EKDTISWSMMIFGCSLHGQGKLGVDLFRQL 498
EK+ +SW+ +I G G G +DLFR++
Sbjct: 263 AAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKM 302
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 126/344 (36%), Gaps = 35/344 (10%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAAD 115
VFD PE D ++WNT++ + + + A+ + + R + A +
Sbjct: 135 VFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQ 194
Query: 116 FSLGKQLHTHAVKLALSSRA-------------------------------HTLIALIHL 144
L +Q H + S H LI
Sbjct: 195 LQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISG 254
Query: 145 YASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXX 204
YA L D+ A+ LF + WT L YV +G AL+LF +M+
Sbjct: 255 YAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTF 314
Query: 205 XXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPC 264
+ SLR G+++H ++ + +SL+ MY GS+ + VF
Sbjct: 315 SSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDD 374
Query: 265 K-DVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHG 323
K D V W +MI Q+G +A+ + M V+P+ + +L C G ++ G
Sbjct: 375 KHDCVFWNTMISALAQHGLGHKALRMLDDMI--KFRVQPNRTTLVVILNACSHSGLVEEG 432
Query: 324 -REIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMP 366
R V++G+ D L+ + G ++ E+MP
Sbjct: 433 LRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMP 476
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 240 bits (612), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 163/537 (30%), Positives = 264/537 (49%), Gaps = 14/537 (2%)
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLD-DIAVAQTLFDKTAPFGSDCWTFLA 173
F G Q H H VK L + + +L+ LY L + + +FD + WT +
Sbjct: 76 SFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMM 135
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
YV ALE+F MV +G +R GR H + + G E
Sbjct: 136 SGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFE 195
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
F S++L +Y DAR VF++MP DV+ WT+++ +N EA+ LF M
Sbjct: 196 WNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAM 255
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCG 353
+ G + PD TVL CG + LK G+EIHG L+ NG+ +V++ ++LL MY CG
Sbjct: 256 H-RGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCG 314
Query: 354 ASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSIL 413
+ R+AR VF M K VSW++++ GY + G + + +FR+M + L ++L
Sbjct: 315 SVREARQVFNGMSKKNSVSWSALLGGYCQNGE-HEKAIEIFREMEEKDL----YCFGTVL 369
Query: 414 PACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTI 473
AC +A+ + G+EIHG +R G ++ V +A+ID+Y KSG I A V+ +M+ ++ I
Sbjct: 370 KACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMI 429
Query: 474 SWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCF-- 531
+W+ M+ + +G+G+ V F + + P D + A L AC M +EGR F
Sbjct: 430 TWNAMLSALAQNGRGEEAVSFFNDMVKKGIKP-DYISFIAILTACGHTGMVDEGRNYFVL 488
Query: 532 ---NHIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYA 588
++ P H + + LL R GLF+EA + + + LL C + + +
Sbjct: 489 MAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADAS 548
Query: 589 -LGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTW 644
+ +++ +++ ELEP +YVLL N + G+ IR+ + RG+ +W
Sbjct: 549 RVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSW 605
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 193/432 (44%), Gaps = 10/432 (2%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VFD D ++W +++ +++ A+ F +M+ + A
Sbjct: 118 RVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELG 177
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
+ LG+ H + L +LY + A+ +FD+ CWT +
Sbjct: 178 EVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLS 237
Query: 175 LYVLEGMPRSALELFHRM-VXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
+ + AL LF+ M + L+QG+++H + G+
Sbjct: 238 AFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIG 297
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
V +SLL MY CGS+R+AR VF M K+ VSW++++ G QNGE +A+E+FR M
Sbjct: 298 SNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM 357
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCG 353
+ DL TVL C + +++ G+EIHG VR G +V++ + L+ +Y G
Sbjct: 358 E------EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSG 411
Query: 354 ASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSIL 413
A V+ +M + +++W +M+ + + G E F M +G+KP +S +IL
Sbjct: 412 CIDSASRVYSKMSIRNMITWNAMLSA-LAQNGRGEEAVSFFNDMVKKGIKPDYISFIAIL 470
Query: 414 PACGRIASHKHGREIHGYLLRN-GVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDT 472
ACG GR + ++ G++ + +ID+ ++G A N+ ++
Sbjct: 471 TACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRND 530
Query: 473 IS-WSMMIFGCS 483
S W +++ C+
Sbjct: 531 ASLWGVLLGPCA 542
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 171/365 (46%), Gaps = 22/365 (6%)
Query: 281 GELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVL 340
G+L+EA+ + + + P L +++L C + S HG + H ++V++G+E D
Sbjct: 40 GQLTEAIRILNSTHSSEIPATPKLY--ASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRN 97
Query: 341 LSNTLLKMYADCGAS-RDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNS 399
+ N+LL +Y G R+ R VF+ K +SWTSM+ GYV G + + +F +M S
Sbjct: 98 VGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYV-TGKEHVKALEVFVEMVS 156
Query: 400 EGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIAC 459
GL ++SS + AC + + GR HG ++ +G E++ +S+ + +Y +
Sbjct: 157 FGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVD 216
Query: 460 ALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACS 519
A VF EM E D I W+ ++ S + + + LF + R D + + L AC
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 520 TARMFEEGRVCFNHIRGPMI-----AHCAQKVSLL---ARCGLFDEA-MVFIREQKIEQH 570
R ++G+ I G +I ++ + SLL +CG EA VF K ++
Sbjct: 277 NLRRLKQGK----EIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSK--KN 330
Query: 571 PEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRET 630
LL G +GE+ ++ IE E+E + + +L AG + + +I
Sbjct: 331 SVSWSALLGGYCQNGEH---EKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQ 387
Query: 631 IRERG 635
RG
Sbjct: 388 YVRRG 392
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 159/390 (40%), Gaps = 18/390 (4%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLR-HAVXXXXXXXXXXXXASRLA 113
+VFD+ PE D + W ++ N+ + A+ F M R + A
Sbjct: 219 RVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNL 278
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
GK++H + + S +L+ +Y + A+ +F+ + S W+ L
Sbjct: 279 RRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALL 338
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
Y G A+E+F M + ++R G+++H V+ G
Sbjct: 339 GGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCF 394
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
G V ++L+ +Y G + A V+ KM +++++W +M+ QNG EA+ F M
Sbjct: 395 GNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDM 454
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN-GVECDVLLSNTLLKMYADC 352
+G +KPD + +L CG G + GR + ++ G++ + ++ +
Sbjct: 455 VKKG--IKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRA 512
Query: 353 GASRDARLVFEQMPSKTVVS-WTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKP----TAV 407
G +A + E+ + S W ++ + R+ ++M L+P + V
Sbjct: 513 GLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMME--LEPKYHMSYV 570
Query: 408 SISSILPACGRIASHKHGREIHGYLLRNGV 437
+S++ A GR H I ++R GV
Sbjct: 571 LLSNMYKAIGR---HGDALNIRKLMVRRGV 597
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 239 bits (610), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 160/602 (26%), Positives = 269/602 (44%), Gaps = 46/602 (7%)
Query: 121 QLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEG 180
QLH V ++ LI Y D A +FD+ + + L Y
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 181 MPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQ---------GRDVHLIAVKLG 231
M A LF + ++ +L R VH ++ G
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFR 291
+ +VF N ++ Y C ++ AR VF++M +DVVSW SMI G Q+G + ++++
Sbjct: 163 FDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYK 222
Query: 292 RMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYAD 351
M L KP+ V V +V CG L G E+H ++ N ++ D+ L N ++ YA
Sbjct: 223 AM-LACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAK 281
Query: 352 CGASRDARLVFEQMPSKTVVSWTSMIRGYVKKG--------------------------- 384
CG+ AR +F++M K V++ ++I GY+ G
Sbjct: 282 CGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGL 341
Query: 385 ---GFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDI 441
+ EV FR+M G +P V++SS+LP+ ++ K G+EIH + +RNG + +I
Sbjct: 342 MQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNI 401
Query: 442 NVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERN 501
V+ ++ID Y K G + A VF ++ I+W+ +I ++HG LF Q++
Sbjct: 402 YVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCL 461
Query: 502 SEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFD 556
P DD A L A + + + + F+ + P + H A VS+L+R G
Sbjct: 462 GTKP-DDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLS 520
Query: 557 EAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHA 616
+AM FI + I+ +V LL G + G+ + + ++L E+EP N NY ++ N +
Sbjct: 521 DAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYT 580
Query: 617 GKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFME 676
G+ + + +R ++ GLK +W + + F D S R KE+ ++G +E
Sbjct: 581 QAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVE 640
Query: 677 EM 678
M
Sbjct: 641 SM 642
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 112/525 (21%), Positives = 218/525 (41%), Gaps = 52/525 (9%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQML------RHAVXXXXXXXXXXXXA 109
VFD+ + ++N L+ + S + A S F + A A
Sbjct: 79 VFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKA 138
Query: 110 SRLAADF---SLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGS 166
DF SL +Q+H ++ S +I Y D+I A+ +FD+ +
Sbjct: 139 LSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDV 198
Query: 167 DCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGS-LRQGRDVHL 225
W + Y G +++ M+ S L G +VH
Sbjct: 199 VSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHK 258
Query: 226 IAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSE 285
++ ++ ++ N+++ Y CGS+ AR +F++M KD V++ ++I G + +G + E
Sbjct: 259 KMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKE 318
Query: 286 AMELFRRMNLEGLSV-----------------------------KPDLVMVSTVLPVCGM 316
AM LF M GLS +P+ V +S++LP
Sbjct: 319 AMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTY 378
Query: 317 IGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSM 376
+LK G+EIH + +RNG + ++ ++ +++ YA G A+ VF+ +++++WT++
Sbjct: 379 SSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAI 438
Query: 377 IRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLL-RN 435
I Y G ++ LF +M G KP V+++++L A + I +L +
Sbjct: 439 ITAYAVHGD-SDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKY 497
Query: 436 GVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTIS--WSMMIFGCSLHGQ---GKL 490
+E + ++ + ++G ++ A+ +M D I+ W ++ G S+ G +
Sbjct: 498 DIEPGVEHYACMVSVLSRAGKLSDAMEFISKM-PIDPIAKVWGALLNGASVLGDLEIARF 556
Query: 491 GVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR 535
D ++E P + Y + + A +EE + N ++
Sbjct: 557 ACDRLFEME-----PENTGNYTIMANLYTQAGRWEEAEMVRNKMK 596
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 145/332 (43%), Gaps = 33/332 (9%)
Query: 322 HGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYV 381
H ++H +V ++ D L++ L+ Y R A VF+++ + S+ +++ Y
Sbjct: 40 HVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYT 99
Query: 382 KKGGFNNEVFRLFRK------MNSEGLKPTAVSISSILPA---CGRIASHKHGREIHGYL 432
+ + + F LF +S+ +P ++SIS +L A C R++HG++
Sbjct: 100 SREMY-FDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFV 158
Query: 433 LRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGV 492
+R G + D+ V N +I Y K I A VF EM+E+D +SW+ MI G S G +
Sbjct: 159 IRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCK 218
Query: 493 DLFRQLERNSEAPLDDNIYAAALHACSTARMFEEG-----RVCFNHIRGPMIAHCAQKVS 547
+++ + S+ + + AC + G ++ NHI+ + + C +
Sbjct: 219 KMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDL-SLCNAVIG 277
Query: 548 LLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAEN 607
A+CG D A E E+ ++ G HG L K+ + E+E +
Sbjct: 278 FYAKCGSLDYARALFDEMS-EKDSVTYGAIISGYMAHG---LVKEAMALFSEMESIG--- 330
Query: 608 YVLLLNWHAGKGKL-------DMVDKIRETIR 632
L W+A L ++++ RE IR
Sbjct: 331 ---LSTWNAMISGLMQNNHHEEVINSFREMIR 359
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 239 bits (609), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 157/499 (31%), Positives = 241/499 (48%), Gaps = 40/499 (8%)
Query: 215 GSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMI 274
G+L G+ +H VK GL ++ N+L+KMY CG M AR VF++ +DV SW MI
Sbjct: 149 GALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMI 208
Query: 275 RGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNG 334
G + E E++EL M E V P V + VL C + + +H Y+
Sbjct: 209 SGYNRMKEYEESIELLVEM--ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266
Query: 335 VECDVLLSNTLLKMYADCG------------ASRD-------------------ARLVFE 363
E + L N L+ YA CG +RD AR F+
Sbjct: 267 TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFD 326
Query: 364 QMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHK 423
QMP + +SWT MI GY++ G FN E +FR+M S G+ P ++ S+L AC + S +
Sbjct: 327 QMPVRDRISWTIMIDGYLRAGCFN-ESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLE 385
Query: 424 HGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCS 483
G I Y+ +N ++ D+ V NA+IDMY K G A VF +M+++D +W+ M+ G +
Sbjct: 386 IGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLA 445
Query: 484 LHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG-----PM 538
+GQG+ + +F Q++ S P DD Y L AC+ + M ++ R F +R P
Sbjct: 446 NNGQGQEAIKVFFQMQDMSIQP-DDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPS 504
Query: 539 IAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLC 598
+ H V +L R GL EA +R+ + + V LL R+H + + + +++
Sbjct: 505 LVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKIL 564
Query: 599 ELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGD 658
ELEP N Y LL N +AG + + ++R I + +K + H F GD
Sbjct: 565 ELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGD 624
Query: 659 VSHPRKKEICSALQGFMEE 677
SH + +EI L+ +E
Sbjct: 625 KSHLQSEEIYMKLEELAQE 643
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/499 (23%), Positives = 202/499 (40%), Gaps = 42/499 (8%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXA-SRL 112
+++F K PE D + WN +I + + + ML+ V R
Sbjct: 88 YKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRD 147
Query: 113 AADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFL 172
+ GK+LH H VK L S + AL+ +Y+ + +A+ +FD+ W +
Sbjct: 148 GGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLM 207
Query: 173 AKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL 232
Y ++EL M + + VH +
Sbjct: 208 ISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKT 267
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGEL--------- 283
E + N+L+ Y CG M A +F M +DV+SWTS+++G V+ G L
Sbjct: 268 EPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQ 327
Query: 284 ----------------------SEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLK 321
+E++E+FR M G+ PD + +VL C +GSL+
Sbjct: 328 MPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMI--PDEFTMVSVLTACAHLGSLE 385
Query: 322 HGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYV 381
G I Y+ +N ++ DV++ N L+ MY CG S A+ VF M + +WT+M+ G
Sbjct: 386 IGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLA 445
Query: 382 KKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRN-GVEFD 440
G E ++F +M ++P ++ +L AC R+ + + +E
Sbjct: 446 NNGQ-GQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPS 504
Query: 441 INVSNAVIDMYVKSGAIACALNVFGEMN-EKDTISWSMMIFGCSLHGQ---GKLGVDLFR 496
+ ++DM ++G + A + +M ++I W ++ LH +L
Sbjct: 505 LVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKIL 564
Query: 497 QLERNSEA--PLDDNIYAA 513
+LE ++ A L NIYA
Sbjct: 565 ELEPDNGAVYALLCNIYAG 583
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 147/311 (47%), Gaps = 20/311 (6%)
Query: 250 GSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVST 309
G + A +F K+P DVV W +MI+G + E + L+ M EG V PD S
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEG--VTPD----SH 135
Query: 310 VLP--VCGMI---GSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQ 364
P + G+ G+L G+++H ++V+ G+ ++ + N L+KMY+ CG AR VF++
Sbjct: 136 TFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDR 195
Query: 365 MPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKH 424
+ V SW MI GY + + E L +M + PT+V++ +L AC ++
Sbjct: 196 RCKEDVFSWNLMISGYNRMKEYE-ESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDL 254
Query: 425 GREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSL 484
+ +H Y+ E + + NA+++ Y G + A+ +F M +D ISW+ ++ G
Sbjct: 255 CKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVE 314
Query: 485 HGQGKLGVDLFRQLERNSEAPLDDNI-YAAALHACSTARMFEEGRVCFNHIRGP-MIAHC 542
G KL F Q+ P+ D I + + A F E F ++ MI
Sbjct: 315 RGNLKLARTYFDQM------PVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDE 368
Query: 543 AQKVSLLARCG 553
VS+L C
Sbjct: 369 FTMVSVLTACA 379
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 239 bits (609), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 171/723 (23%), Positives = 328/723 (45%), Gaps = 24/723 (3%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
++F DT++W +I + + + A+ +++M++ V AS
Sbjct: 180 ELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG 239
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
GK +H++ + + +L+ Y+ + A + + + WT +
Sbjct: 240 -LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVS 298
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
+V + A+ F M + SL G+ +H +K+G E
Sbjct: 299 GFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFED 358
Query: 235 EVFASNSLLKMYVDC-GSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
N+L+ MY+ C S +A VF M +VVSWT++I G V +G + + L M
Sbjct: 359 STDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLL--M 416
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCG 353
+ V+P++V +S VL C + ++ EIH YL+R V+ ++++ N+L+ YA
Sbjct: 417 EMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSR 476
Query: 354 ASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSIL 413
A V M + +++TS++ + + G + + M +G++ +S+ +
Sbjct: 477 KVDYAWNVIRSMKRRDNITYTSLVTRFNELGK-HEMALSVINYMYGDGIRMDQLSLPGFI 535
Query: 414 PACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTI 473
A + + + G+ +H Y +++G +V N+++DMY K G++ A VF E+ D +
Sbjct: 536 SASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVV 595
Query: 474 SWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNH 533
SW+ ++ G + +G + F ++ R E D + L ACS R+ + G F
Sbjct: 596 SWNGLVSGLASNGFISSALSAFEEM-RMKETEPDSVTFLILLSACSNGRLTDLGLEYFQV 654
Query: 534 IRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYA 588
++ P + H V +L R G +EA + ++ + + + LL CR G +
Sbjct: 655 MKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLS 714
Query: 589 LGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYR 648
LG+ + + L P + Y+LL + + GK ++ K R + E+ L K + +
Sbjct: 715 LGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQ 774
Query: 649 EKVHVFGTGDVSHPRKKE-ICSALQGFMEEMRTEGVEPKWDFSLHDVDEERECTQIEHSE 707
KVH F + DV+ K I + ++ EE++ G S + +E HS
Sbjct: 775 GKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFG-------SPYRGNENASF----HSA 823
Query: 708 LLALAFGLI-SSQAGPIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHC 766
A+ +G I +S P+ + KN +C+ CH+F ++++ ++I ++D N H FK+G C
Sbjct: 824 KQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGEC 883
Query: 767 TCE 769
+C+
Sbjct: 884 SCK 886
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 161/635 (25%), Positives = 258/635 (40%), Gaps = 49/635 (7%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
++FD+ AW +I + F A+S F +M+ +
Sbjct: 79 KLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLR 138
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
D S G ++H +K + +L LY+ A LF + WT +
Sbjct: 139 DISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMIS 198
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
V R AL+ + MV +G L G+ +H + G+
Sbjct: 199 SLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPL 257
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
V SL+ Y M DA V +DV WTS++ G V+N EA+ F +
Sbjct: 258 NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTF--LE 315
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGA 354
+ L ++P+ S +L +C + SL G++IH ++ G E + N L+ MY C A
Sbjct: 316 MRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSA 375
Query: 355 SR-DARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSIL 413
S +A VF M S VVSWT++I G V G F + F L +M ++P V++S +L
Sbjct: 376 SEVEASRVFGAMVSPNVVSWTTLILGLVDHG-FVQDCFGLLMEMVKREVEPNVVTLSGVL 434
Query: 414 PACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTI 473
AC ++ + EIH YLLR V+ ++ V N+++D Y S + A NV M +D I
Sbjct: 435 RACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNI 494
Query: 474 SWSMMIFGCSLHGQGKLGVDLFRQLE----RNSEAPLDDNIYAAA----------LHACS 519
+++ ++ + G+ ++ + + + R + L I A+A LH S
Sbjct: 495 TYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYS 554
Query: 520 TARMF--------------------EEGRVCFNHIRGPMIAHCAQKVSLLARCGLFDEAM 559
F E+ + F I P + VS LA G A+
Sbjct: 555 VKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSAL 614
Query: 560 VFIREQKI-EQHPE--VLRKLLEGCRIHGEYALGK---QVIEQLCELEPLNAENYVLLLN 613
E ++ E P+ LL C LG QV++++ +EP E+YV L+
Sbjct: 615 SAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEP-QVEHYVHLVG 673
Query: 614 WHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYR 648
G+L+ + ET+ LKP TL R
Sbjct: 674 ILGRAGRLEEATGVVETMH---LKPNAMIFKTLLR 705
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 178/408 (43%), Gaps = 10/408 (2%)
Query: 118 LGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYV 177
+G +H +K L L+ LY D I A+ LFD+ + WT + +
Sbjct: 41 IGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFT 100
Query: 178 LEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVF 237
SAL LF M+ + + G VH +K G EG
Sbjct: 101 KSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSV 160
Query: 238 ASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEG 297
+SL +Y CG ++A +F + D +SWT MI V + EA++ + M G
Sbjct: 161 VGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAG 220
Query: 298 LSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRD 357
V P+ +L +G L+ G+ IH ++ G+ +V+L +L+ Y+ D
Sbjct: 221 --VPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMED 277
Query: 358 ARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACG 417
A V + V WTS++ G+V+ E F +M S GL+P + S+IL C
Sbjct: 278 AVRVLNSSGEQDVFLWTSVVSGFVRNLR-AKEAVGTFLEMRSLGLQPNNFTYSAILSLCS 336
Query: 418 RIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIAC-ALNVFGEMNEKDTISWS 476
+ S G++IH ++ G E +V NA++DMY+K A A VFG M + +SW+
Sbjct: 337 AVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWT 396
Query: 477 MMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIY--AAALHACSTAR 522
+I G HG + D F L + ++ N+ + L ACS R
Sbjct: 397 TLILGLVDHGFVQ---DCFGLLMEMVKREVEPNVVTLSGVLRACSKLR 441
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 151/313 (48%), Gaps = 5/313 (1%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIR 275
S R G +H +K GL + N+LL +Y+ + +AR +F++M + V +WT MI
Sbjct: 38 SSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMIS 97
Query: 276 GCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGV 335
++ E + A+ LF M G P+ S+V+ C + + +G +HG +++ G
Sbjct: 98 AFTKSQEFASALSLFEEMMASG--THPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGF 155
Query: 336 ECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFR 395
E + ++ ++L +Y+ CG ++A +F + + +SWT MI V + E + +
Sbjct: 156 EGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKW-REALQFYS 214
Query: 396 KMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSG 455
+M G+ P + +L A + + G+ IH ++ G+ ++ + +++D Y +
Sbjct: 215 EMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFS 273
Query: 456 AIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAAL 515
+ A+ V E+D W+ ++ G + + K V F ++ P ++ Y+A L
Sbjct: 274 KMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQP-NNFTYSAIL 332
Query: 516 HACSTARMFEEGR 528
CS R + G+
Sbjct: 333 SLCSAVRSLDFGK 345
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 237 bits (604), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 171/616 (27%), Positives = 270/616 (43%), Gaps = 12/616 (1%)
Query: 67 AWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAADFSLGKQLHTHA 126
AWN I ++ N ++ F +M R A AD + +H H
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 127 VKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSAL 186
+K S A + ++ + + A +F++ + W + + G A
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 138
Query: 187 ELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMY 246
LF M SL+ +H + ++LG++ +V +N+ + Y
Sbjct: 139 SLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTY 198
Query: 247 VDCGSMRDARLVFEKMPCKD--VVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDL 304
CG + A+LVFE + D VVSW SM + GE +A L+ M E KPDL
Sbjct: 199 GKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLRE--EFKPDL 256
Query: 305 VMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQ 364
+ C +L GR IH + + G + D+ NT + MY+ + ARL+F+
Sbjct: 257 STFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDI 316
Query: 365 MPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKH 424
M S+T VSWT MI GY +KG +E LF M G KP V++ S++ CG+ S +
Sbjct: 317 MTSRTCVSWTVMISGYAEKGDM-DEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLET 375
Query: 425 GREIHGYLLRNGVEFD-INVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCS 483
G+ I G + D + + NA+IDMY K G+I A ++F EK ++W+ MI G +
Sbjct: 376 GKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYA 435
Query: 484 LHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR-----GPM 538
L+G + LF ++ P + + A L AC+ + E+G F+ ++ P
Sbjct: 436 LNGIFLEALKLFSKMIDLDYKP-NHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPG 494
Query: 539 IAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLC 598
+ H + V LL R G +EA+ IR + + LL C+IH + +Q E L
Sbjct: 495 LDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLF 554
Query: 599 ELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGD 658
LEP A YV + N +A G D +IR +++R +K + K H F G+
Sbjct: 555 NLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGE 614
Query: 659 VSHPRKKEICSALQGF 674
H + I L G
Sbjct: 615 HGHVENEVIYFTLNGL 630
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/475 (27%), Positives = 216/475 (45%), Gaps = 23/475 (4%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VF++ PE D WN ++ + H A S F +M + + ++
Sbjct: 108 KVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEK 167
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLF------DKTAPFGSDC 168
L + +H ++L + + I Y D+ A+ +F D+T
Sbjct: 168 SLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVV----S 223
Query: 169 WTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAV 228
W + K Y + G A L+ M+ +L QGR +H A+
Sbjct: 224 WNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAI 283
Query: 229 KLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAME 288
LG + ++ A N+ + MY ARL+F+ M + VSWT MI G + G++ EA+
Sbjct: 284 HLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALA 343
Query: 289 LFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECD-VLLSNTLLK 347
LF M G KPDLV + +++ CG GSL+ G+ I G + D V++ N L+
Sbjct: 344 LFHAMIKSG--EKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALID 401
Query: 348 MYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAV 407
MY+ CG+ +AR +F+ P KTVV+WT+MI GY G F E +LF KM KP +
Sbjct: 402 MYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIF-LEALKLFSKMIDLDYKPNHI 460
Query: 408 SISSILPACGRIASHKHGREIHGYLLRN--GVEFDINVSNAVIDMYVKSGAIACALNVFG 465
+ ++L AC S + G E + ++++ + ++ + ++D+ + G + AL +
Sbjct: 461 TFLAVLQACAHSGSLEKGWE-YFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIR 519
Query: 466 EMNEK-DTISWSMMIFGCSLHGQGKL---GVDLFRQLERNSEAPLDD--NIYAAA 514
M+ K D W ++ C +H K+ + LE AP + NIYAAA
Sbjct: 520 NMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAA 574
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 6/269 (2%)
Query: 267 VVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREI 326
V +W IR V + E++ LFR M G +P+ V C + + +
Sbjct: 17 VNAWNLQIREAVNRNDPVESLLLFREMKRGGF--EPNNFTFPFVAKACARLADVGCCEMV 74
Query: 327 HGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGF 386
H +L+++ DV + + M+ C + A VFE+MP + +W +M+ G+ + G
Sbjct: 75 HAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFC-QSGH 133
Query: 387 NNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNA 446
++ F LFR+M + P +V++ +++ + S K +H +R GV+ + V+N
Sbjct: 134 TDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANT 193
Query: 447 VIDMYVKSGAIACALNVFGEMNEKD--TISWSMMIFGCSLHGQGKLGVDLFRQLERNSEA 504
I Y K G + A VF ++ D +SW+ M S+ G+ L+ + R
Sbjct: 194 WISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFK 253
Query: 505 PLDDNIYAAALHACSTARMFEEGRVCFNH 533
P D + + +C +GR+ +H
Sbjct: 254 P-DLSTFINLAASCQNPETLTQGRLIHSH 281
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 1/137 (0%)
Query: 369 TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREI 428
+V +W IR V + E LFR+M G +P + + AC R+A +
Sbjct: 16 SVNAWNLQIREAVNRND-PVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMV 74
Query: 429 HGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQG 488
H +L+++ D+ V A +DM+VK ++ A VF M E+D +W+ M+ G G
Sbjct: 75 HAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 489 KLGVDLFRQLERNSEAP 505
LFR++ N P
Sbjct: 135 DKAFSLFREMRLNEITP 151
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 135/428 (31%), Positives = 225/428 (52%), Gaps = 15/428 (3%)
Query: 217 LRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRG 276
+R+G+ +H I K+G +++ NSL+ Y CG R+A VF +MP +DVVSWT +I G
Sbjct: 122 IREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITG 181
Query: 277 CVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVE 336
+ G EA++ F +M++E P+L VL G +G L G+ IHG +++
Sbjct: 182 FTRTGLYKEALDTFSKMDVE-----PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASL 236
Query: 337 CDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRK 396
+ N L+ MY C DA VF ++ K VSW SMI G V + E LF
Sbjct: 237 ISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCER-SKEAIDLFSL 295
Query: 397 M-NSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSG 455
M S G+KP ++S+L AC + + HGR +H Y+L G+++D ++ A++DMY K G
Sbjct: 296 MQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCG 355
Query: 456 AIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAAL 515
I AL +F + K+ +W+ ++ G ++HG G + F ++ + P + + AAL
Sbjct: 356 YIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKP-NLVTFLAAL 414
Query: 516 HACSTARMFEEGRVCFNHIRG------PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQ 569
+AC + +EGR F+ ++ P + H + LL R GL DEA+ ++ ++
Sbjct: 415 NACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKP 474
Query: 570 HPEVLRKLLEGCRIHGEYA-LGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIR 628
+ +L C+ G L K++++ ++E ++ YVLL N A + D V +IR
Sbjct: 475 DVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIR 534
Query: 629 ETIRERGL 636
++ +G+
Sbjct: 535 RLMKVKGI 542
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 171/352 (48%), Gaps = 26/352 (7%)
Query: 302 PDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLV 361
PD+ V CG ++ G++IHG + + G D+ + N+L+ Y CG SR+A V
Sbjct: 104 PDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKV 163
Query: 362 FEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIAS 421
F +MP + VVSWT +I G+ + G + E F KM+ E P + +L + GR+
Sbjct: 164 FGEMPVRDVVSWTGIITGFTRTGLY-KEALDTFSKMDVE---PNLATYVCVLVSSGRVGC 219
Query: 422 HKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFG 481
G+ IHG +L+ + NA+IDMYVK ++ A+ VFGE+ +KD +SW+ MI G
Sbjct: 220 LSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISG 279
Query: 482 CSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRGPMI-- 539
+ K +DLF ++ +S D +I + L AC++ + GR +I I
Sbjct: 280 LVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKW 339
Query: 540 -AHCAQK-VSLLARCGLFDEAM-VF--IREQKIEQHPEVLRKLLEGCRIHGEYALGKQVI 594
H V + A+CG + A+ +F IR + + LL G IHG +
Sbjct: 340 DTHIGTAIVDMYAKCGYIETALEIFNGIRSKNV----FTWNALLGGLAIHGHGLESLRYF 395
Query: 595 EQLCEL--EPLNAENYVLLLNWHAGKGKLDMVDKIRETI-----RERGLKPK 639
E++ +L +P N ++ LN G +VD+ R RE L PK
Sbjct: 396 EEMVKLGFKP-NLVTFLAALNACCHTG---LVDEGRRYFHKMKSREYNLFPK 443
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 140/308 (45%), Gaps = 5/308 (1%)
Query: 119 GKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVL 178
GKQ+H K+ + +L+H Y + A +F + WT + +
Sbjct: 125 GKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTR 184
Query: 179 EGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFA 238
G+ + AL+ F +M +G L G+ +H + +K +
Sbjct: 185 TGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLET 241
Query: 239 SNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGL 298
N+L+ MYV C + DA VF ++ KD VSW SMI G V EA++LF M
Sbjct: 242 GNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSS- 300
Query: 299 SVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDA 358
+KPD ++++VL C +G++ HGR +H Y++ G++ D + ++ MYA CG A
Sbjct: 301 GIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETA 360
Query: 359 RLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGR 418
+F + SK V +W +++ G + G E R F +M G KP V+ + L AC
Sbjct: 361 LEIFNGIRSKNVFTWNALLGG-LAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCH 419
Query: 419 IASHKHGR 426
GR
Sbjct: 420 TGLVDEGR 427
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 107/271 (39%), Gaps = 6/271 (2%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VF + P D ++W +I + A+ TF++M V +S
Sbjct: 162 KVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVG 218
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
SLGK +H +K A T ALI +Y + ++ A +F + W +
Sbjct: 219 CLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMIS 278
Query: 175 LYVLEGMPRSALELFHRM-VXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
V + A++LF M +G++ GR VH + G++
Sbjct: 279 GLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIK 338
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
+ +++ MY CG + A +F + K+V +W +++ G +G E++ F M
Sbjct: 339 WDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEM 398
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGR 324
L KP+LV L C G + GR
Sbjct: 399 --VKLGFKPNLVTFLAALNACCHTGLVDEGR 427
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 5/195 (2%)
Query: 308 STVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSN---TLLKMYADCGASRDARLVFEQ 364
S +L + SL+ ++I L+ + D L+ N T L AD AS + ++
Sbjct: 7 SVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADF-ASYSSVILHSI 65
Query: 365 MPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKH 424
+ S+ +++ Y +F ++ S G P + + ACG+ + +
Sbjct: 66 RSVLSSFSYNTLLSSYAVCDKPRVTIFA-YKTFVSNGFSPDMFTFPPVFKACGKFSGIRE 124
Query: 425 GREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSL 484
G++IHG + + G DI V N+++ Y G A VFGEM +D +SW+ +I G +
Sbjct: 125 GKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTR 184
Query: 485 HGQGKLGVDLFRQLE 499
G K +D F +++
Sbjct: 185 TGLYKEALDTFSKMD 199
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 165/589 (28%), Positives = 270/589 (45%), Gaps = 13/589 (2%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VF + P ++W ++ + +N A+ F +M V A +
Sbjct: 306 EVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPS 365
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFG-SDCWTFLA 173
Q+H K + ALI +Y+ DI +++ +F+ + +
Sbjct: 366 MVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMI 425
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
+ P A+ LF RM+ ++ L G+ VH +K GL
Sbjct: 426 TSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLS---VLDCLNLGKQVHGYTLKSGLV 482
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
++ +SL +Y CGS+ ++ +F+ +P KD W SMI G + G L EA+ LF M
Sbjct: 483 LDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEM 542
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCG 353
+G S PD ++ VL VC SL G+EIHGY +R G++ + L + L+ MY+ CG
Sbjct: 543 LDDGTS--PDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCG 600
Query: 354 ASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSIL 413
+ + AR V++++P VS +S+I GY + G + F LFR M G + +ISSIL
Sbjct: 601 SLKLARQVYDRLPELDPVSCSSLISGY-SQHGLIQDGFLLFRDMVMSGFTMDSFAISSIL 659
Query: 414 PACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTI 473
A G ++H Y+ + G+ + +V ++++ MY K G+I F ++N D I
Sbjct: 660 KAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLI 719
Query: 474 SWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNH 533
+W+ +I + HG+ + ++ ++ P D + L ACS + EE N
Sbjct: 720 AWTALIASYAQHGKANEALQVYNLMKEKGFKP-DKVTFVGVLSACSHGGLVEESYFHLNS 778
Query: 534 IRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYA 588
+ P H V L R G EA FI I+ V LL C+IHGE
Sbjct: 779 MVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVE 838
Query: 589 LGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLK 637
LGK ++ ELEP +A Y+ L N A G+ D V++ R+ ++ G++
Sbjct: 839 LGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQ 887
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 201/448 (44%), Gaps = 12/448 (2%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
++VF S + WNT+I L N ++ F +M A
Sbjct: 205 YKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASL 264
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
GK + +K + A++ LYA +A A +F + WT +
Sbjct: 265 EKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVML 323
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
Y SALE+F M + + VH K G
Sbjct: 324 SGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFY 383
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPC---KDVVSWTSMIRGCVQNGELSEAMELF 290
+ + +L+ MY G + + VFE + +++V+ MI Q+ + +A+ LF
Sbjct: 384 LDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQSKKPGKAIRLF 441
Query: 291 RRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYA 350
RM EGL + D V ++L V + L G+++HGY +++G+ D+ + ++L +Y+
Sbjct: 442 TRMLQEGL--RTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYS 496
Query: 351 DCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSIS 410
CG+ ++ +F+ +P K W SMI G+ + G+ E LF +M +G P +++
Sbjct: 497 KCGSLEESYKLFQGIPFKDNACWASMISGF-NEYGYLREAIGLFSEMLDDGTSPDESTLA 555
Query: 411 SILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK 470
++L C S G+EIHGY LR G++ +++ +A+++MY K G++ A V+ + E
Sbjct: 556 AVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPEL 615
Query: 471 DTISWSMMIFGCSLHGQGKLGVDLFRQL 498
D +S S +I G S HG + G LFR +
Sbjct: 616 DPVSCSSLISGYSQHGLIQDGFLLFRDM 643
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 129/245 (52%), Gaps = 10/245 (4%)
Query: 228 VKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAM 287
+K+G ++L+ ++ DA VF +V W ++I G ++N
Sbjct: 177 IKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVF 236
Query: 288 ELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLK 347
+LF M + G KPD S+VL C + L+ G+ + +++ G E DV + ++
Sbjct: 237 DLFHEMCV-GFQ-KPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVD 293
Query: 348 MYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVF---RLFRKMNSEGLKP 404
+YA CG +A VF ++P+ +VVSWT M+ GY K +N+ F +F++M G++
Sbjct: 294 LYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTK----SNDAFSALEIFKEMRHSGVEI 349
Query: 405 TAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVF 464
+++S++ ACGR + ++H ++ ++G D +V+ A+I MY KSG I + VF
Sbjct: 350 NNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVF 409
Query: 465 GEMNE 469
++++
Sbjct: 410 EDLDD 414
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 145/296 (48%), Gaps = 5/296 (1%)
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFR 291
L +VF + SLL Y + GSM DA +F+ +P DVVS MI G Q+ E++ F
Sbjct: 80 LPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFS 139
Query: 292 RMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYAD 351
+M+ G + + + +V+ C + + + + ++ G ++ + L+ +++
Sbjct: 140 KMHFLGF--EANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSK 197
Query: 352 CGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISS 411
DA VF S V W ++I G ++ + VF LF +M KP + + SS
Sbjct: 198 NLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNY-GAVFDLFHEMCVGFQKPDSYTYSS 256
Query: 412 ILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKD 471
+L AC + + G+ + +++ G E D+ V A++D+Y K G +A A+ VF +
Sbjct: 257 VLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPS 315
Query: 472 TISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEG 527
+SW++M+ G + +++F+++ R+S +++ + + AC M E
Sbjct: 316 VVSWTVMLSGYTKSNDAFSALEIFKEM-RHSGVEINNCTVTSVISACGRPSMVCEA 370
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 235 bits (599), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 140/488 (28%), Positives = 240/488 (49%), Gaps = 38/488 (7%)
Query: 228 VKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAM 287
+KL LE N+ + M+ CG M +AR VF++ P +D+VSW +I G + GE +A+
Sbjct: 183 LKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAI 242
Query: 288 ELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLK 347
+++ M EG VKPD V + ++ C M+G L G+E + Y+ NG+ + L N L+
Sbjct: 243 YVYKLMESEG--VKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMD 300
Query: 348 MYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFN-------------------- 387
M++ CG +AR +F+ + +T+VSWT+MI GY + G +
Sbjct: 301 MFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAM 360
Query: 388 ----------NEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGV 437
+ LF++M + KP +++ L AC ++ + G IH Y+ + +
Sbjct: 361 IGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSL 420
Query: 438 EFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQ 497
++ + +++DMY K G I+ AL+VF + +++++++ +I G +LHG + F +
Sbjct: 421 SLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNE 480
Query: 498 LERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR-----GPMIAHCAQKVSLLARC 552
+ AP D+ + L AC M + GR F+ ++ P + H + V LL R
Sbjct: 481 MIDAGIAP-DEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRA 539
Query: 553 GLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLL 612
GL +EA + +E V LL GCR+HG LG++ ++L EL+P ++ YVLL
Sbjct: 540 GLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLD 599
Query: 613 NWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQ 672
+ + + R + ERG++ C+ V F D S P ++I L
Sbjct: 600 GMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLH 659
Query: 673 GFMEEMRT 680
MR+
Sbjct: 660 CLGRHMRS 667
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/502 (23%), Positives = 212/502 (42%), Gaps = 43/502 (8%)
Query: 64 DTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAADF---SLGK 120
+ +WN I + + + + QMLRH ++ AD SLG
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 121 QLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEG 180
+ H +KL L +H A IH++AS D+ A+ +FD++ W L Y G
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236
Query: 181 MPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASN 240
A+ ++ M M+G L +G++ + + GL + N
Sbjct: 237 EAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVN 296
Query: 241 SLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM------- 293
+L+ M+ CG + +AR +F+ + + +VSWT+MI G + G L + +LF M
Sbjct: 297 ALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVL 356
Query: 294 ----------------------NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLV 331
++ + KPD + + L C +G+L G IH Y+
Sbjct: 357 WNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIE 416
Query: 332 RNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVF 391
+ + +V L +L+ MYA CG +A VF + ++ +++T++I G G + +
Sbjct: 417 KYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAI- 475
Query: 392 RLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVS----NAV 447
F +M G+ P ++ +L AC + GR+ Y + F++N + +
Sbjct: 476 SYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRD---YFSQMKSRFNLNPQLKHYSIM 532
Query: 448 IDMYVKSGAIACALNVFGEMN-EKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPL 506
+D+ ++G + A + M E D W ++FGC +HG +LG ++L P
Sbjct: 533 VDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELD--PS 590
Query: 507 DDNIYAAALHACSTARMFEEGR 528
D IY A M+E+ +
Sbjct: 591 DSGIYVLLDGMYGEANMWEDAK 612
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 150/330 (45%), Gaps = 38/330 (11%)
Query: 266 DVVSWTSMIRGCVQNGELSEAMELFRRMNLEGL-SVKPDLVMVSTVLPVCGMIGSLKHGR 324
++ SW IRG ++ E+ L+++M G +PD + VC + G
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 325 EIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKG 384
I G++++ +E + N + M+A CG +AR VF++ P + +VSW +I GY K G
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236
Query: 385 GFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVS 444
++ +++ M SEG+KP V++ ++ +C + G+E + Y+ NG+ I +
Sbjct: 237 EAEKAIY-VYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV 295
Query: 445 NAVIDMYVKSGAI--------------------------ACAL-----NVFGEMNEKDTI 473
NA++DM+ K G I C L +F +M EKD +
Sbjct: 296 NALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 355
Query: 474 SWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEG----RV 529
W+ MI G +G+ + LF++++ ++ P D+ L ACS + G R
Sbjct: 356 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKP-DEITMIHCLSACSQLGALDVGIWIHRY 414
Query: 530 CFNHIRGPMIAHCAQKVSLLARCGLFDEAM 559
+ +A V + A+CG EA+
Sbjct: 415 IEKYSLSLNVALGTSLVDMYAKCGNISEAL 444
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 182/641 (28%), Positives = 275/641 (42%), Gaps = 82/641 (12%)
Query: 118 LGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYV 177
G+ +H + VK L +L +Y + A +FD+ + W L YV
Sbjct: 191 FGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYV 250
Query: 178 LEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVF 237
G A+ LF M MG + +G+ H IA+ G+E +
Sbjct: 251 QNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNI 310
Query: 238 ASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEG 297
SLL Y G + A +VF++M KDVV+W +I G VQ G + +A+ + + M LE
Sbjct: 311 LGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEK 370
Query: 298 LSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLS--------------- 342
L K D V ++T++ +LK G+E+ Y +R+ E D++L+
Sbjct: 371 L--KYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVD 428
Query: 343 ----------------NTLLKMYADCGAS------------------------------- 355
NTLL YA+ G S
Sbjct: 429 AKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLR 488
Query: 356 ----RDARLVFEQMPSKTVV----SWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAV 407
+A+ +F QM S ++ SWT+M+ G V+ G + E RKM GL+P A
Sbjct: 489 NGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNG-CSEEAILFLRKMQESGLRPNAF 547
Query: 408 SISSILPACGRIASHKHGREIHGYLLRNGVEFD-INVSNAVIDMYVKSGAIACALNVFGE 466
SI+ L AC +AS GR IHGY++RN +++ +++DMY K G I A VFG
Sbjct: 548 SITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGS 607
Query: 467 MNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEE 526
+ + MI +L+G K + L+R LE P D+ L AC+ A +
Sbjct: 608 KLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKP-DNITITNVLSACNHAGDINQ 666
Query: 527 GRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGC 581
F I P + H V LLA G ++A+ I E + +++ L+ C
Sbjct: 667 AIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASC 726
Query: 582 RIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKA 641
+ L + +L E EP N+ NYV + N +A +G D V K+RE ++ +GLK K
Sbjct: 727 NKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPG 786
Query: 642 CTWTLY--REKVHVFGTGDVSHPRKKEICSALQGFMEEMRT 680
C+W E VHVF D +H R EI L + +M T
Sbjct: 787 CSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDMGT 827
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/460 (29%), Positives = 224/460 (48%), Gaps = 14/460 (3%)
Query: 115 DFSLGKQLHTHAVKLA--LSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFL 172
D S GKQ+H +K + + L+ YA D + +A+ LF K W +
Sbjct: 85 DLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAI 144
Query: 173 AKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL 232
+ G+ AL F M+ + R GR VH VK GL
Sbjct: 145 IGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGL 204
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
E VF ++SL MY CG + DA VF+++P ++ V+W +++ G VQNG+ EA+ LF
Sbjct: 205 EDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSD 264
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADC 352
M +G V+P V VST L +G ++ G++ H + NG+E D +L +LL Y
Sbjct: 265 MRKQG--VEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKV 322
Query: 353 GASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSI 412
G A +VF++M K VV+W +I GYV++G + ++ + + M E LK V+++++
Sbjct: 323 GLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIY-MCQLMRLEKLKYDCVTLATL 381
Query: 413 LPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDT 472
+ A R + K G+E+ Y +R+ E DI +++ V+DMY K G+I A VF EKD
Sbjct: 382 MSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDL 441
Query: 473 ISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTAR--MFEEGRVC 530
I W+ ++ + G + LF ++ P N+ L S R +E +
Sbjct: 442 ILWNTLLAAYAESGLSGEALRLFYGMQLEGVPP---NVITWNLIILSLLRNGQVDEAKDM 498
Query: 531 FNHIRG----PMIAHCAQKVSLLARCGLFDEAMVFIREQK 566
F ++ P + ++ + + G +EA++F+R+ +
Sbjct: 499 FLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQ 538
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 129/262 (49%), Gaps = 6/262 (2%)
Query: 269 SWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHG 328
S+ + +NGE+ EA+ L M+ L + P++ +L C L G++IH
Sbjct: 37 SYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEI--YGEILQGCVYERDLSTGKQIHA 94
Query: 329 YLVRNG--VECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGF 386
+++NG + + L+ YA C A A ++F ++ + V SW ++I G + G
Sbjct: 95 RILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAII-GVKCRIGL 153
Query: 387 NNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNA 446
F +M + P + ++ ACG + + GR +HGY++++G+E + V+++
Sbjct: 154 CEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASS 213
Query: 447 VIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPL 506
+ DMY K G + A VF E+ +++ ++W+ ++ G +G+ + + LF + + P
Sbjct: 214 LADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPT 273
Query: 507 DDNIYAAALHACSTARMFEEGR 528
+ + L A + EEG+
Sbjct: 274 RVTV-STCLSASANMGGVEEGK 294
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 230 bits (587), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 174/603 (28%), Positives = 283/603 (46%), Gaps = 25/603 (4%)
Query: 55 QVFDKSPEWDTLA-WNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
+VFDK PE D +A WN +I + + ++ F +M + V
Sbjct: 144 EVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYG 203
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
+ GKQ+H+ +K + + ALI +Y + + A +F++T D TF
Sbjct: 204 S-LDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNV 262
Query: 174 KLYVLEGMPRS-ALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLR---QGRDVHLIAVK 229
+ L G R +L +F +M+ +MGS G VH +A+K
Sbjct: 263 VIDGLAGFKRDESLLVFRKMLEASLRPTDLTFVS------VMGSCSCAAMGHQVHGLAIK 316
Query: 230 LGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMEL 289
G E SN+ + MY A VFE + KD+V+W +MI Q AM +
Sbjct: 317 TGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSV 376
Query: 290 FRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMY 349
++RM++ G VKPD ++L + L+ + +++ G+ + +SN L+ Y
Sbjct: 377 YKRMHIIG--VKPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKIEISNALISAY 431
Query: 350 ADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSE-GLKPTAVS 408
+ G A L+FE+ K ++SW ++I G+ G + R + SE + P A +
Sbjct: 432 SKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYT 491
Query: 409 ISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMN 468
+S++L C +S G + H Y+LR+G + + NA+I+MY + G I +L VF +M+
Sbjct: 492 LSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMS 551
Query: 469 EKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGR 528
EKD +SW+ +I S HG+G+ V+ ++ ++ + D ++A L ACS A + EEG
Sbjct: 552 EKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGL 611
Query: 529 VCFNHI---RGPM--IAHCAQKVSLLARCGLFDEA--MVFIREQKIEQHPEVLRKLLEGC 581
FN + G + + H + V LL R G DEA +V I E+ I +V L C
Sbjct: 612 EIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSAC 671
Query: 582 RIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKA 641
HG+ LGK V + L E E + YV L N +AG G ++ R I G ++
Sbjct: 672 AAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRG 731
Query: 642 CTW 644
C+W
Sbjct: 732 CSW 734
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 145/307 (47%), Gaps = 47/307 (15%)
Query: 220 GRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTS------- 272
G VH A++ GL SN+LL +Y G++ + F+++ DV SWT+
Sbjct: 76 GGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFK 135
Query: 273 -------------------------MIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMV 307
MI GC ++G ++ELFR M+ L V+ D
Sbjct: 136 LGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMH--KLGVRHDKFGF 193
Query: 308 STVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQ--M 365
+T+L +C GSL G+++H +++ G + N L+ MY +C DA LVFE+ +
Sbjct: 194 ATILSMCDY-GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDV 252
Query: 366 PSKTVVSWTSMIRGYVKKGGFN-NEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKH 424
+ V++ +I G GF +E +FRKM L+PT ++ S++ +C A
Sbjct: 253 AVRDQVTFNVVIDGL---AGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---M 306
Query: 425 GREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSL 484
G ++HG ++ G E VSNA + MY A VF + EKD ++W+ MI S
Sbjct: 307 GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMI---SS 363
Query: 485 HGQGKLG 491
+ Q KLG
Sbjct: 364 YNQAKLG 370
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 115/280 (41%), Gaps = 6/280 (2%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
H+VF+ E D + WNT+I ++ N L S + R + +
Sbjct: 343 HKVFESLEEKDLVTWNTMISSY---NQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATS 399
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
D + + + +K LSS+ ALI Y+ I A LF+++ W +
Sbjct: 400 LDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAII 459
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMM--GSLRQGRDVHLIAVKLG 231
+ G P LE F ++ + SL G H ++ G
Sbjct: 460 SGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHG 519
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFR 291
E N+L+ MY CG+++++ VF +M KDVVSW S+I ++GE A+ ++
Sbjct: 520 QFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYK 579
Query: 292 RMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLV 331
M EG V PD S VL C G ++ G EI +V
Sbjct: 580 TMQDEG-KVIPDAATFSAVLSACSHAGLVEEGLEIFNSMV 618
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 132/284 (46%), Gaps = 39/284 (13%)
Query: 274 IRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN 333
+ G ++GE A++LF ++ +++PD VS + + G ++H Y +R+
Sbjct: 28 LTGLTRSGENRNALKLFADVH-RCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRS 86
Query: 334 GVECDVLLSNTLLKMYADCG--ASRDARL-----------------------------VF 362
G+ C +SNTLL +Y G AS + VF
Sbjct: 87 GLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVF 146
Query: 363 EQMPSKTVVS-WTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIAS 421
++MP + V+ W +MI G K+ G++ LFR+M+ G++ ++IL C S
Sbjct: 147 DKMPERDDVAIWNAMITG-CKESGYHETSVELFREMHKLGVRHDKFGFATILSMCD-YGS 204
Query: 422 HKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMN--EKDTISWSMMI 479
G+++H +++ G +V NA+I MY + A VF E + +D ++++++I
Sbjct: 205 LDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVI 264
Query: 480 FGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARM 523
G + + + + +FR++ S P D + + + +CS A M
Sbjct: 265 DGLAGFKRDE-SLLVFRKMLEASLRPTDLT-FVSVMGSCSCAAM 306
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 135/437 (30%), Positives = 218/437 (49%), Gaps = 11/437 (2%)
Query: 343 NTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGL 402
N +++ G S A+ V + V++W MI GYV+ + + L ++ +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 403 KPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALN 462
KP S +S L AC R+ H + +H ++ +G+E + +S+A++D+Y K G I +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 463 VFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTAR 522
VF + D W+ MI G + HG + +F ++E +P D + L CS
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSP-DSITFLGLLTTCSHCG 280
Query: 523 MFEEGRVCFNHIR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKL 577
+ EEG+ F + P + H V LL R G EA I IE + R L
Sbjct: 281 LLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSL 340
Query: 578 LEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLK 637
L R + LG+ I+ L + + + +YVLL N ++ K + K+RE + + G++
Sbjct: 341 LSSSRTYKNPELGEIAIQNLSKAK---SGDYVLLSNIYSSTKKWESAQKVRELMSKEGIR 397
Query: 638 PKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDV-DE 696
K +W + +H F GD SH K I L+G +++ +++G D L DV +E
Sbjct: 398 KAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEE 457
Query: 697 ERECTQIEHSELLALAFGLISSQAGP-IRLEKNSRVCRGCHDFAKFVSKVTGREIILKDP 755
E+E HSE LALA+ ++ S G IR++KN R+C CH++ K VSK+ R II++D
Sbjct: 458 EKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDR 517
Query: 756 NFFHHFKHGHCTCEDFW 772
FH F+ G C+C D+W
Sbjct: 518 IRFHRFEDGLCSCRDYW 534
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 137/289 (47%), Gaps = 6/289 (2%)
Query: 230 LGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMEL 289
L L V N +++ + G A+ V ++V++W MI G V+N + EA++
Sbjct: 92 LSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKA 151
Query: 290 FRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMY 349
+ M L +KP+ ++ L C +G L H + +H ++ +G+E + +LS+ L+ +Y
Sbjct: 152 LKNM-LSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVY 210
Query: 350 ADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSI 409
A CG +R VF + V W +MI G+ G E R+F +M +E + P +++
Sbjct: 211 AKCGDIGTSREVFYSVKRNDVSIWNAMITGFATH-GLATEAIRVFSEMEAEHVSPDSITF 269
Query: 410 SSILPACGRIASHKHGREIHGYLLRN-GVEFDINVSNAVIDMYVKSGAIACALNVFGEMN 468
+L C + G+E G + R ++ + A++D+ ++G + A + M
Sbjct: 270 LGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMP 329
Query: 469 -EKDTISWSMMIFGCSLHGQGKLGVDLFRQLE--RNSEAPLDDNIYAAA 514
E D + W ++ + +LG + L ++ + L NIY++
Sbjct: 330 IEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSGDYVLLSNIYSST 378
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Query: 214 MGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSM 273
+G L + VH + + G+E S++L+ +Y CG + +R VF + DV W +M
Sbjct: 178 LGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAM 237
Query: 274 IRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN 333
I G +G +EA+ +F M E +S PD + +L C G L+ G+E G + R
Sbjct: 238 ITGFATHGLATEAIRVFSEMEAEHVS--PDSITFLGLLTTCSHCGLLEEGKEYFGLMSRR 295
Query: 334 -GVECDVLLSNTLLKMYADCGASRDARLVFEQMP-SKTVVSWTSMI 377
++ + ++ + G ++A + E MP VV W S++
Sbjct: 296 FSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 162/618 (26%), Positives = 288/618 (46%), Gaps = 11/618 (1%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VFD P D +AW+TL+ + L N A+ F M+ V
Sbjct: 157 KVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELG 216
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
+ + +H + +L+ +Y+ D+ ++ +F+K A + WT +
Sbjct: 217 CLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMIS 276
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
Y AL F M+ ++G +R+G+ VH AV+ L+
Sbjct: 277 SYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDP 336
Query: 235 EVFA-SNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
+ S +L+++Y +CG + D V + +++V+W S+I G + +A+ LFR+M
Sbjct: 337 NYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQM 396
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCG 353
+ +KPD +++ + C G + G++IHG+++R V D + N+L+ MY+ G
Sbjct: 397 VTQ--RIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSG 453
Query: 354 ASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSIL 413
+ A VF Q+ ++VV+W SM+ G+ + G + E LF M L+ V+ +++
Sbjct: 454 SVDSASTVFNQIKHRSVVTWNSMLCGFSQNGN-SVEAISLFDYMYHSYLEMNEVTFLAVI 512
Query: 414 PACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTI 473
AC I S + G+ +H L+ +G++ D+ A+IDMY K G + A VF M+ + +
Sbjct: 513 QACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIV 571
Query: 474 SWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNH 533
SWS MI +HG+ + F Q+ + P ++ ++ L AC + EEG+ FN
Sbjct: 572 SWSSMINAYGMHGRIGSAISTFNQMVESGTKP-NEVVFMNVLSACGHSGSVEEGKYYFNL 630
Query: 534 IRG----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYAL 589
++ P H A + LL+R G EA I+E V L+ GCRIH + +
Sbjct: 631 MKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDI 690
Query: 590 GKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYRE 649
K + L ++ + Y LL N +A +G+ + ++R ++ LK + +
Sbjct: 691 IKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQ 750
Query: 650 KVHVFGTGDVSHPRKKEI 667
KV FG G+ + + EI
Sbjct: 751 KVFRFGAGEENRIQTDEI 768
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 131/466 (28%), Positives = 229/466 (49%), Gaps = 18/466 (3%)
Query: 111 RLAADFSLGKQLHTHA-VKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCW 169
R + L QLH H V L + LI YA + ++ +F+ S +
Sbjct: 9 RSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMY 68
Query: 170 TFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGS---LRQGRDVHLI 226
L K V + +A++L+HR+V GS L G VH
Sbjct: 69 GVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACA--GSREHLSVGGKVHGR 126
Query: 227 AVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEA 286
+K G++ + SLL MY G++ DA VF+ MP +D+V+W++++ C++NGE+ +A
Sbjct: 127 IIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKA 186
Query: 287 MELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLL 346
+ +F+ M +G V+PD V + +V+ C +G L+ R +HG + R + D L N+LL
Sbjct: 187 LRMFKCMVDDG--VEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLL 244
Query: 347 KMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTA 406
MY+ CG + +FE++ K VSWT+MI Y +G F+ + R F +M G++P
Sbjct: 245 TMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSY-NRGEFSEKALRSFSEMIKSGIEPNL 303
Query: 407 VSISSILPACGRIASHKHGREIHGYLLRNGVEFDIN---VSNAVIDMYVKSGAIACALNV 463
V++ S+L +CG I + G+ +HG+ +R E D N +S A++++Y + G ++ V
Sbjct: 304 VTLYSVLSSCGLIGLIREGKSVHGFAVRR--ELDPNYESLSLALVELYAECGKLSDCETV 361
Query: 464 FGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARM 523
+++++ ++W+ +I + G + LFRQ+ P D A+++ AC A +
Sbjct: 362 LRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKP-DAFTLASSISACENAGL 420
Query: 524 FEEGRVCFNH-IRGPMIAHCAQK--VSLLARCGLFDEAMVFIREQK 566
G+ H IR + Q + + ++ G D A + K
Sbjct: 421 VPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIK 466
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 229 bits (584), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 161/533 (30%), Positives = 250/533 (46%), Gaps = 18/533 (3%)
Query: 116 FSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKL 175
F LG QLH +K +LI +YA + +FD+ + + +
Sbjct: 63 FLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINS 122
Query: 176 YVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQ-GRDVH-LIAVKLGLE 233
+G+ A++L M MGS + R H L+ V ++
Sbjct: 123 CCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQ 182
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
V S +L+ MY+ A VF++M K+ VSWT+MI GCV N ++LFR M
Sbjct: 183 ESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAM 242
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHG----REIHGYLVRNGVECDVLLSNTLLKMY 349
E L +P+ V + +VLP C L +G +EIHG+ R+G D L+ + MY
Sbjct: 243 QRENL--RPNRVTLLSVLPACV---ELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMY 297
Query: 350 ADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSI 409
CG +R++FE + VV W+SMI GY + G + EV L +M EG++ +V++
Sbjct: 298 CRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCS-EVMNLLNQMRKEGIEANSVTL 356
Query: 410 SSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNE 469
+I+ AC +H +L+ G I + NA+IDMY K G+++ A VF E+ E
Sbjct: 357 LAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTE 416
Query: 470 KDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRV 529
KD +SWS MI LHG G +++F+ + + +DD + A L AC+ A + EE +
Sbjct: 417 KDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGH-EVDDMAFLAILSACNHAGLVEEAQT 475
Query: 530 CFNH---IRGPM-IAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHG 585
F P+ + H A ++LL R G D+A ++ + LL C HG
Sbjct: 476 IFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHG 535
Query: 586 EYAL-GKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLK 637
+ GK + +L + EP N NYVLL H G +++R ++ R L
Sbjct: 536 RLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLN 588
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 112/272 (41%), Gaps = 3/272 (1%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXAS-RLAA 114
VFD+ + ++W +I ++N ++ + + F M R + A L
Sbjct: 207 VFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNY 266
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
SL K++H + + + A + +Y ++++++ LF+ + W+ +
Sbjct: 267 GSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMIS 326
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
Y G + L ++M L VH +K G
Sbjct: 327 GYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMS 386
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
+ N+L+ MY CGS+ AR VF ++ KD+VSW+SMI +G SEA+E+F+ M
Sbjct: 387 HILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMI 446
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREI 326
G V D + +L C G ++ + I
Sbjct: 447 KGGHEV--DDMAFLAILSACNHAGLVEEAQTI 476
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 228 bits (582), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 165/572 (28%), Positives = 264/572 (46%), Gaps = 21/572 (3%)
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
A+ + KQLH ++ L H LI + +A +F++ L
Sbjct: 30 ANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLI 89
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
+ + P A +F M L + +H KLGL
Sbjct: 90 RAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLS 149
Query: 234 GEVFASNSLLKMYVDCGSM--RDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFR 291
+++ N+L+ Y CG + RDA +FEKM +D VSW SM+ G V+ GEL +A LF
Sbjct: 150 SDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFD 209
Query: 292 RMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYAD 351
M + DL+ +T+L + E L E + + +T++ Y+
Sbjct: 210 EMP------QRDLISWNTMLDGYARCREMSKAFE----LFEKMPERNTVSWSTMVMGYSK 259
Query: 352 CGASRDARLVFEQMP--SKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSI 409
G AR++F++MP +K VV+WT +I GY +KG E RL +M + GLK A ++
Sbjct: 260 AGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKG-LLKEADRLVDQMVASGLKFDAAAV 318
Query: 410 SSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNE 469
SIL AC G IH L R+ + + V NA++DMY K G + A +VF ++ +
Sbjct: 319 ISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPK 378
Query: 470 KDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRV 529
KD +SW+ M+ G +HG GK ++LF ++ R P D + A L +C+ A + +EG
Sbjct: 379 KDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRP-DKVTFIAVLCSCNHAGLIDEGID 437
Query: 530 CFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIH 584
F + P + H V LL R G EA+ ++ +E + + LL CR+H
Sbjct: 438 YFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMH 497
Query: 585 GEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTW 644
E + K+V++ L +L+P + NY LL N +A + V IR ++ G++ +
Sbjct: 498 NEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASS 557
Query: 645 TLYREKVHVFGTGDVSHPRKKEICSALQGFME 676
+ +H F D SHP+ +I L +E
Sbjct: 558 VELEDGIHEFTVFDKSHPKSDQIYQMLGSLIE 589
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 137/327 (41%), Gaps = 14/327 (4%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
++F+K E DT++WN+++ + A F +M + + ++
Sbjct: 175 KLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSK 234
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDC--WTFL 172
F L +++ + ++ Y+ D+ +A+ +FDK + WT +
Sbjct: 235 AFELFEKMPER--------NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTII 286
Query: 173 AKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL 232
Y +G+ + A L +MV G L G +H I + L
Sbjct: 287 IAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNL 346
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
+ N+LL MY CG+++ A VF +P KD+VSW +M+ G +G EA+ELF R
Sbjct: 347 GSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSR 406
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVR-NGVECDVLLSNTLLKMYAD 351
M EG ++PD V VL C G + G + + + + V L+ +
Sbjct: 407 MRREG--IRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGR 464
Query: 352 CGASRDARLVFEQMP-SKTVVSWTSMI 377
G ++A V + MP VV W +++
Sbjct: 465 VGRLKEAIKVVQTMPMEPNVVIWGALL 491
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 148/472 (31%), Positives = 237/472 (50%), Gaps = 14/472 (2%)
Query: 220 GRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQ 279
GR VH K+GLE +V ++SL+ MY CG + AR +F+++ +D VSW SMI G +
Sbjct: 151 GRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSE 210
Query: 280 NGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDV 339
G +AM+LFR+M EG +PD + ++L C +G L+ GR + + +
Sbjct: 211 AGYAKDAMDLFRKMEEEGF--EPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLST 268
Query: 340 LLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNS 399
L + L+ MY CG AR VF QM K V+WT+MI Y + G ++E F+LF +M
Sbjct: 269 FLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGK-SSEAFKLFFEMEK 327
Query: 400 EGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIAC 459
G+ P A ++S++L ACG + + + G++I + ++ +I V+ ++DMY K G +
Sbjct: 328 TGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEE 387
Query: 460 ALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACS 519
AL VF M K+ +W+ MI + G K + LF ++ P D + L AC
Sbjct: 388 ALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM----SVPPSDITFIGVLSACV 443
Query: 520 TARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVL 574
A + +G F+ + P I H + LL+R G+ DEA F+ + +L
Sbjct: 444 HAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIML 503
Query: 575 RKLLEGCRIHGEYALGKQVIEQLCEL-EPLNAENYVLLLNWHAGKGKLDMVDKIRETIRE 633
+L C + A+ ++ + L E+ E NA NYV+ N A D K+R +R+
Sbjct: 504 AAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRD 563
Query: 634 RGLKPKKACTWTLYREKVHVFGTG-DVSHPRKKEICSALQGFMEEMRTEGVE 684
RG+ C+W ++ F G D +++ S +EEM+ E E
Sbjct: 564 RGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSLFDLLVEEMKRERYE 615
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 186/405 (45%), Gaps = 10/405 (2%)
Query: 56 VFDKSPEWDTLAWNTLIH--THLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
+F + E + ++N +I T+ N+H A+S + +M + A
Sbjct: 87 LFSVTEEPNHYSFNYMIRGLTNTWNDH-EAALSLYRRMKFSGLKPDKFTYNFVFIACAKL 145
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
+ +G+ +H+ K+ L H +LI +YA + A+ LFD+ + W +
Sbjct: 146 EEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMI 205
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
Y G + A++LF +M +G LR GR + +A+ +
Sbjct: 206 SGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIG 265
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
F + L+ MY CG + AR VF +M KD V+WT+MI QNG+ SEA +LF M
Sbjct: 266 LSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM 325
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCG 353
G+S PD +STVL CG +G+L+ G++I + ++ ++ ++ L+ MY CG
Sbjct: 326 EKTGVS--PDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCG 383
Query: 354 ASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSIL 413
+A VFE MP K +W +MI Y + G E LF +M+ + P+ ++ +L
Sbjct: 384 RVEEALRVFEAMPVKNEATWNAMITAYAHQ-GHAKEALLLFDRMS---VPPSDITFIGVL 439
Query: 414 PACGRIA-SHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAI 457
AC H+ R H G+ I +ID+ ++G +
Sbjct: 440 SACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGML 484
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 154/370 (41%), Gaps = 57/370 (15%)
Query: 319 SLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIR 378
S+ R+I ++ + VE N L+ + G + +F S+ MIR
Sbjct: 49 SVNQLRQIQAQMLLHSVEK----PNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIR 104
Query: 379 GYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVE 438
G + L+R+M GLKP + + + AC ++ GR +H L + G+E
Sbjct: 105 GLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLE 164
Query: 439 FDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQL 498
D+++++++I MY K G + A +F E+ E+DT+SW+ MI G S G K +DLFR++
Sbjct: 165 RDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKM 224
Query: 499 ERNSEAPLDDNIYAAALHACS------TARMFEE-------------------------- 526
E P D+ + L ACS T R+ EE
Sbjct: 225 EEEGFEP-DERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGD 283
Query: 527 ---GRVCFNH-IRGPMIAHCAQKVSLLARCGLFDEAM-VFIREQKIEQHPE--VLRKLLE 579
R FN I+ +A A +++ ++ G EA +F +K P+ L +L
Sbjct: 284 LDSARRVFNQMIKKDRVAWTAM-ITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLS 342
Query: 580 GCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDK---IRETIRERGL 636
C G LGKQ+ EL L N + G +DM K + E +R
Sbjct: 343 ACGSVGALELGKQIETHASELS--------LQHNIYVATGLVDMYGKCGRVEEALRVFEA 394
Query: 637 KP-KKACTWT 645
P K TW
Sbjct: 395 MPVKNEATWN 404
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 123/315 (39%), Gaps = 6/315 (1%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
++FD+ E DT++WN++I + + A+ F +M A
Sbjct: 188 KLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLG 247
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
D G+ L A+ + LI +Y D+ A+ +F++ WT +
Sbjct: 248 DLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMIT 307
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
+Y G A +LF M +G+L G+ + A +L L+
Sbjct: 308 VYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQH 367
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
++ + L+ MY CG + +A VFE MP K+ +W +MI G EA+ LF RM
Sbjct: 368 NIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM- 426
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHG-REIHGYLVRNGVECDVLLSNTLLKMYADCG 353
SV P + VL C G + G R H G+ + ++ + + G
Sbjct: 427 ----SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAG 482
Query: 354 ASRDARLVFEQMPSK 368
+A E+ P K
Sbjct: 483 MLDEAWEFMERFPGK 497
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 110/309 (35%), Gaps = 51/309 (16%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VF++ + D +AW +I + N A F +M + V A
Sbjct: 289 RVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVG 348
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
LGKQ+ THA +L+L + L+ +Y + A +F+ W +
Sbjct: 349 ALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMIT 408
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
Y +G + AL LF RM D+ I V L
Sbjct: 409 AYAHQGHAKEALLLFDRMSVPPS------------------------DITFIGV---LSA 441
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
V A ++ C + +F +P + +T++I + G L EA E R
Sbjct: 442 CVHAG----LVHQGCRYFHEMSSMFGLVP--KIEHYTNIIDLLSRAGMLDEAWEFMER-- 493
Query: 295 LEGLSVKPDLVMVSTVLPVC-------------GMIGSLKHGREIHGYLVRNGVECDVLL 341
KPD +M++ +L C M+ +K + Y++ + V D+ +
Sbjct: 494 ---FPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKM 550
Query: 342 SNTLLKMYA 350
+ KM A
Sbjct: 551 WDESAKMRA 559
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 226 bits (577), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 152/595 (25%), Positives = 270/595 (45%), Gaps = 23/595 (3%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAAD 115
VF++ D +W T++ + N F + F M + V A+ D
Sbjct: 256 VFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGD 315
Query: 116 FSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKL 175
G +H +AV+ L +L+ +Y+ ++ +A+ LF W+ +
Sbjct: 316 LVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIAS 375
Query: 176 YVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGE 235
Y G A+ LF M+ + + R G+ +H A+K +E E
Sbjct: 376 YEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESE 435
Query: 236 VFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNL 295
+ + +++ MY CG A FE++P KD V++ ++ +G Q G+ ++A ++++ M L
Sbjct: 436 LETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKL 495
Query: 296 EGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGAS 355
G V PD + +L C G ++G ++++G + + +++ L+ M+ C A
Sbjct: 496 HG--VCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDAL 553
Query: 356 RDARLVFEQMP-SKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILP 414
A ++F++ K+ VSW M+ GY+ G E FR+M E +P AV+ +I+
Sbjct: 554 AAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQ-AEEAVATFRQMKVEKFQPNAVTFVNIVR 612
Query: 415 ACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTIS 474
A +++ + G +H L++ G V N+++DMY K G I + F E++ K +S
Sbjct: 613 AAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVS 672
Query: 475 WSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFN-- 532
W+ M+ + HG V LF ++ N P D + + L AC A + EEG+ F
Sbjct: 673 WNTMLSAYAAHGLASCAVSLFLSMQENELKP-DSVSFLSVLSACRHAGLVEEGKRIFEEM 731
Query: 533 ---HIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYAL 589
H + H A V LL + GLF EA+ +R +++ V LL R+H L
Sbjct: 732 GERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWL 791
Query: 590 GKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTW 644
+ QL +LEPLN +Y + G+++ V +I++ AC+W
Sbjct: 792 SNAALCQLVKLEPLNPSHY----SQDRRLGEVNNVSRIKKV---------PACSW 833
Score = 204 bits (520), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 160/594 (26%), Positives = 269/594 (45%), Gaps = 51/594 (8%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
QVFDK D + WNT++ N A+ F M V A
Sbjct: 156 QVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLE 215
Query: 115 DFSLGKQLHTHAVK----LALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWT 170
+ + LH +K A SS LI +Y + D+ A+++F++ W
Sbjct: 216 KSDVCRCLHGLVIKKGFIFAFSS------GLIDMYCNCADLYAAESVFEEVWRKDESSWG 269
Query: 171 FLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKL 230
+ Y G LELF M +G L +G +H AV+
Sbjct: 270 TMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQ 329
Query: 231 GLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELF 290
GL G+V + SL+ MY CG + A +F + +DVVSW++MI Q G+ EA+ LF
Sbjct: 330 GLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLF 389
Query: 291 RRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYA 350
R M + +KP+ V +++VL C + + + G+ IH Y ++ +E ++ + ++ MYA
Sbjct: 390 RDM--MRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYA 447
Query: 351 DCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSIS 410
CG A FE++P K V++ ++ +GY + G N+ F +++ M G+ P + ++
Sbjct: 448 KCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGD-ANKAFDVYKNMKLHGVCPDSRTMV 506
Query: 411 SILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMN-E 469
+L C + + G ++G ++++G + + +V++A+I+M+ K A+A A+ +F + E
Sbjct: 507 GMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFE 566
Query: 470 KDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAP----LDDNIYAAA----------L 515
K T+SW++M+ G LHGQ + V FRQ++ P + + AAA +
Sbjct: 567 KSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSV 626
Query: 516 HA-------CSTAR-------------MFEEGRVCFNHIRGPMIAHCAQKVSLLARCGLF 555
H+ CS M E CF I I +S A GL
Sbjct: 627 HSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLA 686
Query: 556 DEAM-VFIREQKIEQHPEVLRKL--LEGCRIHGEYALGKQVIEQLCELEPLNAE 606
A+ +F+ Q+ E P+ + L L CR G GK++ E++ E + AE
Sbjct: 687 SCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAE 740
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/539 (24%), Positives = 234/539 (43%), Gaps = 17/539 (3%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRH-AVXXXXXXXXXXXXASRLAA 114
+FD + + WN++I + A+ F M + A +
Sbjct: 55 IFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSM 114
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
DF G ++H ++ L S + AL+ +Y D+ A+ +FDK W +
Sbjct: 115 DFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVS 174
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
G +AL LFH M + R +H + +K G
Sbjct: 175 GLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF-- 232
Query: 235 EVFA-SNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
+FA S+ L+ MY +C + A VFE++ KD SW +M+ NG E +ELF M
Sbjct: 233 -IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLM 291
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCG 353
V+ + V ++ L +G L G IH Y V+ G+ DV ++ +L+ MY+ CG
Sbjct: 292 --RNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCG 349
Query: 354 ASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSIL 413
A +F + + VVSW++MI Y ++ G ++E LFR M +KP AV+++S+L
Sbjct: 350 ELEIAEQLFINIEDRDVVSWSAMIASY-EQAGQHDEAISLFRDMMRIHIKPNAVTLTSVL 408
Query: 414 PACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTI 473
C +A+ + G+ IH Y ++ +E ++ + AVI MY K G + AL F + KD +
Sbjct: 409 QGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAV 468
Query: 474 SWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNH 533
+++ + G + G D+++ ++ + P D L C+ + G +
Sbjct: 469 AFNALAQGYTQIGDANKAFDVYKNMKLHGVCP-DSRTMVGMLQTCAFCSDYARGSCVYGQ 527
Query: 534 I------RGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGE 586
I +AH +++ +C A+V + E+ ++ G +HG+
Sbjct: 528 IIKHGFDSECHVAHAL--INMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQ 584
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 129/268 (48%), Gaps = 5/268 (1%)
Query: 240 NSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLS 299
N L+ Y +R++F+ + VV W SMIRG + G EA+ F M+ E
Sbjct: 37 NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEK-G 95
Query: 300 VKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDAR 359
+ PD + L C K G IH + G+E DV + L++MY AR
Sbjct: 96 IDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSAR 155
Query: 360 LVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRI 419
VF++M K VV+W +M+ G + + G ++ LF M S + VS+ +++PA ++
Sbjct: 156 QVFDKMHVKDVVTWNTMVSG-LAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKL 214
Query: 420 ASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMI 479
R +HG +++ G F S+ +IDMY + A +VF E+ KD SW M+
Sbjct: 215 EKSDVCRCLHGLVIKKG--FIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMM 272
Query: 480 FGCSLHGQGKLGVDLFRQLERNSEAPLD 507
+ +G + ++LF L RN + ++
Sbjct: 273 AAYAHNGFFEEVLELF-DLMRNYDVRMN 299
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 132/326 (40%), Gaps = 5/326 (1%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+ F++ P D +A+N L + A + M H V +
Sbjct: 457 KAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCS 516
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDC-WTFLA 173
D++ G ++ +K S H ALI+++ D +A A LFDK S W +
Sbjct: 517 DYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMM 576
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
Y+L G A+ F +M + +LR G VH ++ G
Sbjct: 577 NGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFC 636
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
+ NSL+ MY CG + + F ++ K +VSW +M+ +G S A+ LF M
Sbjct: 637 SQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSM 696
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYL-VRNGVECDVLLSNTLLKMYADC 352
L KPD V +VL C G ++ G+ I + R+ +E +V ++ +
Sbjct: 697 QENEL--KPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKA 754
Query: 353 GASRDARLVFEQMPSKTVVS-WTSMI 377
G +A + +M KT V W +++
Sbjct: 755 GLFGEAVEMMRRMRVKTSVGVWGALL 780
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 89/175 (50%), Gaps = 6/175 (3%)
Query: 325 EIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKG 384
++HG L+ +G++ N L+ Y+ +R++F+ + VV W SMIRGY +
Sbjct: 23 QVHGSLIVSGLK----PHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYT-RA 77
Query: 385 GFNNEVFRLFRKMNSE-GLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINV 443
G + E F M+ E G+ P S + L AC K G IH + G+E D+ +
Sbjct: 78 GLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYI 137
Query: 444 SNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQL 498
A+++MY K+ + A VF +M+ KD ++W+ M+ G + +G + LF +
Sbjct: 138 GTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDM 192
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 226 bits (575), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 170/638 (26%), Positives = 283/638 (44%), Gaps = 25/638 (3%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFP-LAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
+VFDK P + +++N L + N F A T M V +
Sbjct: 153 KVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVL 212
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
D +G L++ +KL S +++ +Y+S D+ A+ +FD + W +
Sbjct: 213 EDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMI 272
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
+ L F M+ +GS G+ +H +
Sbjct: 273 VGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSL 332
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
++ N+LL MY CG MR+A VF ++ ++VSW S+I GC +NG +AM ++RR+
Sbjct: 333 ADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRL 392
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCG 353
L + +PD S + HG+ +HG + + G E V + TLL MY
Sbjct: 393 -LRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNR 451
Query: 354 ASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEV-FRLFRKMNSEGLKPTAVSISSI 412
+ A+ VF+ M + VV WT MI G+ + G N+E+ + F +M E + S+SS+
Sbjct: 452 EAESAQKVFDVMKERDVVLWTEMIVGHSRLG--NSELAVQFFIEMYREKNRSDGFSLSSV 509
Query: 413 LPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDT 472
+ AC +A + G H +R G + ++V A++DMY K+G A +F + D
Sbjct: 510 IGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDL 569
Query: 473 ISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFN 532
W+ M+ S HG + + F Q+ N P D Y + L ACS +G+ +N
Sbjct: 570 KCWNSMLGAYSQHGMVEKALSFFEQILENGFMP-DAVTYLSLLAACSHRGSTLQGKFLWN 628
Query: 533 HIRGPMI----AHCAQKVSLLARCGLFDEAMVFIREQKIEQHP------EVLRKLLEGCR 582
++ I H + V+L+++ GL DEA+ + IEQ P E+ R LL C
Sbjct: 629 QMKEQGIKAGFKHYSCMVNLVSKAGLVDEAL-----ELIEQSPPGNNQAELWRTLLSACV 683
Query: 583 IHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKAC 642
+G EQ+ +L+P + ++LL N +A G+ + V ++R IR
Sbjct: 684 NTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGL 743
Query: 643 TWT-LYREKVHVFGTGDVSHPRKKEICSALQGFMEEMR 679
+W + VF +GD S+P E+ S Q + ++
Sbjct: 744 SWIEVNNNNTQVFSSGDQSNP---EVVSQAQDELNRLK 778
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 149/301 (49%), Gaps = 10/301 (3%)
Query: 237 FASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSW--TSMIRGCVQNGELSEAMELFRRMN 294
+A+N+L+ MYV C S+ AR VF+KMP +++V+ S + V G S ++ + +
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGS-SLHSQIIKLGS 81
Query: 295 LEGLSVKPDLVMVSTVLPV---CGMIGSLKHGREIHGYLVRNGVECDV---LLSNTLLKM 348
+ + P + S+V+ + C I LK R+IH ++ G +N L+ M
Sbjct: 82 FQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISM 141
Query: 349 YADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVS 408
Y CG+ AR VF++MP + VVS+ ++ Y + F + F L M E +KP + +
Sbjct: 142 YVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSST 201
Query: 409 ISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMN 468
+S++ C + G ++ +++ G ++ V +V+ MY G + A +F +N
Sbjct: 202 FTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVN 261
Query: 469 EKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGR 528
+D ++W+ MI G + + + G+ FR + + P Y+ L+ CS + G+
Sbjct: 262 NRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDP-TQFTYSIVLNGCSKLGSYSLGK 320
Query: 529 V 529
+
Sbjct: 321 L 321
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 225 bits (573), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 157/491 (31%), Positives = 238/491 (48%), Gaps = 51/491 (10%)
Query: 240 NSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLS 299
NSL+K Y++ G+ A VF +MP DV S+ MI G + G EA++L+ +M +G
Sbjct: 170 NSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDG-- 227
Query: 300 VKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNG--VECDVLLSNTLLKMYADC----- 352
++PD V ++L CG + ++ G+ +HG++ R G +++LSN LL MY C
Sbjct: 228 IEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGL 287
Query: 353 --------------------------GASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGF 386
G A+ VF+QMP + +VSW S++ GY KKG
Sbjct: 288 AKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCD 347
Query: 387 NNEVFRLFRKMN-SEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSN 445
V LF +M E +KP V++ S++ HGR +HG ++R ++ D +S+
Sbjct: 348 QRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSS 407
Query: 446 AVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAP 505
A+IDMY K G I A VF EKD W+ MI G + HG G+ + LF +++ P
Sbjct: 408 ALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTP 467
Query: 506 LDDNIYAAALHACSTARMFEEGRVCFNHIR-----GPMIAHCAQKVSLLARCGLFDEAMV 560
++ A L ACS + + EEG FNH++ P H V LL R G +EA
Sbjct: 468 -NNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKD 526
Query: 561 FIREQKIEQHP--EVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGK 618
+ ++K+ P + +L CR + + + +L +LEP YVLL N +A
Sbjct: 527 IV-QKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATV 585
Query: 619 GKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGD-VSHPRKKEICSALQGFMEE 677
G+ DK RE + RG+K + + E +H F + +HPR EI LQ E
Sbjct: 586 GRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNE 645
Query: 678 MRTEGVEPKWD 688
M+ PK D
Sbjct: 646 MK-----PKLD 651
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 189/441 (42%), Gaps = 45/441 (10%)
Query: 60 SPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAADFSLG 119
+P + +NT+I S+ + + ++ M+RH V AS ++
Sbjct: 95 TPNPNVFVYNTMISAVSSSKNECFGL--YSSMIRHRVSPDRQTFLYLMKASSFLSEV--- 149
Query: 120 KQLHTHA-VKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVL 178
KQ+H H V LS + +L+ Y L + VA+ +F + + + Y
Sbjct: 150 KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAK 209
Query: 179 EGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLG--LEGEV 236
+G AL+L+ +MV + +R G+ VH + G +
Sbjct: 210 QGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNL 269
Query: 237 FASNSLLKMYVDC-------------------------------GSMRDARLVFEKMPCK 265
SN+LL MY C G M A+ VF++MP +
Sbjct: 270 ILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKR 329
Query: 266 DVVSWTSMIRGCVQNG-ELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGR 324
D+VSW S++ G + G + ELF M + VKPD V + +++ G L HGR
Sbjct: 330 DLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVE-KVKPDRVTMVSLISGAANNGELSHGR 388
Query: 325 EIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKG 384
+HG ++R ++ D LS+ L+ MY CG A +VF+ K V WTSMI G G
Sbjct: 389 WVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHG 448
Query: 385 GFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVS 444
+ +LF +M EG+ P V++ ++L AC + G + + +++ FD
Sbjct: 449 N-GQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNH-MKDKFGFDPETE 506
Query: 445 N--AVIDMYVKSGAIACALNV 463
+ +++D+ ++G + A ++
Sbjct: 507 HYGSLVDLLCRAGRVEEAKDI 527
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 129/268 (48%), Gaps = 12/268 (4%)
Query: 255 ARLVFEKM-PCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPV 313
A+L+F P +V + +MI + +E L+ M V PD T L +
Sbjct: 87 AKLLFLNFTPNPNVFVYNTMISAV--SSSKNECFGLYSSMIRH--RVSPDR---QTFLYL 139
Query: 314 CGMIGSLKHGREIHGYLVRNG-VECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVS 372
L ++IH +++ +G + L N+L+K Y + G A VF +MP V S
Sbjct: 140 MKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSS 199
Query: 373 WTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYL 432
+ MI GY K+G F+ E +L+ KM S+G++P ++ S+L CG ++ + G+ +HG++
Sbjct: 200 FNVMIVGYAKQG-FSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWI 258
Query: 433 LRNGVEFDIN--VSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKL 490
R G + N +SNA++DMY K A F M +KD SW+ M+ G G +
Sbjct: 259 ERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEA 318
Query: 491 GVDLFRQLERNSEAPLDDNIYAAALHAC 518
+F Q+ + + ++ + C
Sbjct: 319 AQAVFDQMPKRDLVSWNSLLFGYSKKGC 346
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 132/292 (45%), Gaps = 14/292 (4%)
Query: 145 YASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGM-PRSALELFHRM-VXXXXXXXXX 202
+ L D+ AQ +FD+ W L Y +G R+ ELF+ M +
Sbjct: 310 FVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRV 369
Query: 203 XXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKM 262
G L GR VH + ++L L+G+ F S++L+ MY CG + A +VF+
Sbjct: 370 TMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTA 429
Query: 263 PCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKH 322
KDV WTSMI G +G +A++LF RM EG V P+ V + VL C G ++
Sbjct: 430 TEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEG--VTPNNVTLLAVLTACSHSGLVEE 487
Query: 323 GREIHGYLV-RNGVECDVLLSNTLLKMYADCGASRDAR-LVFEQMPSKTVVS-WTSMIRG 379
G + ++ + G + + +L+ + G +A+ +V ++MP + S W S++
Sbjct: 488 GLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSA 547
Query: 380 YVKKGGFNNEVFRL----FRKMNSEGLKPTAVSISSILPACGRIASHKHGRE 427
+GG + E L K+ E + V +S+I GR RE
Sbjct: 548 C--RGGEDIETAELALTELLKLEPEK-EGGYVLLSNIYATVGRWGYSDKTRE 596
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 108/279 (38%), Gaps = 13/279 (4%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAI-STFTQM-LRHAVXXXXXXXXXXXXASRLA 113
VFD+ P+ D ++WN+L+ + + F +M + V +
Sbjct: 322 VFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANN 381
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
+ S G+ +H ++L L A ALI +Y I A +F WT +
Sbjct: 382 GELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMI 441
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDV-HLIAVKLGL 232
G + AL+LF RM G + +G V + + K G
Sbjct: 442 TGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGF 501
Query: 233 EGEVFASNSLLKMYVDCGSMRDAR-LVFEKMPCKDVVS-WTSMIRGCVQNGELSEAMELF 290
+ E SL+ + G + +A+ +V +KMP + S W S++ C + GE E EL
Sbjct: 502 DPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSAC-RGGEDIETAELA 560
Query: 291 RRMNLEGLSVKPD----LVMVSTVLPVCGMIGSLKHGRE 325
E L ++P+ V++S + G G RE
Sbjct: 561 LT---ELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTRE 596
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 224 bits (572), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 149/469 (31%), Positives = 233/469 (49%), Gaps = 14/469 (2%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXX--XXXASRL 112
+VFD PE +T+ W +I +L A + F ++H + SR
Sbjct: 138 KVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSR- 196
Query: 113 AADFSLGKQLHTHAVKLALSSRAHTLI---ALIHLYASLDDIAVAQTLFDKTAPFGSDCW 169
A+F LG+Q+H + VK+ + + LI +L++ YA ++ A FD W
Sbjct: 197 RAEFELGRQVHGNMVKVGVGN----LIVESSLVYFYAQCGELTSALRAFDMMEEKDVISW 252
Query: 170 TFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVK 229
T + +G A+ +F M+ +LR GR VH + VK
Sbjct: 253 TAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVK 312
Query: 230 LGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMEL 289
++ +VF SL+ MY CG + D R VF+ M ++ V+WTS+I + G EA+ L
Sbjct: 313 RMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISL 372
Query: 290 FRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMY 349
FR M L + +L +VS +L CG +G+L G+E+H +++N +E +V + +TL+ +Y
Sbjct: 373 FRIMKRRHL-IANNLTVVS-ILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLY 430
Query: 350 ADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSI 409
CG SRDA V +Q+PS+ VVSWT+MI G G +E ++M EG++P +
Sbjct: 431 CKCGESRDAFNVLQQLPSRDVVSWTAMISG-CSSLGHESEALDFLKEMIQEGVEPNPFTY 489
Query: 410 SSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNE 469
SS L AC S GR IH +N ++ V +A+I MY K G ++ A VF M E
Sbjct: 490 SSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPE 549
Query: 470 KDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHAC 518
K+ +SW MI G + +G + + L ++E +DD I+A L C
Sbjct: 550 KNLVSWKAMIMGYARNGFCREALKLMYRMEAEG-FEVDDYIFATILSTC 597
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 211/448 (47%), Gaps = 12/448 (2%)
Query: 118 LGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYV 177
L K++H A+K + LI L D+ A+ +FD + WT + Y+
Sbjct: 100 LIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYL 159
Query: 178 LEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXX-XMMGSLRQGRDVHLIAVKLGLEGEV 236
G+ A LF V GR VH VK+G+ G +
Sbjct: 160 KYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNL 218
Query: 237 FASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLE 296
+SL+ Y CG + A F+ M KDV+SWT++I C + G +A+ +F + +
Sbjct: 219 IVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMF--IGML 276
Query: 297 GLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASR 356
P+ V ++L C +L+ GR++H +V+ ++ DV + +L+ MYA CG
Sbjct: 277 NHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEIS 336
Query: 357 DARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPAC 416
D R VF+ M ++ V+WTS+I + ++G F E LFR M L +++ SIL AC
Sbjct: 337 DCRKVFDGMSNRNTVTWTSIIAAHAREG-FGEEAISLFRIMKRRHLIANNLTVVSILRAC 395
Query: 417 GRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWS 476
G + + G+E+H +++N +E ++ + + ++ +Y K G A NV ++ +D +SW+
Sbjct: 396 GSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWT 455
Query: 477 MMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCF----- 531
MI GCS G +D +++ + P + Y++AL AC+ + GR
Sbjct: 456 AMISGCSSLGHESEALDFLKEMIQEGVEP-NPFTYSSALKACANSESLLIGRSIHSIAKK 514
Query: 532 NHIRGPMIAHCAQKVSLLARCGLFDEAM 559
NH + A + + A+CG EA
Sbjct: 515 NHALSNVFVGSAL-IHMYAKCGFVSEAF 541
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 154/284 (54%), Gaps = 3/284 (1%)
Query: 217 LRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRG 276
+R + +H +A+K + ++ N+L+ V G + AR VF+ MP K+ V+WT+MI G
Sbjct: 98 MRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDG 157
Query: 277 CVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVE 336
++ G EA LF G+ + + V +L +C + GR++HG +V+ GV
Sbjct: 158 YLKYGLEDEAFALFEDYVKHGIRFTNERMFV-CLLNLCSRRAEFELGRQVHGNMVKVGVG 216
Query: 337 CDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRK 396
++++ ++L+ YA CG A F+ M K V+SWT++I +K G + +F
Sbjct: 217 -NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRK-GHGIKAIGMFIG 274
Query: 397 MNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGA 456
M + P ++ SIL AC + + GR++H +++ ++ D+ V +++DMY K G
Sbjct: 275 MLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGE 334
Query: 457 IACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLER 500
I+ VF M+ ++T++W+ +I + G G+ + LFR ++R
Sbjct: 335 ISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKR 378
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 107/263 (40%), Gaps = 2/263 (0%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VFD +T+ W ++I H AIS F M R + A
Sbjct: 340 KVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVG 399
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
LGK+LH +K ++ + L+ LY + A + + WT +
Sbjct: 400 ALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMIS 459
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
G AL+ M+ SL GR +H IA K
Sbjct: 460 GCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALS 519
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
VF ++L+ MY CG + +A VF+ MP K++VSW +MI G +NG EA++L RM
Sbjct: 520 NVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRME 579
Query: 295 LEGLSVKPDLVMVSTVLPVCGMI 317
EG V D + +T+L CG I
Sbjct: 580 AEGFEV--DDYIFATILSTCGDI 600
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 223 bits (567), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 157/538 (29%), Positives = 249/538 (46%), Gaps = 14/538 (2%)
Query: 109 ASRLAADFSLGKQL---HTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFG 165
A +L + ++ KQL H +++ S LI LY D+ A+ LFD+ +
Sbjct: 18 ALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRD 77
Query: 166 SDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHL 225
WT + + G AL LF M +G L++G +H
Sbjct: 78 VVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHG 137
Query: 226 IAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSE 285
K G + ++LL +Y CG M +ARL F+ M +D+VSW +MI G N
Sbjct: 138 SVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADT 197
Query: 286 AMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTL 345
+ LF+ M EG KPD ++L ++ L+ E+HG ++ G L +L
Sbjct: 198 SFSLFQLMLTEG--KKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSL 255
Query: 346 LKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPT 405
+ Y CG+ +A + E + ++S T++I G+ ++ ++ F +F+ M K
Sbjct: 256 VNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMD 315
Query: 406 AVSISSILPACGRIASHKHGREIHGYLLRNG-VEFDINVSNAVIDMYVKSGAIACALNVF 464
V +SS+L C IAS GR+IHG+ L++ + FD+ + N++IDMY KSG I A+ F
Sbjct: 316 EVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAF 375
Query: 465 GEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMF 524
EM EKD SW+ +I G HG + +DL+ ++E P +D + + L ACS
Sbjct: 376 EEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKP-NDVTFLSLLSACSHTGQT 434
Query: 525 EEGRVCFN-----HIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQK--IEQHPEVLRKL 577
E G ++ H H + + +LAR G +EA IR ++ +
Sbjct: 435 ELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAF 494
Query: 578 LEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERG 635
L+ CR HG L K QL +EP NY+ L + +A G D R+ ++E G
Sbjct: 495 LDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESG 552
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 222/493 (45%), Gaps = 23/493 (4%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
++FD+ + D ++W +I + P A+ F +M R V + +
Sbjct: 68 KLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLG 127
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
G Q+H K + AL+ LYA + A+ FD W +
Sbjct: 128 CLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMID 187
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
Y ++ LF M+ ++ L ++H +A+KLG
Sbjct: 188 GYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGR 247
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRG-CVQNGELSEAMELFRRM 293
SL+ YV CGS+ +A + E +D++S T++I G QN S+A ++F+ M
Sbjct: 248 SSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDM 307
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNG-VECDVLLSNTLLKMYADC 352
+ K D V+VS++L +C I S+ GR+IHG+ +++ + DV L N+L+ MYA
Sbjct: 308 --IRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKS 365
Query: 353 GASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSI 412
G DA L FE+M K V SWTS+I GY + G F + L+ +M E +KP V+ S+
Sbjct: 366 GEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAI-DLYNRMEHERIKPNDVTFLSL 424
Query: 413 LPACGRIASHKHGREIHGYLL-RNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKD 471
L AC + G +I+ ++ ++G+E + +IDM +SG + A + + K+
Sbjct: 425 LSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEA---YALIRSKE 481
Query: 472 TI------SWSMMIFGCSLHGQGKLG-VDLFRQLERNSEAPLD----DNIYAAA---LHA 517
I +W + C HG +L V + L P++ ++YAA +A
Sbjct: 482 GIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNA 541
Query: 518 CSTARMFEEGRVC 530
+T ++ +E C
Sbjct: 542 LNTRKLMKESGSC 554
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 157/588 (26%), Positives = 260/588 (44%), Gaps = 16/588 (2%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
+FD+ PE DT+ WN LI + N + A F ML+
Sbjct: 105 QMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQC 164
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
S G+ +H A K L + ALI Y+ ++ A+ LF + + W +
Sbjct: 165 GFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMI 224
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
Y G+ A+ +F M ++ + +H + VK G+
Sbjct: 225 GAYSQSGLQEEAITVFKNMFEKNVEISPVTIIN------LLSAHVSHEPLHCLVVKCGMV 278
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
++ SL+ Y CG + A ++ +V TS++ + G++ A+ F +
Sbjct: 279 NDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKT 338
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCG 353
L +K D V + +L C + G +HGY +++G+ L+ N L+ MY+
Sbjct: 339 --RQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFD 396
Query: 354 ASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMN-SEGLKPTAVSISSI 412
+FEQ+ ++SW S+I G V+ G + F +F +M + GL P A++I+S+
Sbjct: 397 DVETVLFLFEQLQETPLISWNSVISGCVQSGR-ASTAFEVFHQMMLTGGLLPDAITIASL 455
Query: 413 LPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDT 472
L C ++ G+E+HGY LRN E + V A+IDMY K G A +VF + T
Sbjct: 456 LAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCT 515
Query: 473 ISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFN 532
+W+ MI G SL G + + ++ P D+ + L AC+ +EG++CF
Sbjct: 516 ATWNSMISGYSLSGLQHRALSCYLEMREKGLKP-DEITFLGVLSACNHGGFVDEGKICFR 574
Query: 533 HI-----RGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEY 587
+ P + H A V LL R LF EA+ I + I+ V LL C IH E
Sbjct: 575 AMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHREL 634
Query: 588 ALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERG 635
+G+ V ++ L+ N YVL+ N +A + D V ++R +++ G
Sbjct: 635 EVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNG 682
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 196/450 (43%), Gaps = 15/450 (3%)
Query: 72 IHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAAD-FSLG-KQLHTHAVKL 129
IH +S++ I+ F +LR ++ A+ + + F L +Q+ TH K
Sbjct: 24 IHGEISSS----PITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKS 79
Query: 130 ALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELF 189
L + +L++LY + AQ LFD+ + W L Y G A +LF
Sbjct: 80 GLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLF 139
Query: 190 HRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDC 249
M+ G + QGR VH +A K GLE + N+L+ Y C
Sbjct: 140 IVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKC 199
Query: 250 GSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVST 309
+ A ++F +M K VSW +MI Q+G EA+ +F+ M + + + P
Sbjct: 200 AELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISP------- 252
Query: 310 VLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKT 369
+ + ++ + +H +V+ G+ D+ + +L+ Y+ CG A ++ +
Sbjct: 253 -VTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDS 311
Query: 370 VVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIH 429
+V TS++ Y +KG + V F K +K AV++ IL C + + G +H
Sbjct: 312 IVGLTSIVSCYAEKGDMDIAVVY-FSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLH 370
Query: 430 GYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGK 489
GY +++G+ V N +I MY K + L +F ++ E ISW+ +I GC G+
Sbjct: 371 GYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRAS 430
Query: 490 LGVDLFRQLERNSEAPLDDNIYAAALHACS 519
++F Q+ D A+ L CS
Sbjct: 431 TAFEVFHQMMLTGGLLPDAITIASLLAGCS 460
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 173/382 (45%), Gaps = 13/382 (3%)
Query: 219 QGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCV 278
Q V K GL+ V+ SLL +Y+ G + A+++F++MP +D V W ++I G
Sbjct: 68 QVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYS 127
Query: 279 QNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECD 338
+NG +A +LF M +G S P + +LP CG G + GR +HG ++G+E D
Sbjct: 128 RNGYECDAWKLFIVMLQQGFS--PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELD 185
Query: 339 VLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMN 398
+ N L+ Y+ C A ++F +M K+ VSW +MI Y + G E +F+ M
Sbjct: 186 SQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAY-SQSGLQEEAITVFKNMF 244
Query: 399 SEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIA 458
+ ++ + V+I ++L A H +H +++ G+ DI+V +++ Y + G +
Sbjct: 245 EKNVEISPVTIINLLSA------HVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLV 298
Query: 459 CALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHAC 518
A ++ + + + ++ + G + V F + R +D LH C
Sbjct: 299 SAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSK-TRQLCMKIDAVALVGILHGC 357
Query: 519 STARMFEEGRVCFNH-IRGPMIAHCAQKVSLLARCGLFD--EAMVFIREQKIEQHPEVLR 575
+ + G + I+ + L+ FD E ++F+ EQ E
Sbjct: 358 KKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWN 417
Query: 576 KLLEGCRIHGEYALGKQVIEQL 597
++ GC G + +V Q+
Sbjct: 418 SVISGCVQSGRASTAFEVFHQM 439
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 160/671 (23%), Positives = 297/671 (44%), Gaps = 49/671 (7%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXX-XASRL 112
+ FD + D ++WN +I NN A +F ML+ + +
Sbjct: 178 YTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASM 237
Query: 113 AADFSL--GKQLHTHAVKLA-LSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCW 169
+ + G+Q+H++ V+ + L + +L+ Y + I A +LF + W
Sbjct: 238 DKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSW 297
Query: 170 TFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXX-XMMGSLRQGRDVHLIAV 228
+ Y A +LFH +V + L G+++H +
Sbjct: 298 NVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYIL 357
Query: 229 KLG-LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAM 287
+ L + N+L+ Y G A F M KD++SW +++ + + + +
Sbjct: 358 RHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFL 417
Query: 288 ELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGV---ECDVLLSNT 344
L + E +++ D V + ++L C + + +E+HGY V+ G+ E + L N
Sbjct: 418 NLLHHLLNEAITL--DSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNA 475
Query: 345 LLKMYADCGASRDARLVFEQMPSK-TVVSWTSMIRGYVKKGGFN---------------- 387
LL YA CG A +F + + T+VS+ S++ GYV G +
Sbjct: 476 LLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTT 535
Query: 388 --------------NEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLL 433
NE +FR++ + G++P V+I ++LP C ++AS R+ HGY++
Sbjct: 536 WSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYII 595
Query: 434 RNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVD 493
R G+ DI + ++D+Y K G++ A +VF +D + ++ M+ G ++HG+GK +
Sbjct: 596 RGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALM 654
Query: 494 LFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSL 548
++ + ++ P D L AC A + ++G ++ IR P + A V L
Sbjct: 655 IYSHMTESNIKP-DHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDL 713
Query: 549 LARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENY 608
+AR G D+A F+ + +E + + LL C + LG V L + E + N+
Sbjct: 714 IARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNH 773
Query: 609 VLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEIC 668
VL+ N +A K + V ++R ++++ +K C+W + +VF +GD SHPR+ I
Sbjct: 774 VLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIF 833
Query: 669 SALQGFMEEMR 679
+ +M+
Sbjct: 834 DLVNALYLQMK 844
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 160/327 (48%), Gaps = 10/327 (3%)
Query: 214 MGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSM 273
+ L GR +H KLG S S+L MY C M D + +F +M D V W +
Sbjct: 34 VSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIV 93
Query: 274 IRG-CVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVR 332
+ G V G E M F+ M+ KP V + VLP+C +G +G+ +H Y+++
Sbjct: 94 LTGLSVSCGR--ETMRFFKAMHFAD-EPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIK 150
Query: 333 NGVECDVLLSNTLLKMYADCG-ASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVF 391
G+E D L+ N L+ MYA G DA F+ + K VVSW ++I G+ + + F
Sbjct: 151 AGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGF-SENNMMADAF 209
Query: 392 RLFRKMNSEGLKPTAVSISSILPACGRIASH---KHGREIHGYLL-RNGVEFDINVSNAV 447
R F M E +P +I+++LP C + + + GR+IH Y++ R+ ++ + V N++
Sbjct: 210 RSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSL 269
Query: 448 IDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLD 507
+ Y++ G I A ++F M KD +SW+++I G + + + LF L + D
Sbjct: 270 VSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPD 329
Query: 508 DNIYAAALHACSTARMFEEGRVCFNHI 534
+ L C+ G+ ++I
Sbjct: 330 SVTIISILPVCAQLTDLASGKEIHSYI 356
Score = 136 bits (343), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 172/373 (46%), Gaps = 12/373 (3%)
Query: 119 GKQLHTHAVKLALSSRAHTLIALIHLYASLDDI-AVAQTLFDKTAPFGSDCWTFLAKLYV 177
GK +H++ +K L AL+ +YA I A T FD A W + +
Sbjct: 141 GKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFS 200
Query: 178 LEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMG---SLRQGRDVHLIAVKLG-LE 233
M A F M+ M + R GR +H V+ L+
Sbjct: 201 ENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQ 260
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
VF NSL+ Y+ G + +A +F +M KD+VSW +I G N E +A +LF +
Sbjct: 261 THVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNL 320
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVEC-DVLLSNTLLKMYADC 352
+G V PD V + ++LPVC + L G+EIH Y++R+ D + N L+ YA
Sbjct: 321 VHKG-DVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARF 379
Query: 353 GASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSI 412
G + A F M +K ++SW +++ + + L + +E + +V+I S+
Sbjct: 380 GDTSAAYWAFSLMSTKDIISWNAILDAFADSPK-QFQFLNLLHHLLNEAITLDSVTILSL 438
Query: 413 LPACGRIASHKHGREIHGYLLRNGV---EFDINVSNAVIDMYVKSGAIACALNVFGEMNE 469
L C + +E+HGY ++ G+ E + + NA++D Y K G + A +F ++E
Sbjct: 439 LKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSE 498
Query: 470 KDT-ISWSMMIFG 481
+ T +S++ ++ G
Sbjct: 499 RRTLVSYNSLLSG 511
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 125/262 (47%), Gaps = 19/262 (7%)
Query: 310 VLPVCGMIGSLKHGREIHGYLVRNG-VECDVLLSNTLLKMYADCGASRDARLVFEQMPSK 368
V+ C + L GR +HG + + G + C + S ++L MYA C D + +F QM S
Sbjct: 27 VVKACASVSDLTSGRALHGCVFKLGHIACSEV-SKSVLNMYAKCRRMDDCQKMFRQMDSL 85
Query: 369 TVVSWTSMIRGYVKKGGFNNEVFRLFRKMN-SEGLKPTAVSISSILPACGRIASHKHGRE 427
V W ++ G G E R F+ M+ ++ KP++V+ + +LP C R+ +G+
Sbjct: 86 DPVVWNIVLTGLSVSCG--RETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKS 143
Query: 428 IHGYLLRNGVEFDINVSNAVIDMYVKSGAI-ACALNVFGEMNEKDTISWSMMIFGCSLHG 486
+H Y+++ G+E D V NA++ MY K G I A F + +KD +SW+ +I G S
Sbjct: 144 MHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFS--- 200
Query: 487 QGKLGVDLFRQLERNSEAPLDDN--IYAAALHACSTAR---MFEEGRVCFNHI--RGPMI 539
+ + D FR + P + N A L C++ GR +++ R +
Sbjct: 201 ENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQ 260
Query: 540 AH---CAQKVSLLARCGLFDEA 558
H C VS R G +EA
Sbjct: 261 THVFVCNSLVSFYLRVGRIEEA 282
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 220 bits (561), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/430 (31%), Positives = 226/430 (52%), Gaps = 10/430 (2%)
Query: 214 MGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSM 273
+G L G +H +A+K GL+ + + + SL++MY G+M A+ VF+++P ++ V W +
Sbjct: 122 LGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVL 181
Query: 274 IRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN 333
++G ++ + E LF M GL++ D + + ++ CG + + K G+ +HG +R
Sbjct: 182 MKGYLKYSKDPEVFRLFCLMRDTGLAL--DALTLICLVKACGNVFAGKVGKCVHGVSIRR 239
Query: 334 G-VECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFR 392
++ L +++ MY C +AR +FE + VV WT++I G+ K E F
Sbjct: 240 SFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAK-CERAVEAFD 298
Query: 393 LFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYV 452
LFR+M E + P ++++IL +C + S +HG+ +HGY++RNG+E D + IDMY
Sbjct: 299 LFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYA 358
Query: 453 KSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYA 512
+ G I A VF M E++ ISWS MI ++G + +D F +++ + P + +
Sbjct: 359 RCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVP-NSVTFV 417
Query: 513 AALHACSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKI 567
+ L ACS + +EG F + P H A V LL R G EA FI +
Sbjct: 418 SLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPV 477
Query: 568 EQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKI 627
+ LL CRIH E L ++ E+L +EP + YVLL N +A G +MV+ +
Sbjct: 478 KPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCV 537
Query: 628 RETIRERGLK 637
R + +G +
Sbjct: 538 RRKMGIKGYR 547
Score = 174 bits (440), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 219/470 (46%), Gaps = 15/470 (3%)
Query: 57 FDKSPEW--DTLAWNTLIHTHLSNNH--FPLAISTFTQMLRHAVXXXXXXXXXXXXASRL 112
F++ P W + +WNT++ + + + + + +M RH A
Sbjct: 62 FNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVG 121
Query: 113 AADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFL 172
G +H A+K L + +L+ +YA L + AQ +FD+ S W L
Sbjct: 122 LGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVL 181
Query: 173 AKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLG- 231
K Y+ LF M + + + G+ VH ++++
Sbjct: 182 MKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSF 241
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFR 291
++ + S++ MYV C + +AR +FE ++VV WT++I G + EA +LFR
Sbjct: 242 IDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFR 301
Query: 292 RMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYAD 351
+M E S+ P+ ++ +L C +GSL+HG+ +HGY++RNG+E D + + + MYA
Sbjct: 302 QMLRE--SILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYAR 359
Query: 352 CGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISS 411
CG + AR VF+ MP + V+SW+SMI + G F E F KM S+ + P +V+ S
Sbjct: 360 CGNIQMARTVFDMMPERNVISWSSMINAFGINGLF-EEALDCFHKMKSQNVVPNSVTFVS 418
Query: 412 ILPACGRIASHKHGREIHGYLLRN-GVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK 470
+L AC + K G + + R+ GV + ++D+ ++G I A + M K
Sbjct: 419 LLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVK 478
Query: 471 DTIS-WSMMIFGCSLHGQGKLGVDLFRQL-----ERNSEAPLDDNIYAAA 514
S W ++ C +H + L ++ +L E++S L NIYA A
Sbjct: 479 PMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADA 528
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 174/351 (49%), Gaps = 21/351 (5%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPC--KDVVSWTSM 273
+L + VH + G E EV +SL Y+ + A F ++PC ++ SW ++
Sbjct: 19 TLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTI 78
Query: 274 IRGCVQNGE--LSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLV 331
+ G ++ S+ + L+ RM V D + + C +G L++G IHG +
Sbjct: 79 LSGYSKSKTCCYSDVLLLYNRMRRHCDGV--DSFNLVFAIKACVGLGLLENGILIHGLAM 136
Query: 332 RNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVF 391
+NG++ D ++ +L++MYA G A+ VF+++P + V W +++GY+K + EVF
Sbjct: 137 KNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSK-DPEVF 195
Query: 392 RLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNG-VEFDINVSNAVIDM 450
RLF M GL A+++ ++ ACG + + K G+ +HG +R ++ + ++IDM
Sbjct: 196 RLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDM 255
Query: 451 YVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNI 510
YVK + A +F +++ + W+ +I G + + DLFRQ+ R S P +
Sbjct: 256 YVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILP-NQCT 314
Query: 511 YAAALHACSTARMFEEGRVCFNHIRGPMIAHCAQK--------VSLLARCG 553
AA L +CS+ G+ + G MI + + + + ARCG
Sbjct: 315 LAAILVSCSSLGSLRHGK----SVHGYMIRNGIEMDAVNFTSFIDMYARCG 361
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 144/327 (44%), Gaps = 5/327 (1%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
+VFD+ P +++ W L+ +L + P F M + A
Sbjct: 164 QKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNV 223
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIA-LIHLYASLDDIAVAQTLFDKTAPFGSDCWTFL 172
+GK +H +++ + ++ L A +I +Y + A+ LF+ + WT L
Sbjct: 224 FAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTL 283
Query: 173 AKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL 232
+ A +LF +M+ +GSLR G+ VH ++ G+
Sbjct: 284 ISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGI 343
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
E + S + MY CG+++ AR VF+ MP ++V+SW+SMI NG EA++ F +
Sbjct: 344 EMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHK 403
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN-GVECDVLLSNTLLKMYAD 351
M + +V P+ V ++L C G++K G + + R+ GV + ++ +
Sbjct: 404 MKSQ--NVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGR 461
Query: 352 CGASRDARLVFEQMPSKTVVS-WTSMI 377
G +A+ + MP K + S W +++
Sbjct: 462 AGEIGEAKSFIDNMPVKPMASAWGALL 488
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 126/280 (45%), Gaps = 10/280 (3%)
Query: 309 TVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMP-- 366
+L + +L H +++H ++ +G E +V+L ++L Y A F ++P
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 367 SKTVVSWTSMIRGYVK-KGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHG 425
+ SW +++ GY K K ++V L+ +M + ++ + AC + ++G
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 426 REIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLH 485
IHG ++NG++ D V+ ++++MY + G + A VF E+ ++++ W +++ G +
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKY 188
Query: 486 GQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFN-HIRGPMIAHC-- 542
+ LF L R++ LD + AC + G+ IR I
Sbjct: 189 SKDPEVFRLF-CLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDY 247
Query: 543 --AQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEG 580
A + + +C L D A E ++++ + L+ G
Sbjct: 248 LQASIIDMYVKCRLLDNARKLF-ETSVDRNVVMWTTLISG 286
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 115/284 (40%), Gaps = 13/284 (4%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
++F+ S + + + W TLI A F QMLR ++ +
Sbjct: 267 KLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLG 326
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
GK +H + ++ + A + I +YA +I +A+T+FD W+ +
Sbjct: 327 SLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMIN 386
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQG-RDVHLIAVKLGLE 233
+ + G+ AL+ FH+M G++++G + + G+
Sbjct: 387 AFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVV 446
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVS-WTSMIRGCVQNGELSEAMELFRR 292
E ++ + G + +A+ + MP K + S W +++ C + E+ A E+ +
Sbjct: 447 PEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEK 506
Query: 293 MNLEGLSVKPD----LVMVSTVLPVCG---MIGSLKHGREIHGY 329
+ LS++P+ V++S + G M+ ++ I GY
Sbjct: 507 L----LSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGY 546
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 217 bits (552), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 154/567 (27%), Positives = 260/567 (45%), Gaps = 12/567 (2%)
Query: 122 LHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGM 181
LH AV + ++++LY D + A+ LFD+ W + Y G
Sbjct: 166 LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGN 225
Query: 182 PRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNS 241
L+L +RM M L GR +H VK G + ++ +
Sbjct: 226 MSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTA 285
Query: 242 LLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVK 301
L+ MY+ CG + V E +P KDVV WT MI G ++ G +A+ +F M G +
Sbjct: 286 LITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLS 345
Query: 302 PDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLV 361
+ +++V+ C +GS G +HGY++R+G D N+L+ MYA CG + ++
Sbjct: 346 SE--AIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVI 403
Query: 362 FEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPT-AVSISSILPACGRIA 420
FE+M + +VSW ++I GY + + LF +M + ++ + ++ S+L AC
Sbjct: 404 FERMNERDLVSWNAIISGYAQNVDLCKALL-LFEEMKFKTVQQVDSFTVVSLLQACSSAG 462
Query: 421 SHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIF 480
+ G+ IH ++R+ + V A++DMY K G + A F ++ KD +SW ++I
Sbjct: 463 ALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIA 522
Query: 481 GCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNH-IRG--- 536
G HG+G + ++++ + + P + I+ A L +CS M ++G F+ +R
Sbjct: 523 GYGFHGKGDIALEIYSEFLHSGMEP-NHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGV 581
Query: 537 -PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIE 595
P H A V LL R ++A F +E +VL +L+ CR +G+ + + E
Sbjct: 582 EPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICE 641
Query: 596 QLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFG 655
+ EL+P +A +YV L + A + D V + +R GLK + K F
Sbjct: 642 DMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFF 701
Query: 656 TGDVSHPRKKEICSALQGFMEEMRTEG 682
SH + S L+ EM G
Sbjct: 702 MNHTSH--SDDTVSLLKLLSREMMQFG 726
Score = 196 bits (497), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 230/496 (46%), Gaps = 16/496 (3%)
Query: 65 TLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAADFSLGKQLHT 124
T +N+ I+ S+ +STF+ ML + + A S G +H
Sbjct: 11 TKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQ 70
Query: 125 HAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRS 184
+ SS + +L++LYA +A A+ +F++ WT + Y G+
Sbjct: 71 QVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGE 130
Query: 185 ALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLK 244
A L + M + Q + +H AV G + ++ NS+L
Sbjct: 131 ACSLVNEMRFQGIKPGPVTLLEMLSGVL---EITQLQCLHDFAVIYGFDCDIAVMNSMLN 187
Query: 245 MYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDL 304
+Y C + DA+ +F++M +D+VSW +MI G G +SE ++L RM +GL +PD
Sbjct: 188 LYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGL--RPDQ 245
Query: 305 VMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQ 364
L V G + L+ GR +H +V+ G + D+ L L+ MY CG + V E
Sbjct: 246 QTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLET 305
Query: 365 MPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKH 424
+P+K VV WT MI G ++ G + +F +M G ++ +I+S++ +C ++ S
Sbjct: 306 IPNKDVVCWTVMISGLMRLGRAEKALI-VFSEMLQSGSDLSSEAIASVVASCAQLGSFDL 364
Query: 425 GREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSL 484
G +HGY+LR+G D N++I MY K G + +L +F MNE+D +SW+ +I G +
Sbjct: 365 GASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQ 424
Query: 485 HGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRGPMIAHCAQ 544
+ + LF +++ + +D + L ACS+A G+ + HC
Sbjct: 425 NVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGK----------LIHCIV 474
Query: 545 KVSLLARCGLFDEAMV 560
S + C L D A+V
Sbjct: 475 IRSFIRPCSLVDTALV 490
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 183/422 (43%), Gaps = 9/422 (2%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAAD 115
+FD+ + D ++WNT+I + S + + +M + S D
Sbjct: 201 LFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCD 260
Query: 116 FSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKL 175
+G+ LH VK H ALI +Y + + + CWT +
Sbjct: 261 LEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISG 320
Query: 176 YVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGE 235
+ G AL +F M+ +GS G VH ++ G +
Sbjct: 321 LMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLD 380
Query: 236 VFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNL 295
A NSL+ MY CG + + ++FE+M +D+VSW ++I G QN +L +A+ LF M
Sbjct: 381 TPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKF 440
Query: 296 EGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGAS 355
+ + + D V ++L C G+L G+ IH ++R+ + L+ L+ MY+ CG
Sbjct: 441 KTVQ-QVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYL 499
Query: 356 RDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNE---VFRLFRKMNSEGLKPTAVSISSI 412
A+ F+ + K VVSW +I GY GF+ + ++ + G++P V ++
Sbjct: 500 EAAQRCFDSISWKDVVSWGILIAGY----GFHGKGDIALEIYSEFLHSGMEPNHVIFLAV 555
Query: 413 LPACGRIASHKHGREIHGYLLRN-GVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKD 471
L +C + G +I ++R+ GVE + V+D+ ++ I A + E +
Sbjct: 556 LSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRP 615
Query: 472 TI 473
+I
Sbjct: 616 SI 617
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 114/285 (40%), Gaps = 4/285 (1%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
++V + P D + W +I + A+ F++ML+ +
Sbjct: 300 YRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQL 359
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
F LG +H + ++ + L +LI +YA + + +F++ W +
Sbjct: 360 GSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAII 419
Query: 174 KLYVLEGMPRSALELFHRM-VXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL 232
Y AL LF M G+L G+ +H I ++ +
Sbjct: 420 SGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFI 479
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
+L+ MY CG + A+ F+ + KDVVSW +I G +G+ A+E++
Sbjct: 480 RPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSE 539
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN-GVE 336
G+ +P+ V+ VL C G ++ G +I +VR+ GVE
Sbjct: 540 FLHSGM--EPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVE 582
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 216 bits (549), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 137/447 (30%), Positives = 230/447 (51%), Gaps = 25/447 (5%)
Query: 242 LLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVK 301
L M G + A VF +M K+VV WTSMI G + N +L A F LS +
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYF------DLSPE 87
Query: 302 PDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVEC-DVLLSNTLLKMYADCGASRDARL 360
D+V+ +T++ G ++ G + + + + C DV+ NT+L+ YA+ G
Sbjct: 88 RDIVLWNTMIS-----GYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACER 142
Query: 361 VFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEG-LKPTAVSISSILPACGRI 419
VF+ MP + V SW +I+GY + G + EV F++M EG + P +++ +L AC ++
Sbjct: 143 VFDDMPERNVFSWNGLIKGYAQNGRVS-EVLGSFKRMVDEGSVVPNDATMTLVLSACAKL 201
Query: 420 ASHKHGREIHGYLLRNGV-EFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMM 478
+ G+ +H Y G + D+NV NA+IDMY K GAI A+ VF + +D ISW+ M
Sbjct: 202 GAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTM 261
Query: 479 IFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG-- 536
I G + HG G ++LF +++ + +P D + L AC + E+G FN +
Sbjct: 262 INGLAAHGHGTEALNLFHEMKNSGISP-DKVTFVGVLCACKHMGLVEDGLAYFNSMFTDF 320
Query: 537 ---PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQV 593
P I HC V LL+R G +A+ FI + ++ + LL +++ + +G+
Sbjct: 321 SIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVA 380
Query: 594 IEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHV 653
+E+L +LEP N N+V+L N + G+ D +++ +R+ G K + +W + +
Sbjct: 381 LEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVK 440
Query: 654 FGTGDVSHPRKKEICSALQGFMEEMRT 680
F + HPR +E LQ + E+++
Sbjct: 441 FYSSGEKHPRTEE----LQRILRELKS 463
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 147/297 (49%), Gaps = 10/297 (3%)
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
+V + N++L+ Y + G M VF+ MP ++V SW +I+G QNG +SE + F+RM
Sbjct: 120 DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMV 179
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGV-ECDVLLSNTLLKMYADCG 353
EG SV P+ ++ VL C +G+ G+ +H Y G + DV + N L+ MY CG
Sbjct: 180 DEG-SVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCG 238
Query: 354 ASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSIL 413
A A VF+ + + ++SW +MI G G E LF +M + G+ P V+ +L
Sbjct: 239 AIEIAMEVFKGIKRRDLISWNTMINGLAAH-GHGTEALNLFHEMKNSGISPDKVTFVGVL 297
Query: 414 PACGRIASHKHGREIHGYLLRN-GVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK-D 471
AC + + G + + + +I V+D+ ++G + A+ +M K D
Sbjct: 298 CACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKAD 357
Query: 472 TISWSMMIFGCSLHGQ---GKLGVDLFRQLERNSEAP--LDDNIYAAALHACSTARM 523
+ W+ ++ ++ + G++ ++ +LE + A + NIY A AR+
Sbjct: 358 AVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARL 414
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 104/272 (38%), Gaps = 43/272 (15%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
+ FD SPE D + WNT+I ++ + A S F QM V
Sbjct: 79 RRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVM---------------- 122
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
+ ++ YA++ D+ + +FD W L
Sbjct: 123 -----------------------SWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLI 159
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXX-XMMGSLRQGRDVHLIAVKLGL 232
K Y G L F RMV +G+ G+ VH LG
Sbjct: 160 KGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGY 219
Query: 233 EG-EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFR 291
+V N+L+ MY CG++ A VF+ + +D++SW +MI G +G +EA+ LF
Sbjct: 220 NKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFH 279
Query: 292 RMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHG 323
M G+S PD V VL C +G ++ G
Sbjct: 280 EMKNSGIS--PDKVTFVGVLCACKHMGLVEDG 309
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 216 bits (549), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 145/495 (29%), Positives = 236/495 (47%), Gaps = 43/495 (8%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRD---ARLVFEKMPCKDVVSWTS 272
++R+ + +H +K GL + ++ +L C S D A LVF ++ K+ W +
Sbjct: 37 TMRELKQIHASLIKTGLISDTVTASRVLAFC--CASPSDMNYAYLVFTRINHKNPFVWNT 94
Query: 273 MIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVR 332
+IRG ++ A+ +F M SVKP + +V G +G + GR++HG +++
Sbjct: 95 IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIK 154
Query: 333 NGVECDVLLSNTLLKMY-------------------------------ADCGASRDARLV 361
G+E D + NT+L MY A CG A+ +
Sbjct: 155 EGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNL 214
Query: 362 FEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIAS 421
F++MP + VSW SMI G+V+ G F + +FR+M + +KP ++ S+L AC + +
Sbjct: 215 FDEMPQRNGVSWNSMISGFVRNGRFK-DALDMFREMQEKDVKPDGFTMVSLLNACAYLGA 273
Query: 422 HKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFG 481
+ GR IH Y++RN E + V A+IDMY K G I LNVF +K W+ MI G
Sbjct: 274 SEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILG 333
Query: 482 CSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCF-----NHIRG 536
+ +G + +DLF +LER+ P D + L AC+ + F ++
Sbjct: 334 LANNGFEERAMDLFSELERSGLEP-DSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIE 392
Query: 537 PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQ 596
P I H V++L GL +EA I+ +E+ + LL CR G + K+ +
Sbjct: 393 PSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKC 452
Query: 597 LCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGT 656
L +L+P YVLL N +A G + + R ++ER ++ + C+ +VH F +
Sbjct: 453 LKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFIS 512
Query: 657 GDVSHPRKKEICSAL 671
+HP+ EI S L
Sbjct: 513 CGGTHPKSAEIYSLL 527
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 187/444 (42%), Gaps = 41/444 (9%)
Query: 120 KQLHTHAVKLALSSRAHTLI-ALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVL 178
KQ+H +K L S T L AS D+ A +F + W + + +
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSR 101
Query: 179 EGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXM--MGSLRQGRDVHLIAVKLGLEGEV 236
P A+ +F M+ +G R GR +H + +K GLE +
Sbjct: 102 SSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDS 161
Query: 237 FASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWT------------------------- 271
F N++L MYV CG + +A +F M DVV+W
Sbjct: 162 FIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR 221
Query: 272 ------SMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGRE 325
SMI G V+NG +A+++FR M + VKPD + ++L C +G+ + GR
Sbjct: 222 NGVSWNSMISGFVRNGRFKDALDMFREMQEK--DVKPDGFTMVSLLNACAYLGASEQGRW 279
Query: 326 IHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGG 385
IH Y+VRN E + ++ L+ MY CG + VFE P K + W SMI G + G
Sbjct: 280 IHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILG-LANNG 338
Query: 386 FNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLL-RNGVEFDINVS 444
F LF ++ GL+P +VS +L AC E + + +E I
Sbjct: 339 FEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHY 398
Query: 445 NAVIDMYVKSGAIACALNVFGEMN-EKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSE 503
++++ +G + A + M E+DT+ WS ++ C G ++ + L++
Sbjct: 399 TLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLD- 457
Query: 504 APLDDNIYAAALHACSTARMFEEG 527
P + Y +A ++ +FEE
Sbjct: 458 -PDETCGYVLLSNAYASYGLFEEA 480
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/235 (18%), Positives = 86/235 (36%), Gaps = 2/235 (0%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
+FD+ P+ + ++WN++I + N F A+ F +M V A
Sbjct: 212 QNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYL 271
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
G+ +H + V+ + + ALI +Y I +F+ CW +
Sbjct: 272 GASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMI 331
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRD-VHLIAVKLGL 232
G A++LF + G + + + L+ K +
Sbjct: 332 LGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMI 391
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPC-KDVVSWTSMIRGCVQNGELSEA 286
E + ++ + G + +A + + MP +D V W+S++ C + G + A
Sbjct: 392 EPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMA 446
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 215 bits (548), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 167/640 (26%), Positives = 290/640 (45%), Gaps = 26/640 (4%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAAD 115
+F+ + D ++WNT++ N +A++ +M V +
Sbjct: 133 IFENLVDPDVVSWNTILSGFDDNQ---IALNFVVRMKSAGVVFDAFTYSTALSFCVGSEG 189
Query: 116 FSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKL 175
F LG QL + VK L S + I +Y+ A+ +FD+ + W L
Sbjct: 190 FLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSG 249
Query: 176 YVLEG-MPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
EG A+ +F M+ L+ R +H + +K G E
Sbjct: 250 LSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYES 309
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
+ N L+ Y CG + + VF +M ++VVSWT+MI + +A+ +F M
Sbjct: 310 LLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMR 364
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGA 354
+G V P+ V ++ +K G +IHG ++ G + + N+ + +YA A
Sbjct: 365 FDG--VYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEA 422
Query: 355 SRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILP 414
DA+ FE + + ++SW +MI G+ + G F++E ++F +E + P + S+L
Sbjct: 423 LEDAKKAFEDITFREIISWNAMISGFAQNG-FSHEALKMFLSAAAETM-PNEYTFGSVLN 480
Query: 415 ACG--RIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDT 472
A S K G+ H +LL+ G+ VS+A++DMY K G I + VF EM++K+
Sbjct: 481 AIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQ 540
Query: 473 ISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFN 532
W+ +I S HG + ++LF ++ + + AP D + + L AC+ M ++G FN
Sbjct: 541 FVWTSIISAYSSHGDFETVMNLFHKMIKENVAP-DLVTFLSVLTACNRKGMVDKGYEIFN 599
Query: 533 HI-----RGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEY 587
+ P H + V +L R G EA + E +L+ +L CR+HG
Sbjct: 600 MMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNV 659
Query: 588 ALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTW--- 644
+G +V E E++P + +YV + N +A K + D +IR+ +R++ + + +W
Sbjct: 660 KMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDV 719
Query: 645 --TLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEG 682
T + F +GD SHP+ EI ++ EM EG
Sbjct: 720 GDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEG 759
Score = 145 bits (367), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 137/265 (51%), Gaps = 5/265 (1%)
Query: 215 GSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMI 274
G L++G +H + G V SN+++ MY G +A +FE + DVVSW +++
Sbjct: 90 GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTIL 149
Query: 275 RGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNG 334
G N A+ RM G V D ST L C G ++ +V+ G
Sbjct: 150 SGFDDN---QIALNFVVRMKSAG--VVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTG 204
Query: 335 VECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLF 394
+E D+++ N+ + MY+ G+ R AR VF++M K ++SW S++ G ++G F E +F
Sbjct: 205 LESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIF 264
Query: 395 RKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKS 454
R M EG++ VS +S++ C K R+IHG ++ G E + V N ++ Y K
Sbjct: 265 RDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKC 324
Query: 455 GAIACALNVFGEMNEKDTISWSMMI 479
G + +VF +M+E++ +SW+ MI
Sbjct: 325 GVLEAVKSVFHQMSERNVVSWTTMI 349
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 184/445 (41%), Gaps = 14/445 (3%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPL-AISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
+VFD+ D ++WN+L+ F A+ F M+R V
Sbjct: 230 RVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHE 289
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
D L +Q+H +K S L+ Y+ + +++F + + WT +
Sbjct: 290 TDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTM- 348
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
+ A+ +F M +++G +H + +K G
Sbjct: 349 ----ISSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFV 404
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
E NS + +Y ++ DA+ FE + ++++SW +MI G QNG EA+++F
Sbjct: 405 SEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSA 464
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIG--SLKHGREIHGYLVRNGVECDVLLSNTLLKMYAD 351
E + P+ +VL S+K G+ H +L++ G+ ++S+ LL MYA
Sbjct: 465 AAETM---PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAK 521
Query: 352 CGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISS 411
G ++ VF +M K WTS+I Y G F V LF KM E + P V+ S
Sbjct: 522 RGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFET-VMNLFHKMIKENVAPDLVTFLS 580
Query: 412 ILPACGRIASHKHGREIHGYLLR-NGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK 470
+L AC R G EI ++ +E + ++DM ++G + A + E+
Sbjct: 581 VLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGG 640
Query: 471 DTISWSMMIFG-CSLHGQGKLGVDL 494
S + G C LHG K+G +
Sbjct: 641 PGESMLQSMLGSCRLHGNVKMGAKV 665
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 174/637 (27%), Positives = 283/637 (44%), Gaps = 54/637 (8%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQML-RHAVXXXXXXXXXXXXASRL 112
H+VFD+ E + + W T++ + S+ AI + +ML A L
Sbjct: 60 HKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGL 119
Query: 113 AADFSLGKQLHTHAVKLALSSRAHTLIALIHLY--------------------------- 145
D LG ++ K L + +++ +Y
Sbjct: 120 VGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTL 179
Query: 146 ------ASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXX 199
A L D AV TLF + W L +V +G PR ALE RM
Sbjct: 180 ISGYCKAGLMDEAV--TLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVL 236
Query: 200 XXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVF 259
G L G+ +H VK GLE FA ++L+ MY +CGS+ A VF
Sbjct: 237 DGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVF 296
Query: 260 --EKMPCKDVVS-WTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGM 316
EK+ V+ W SM+ G + N E A+ L ++ L D +S L +C
Sbjct: 297 HQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCF--DSYTLSGALKICIN 354
Query: 317 IGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSM 376
+L+ G ++H +V +G E D ++ + L+ ++A+ G +DA +F ++P+K +++++ +
Sbjct: 355 YVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGL 414
Query: 377 IRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNG 436
IRG VK G FN+ F LFR++ GL +S+IL C +AS G++IHG ++ G
Sbjct: 415 IRGCVKSG-FNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKG 473
Query: 437 VEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFR 496
E + + A++DMYVK G I + +F M E+D +SW+ +I G +G+ + + FR
Sbjct: 474 YESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVE---EAFR 530
Query: 497 QLERNSEAPLDDN--IYAAALHACSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLL 549
+ ++ N + L AC + + EE R ++ P + H V LL
Sbjct: 531 YFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLL 590
Query: 550 ARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYV 609
+ GLF EA I + +E + LL C H L + E+L + P + Y
Sbjct: 591 GQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYT 650
Query: 610 LLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTL 646
L N +A G D + K+RE ++ G K + +W +
Sbjct: 651 SLSNAYATLGMWDQLSKVREAAKKLGAK-ESGMSWII 686
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 132/563 (23%), Positives = 234/563 (41%), Gaps = 45/563 (7%)
Query: 116 FSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKL 175
F G+ + H +K +S +I +Y ++ A +FD+ + WT +
Sbjct: 21 FKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSG 80
Query: 176 YVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXX-XMMGSLRQGRDVHLIAVKLGLEG 234
Y +G P A+EL+ RM+ ++G ++ G V+ K L G
Sbjct: 81 YTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRG 140
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
+V NS++ MYV G + +A F+++ SW ++I G + G + EA+ LF RM
Sbjct: 141 DVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMP 200
Query: 295 ----------LEGLSVKPD--------------LVMVSTVLP----VCGMIGSLKHGREI 326
+ G K LV+ LP C G L G+++
Sbjct: 201 QPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQL 260
Query: 327 HGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQ---MPSKTVVSWTSMIRGYVKK 383
H +V++G+E + L+ MY++CG+ A VF Q + +V W SM+ G++
Sbjct: 261 HCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLIN 320
Query: 384 GGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINV 443
N L ++ L + ++S L C + + G ++H ++ +G E D V
Sbjct: 321 EE-NEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIV 379
Query: 444 SNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSE 503
+ ++D++ G I A +F + KD I++S +I GC G L LFR+L +
Sbjct: 380 GSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLG- 438
Query: 504 APLDDNIYAAALHACSTARMFEEGR----VCFNHIRGPMIAHCAQKVSLLARCGLFDEAM 559
D I + L CS+ G+ +C V + +CG D +
Sbjct: 439 LDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGV 498
Query: 560 VF---IREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHA 616
V + E+ + ++ + R+ + ++I +EP N ++ LL+
Sbjct: 499 VLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMIN--IGIEP-NKVTFLGLLSACR 555
Query: 617 GKGKLDMVDKIRETIR-ERGLKP 638
G L+ ET++ E GL+P
Sbjct: 556 HSGLLEEARSTLETMKSEYGLEP 578
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 164/339 (48%), Gaps = 42/339 (12%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIR 275
+ ++G + +K G+ VF +N+++ MYVD + DA VF++M +++V+WT+M+
Sbjct: 20 AFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVS 79
Query: 276 GCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGV 335
G +G+ ++A+EL+RRM L+ + M S VL CG++G ++ G ++ + + +
Sbjct: 80 GYTSDGKPNKAIELYRRM-LDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENL 138
Query: 336 ECDVLLSNTLLKMYA-------------------------------DCGASRDARLVFEQ 364
DV+L N+++ MY G +A +F +
Sbjct: 139 RGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHR 198
Query: 365 MPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKH 424
MP VVSW +I G+V KG + +M EGL ++ L AC
Sbjct: 199 MPQPNVVSWNCLISGFVDKG--SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTM 256
Query: 425 GREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTIS-----WSMMI 479
G+++H ++++G+E +A+IDMY G++ A +VF + EK ++ W+ M+
Sbjct: 257 GKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQ--EKLAVNSSVAVWNSML 314
Query: 480 FGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHAC 518
G ++ + + + L Q+ + S+ D + AL C
Sbjct: 315 SGFLINEENEAALWLLLQIYQ-SDLCFDSYTLSGALKIC 352
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 107/199 (53%), Gaps = 2/199 (1%)
Query: 303 DLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVF 362
DL +++ L CG + + K G I ++++ G+ +V ++N ++ MY D DA VF
Sbjct: 4 DLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVF 63
Query: 363 EQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKM-NSEGLKPTAVSISSILPACGRIAS 421
++M + +V+WT+M+ GY G N+ L+R+M +SE S++L ACG +
Sbjct: 64 DEMSERNIVTWTTMVSGYTSDGK-PNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGD 122
Query: 422 HKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFG 481
+ G ++ + + + D+ + N+V+DMYVK+G + A + F E+ + SW+ +I G
Sbjct: 123 IQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISG 182
Query: 482 CSLHGQGKLGVDLFRQLER 500
G V LF ++ +
Sbjct: 183 YCKAGLMDEAVTLFHRMPQ 201
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 72/126 (57%)
Query: 409 ISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMN 468
I++ L CG++ + K G I ++++ G+ ++ ++N VI MYV ++ A VF EM+
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMS 67
Query: 469 EKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGR 528
E++ ++W+ M+ G + G+ ++L+R++ + E ++ +Y+A L AC + G
Sbjct: 68 ERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGI 127
Query: 529 VCFNHI 534
+ + I
Sbjct: 128 LVYERI 133
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 142/476 (29%), Positives = 225/476 (47%), Gaps = 42/476 (8%)
Query: 238 ASNSLLKMYVDCGSMRD---ARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
+S + KM C + D A +F ++ +V + S+IR N + + +++++
Sbjct: 41 SSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLL 100
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNG-------------------- 334
+ + PD + C +GS G+++HG+L + G
Sbjct: 101 RKSFEL-PDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDD 159
Query: 335 -----------VECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKK 383
E DV+ N+LL YA G + A+ +F M KT+VSWT+MI GY
Sbjct: 160 LVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGI 219
Query: 384 GGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINV 443
G + E FR+M G++P +S+ S+LP+C ++ S + G+ IH Y R G V
Sbjct: 220 GCYV-EAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGV 278
Query: 444 SNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSE 503
NA+I+MY K G I+ A+ +FG+M KD ISWS MI G + HG ++ F +++R
Sbjct: 279 CNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKV 338
Query: 504 APLDDNIYAAALHACSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEA 558
P + + L ACS M++EG F+ +R P I H + +LAR G + A
Sbjct: 339 KP-NGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERA 397
Query: 559 MVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGK 618
+ + ++ ++ LL CR G + ++ L ELEP + NYVLL N +A
Sbjct: 398 VEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADL 457
Query: 619 GKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGF 674
GK + V ++R+ IR +K + V F +GD S P EI LQ F
Sbjct: 458 GKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQLF 513
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 130/257 (50%), Gaps = 5/257 (1%)
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
E +V + NSLL Y G M+ A+ +F M K +VSWT+MI G G EAM+ FR
Sbjct: 172 ERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFRE 231
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADC 352
M L G ++PD + + +VLP C +GSL+ G+ IH Y R G + N L++MY+ C
Sbjct: 232 MQLAG--IEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKC 289
Query: 353 GASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSI 412
G A +F QM K V+SW++MI GY G + + F +M +KP ++ +
Sbjct: 290 GVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAI-ETFNEMQRAKVKPNGITFLGL 348
Query: 413 LPACGRIASHKHGREIHGYLLRN-GVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK- 470
L AC + + G + ++ +E I +ID+ ++G + A+ + M K
Sbjct: 349 LSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKP 408
Query: 471 DTISWSMMIFGCSLHGQ 487
D+ W ++ C G
Sbjct: 409 DSKIWGSLLSSCRTPGN 425
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 133/347 (38%), Gaps = 35/347 (10%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA- 113
++F++ + +N++I + N+ + I + Q+LR + S +
Sbjct: 63 RLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASL 122
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
LGKQ+H H K T ALI +Y DD+ A +FD+ W L
Sbjct: 123 GSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLL 182
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXX---------------------------- 205
Y G + A LFH M+
Sbjct: 183 SGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEI 242
Query: 206 ---XXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKM 262
+GSL G+ +HL A + G + N+L++MY CG + A +F +M
Sbjct: 243 SLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQM 302
Query: 263 PCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKH 322
KDV+SW++MI G +G A+E F M + VKP+ + +L C +G +
Sbjct: 303 EGKDVISWSTMISGYAYHGNAHGAIETFNEM--QRAKVKPNGITFLGLLSACSHVGMWQE 360
Query: 323 GREIHGYLVRN-GVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK 368
G + ++ +E + L+ + A G A + + MP K
Sbjct: 361 GLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMK 407
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 93/189 (49%), Gaps = 8/189 (4%)
Query: 311 LPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRD---ARLVFEQMPS 367
+P + S ++I+ ++ +G+ + + KM C D A +F Q+ +
Sbjct: 14 IPFLQRVKSRNEWKKINASIIIHGLSQSSFM---VTKMVDFCDKIEDMDYATRLFNQVSN 70
Query: 368 KTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLK-PTAVSISSILPACGRIASHKHGR 426
V + S+IR Y + +V R+++++ + + P + + +C + S G+
Sbjct: 71 PNVFLYNSIIRAYTHNSLYC-DVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGK 129
Query: 427 EIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHG 486
++HG+L + G F + NA+IDMY+K + A VF EM E+D ISW+ ++ G + G
Sbjct: 130 QVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLG 189
Query: 487 QGKLGVDLF 495
Q K LF
Sbjct: 190 QMKKAKGLF 198
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 210 bits (535), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 149/578 (25%), Positives = 253/578 (43%), Gaps = 38/578 (6%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
++F++ PE D +WN +I N F +M R V + L
Sbjct: 117 ELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLIL 176
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
D L +QLH VK S +++ +Y ++ A+ +FD+ W + +
Sbjct: 177 DLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVR 236
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
Y+ G A+ +F +M+ +L G+ +H IAVKL +
Sbjct: 237 RYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVA 296
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM- 293
+ S S+ MYV C + AR VF++ KD+ SWTS + G +G EA ELF M
Sbjct: 297 DTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMP 356
Query: 294 ----------------------NLEGLSV------KPDLVMVSTVLPVCGMIGSLKHGRE 325
L+ L++ D V + +L VC I ++ G++
Sbjct: 357 ERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQ 416
Query: 326 IHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPS-KTVVSWTSMIRGYVKKG 384
HG++ R+G + +V+++N LL MY CG + A + F QM + VSW +++ G V +
Sbjct: 417 AHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTG-VARV 475
Query: 385 GFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVS 444
G + + F M E KP+ +++++L C I + G+ IHG+L+R+G + D+ +
Sbjct: 476 GRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIR 534
Query: 445 NAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEA 504
A++DMY K A+ VF E +D I W+ +I GC +G+ K +LF LE
Sbjct: 535 GAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVK 594
Query: 505 PLDDNIYAAALHACSTARMFEEGRVCFNHIR-----GPMIAHCAQKVSLLARCGLFDEAM 559
P D + L AC E G F+ + P + H + L + G +
Sbjct: 595 P-DHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLE 653
Query: 560 VFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQL 597
F+ + ++L ++ + C+ + LG ++L
Sbjct: 654 EFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRL 691
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 152/284 (53%), Gaps = 4/284 (1%)
Query: 219 QGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCV 278
Q R V V +F N ++ Y CG + DAR +FE+MP +D SW ++I C
Sbjct: 79 QARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACA 138
Query: 279 QNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECD 338
QNG E +FRRMN +G V+ + VL CG+I L+ R++H +V+ G +
Sbjct: 139 QNGVSDEVFRMFRRMNRDG--VRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGN 196
Query: 339 VLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMN 398
V L +++ +Y C DAR VF+++ + + VSW ++R Y++ G FN+E +F KM
Sbjct: 197 VDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMG-FNDEAVVMFFKML 255
Query: 399 SEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIA 458
++P ++SS++ AC R + + G+ IH ++ V D VS +V DMYVK +
Sbjct: 256 ELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLE 315
Query: 459 CALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQL-ERN 501
A VF + KD SW+ + G ++ G + +LF + ERN
Sbjct: 316 SARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERN 359
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 129/526 (24%), Positives = 220/526 (41%), Gaps = 59/526 (11%)
Query: 119 GKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVL 178
+++ +H V + L I Y + A+ LF++ W +
Sbjct: 80 ARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQ 139
Query: 179 EGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFA 238
G+ +F RM ++ LR R +H VK G G V
Sbjct: 140 NGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDL 199
Query: 239 SNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGL 298
S++ +Y C M DAR VF+++ VSW ++R ++ G EA+ +F +M LE L
Sbjct: 200 ETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKM-LE-L 257
Query: 299 SVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADC------ 352
+V+P VS+V+ C +L+ G+ IH V+ V D ++S ++ MY C
Sbjct: 258 NVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESA 317
Query: 353 -------------------------GASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFN 387
G +R+AR +F+ MP + +VSW +M+ GYV +
Sbjct: 318 RRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEW- 376
Query: 388 NEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAV 447
+E M E V++ IL C I+ + G++ HG++ R+G + ++ V+NA+
Sbjct: 377 DEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANAL 436
Query: 448 IDMYVKSGAIACALNVFGEMNE-KDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPL 506
+DMY K G + A F +M+E +D +SW+ ++ G + G+ + + F ++ EA
Sbjct: 437 LDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQ--VEAKP 494
Query: 507 DDNIYAAALHACSTARMFEEGRVCFNH-----------IRGPMIAHCAQKVSLLARCGLF 555
A L C+ G+ IRG M V + ++C F
Sbjct: 495 SKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAM-------VDMYSKCRCF 547
Query: 556 DEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELE 601
D A+ +E + ++ GC +G K+V E LE
Sbjct: 548 DYAIEVFKEAATRDLI-LWNSIIRGCCRNGR---SKEVFELFMLLE 589
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 113/216 (52%), Gaps = 2/216 (0%)
Query: 314 CGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSW 373
C + R++ +LV + L N ++ Y CG DAR +FE+MP + SW
Sbjct: 71 CSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSW 130
Query: 374 TSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLL 433
++I + G ++EVFR+FR+MN +G++ T S + +L +CG I + R++H ++
Sbjct: 131 NAVITA-CAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVV 189
Query: 434 RNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVD 493
+ G ++++ +++D+Y K ++ A VF E+ +SW++++ G V
Sbjct: 190 KYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVV 249
Query: 494 LFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRV 529
+F ++ + PL+ + + L ACS + E G+V
Sbjct: 250 MFFKMLELNVRPLNHTVSSVML-ACSRSLALEVGKV 284
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 210 bits (535), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 153/575 (26%), Positives = 274/575 (47%), Gaps = 22/575 (3%)
Query: 119 GKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVL 178
G+++H + ++ + +++ +YA D ++ A+ LFD+ + W+ + + YV
Sbjct: 144 GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQ 202
Query: 179 EGMPRSALELFHRMV-XXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE-GEV 236
P L+LF MV +M + GR VH +++ G + +V
Sbjct: 203 SKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADV 262
Query: 237 FASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLE 296
F NSL+ MY + A VF++ C+++VSW S++ G V N EA+E+F M E
Sbjct: 263 FVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQE 322
Query: 297 GLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASR 356
+ V D V V ++L VC + IHG ++R G E + + ++L+ Y C
Sbjct: 323 AVEV--DEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVD 380
Query: 357 DARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPAC 416
DA V + M K VVS ++MI G + G ++E +F M P A+++ S+L AC
Sbjct: 381 DAGTVLDSMTYKDVVSCSTMISG-LAHAGRSDEAISIFCHMRD---TPNAITVISLLNAC 436
Query: 417 GRIASHKHGREIHGYLLRNGVEF-DINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISW 475
A + + HG +R + DI+V +++D Y K GAI A F ++ EK+ ISW
Sbjct: 437 SVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISW 496
Query: 476 SMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHI- 534
+++I +++G + LF ++++ P + Y AAL AC+ + ++G + F +
Sbjct: 497 TVIISAYAINGLPDKALALFDEMKQKGYTP-NAVTYLAALSACNHGGLVKKGLMIFKSMV 555
Query: 535 ---RGPMIAHCAQKVSLLARCGLFDEAMVFIRE--QKIEQHPEVLRKLLEGCRIH-GEYA 588
P + H + V +L+R G D A+ I+ + ++ +L GCR +
Sbjct: 556 EEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLI 615
Query: 589 LGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYR 648
+ +V+ ++ ELEPL + Y+L + A + + V +R ++ER K + +++ R
Sbjct: 616 ITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKER--KVRVVAGYSMVR 673
Query: 649 EK--VHVFGTGDVSHPRKKEICSALQGFMEEMRTE 681
E F GD E+ +Q M+ +
Sbjct: 674 EGNLAKRFLAGDKLSQSDSELNDVVQSLHRCMKLD 708
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 187/435 (42%), Gaps = 12/435 (2%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHA-VXXXXXXXXXXXXASRL 112
++FD+ E D ++W+ +I +++ + + + F +M+ A A +
Sbjct: 179 RKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTV 238
Query: 113 AADFSLGKQLHTHAVKLALS-SRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTF 171
D +G+ +H +++ + +LI +Y+ D+ A +FD+T W
Sbjct: 239 MEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNS 298
Query: 172 LAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLG 231
+ +V ALE+FH MV + +H + ++ G
Sbjct: 299 ILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRG 358
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFR 291
E A +SL+ Y C + DA V + M KDVVS ++MI G G EA+ +F
Sbjct: 359 YESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFC 418
Query: 292 RMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVEC-DVLLSNTLLKMYA 350
M P+ + V ++L C + L+ + HG +R + D+ + +++ YA
Sbjct: 419 HMR-----DTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYA 473
Query: 351 DCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSIS 410
CGA AR F+Q+ K ++SWT +I Y G ++ LF +M +G P AV+
Sbjct: 474 KCGAIEMARRTFDQITEKNIISWTVIISAYAIN-GLPDKALALFDEMKQKGYTPNAVTYL 532
Query: 411 SILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK 470
+ L AC K G I ++ + + + ++DM ++G I A+ + + E
Sbjct: 533 AALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPED 592
Query: 471 ---DTISWSMMIFGC 482
+W ++ GC
Sbjct: 593 VKAGASAWGAILSGC 607
Score = 126 bits (317), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 111/492 (22%), Positives = 216/492 (43%), Gaps = 68/492 (13%)
Query: 236 VFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNL 295
+F NS+ Y+ CG + F+ M +D VSW ++ G + G E + F ++ +
Sbjct: 61 LFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV 120
Query: 296 EGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGAS 355
G +P+ + V+ C + G +IHGY++R+G + N++L MYAD S
Sbjct: 121 WGF--EPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYAD-SDS 175
Query: 356 RDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEV--FRLFRKMNSEG-LKPTAVSISSI 412
AR +F++M + V+SW+ +IR YV+ V +LF++M E +P V+++S+
Sbjct: 176 LSARKLFDEMSERDVISWSVVIRSYVQS---KEPVVGLKLFKEMVHEAKTEPDCVTVTSV 232
Query: 413 LPACGRIASHKHGREIHGYLLRNGVEF-DINVSNAVIDMYVKSGAIACALNVFGEMNEKD 471
L AC + GR +HG+ +R G + D+ V N++IDMY K + A VF E ++
Sbjct: 233 LKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRN 292
Query: 472 TISWSMMIFGCSLHGQGKLGVDLFRQLERNS------------------EAPL------- 506
+SW+ ++ G + + +++F + + + E PL
Sbjct: 293 IVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHG 352
Query: 507 ---------DDNIYAAALHACSTARMFEEGRVCFNHIRGPMIAHCAQKVSLLARCGLFDE 557
++ ++ + A ++ + ++ + + + C+ +S LA G DE
Sbjct: 353 VIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDE 412
Query: 558 AMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQ----VIEQLCELEPLNAENYVLLLN 613
A+ + + + LL C + + K I + + ++ + ++
Sbjct: 413 AISIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSI--VD 470
Query: 614 WHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQG 673
+A G ++M + + I E+ + +WT+ + G D AL
Sbjct: 471 AYAKCGAIEMARRTFDQITEKNI-----ISWTVIISAYAINGLPD----------KALAL 515
Query: 674 FMEEMRTEGVEP 685
F +EM+ +G P
Sbjct: 516 F-DEMKQKGYTP 526
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 144/471 (30%), Positives = 230/471 (48%), Gaps = 32/471 (6%)
Query: 214 MGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSM 273
+G ++ G +H K GL ++F N L+ +Y+ CG + +R +F++MP +D VS+ SM
Sbjct: 134 LGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSM 193
Query: 274 IRGCVQNGELSEAMELFRRMNLE------------GLSVKPDLVMVSTVL----PVCGMI 317
I G V+ G + A ELF M +E G + D V +++ L P +I
Sbjct: 194 IDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLI 253
Query: 318 -------GSLKHGR-EIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKT 369
G +KHGR E L DV+ T++ YA G A+ +F+QMP +
Sbjct: 254 SWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRD 313
Query: 370 VVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEG-LKPTAVSISSILPACGRIASHKHGREI 428
VV++ SM+ GYV+ ++ E +F M E L P ++ +LPA ++ ++
Sbjct: 314 VVAYNSMMAGYVQNK-YHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDM 372
Query: 429 HGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQG 488
H Y++ + A+IDMY K G+I A+ VF + K W+ MI G ++HG G
Sbjct: 373 HLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLG 432
Query: 489 KLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR-----GPMIAHCA 543
+ D+ Q+ER S P DD + L+ACS + + +EG +CF +R P + H
Sbjct: 433 ESAFDMLLQIERLSLKP-DDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYG 491
Query: 544 QKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPL 603
V +L+R G + A I E +E + + R L C H E+ G+ V + L
Sbjct: 492 CMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGY 551
Query: 604 NAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVF 654
N +YVLL N +A G V ++R ++ER ++ C+W +VH F
Sbjct: 552 NPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 602
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/464 (25%), Positives = 184/464 (39%), Gaps = 46/464 (9%)
Query: 64 DTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAADFSLGKQLH 123
D WN +I +H A+ ML + V A G Q+H
Sbjct: 85 DPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIH 144
Query: 124 THAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPR 183
K L S LI LY + +++ +FD+ S + + YV G+
Sbjct: 145 GFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIV 204
Query: 184 SALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL---EGEVFASN 240
SA ELF M M+ Q D IA KL E ++ + N
Sbjct: 205 SARELFDLM--------PMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWN 256
Query: 241 SLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIR------------------------- 275
S++ YV G + DA+ +F+ MP +DVV+W +MI
Sbjct: 257 SMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVA 316
Query: 276 ------GCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGY 329
G VQN EA+E+F M E + PD + VLP +G L ++H Y
Sbjct: 317 YNSMMAGYVQNKYHMEALEIFSDMEKES-HLLPDDTTLVIVLPAIAQLGRLSKAIDMHLY 375
Query: 330 LVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNE 389
+V L L+ MY+ CG+ + A LVFE + +K++ W +MI G + G
Sbjct: 376 IVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGG-LAIHGLGES 434
Query: 390 VFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLR-NGVEFDINVSNAVI 448
F + ++ LKP ++ +L AC K G + R + +E + ++
Sbjct: 435 AFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMV 494
Query: 449 DMYVKSGAIACALNVFGEMN-EKDTISWSMMIFGCSLHGQGKLG 491
D+ +SG+I A N+ EM E + + W + CS H + + G
Sbjct: 495 DILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETG 538
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 141/300 (47%), Gaps = 22/300 (7%)
Query: 213 MMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRD------ARLVFEKM---- 262
++GS + DV+ I +L G + SN ++ + S R AR VF +
Sbjct: 18 VLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCS 77
Query: 263 ----PCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIG 318
+D W ++I+ + +A+ L M G+SV D +S VL C +G
Sbjct: 78 FSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSV--DKFSLSLVLKACSRLG 135
Query: 319 SLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIR 378
+K G +IHG+L + G+ D+ L N L+ +Y CG +R +F++MP + VS+ SMI
Sbjct: 136 FVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMID 195
Query: 379 GYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVE 438
GYV K G LF M E +S +S++ + + G +I L + E
Sbjct: 196 GYV-KCGLIVSARELFDLMPME--MKNLISWNSMISGYAQTSD---GVDIASKLFADMPE 249
Query: 439 FDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQL 498
D+ N++ID YVK G I A +F M +D ++W+ MI G + G LF Q+
Sbjct: 250 KDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQM 309
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/498 (28%), Positives = 236/498 (47%), Gaps = 45/498 (9%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIR 275
+L+ + H + GL + ++ + G +R A VF PC + +MIR
Sbjct: 27 NLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIR 86
Query: 276 GCV---QNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVR 332
+ S A+ ++R+ L L KPD VL + + + GR+IHG +V
Sbjct: 87 ALSLLDEPNAHSIAITVYRK--LWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVV 144
Query: 333 NGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTV---------------------- 370
G + V + L++MY CG DAR +F++M K V
Sbjct: 145 FGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSL 204
Query: 371 -----------VSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRI 419
VSWT +I GY K G +E +F++M E ++P V++ ++L AC +
Sbjct: 205 LEMMPCWVRNEVSWTCVISGYAKSGR-ASEAIEVFQRMLMENVEPDEVTLLAVLSACADL 263
Query: 420 ASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMI 479
S + G I Y+ G+ ++++NAVIDMY KSG I AL+VF +NE++ ++W+ +I
Sbjct: 264 GSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTII 323
Query: 480 FGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG--- 536
G + HG G + +F ++ + P +D + A L ACS + G+ FN +R
Sbjct: 324 AGLATHGHGAEALAMFNRMVKAGVRP-NDVTFIAILSACSHVGWVDLGKRLFNSMRSKYG 382
Query: 537 --PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVI 594
P I H + LL R G EA I+ + + + LL +H + LG++ +
Sbjct: 383 IHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERAL 442
Query: 595 EQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVF 654
+L +LEP N+ NY+LL N ++ G+ D +R ++ G+K + +V+ F
Sbjct: 443 SELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKF 502
Query: 655 GTGDVSHPRKKEICSALQ 672
+GD++HP+ + I LQ
Sbjct: 503 ISGDLTHPQVERIHEILQ 520
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 179/393 (45%), Gaps = 40/393 (10%)
Query: 220 GRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDV------------ 267
GR +H V G + V L++MY CG + DAR +F++M KDV
Sbjct: 135 GRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGK 194
Query: 268 ---------------------VSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVM 306
VSWT +I G ++G SEA+E+F+RM +E +V+PD V
Sbjct: 195 VGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLME--NVEPDEVT 252
Query: 307 VSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMP 366
+ VL C +GSL+ G I Y+ G+ V L+N ++ MYA G A VFE +
Sbjct: 253 LLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVN 312
Query: 367 SKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGR 426
+ VV+WT++I G G E +F +M G++P V+ +IL AC + G+
Sbjct: 313 ERNVVTWTTIIAGLATH-GHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGK 371
Query: 427 EIHGYLL-RNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTIS-WSMMIFGCSL 484
+ + + G+ +I +ID+ ++G + A V M K + W ++ ++
Sbjct: 372 RLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNV 431
Query: 485 HGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRGPMIAHCAQ 544
H +LG +L + P + Y + S ++E R+ N ++G + A
Sbjct: 432 HHDLELGERALSELIK--LEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAG 489
Query: 545 KVSLLARCGLFDEAMVFIREQKIEQHPEVLRKL 577
+ S+ ++ + ++E+ E+L+++
Sbjct: 490 ESSIEVENRVYKFISGDLTHPQVERIHEILQEM 522
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 144/363 (39%), Gaps = 42/363 (11%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLS----NNHFPLAISTFTQMLRHAVXXXXXXXXXXXXA 109
+ VF P +T NT+I LS N +AI+ + ++
Sbjct: 67 YSVFTHQPCPNTYLHNTMIRA-LSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKI 125
Query: 110 SRLAADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCW 169
+ +D G+Q+H V S H + LI +Y S + A+ +FD+ + W
Sbjct: 126 AVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVW 185
Query: 170 TFLAKLY-----------VLEGMP----------------------RSALELFHRMVXXX 196
L Y +LE MP A+E+F RM+
Sbjct: 186 NALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMEN 245
Query: 197 XXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDAR 256
+GSL G + G+ V +N+++ MY G++ A
Sbjct: 246 VEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKAL 305
Query: 257 LVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGM 316
VFE + ++VV+WT++I G +G +EA+ +F RM G V+P+ V +L C
Sbjct: 306 DVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAG--VRPNDVTFIAILSACSH 363
Query: 317 IGSLKHGREIHGYL-VRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVS-WT 374
+G + G+ + + + G+ ++ ++ + G R+A V + MP K + W
Sbjct: 364 VGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWG 423
Query: 375 SMI 377
S++
Sbjct: 424 SLL 426
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 147/367 (40%), Gaps = 57/367 (15%)
Query: 289 LFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKM 348
+ +R+N LS+ L T L + G +LK ++ H Y++ G+ D L ++
Sbjct: 1 MIQRIN--ALSLSSGLNWFVTSLKIHG--NNLKTLKQSHCYMIITGLNRDNLNVAKFIEA 56
Query: 349 YADCGASRDARLVFEQMPSKTVVSWTSMIRGY--VKKGGFNNEVFRLFRKMNSEGLKPTA 406
++ G R A VF P +MIR + + ++ ++RK+ + KP
Sbjct: 57 CSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDT 116
Query: 407 VSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGE 466
+ +L R++ GR+IHG ++ G + ++V +I MY G + A +F E
Sbjct: 117 FTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDE 176
Query: 467 MNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEE 526
M KD W+ + L G GK+G +D+ AR E
Sbjct: 177 MLVKDVNVWNAL-----LAGYGKVG-------------EMDE------------ARSLLE 206
Query: 527 GRVCFNHIRGPMIAHCAQKVSLLARCGLFDEAM-VFIR--EQKIEQHPEVLRKLLEGCRI 583
C+ +R + C +S A+ G EA+ VF R + +E L +L C
Sbjct: 207 MMPCW--VRNEVSWTCV--ISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACAD 262
Query: 584 HGEYALGKQVIEQLCELEPLNAENYVLLLN-----WHAGKGKLDMVDKIRETIRERGLKP 638
G LG E++C N + LN +A G + + E + ER +
Sbjct: 263 LGSLELG----ERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNV-- 316
Query: 639 KKACTWT 645
TWT
Sbjct: 317 ---VTWT 320
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 206 bits (524), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 171/632 (27%), Positives = 276/632 (43%), Gaps = 112/632 (17%)
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
D + G+Q+H +K L S + +++++YA +A A+++F A S + +
Sbjct: 56 DVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVD 115
Query: 175 LYV-----------LEGMPR--------------------SALELFHRMVXXXXXXXXXX 203
YV + MP A+ELF M
Sbjct: 116 GYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVT 175
Query: 204 XXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMP 263
+G + R + +A+KL LEG VF S +LL MY C ++DAR +F++MP
Sbjct: 176 LATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMP 235
Query: 264 -------------------------------CKDVVSWTSMIRGCVQNGELSEAMELFRR 292
KD+VSW +MI GC++ +L EA+ +
Sbjct: 236 ERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTE 295
Query: 293 MNLEGLSVKPDLVMVSTVLPVCG-MIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYA- 350
M G+ KP VM+ +L +GS K G ++HG +V+ G +C L T++ YA
Sbjct: 296 MLRCGM--KPSEVMMVDLLSASARSVGSSK-GLQLHGTIVKRGFDCYDFLQATIIHFYAV 352
Query: 351 ----------------DCGASRD--------------ARLVFEQMPSKTVVSWTSMIRGY 380
D ASR+ AR VF+Q K + SW +MI GY
Sbjct: 353 SNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGY 412
Query: 381 VKKGGFNNEVFRLFRKM-NSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEF 439
+ LFR+M +S +KP A+++ S+ A + S + G+ H YL + +
Sbjct: 413 AQSLS-PQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPP 471
Query: 440 DINVSNAVIDMYVKSGAIACALNVFGEMN--EKDTIS-WSMMIFGCSLHGQGKLGVDLFR 496
+ N++ A+IDMY K G+I ALN+F + TIS W+ +I G + HG KL +DL+
Sbjct: 472 NDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYS 531
Query: 497 QLERNSEAPLDDN--IYAAALHACSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLL 549
L+ P+ N + L AC A + E G+ F ++ P I H V LL
Sbjct: 532 DLQ---SLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLL 588
Query: 550 ARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYV 609
+ G +EA I++ ++ + LL R HG + + +L ++P + V
Sbjct: 589 GKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKV 648
Query: 610 LLLNWHAGKGKLDMVDKIRETIRERGLKPKKA 641
+L N +A G+ + V +RE +R R ++ +A
Sbjct: 649 MLSNVYADAGRWEDVALVREEMRTRDVEWSRA 680
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 136/353 (38%), Gaps = 38/353 (10%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
++FD+ E D ++W T+I L N A+ +T+MLR + AS +
Sbjct: 260 ELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSV 319
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAV--------------------- 153
S G QLH VK +IH YA +DI +
Sbjct: 320 GSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIA 379
Query: 154 ----------AQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXX-XXX 202
A+ +FD+T W + Y P+ AL LF M+
Sbjct: 380 GFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAI 439
Query: 203 XXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVF--- 259
+GSL +G+ H + + +++ MY CGS+ A +F
Sbjct: 440 TMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQT 499
Query: 260 EKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGS 319
+ + + W ++I G +G A++L+ +L+ L +KP+ + VL C G
Sbjct: 500 KNISSSTISPWNAIICGSATHGHAKLALDLYS--DLQSLPIKPNSITFVGVLSACCHAGL 557
Query: 320 LKHGREIHGYLVRN-GVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVV 371
++ G+ + + G+E D+ ++ + G +A+ + ++MP K V
Sbjct: 558 VELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADV 610
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 206 bits (524), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 159/565 (28%), Positives = 261/565 (46%), Gaps = 52/565 (9%)
Query: 151 IAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXX 210
IA A+ LFD WT + Y+ G R A ELF R+
Sbjct: 62 IAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV--------DSRKNVVTWT 113
Query: 211 XXMMGSLRQGR-DVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVS 269
+ G LR + + + + E V + N+++ Y G + A +F++MP +++VS
Sbjct: 114 AMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVS 173
Query: 270 WTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGRE---- 325
W SM++ VQ G + EAM LF RM + D+V + ++ G + R
Sbjct: 174 WNSMVKALVQRGRIDEAMNLFERM------PRRDVVSWTAMVDGLAKNGKVDEARRLFDC 227
Query: 326 ------------IHGYLVRNGV-ECDVLLS----------NTLLKMYADCGASRDARLVF 362
I GY N + E D L NT++ + A +F
Sbjct: 228 MPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLF 287
Query: 363 EQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEG-LKPTAVSISSILPACGRIAS 421
++MP K V+SWT+MI GYV+ N E +F KM +G +KP + SIL AC +A
Sbjct: 288 DRMPEKNVISWTTMITGYVENKE-NEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAG 346
Query: 422 HKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVF--GEMNEKDTISWSMMI 479
G++IH + ++ + + V++A+++MY KSG + A +F G + ++D ISW+ MI
Sbjct: 347 LVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMI 406
Query: 480 FGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNH-IRGPM 538
+ HG GK ++++ Q+ ++ P Y L ACS A + E+G F +R
Sbjct: 407 AVYAHHGHGKEAIEMYNQMRKHGFKP-SAVTYLNLLFACSHAGLVEKGMEFFKDLVRDES 465
Query: 539 IA----HCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVI 594
+ H V L R G + FI +L C +H E ++ K+V+
Sbjct: 466 LPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVV 525
Query: 595 EQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVF 654
+++ E +A YVL+ N +A GK + ++R ++E+GLK + C+W ++ H+F
Sbjct: 526 KKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLF 585
Query: 655 GTGDVSHPRKKEICSALQGFMEEMR 679
GD SHP+ + + S L +MR
Sbjct: 586 VVGDKSHPQFEALDSILSDLRNKMR 610
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 138/308 (44%), Gaps = 45/308 (14%)
Query: 250 GSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVST 309
G + +AR +F+ +P +DVV+WT +I G ++ G++ EA ELF R++
Sbjct: 60 GKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSR-----------KN 108
Query: 310 VLPVCGMIGSLKHGRE--IHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPS 367
V+ M+ ++ I L + E +V+ NT++ YA G A +F++MP
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPE 168
Query: 368 KTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGRE 427
+ +VSW SM++ V++G +E LF +M + VS ++++ + R
Sbjct: 169 RNIVSWNSMVKALVQRGRI-DEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDEARR 223
Query: 428 ----------------IHGYLLRNGV-----------EFDINVSNAVIDMYVKSGAIACA 460
I GY N + E D N +I ++++ + A
Sbjct: 224 LFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKA 283
Query: 461 LNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACST 520
+F M EK+ ISW+ MI G + + + +++F ++ R+ + Y + L ACS
Sbjct: 284 CGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSD 343
Query: 521 ARMFEEGR 528
EG+
Sbjct: 344 LAGLVEGQ 351
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRH-AVXXXXXXXXXXXXASRLAA 114
+FD+ PE + ++W T+I ++ N A++ F++MLR +V A A
Sbjct: 286 LFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLA 345
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSD--CWTFL 172
G+Q+H K AL+++Y+ ++ A+ +FD D W +
Sbjct: 346 GLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSM 405
Query: 173 AKLYVLEGMPRSALELFHRM 192
+Y G + A+E++++M
Sbjct: 406 IAVYAHHGHGKEAIEMYNQM 425
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 206 bits (524), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 156/593 (26%), Positives = 256/593 (43%), Gaps = 36/593 (6%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAAD 115
VF++ D ++ N +++ +N F A QM +V + + D
Sbjct: 348 VFEELVCRDVISSNAILNGFAANGMFEEAFGILNQM--QSVDKIQPDIATVVSITSICGD 405
Query: 116 FSL---GKQLHTHAVKLALSSRAHTLI-ALIHLYASLDDIAVAQTLFDKTAPFGSDCWTF 171
S G+ +H + V++ + SRA +I ++I +Y A+ LF T W
Sbjct: 406 LSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNS 465
Query: 172 LAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXX--MMGSLRQGRDVHLIAVK 229
+ + G A LF +V SL G+ VH K
Sbjct: 466 MISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQK 525
Query: 230 LGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMEL 289
LG L ++ +M + R D+ SW S+I GC +G E++
Sbjct: 526 LG---------DLTSAFLRLETMSETR---------DLTSWNSVISGCASSGHHLESLRA 567
Query: 290 FRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMY 349
F+ M+ EG ++ DL+ + + G +G + GR HG +++ E D L NTL+ MY
Sbjct: 568 FQAMSREG-KIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMY 626
Query: 350 ADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSI 409
C A VF + + SW +I + + EVF+LFR + L+P ++
Sbjct: 627 GRCKDIESAVKVFGLISDPNLCSWNCVISA-LSQNKAGREVFQLFRNLK---LEPNEITF 682
Query: 410 SSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNE 469
+L A ++ S +G + H +L+R G + + VS A++DMY G + + VF
Sbjct: 683 VGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGV 742
Query: 470 KDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRV 529
+W+ +I HG G+ ++LF++L NSE + + + + L ACS + +EG
Sbjct: 743 NSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLS 802
Query: 530 CFNHIR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIH 584
+ + P+ H V +L R G EA FI Q V LL C H
Sbjct: 803 YYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYH 862
Query: 585 GEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLK 637
G+ LGK+V E L E+EP NA Y+ L N + G G + ++R+ + + LK
Sbjct: 863 GDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALK 915
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/559 (23%), Positives = 228/559 (40%), Gaps = 24/559 (4%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAAD 115
+FD+ E D + WN++I N + A+ F +M+ A
Sbjct: 144 LFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHL 203
Query: 116 FSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKL 175
LH A++ L + AL++LYA ++++ A+ +F W +
Sbjct: 204 SRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTK 263
Query: 176 YVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL--E 233
+ G PR +L+ F M + L G +H + +K G E
Sbjct: 264 CLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPE 323
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
V NS++ MY CG A VFE++ C+DV+S +++ G NG EA + +M
Sbjct: 324 AHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQM 383
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVL-LSNTLLKMYADC 352
++PD+ V ++ +CG + + GR +HGY VR ++ L + N+++ MY C
Sbjct: 384 QSVD-KIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKC 442
Query: 353 GASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSE--GLKPTAVSIS 410
G + A L+F+ + +VSW SMI + + GF ++ LF+++ SE K + ++
Sbjct: 443 GLTTQAELLFKTTTHRDLVSWNSMISAF-SQNGFTHKAKNLFKEVVSEYSCSKFSLSTVL 501
Query: 411 SILPACGRIASHKHGREIHGYLLRNG-------------VEFDINVSNAVIDMYVKSGAI 457
+IL +C S G+ +H +L + G D+ N+VI SG
Sbjct: 502 AILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHH 561
Query: 458 ACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDL----FRQLERNSEAPLDDNIYAA 513
+L F M+ + I ++ ++ G LG+ L F L S LD +
Sbjct: 562 LESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNT 621
Query: 514 ALHACSTARMFEEGRVCFNHIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEV 573
+ + E F I P + +S L++ E R K+E +
Sbjct: 622 LITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEIT 681
Query: 574 LRKLLEGCRIHGEYALGKQ 592
LL G + G Q
Sbjct: 682 FVGLLSASTQLGSTSYGMQ 700
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 182/383 (47%), Gaps = 7/383 (1%)
Query: 120 KQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLE 179
+ +H A+K L T L+ Y ++ + LFD+ W +
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 180 GMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFAS 239
G +A+ LF M+ + R+ +H +A++ GL G+
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC 226
Query: 240 NSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLS 299
N+L+ +Y ++ A VF M +D+VSW +++ C+ NG ++++ F+ M G
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMT--GSG 284
Query: 300 VKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGV--ECDVLLSNTLLKMYADCGASRD 357
+ D V S V+ C I L G +HG ++++G E V + N+++ MY+ CG +
Sbjct: 285 QEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEA 344
Query: 358 ARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNS-EGLKPTAVSISSILPAC 416
A VFE++ + V+S +++ G+ G F E F + +M S + ++P ++ SI C
Sbjct: 345 AETVFEELVCRDVISSNAILNGFAANGMFE-EAFGILNQMQSVDKIQPDIATVVSITSIC 403
Query: 417 GRIASHKHGREIHGYLLRNGVEF-DINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISW 475
G ++ + GR +HGY +R ++ + V N+VIDMY K G A +F +D +SW
Sbjct: 404 GDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSW 463
Query: 476 SMMIFGCSLHGQGKLGVDLFRQL 498
+ MI S +G +LF+++
Sbjct: 464 NSMISAFSQNGFTHKAKNLFKEV 486
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 206 bits (523), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 165/645 (25%), Positives = 275/645 (42%), Gaps = 85/645 (13%)
Query: 120 KQLHTHAVKLALSSRAHTLIA-LIHLYASLDDIAVAQTLFDKTA-PFGSDC--WTFLAKL 175
+Q+H + R+ +L A LI +YA L + A+ +F+ + SD W + K
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKA 132
Query: 176 YVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGE 235
V G+ +ALEL+ M +G R H +++GL+
Sbjct: 133 NVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKEN 192
Query: 236 VFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNL 295
+ N LL +Y G M DA +F +MP ++ +SW MI+G Q + A+++F M
Sbjct: 193 LHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQR 252
Query: 296 EGLSVKPDLVMVSTVLP-----------------------------------VCGMIGSL 320
E KPD V ++VL VC + +L
Sbjct: 253 E--EFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEAL 310
Query: 321 KHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGY 380
++HGY+++ G E + N L+ +Y G +DA +F Q+ +K + SW S+I +
Sbjct: 311 SIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSF 370
Query: 381 VKKG--------------------------------------GFNNEVFRLFRKMNSEGL 402
V G G ++ FR+M +
Sbjct: 371 VDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKV 430
Query: 403 KPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALN 462
+V+I IL C + + GREIHG+++R + +I V NA+++MY K G ++
Sbjct: 431 LANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSL 490
Query: 463 VFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTAR 522
VF + +KD ISW+ +I G +HG + + +F ++ + P D A L ACS A
Sbjct: 491 VFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHP-DGIALVAVLSACSHAG 549
Query: 523 MFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKL 577
+ E+GR F + P H A V LL R G EA ++ +E VL L
Sbjct: 550 LVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGAL 609
Query: 578 LEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLK 637
L CR+H + + + QL LEP +Y+LL N ++ G+ + +R +++ LK
Sbjct: 610 LNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLK 669
Query: 638 PKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEG 682
+W ++K + F +G + + I L+ + M +G
Sbjct: 670 KVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKG 714
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 205 bits (522), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 154/566 (27%), Positives = 255/566 (45%), Gaps = 50/566 (8%)
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
D G+ LH VK T AL+ +Y + + A + D+ G
Sbjct: 45 GDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAV 104
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
+ G R A +F G + G +H +A+K G E
Sbjct: 105 SGLLENGFCRDAFRMFG---DARVSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFE 161
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
EV+ SL+ MY CG A +FEK+P K VV++ + I G ++NG ++ +F M
Sbjct: 162 MEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLM 221
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCG 353
+ S +P+ V + C + +L++GR++HG +++ + + ++ L+ MY+ C
Sbjct: 222 R-KFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCR 280
Query: 354 ASRDARLVFEQMP-SKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVS---- 408
+ A +VF ++ ++ ++SW S+I G + G V LF K++SEGLKP + +
Sbjct: 281 CWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAV-ELFEKLDSEGLKPDSATWNSL 339
Query: 409 -------------------------------ISSILPACGRIASHKHGREIHGYLLRNGV 437
++S+L AC I + K+G+EIHG++++
Sbjct: 340 ISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAA 399
Query: 438 EFDINVSNAVIDMYVKSGAIACALNVFG--EMNEKDTISWSMMIFGCSLHGQGKLGVDLF 495
E DI V ++IDMY+K G + A +F E KD + W++MI G HG+ + +++F
Sbjct: 400 ERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIF 459
Query: 496 RQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR-----GPMIAHCAQKVSLLA 550
L P + A L ACS E+G F ++ P H + LL
Sbjct: 460 ELLREEKVEP-SLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLG 518
Query: 551 RCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVL 610
R G EA I +Q E V LL CR H + LG++ +L ELEP N +V+
Sbjct: 519 RSGRLREAKEVI-DQMSEPSSSVYSSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVI 577
Query: 611 LLNWHAGKGKLDMVDKIRETIRERGL 636
L + +A + + V+ IR+ I ++ L
Sbjct: 578 LSSIYAALERWEDVESIRQVIDQKQL 603
Score = 155 bits (393), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 221/438 (50%), Gaps = 19/438 (4%)
Query: 214 MGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSM 273
+G + QGR +H VK G +VF + +L+ MY+ + DA V ++MP + + S +
Sbjct: 44 LGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAA 103
Query: 274 IRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN 333
+ G ++NG +A +F + G + V V++VL CG ++ G ++H +++
Sbjct: 104 VSGLLENGFCRDAFRMFGDARVSGSGMNS--VTVASVLGGCG---DIEGGMQLHCLAMKS 158
Query: 334 GVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFN--NEVF 391
G E +V + +L+ MY+ CG A +FE++P K+VV++ + I G ++ G N VF
Sbjct: 159 GFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVF 218
Query: 392 RLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMY 451
L RK +SE +P V+ + + AC + + ++GR++HG +++ +F+ V A+IDMY
Sbjct: 219 NLMRKFSSE--EPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMY 276
Query: 452 VKSGAIACALNVFGEMNE-KDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNI 510
K A VF E+ + ++ ISW+ +I G ++GQ + V+LF +L+ P D
Sbjct: 277 SKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKP-DSAT 335
Query: 511 YAAALHACST-ARMFEEGRVCFNHIRGPMIAHCAQKVSLLARCGLF------DEAMVFIR 563
+ + + S ++ E + + M+ SLL+ C E +
Sbjct: 336 WNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVI 395
Query: 564 EQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDM 623
+ E+ VL L++ G + +++ ++ E +P + + ++++ + G+ +
Sbjct: 396 KAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRF-EPKPKDPVFWNVMISGYGKHGECES 454
Query: 624 VDKIRETIRERGLKPKKA 641
+I E +RE ++P A
Sbjct: 455 AIEIFELLREEKVEPSLA 472
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 141/308 (45%), Gaps = 16/308 (5%)
Query: 298 LSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRD 357
LS P+ +L C +G + GR +H +V+ G DV + L+ MY D
Sbjct: 25 LSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTD 84
Query: 358 ARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACG 417
A V ++MP + + S + + G ++ GF + FR+F G +V+++S+L CG
Sbjct: 85 ALKVLDEMPERGIASVNAAVSGLLEN-GFCRDAFRMFGDARVSGSGMNSVTVASVLGGCG 143
Query: 418 RIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSM 477
I + G ++H +++G E ++ V +++ MY + G A +F ++ K ++++
Sbjct: 144 DI---EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNA 200
Query: 478 MIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRGP 537
I G +G L +F + + S +D + A+ AC++ + GR + G
Sbjct: 201 FISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGR----QLHGL 256
Query: 538 MIAHCAQ--------KVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYAL 589
++ Q + + ++C + A + E K ++ ++ G I+G++
Sbjct: 257 VMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHET 316
Query: 590 GKQVIEQL 597
++ E+L
Sbjct: 317 AVELFEKL 324
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 202 bits (513), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 229/484 (47%), Gaps = 9/484 (1%)
Query: 223 VHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGE 282
+H +A+ G + E+ N L+ Y CG R VF+ M ++V++ T++I G ++N
Sbjct: 177 IHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENEL 236
Query: 283 LSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLS 342
+ + LF M GL V P+ V + L C + G++IH L + G+E ++ +
Sbjct: 237 HEDGLRLFSLMR-RGL-VHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIE 294
Query: 343 NTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGL 402
+ L+ MY+ CG+ DA +FE VS T ++ G + G E + F +M G+
Sbjct: 295 SALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGS-EEEAIQFFIRMLQAGV 353
Query: 403 KPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALN 462
+ A +S++L S G+++H +++ + V+N +I+MY K G + +
Sbjct: 354 EIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQT 413
Query: 463 VFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTAR 522
VF M +++ +SW+ MI + HG G + L+ ++ P D + + LHACS
Sbjct: 414 VFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVT-FLSLLHACSHVG 472
Query: 523 MFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKL 577
+ ++GR N ++ P H + +L R GL EA FI ++ ++ + L
Sbjct: 473 LIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQAL 532
Query: 578 LEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLK 637
L C HG+ +G+ EQL + P ++ ++L+ N ++ +GK K + ++ G+
Sbjct: 533 LGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVT 592
Query: 638 PKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEE 697
+ + K H F D HP+ + I L G M EG P F L ++
Sbjct: 593 KETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKRFILCYTGDD 652
Query: 698 RECT 701
R T
Sbjct: 653 RNGT 656
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 192/421 (45%), Gaps = 42/421 (9%)
Query: 240 NSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLS 299
NSLL +Y CG + DA +F++MP +DV+S + G ++N E L +RM G
Sbjct: 94 NSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG-- 151
Query: 300 VKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDAR 359
D ++ VL VC + IH + +G + ++ + N L+ Y CG S R
Sbjct: 152 -GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGR 210
Query: 360 LVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRI 419
VF+ M + V++ T++I G ++ + + RLF M + P +V+ S L AC
Sbjct: 211 GVFDGMSHRNVITLTAVISGLIEN-ELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGS 269
Query: 420 ASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMI 479
G++IH L + G+E ++ + +A++DMY K G+I A +F E D +S ++++
Sbjct: 270 QRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVIL 329
Query: 480 FGCSLHGQGKLGVDLF-RQLERNSEAPLDDNIYAAA---------------LHACSTARM 523
G + +G + + F R L+ E +D N+ +A LH+ R
Sbjct: 330 VGLAQNGSEEEAIQFFIRMLQAGVE--IDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRK 387
Query: 524 FEEGRVCFNHIRGPMIAHCAQKVSLLARCG-LFDEAMVFIREQKIEQHPEVLRKLLEGCR 582
F N + +++ ++CG L D VF R K ++ ++
Sbjct: 388 FSGNTFVNNGL-----------INMYSKCGDLTDSQTVFRRMPK--RNYVSWNSMIAAFA 434
Query: 583 IHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRE----RGLKP 638
HG ++ E++ LE + + L HA + ++DK RE + E G++P
Sbjct: 435 RHGHGLAALKLYEEMTTLE-VKPTDVTFLSLLHACS-HVGLIDKGRELLNEMKEVHGIEP 492
Query: 639 K 639
+
Sbjct: 493 R 493
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 127/314 (40%), Gaps = 3/314 (0%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAAD 115
VFD + + +I + N + F+ M R V A +
Sbjct: 212 VFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQR 271
Query: 116 FSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKL 175
G+Q+H K + S AL+ +Y+ I A T+F+ T T +
Sbjct: 272 IVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVG 331
Query: 176 YVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGE 235
G A++ F RM+ + SL G+ +H + +K G
Sbjct: 332 LAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGN 391
Query: 236 VFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNL 295
F +N L+ MY CG + D++ VF +MP ++ VSW SMI ++G A++L+ M
Sbjct: 392 TFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTT 451
Query: 296 EGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVR-NGVECDVLLSNTLLKMYADCGA 354
L VKP V ++L C +G + GRE+ + +G+E ++ M G
Sbjct: 452 --LEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGL 509
Query: 355 SRDARLVFEQMPSK 368
++A+ + +P K
Sbjct: 510 LKEAKSFIDSLPLK 523
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 154/603 (25%), Positives = 247/603 (40%), Gaps = 78/603 (12%)
Query: 151 IAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXX 210
IA A+ +FD + W + Y G+ + A+ LF ++
Sbjct: 20 IASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILST 79
Query: 211 XXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPC--KDVV 268
+G+++ GR + + ++ G + +NSL+ MY C A VF M C ++ V
Sbjct: 80 CASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEV 139
Query: 269 SWTS-------------------------------MIRGCVQNGELSEAMELFRRMNLEG 297
+W S MI G G+L + LF+ M LE
Sbjct: 140 TWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEM-LES 198
Query: 298 LSVKPDLVMVSTVLPVCGMIGS-LKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASR 356
KPD S+++ C S + +GR +H +++NG V N++L Y G+
Sbjct: 199 -EFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRD 257
Query: 357 DARL-------------------------------VFEQMPSKTVVSWTSMIRGYVKKGG 385
DA VF P K +V+WT+MI GY + G
Sbjct: 258 DAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGD 317
Query: 386 FNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSN 445
+ R F +M G+ + ++L AC +A HG+ IHG L+ G + V N
Sbjct: 318 -GEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGN 376
Query: 446 AVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAP 505
A++++Y K G I A FG++ KD +SW+ M+F +HG + L+ + + P
Sbjct: 377 ALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKP 436
Query: 506 LDDNIYAAALHACSTARMFEEGRVCFNHI----RGPM-IAHCAQKVSLLARCGLFDE--- 557
D+ + L CS + + EEG + F + R P+ + H + + R G E
Sbjct: 437 -DNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKD 495
Query: 558 -AMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHA 616
A + + LL C H LG++V + L EP ++VLL N +
Sbjct: 496 LATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYC 555
Query: 617 GKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFME 676
G+ + +R + ERG+K C+W +V F GD SHPR +E+ L
Sbjct: 556 STGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQH 615
Query: 677 EMR 679
EMR
Sbjct: 616 EMR 618
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 159/378 (42%), Gaps = 73/378 (19%)
Query: 250 GSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVST 309
G + AR VF+ MP D V+W +M+ + G EA+ LF ++ KPD +
Sbjct: 18 GRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFS--DAKPDDYSFTA 75
Query: 310 VLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFE------ 363
+L C +G++K GR+I ++R+G + ++N+L+ MY C + A VF
Sbjct: 76 ILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDS 135
Query: 364 ---------------------------QMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRK 396
+MP + +W MI G+ G + LF++
Sbjct: 136 RNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES-CLSLFKE 194
Query: 397 MNSEGLKPTAVSISSILPACGRIASH-KHGREIHGYLLRNGVEFDINVSNAVIDMYVKSG 455
M KP + SS++ AC +S+ +GR +H +L+NG + N+V+ Y K G
Sbjct: 195 MLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLG 254
Query: 456 A-----------------------IAC--------ALNVFGEMNEKDTISWSMMIFGCSL 484
+ AC AL VF EK+ ++W+ MI G
Sbjct: 255 SRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGR 314
Query: 485 HGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRV---CFNHIRGPMIAH 541
+G G+ + F ++ + S D Y A LHACS + G++ C H A+
Sbjct: 315 NGDGEQALRFFVEMMK-SGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAY 373
Query: 542 CAQK-VSLLARCGLFDEA 558
V+L A+CG EA
Sbjct: 374 VGNALVNLYAKCGDIKEA 391
Score = 126 bits (317), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 125/543 (23%), Positives = 212/543 (39%), Gaps = 72/543 (13%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
QVFD PE DT+AWNT++ ++ AI+ FTQ+
Sbjct: 25 QVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLG 84
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSD--CW--- 169
+ G+++ + ++ + +LI +Y D A +F + W
Sbjct: 85 NVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSL 144
Query: 170 --------TFLAKLYVLEGMPR--------------------SALELFHRMVXXXXXXXX 201
F A L V MP+ S L LF M+
Sbjct: 145 LFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDC 204
Query: 202 XXXXXXXXXXXMMGS-LRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFE 260
S + GR VH + +K G V A NS+L Y GS DA E
Sbjct: 205 YTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELE 264
Query: 261 KMPCKDVVSWTSMIRGCVQNGELSEAMELFR---------------------------RM 293
+ VSW S+I C++ GE +A+E+F R
Sbjct: 265 SIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRF 324
Query: 294 NLEGL--SVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYAD 351
+E + V D VL C + L HG+ IHG L+ G + + N L+ +YA
Sbjct: 325 FVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAK 384
Query: 352 CGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISS 411
CG ++A F + +K +VSW +M+ + G ++ +L+ M + G+KP V+
Sbjct: 385 CGDIKEADRAFGDIANKDLVSWNTMLFAF-GVHGLADQALKLYDNMIASGIKPDNVTFIG 443
Query: 412 ILPACGRIASHKHGREIHGYLLRN-GVEFDINVSNAVIDMYVKSGAIACALNVFGE---- 466
+L C + G I ++++ + +++ +IDM+ + G +A A ++
Sbjct: 444 LLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSL 503
Query: 467 -MNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFE 525
+ + SW ++ CS H +LG ++ + L+ + + + L+ CST R ++
Sbjct: 504 VTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLY-CSTGR-WK 561
Query: 526 EGR 528
EG
Sbjct: 562 EGE 564
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 3/153 (1%)
Query: 350 ADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSI 409
A G AR VF+ MP V+W +M+ Y + G + E LF ++ KP S
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSY-SRLGLHQEAIALFTQLRFSDAKPDDYSF 73
Query: 410 SSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEM-- 467
++IL C + + K GR+I ++R+G + V+N++IDMY K A VF +M
Sbjct: 74 TAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCC 133
Query: 468 NEKDTISWSMMIFGCSLHGQGKLGVDLFRQLER 500
+ ++ ++W ++F Q + +D+F ++ +
Sbjct: 134 DSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPK 166
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 140/468 (29%), Positives = 223/468 (47%), Gaps = 17/468 (3%)
Query: 219 QGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCV 278
QG +H + G +++ S ++ MY G M AR F++MP + VSWT++I G +
Sbjct: 96 QGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYI 155
Query: 279 QNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECD 338
+ GEL A +LF +M VK D+V+ + ++ G + R + + V
Sbjct: 156 RCGELDLASKLFDQMP----HVK-DVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTV--- 207
Query: 339 VLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMN 398
+ T++ Y + AR +F+ MP + +VSW +MI GY + E RLF++M
Sbjct: 208 -ITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQ-PQEGIRLFQEMQ 265
Query: 399 -SEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAI 457
+ L P V+I S+LPA + G H ++ R ++ + V A++DMY K G I
Sbjct: 266 ATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEI 325
Query: 458 ACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHA 517
A +F EM EK SW+ MI G +L+G + +DLF + E P D+ A + A
Sbjct: 326 EKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM-MIEEKP-DEITMLAVITA 383
Query: 518 CSTARMFEEGRVCFNHIR----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEV 573
C+ + EEGR F+ +R I H V LL R G EA I E + +
Sbjct: 384 CNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGII 443
Query: 574 LRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRE 633
L L C + + ++++++ ELEP N NYVLL N +A + D ++ +R+
Sbjct: 444 LSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRK 503
Query: 634 RGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTE 681
K + C+ V F +GD +HP ++ I L + M E
Sbjct: 504 NQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEE 551
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 138/389 (35%), Gaps = 54/389 (13%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQM--LRHAVXXXXXXXXXXXXASRL 112
FD+ P ++W LI ++ LA F QM ++ V
Sbjct: 134 NAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMT 193
Query: 113 AADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFL 172
+A + H + T +IH Y ++ DI A+ LFD W +
Sbjct: 194 SARRLFDEMTHKTVI---------TWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTM 244
Query: 173 AKLYVLEGMPRSALELFHRM-VXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLG 231
Y P+ + LF M G+L G H +
Sbjct: 245 IGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKK 304
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFR 291
L+ +V ++L MY CG + A+ +F++MP K V SW +MI G NG A++LF
Sbjct: 305 LDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFV 364
Query: 292 RMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYAD 351
M +E KPD + + V+ C G ++ GR+ + G+ + ++ +
Sbjct: 365 TMMIEE---KPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGR 421
Query: 352 CGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISS 411
G+ ++A + MP +P + +SS
Sbjct: 422 AGSLKEAEDLITNMP-----------------------------------FEPNGIILSS 446
Query: 412 ILPACGRIASHKHGREIHGYLLRNGVEFD 440
L ACG+ + I L+ VE +
Sbjct: 447 FLSACGQYKDIERAERI----LKKAVELE 471
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 140/320 (43%), Gaps = 14/320 (4%)
Query: 255 ARLVFEKMPCKDVVSWT-SMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPV 313
AR +F++ P +D + SMI+ ++ + ++ L+R + E PD +T+
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKE-TCFAPDNFTFTTLTKS 87
Query: 314 CGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSW 373
C + + G ++H + R G D+ +S ++ MYA G AR F++MP ++ VSW
Sbjct: 88 CSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSW 147
Query: 374 TSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLL 433
T++I GY++ G + +LF +M V ++++ + R + +
Sbjct: 148 TALISGYIRCGEL-DLASKLFDQMPH---VKDVVIYNAMMDGFVKSGDMTSARRLFDEMT 203
Query: 434 RNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVD 493
V +I Y I A +F M E++ +SW+ MI G + Q + G+
Sbjct: 204 HKTV----ITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIR 259
Query: 494 LFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR----GPMIAHCAQKVSLL 549
LF++++ + DD + L A S G C ++ + C + +
Sbjct: 260 LFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMY 319
Query: 550 ARCGLFDEAMVFIREQKIEQ 569
++CG ++A E +Q
Sbjct: 320 SKCGEIEKAKRIFDEMPEKQ 339
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 8/203 (3%)
Query: 330 LVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK--TVVSWTSMIRGYVKKGGFN 387
++R+ +E +V + L + A AR +F+Q P + + +S SMI+ Y++ +
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLS-NSMIKAYLETRQYP 59
Query: 388 NEVFRLFRKMNSEG-LKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNA 446
+ F L+R + E P + +++ +C G ++H + R G D+ VS
Sbjct: 60 DS-FALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTG 118
Query: 447 VIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPL 506
V+DMY K G + CA N F EM + +SW+ +I G G+ L LF Q+ + +
Sbjct: 119 VVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVI 178
Query: 507 DDNI---YAAALHACSTARMFEE 526
+ + + + S R+F+E
Sbjct: 179 YNAMMDGFVKSGDMTSARRLFDE 201
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/520 (26%), Positives = 236/520 (45%), Gaps = 51/520 (9%)
Query: 169 WTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAV 228
+ L K +V P +LEL+ RM+ + H+
Sbjct: 839 YNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIW-- 896
Query: 229 KLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAME 288
K G V +L+ Y G +R+AR VF++MP +D ++WT+M+ + ++ A
Sbjct: 897 KFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANS 956
Query: 289 LFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKM 348
L +M+ E + SN L+
Sbjct: 957 LANQMS-----------------------------------------EKNEATSNCLING 975
Query: 349 YADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVS 408
Y G A +F QMP K ++SWT+MI+GY + + E +F KM EG+ P V+
Sbjct: 976 YMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYR-EAIAVFYKMMEEGIIPDEVT 1034
Query: 409 ISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMN 468
+S+++ AC + + G+E+H Y L+NG D+ + +A++DMY K G++ AL VF +
Sbjct: 1035 MSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLP 1094
Query: 469 EKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGR 528
+K+ W+ +I G + HG + + +F ++E S P + + + AC+ A + +EGR
Sbjct: 1095 KKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKP-NAVTFVSVFTACTHAGLVDEGR 1153
Query: 529 VCFNHIRGPM-----IAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRI 583
+ + + H V L ++ GL EA+ I + E + + LL+GCRI
Sbjct: 1154 RIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRI 1213
Query: 584 HGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACT 643
H + + +L LEP+N+ Y LL++ +A + + V +IR +RE G++ T
Sbjct: 1214 HKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGT 1273
Query: 644 WTLYREKV-HVFGTGDVSHPRKKEICSALQGFMEEMRTEG 682
++ +K H+F D SH E+C L ++M G
Sbjct: 1274 SSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAG 1313
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 195/426 (45%), Gaps = 46/426 (10%)
Query: 62 EWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAADFSLGKQ 121
E + +N L ++ +H ++ + +MLR +V AS A+ F G+
Sbjct: 833 EPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRF--GES 890
Query: 122 LHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGM 181
L H K LI Y++ I A+ +FD+ WT + Y
Sbjct: 891 LQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAY----- 945
Query: 182 PRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNS 241
R L++ + +A ++ + E SN
Sbjct: 946 -RRVLDM--------------------------------DSANSLANQMSEKNEA-TSNC 971
Query: 242 LLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVK 301
L+ Y+ G++ A +F +MP KD++SWT+MI+G QN EA+ +F +M EG +
Sbjct: 972 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG--II 1029
Query: 302 PDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLV 361
PD V +STV+ C +G L+ G+E+H Y ++NG DV + + L+ MY+ CG+ A LV
Sbjct: 1030 PDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLV 1089
Query: 362 FEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIAS 421
F +P K + W S+I G + GF E ++F KM E +KP AV+ S+ AC
Sbjct: 1090 FFNLPKKNLFCWNSIIEG-LAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGL 1148
Query: 422 HKHGREIHGYLLRN-GVEFDINVSNAVIDMYVKSGAIACALNVFGEMN-EKDTISWSMMI 479
GR I+ ++ + + ++ ++ ++ K+G I AL + G M E + + W ++
Sbjct: 1149 VDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALL 1208
Query: 480 FGCSLH 485
GC +H
Sbjct: 1209 DGCRIH 1214
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 201 bits (511), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 150/533 (28%), Positives = 241/533 (45%), Gaps = 73/533 (13%)
Query: 215 GSLRQGRDVHLIAVKLGLE-GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSM 273
G LR G+ + V G+ EV + +S++ Y G + DAR +F++M ++V++WT+M
Sbjct: 186 GYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAM 245
Query: 274 IRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN 333
I G + G + LF RM EG VK + ++ + C + G +IHG + R
Sbjct: 246 IDGYFKAGFFEDGFGLFLRMRQEG-DVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRM 304
Query: 334 GVECDVLLSNTLLKMYADCGASRDARLVF------------------------------- 362
+E D+ L N+L+ MY+ G +A+ VF
Sbjct: 305 PLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELF 364
Query: 363 EQMPSKTVVSWTSMIRGYVKKG------------------------------GFNNEVFR 392
E+MP K +VSWT MI+G+ KG G+ E
Sbjct: 365 EKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALC 424
Query: 393 LFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYV 452
F KM + + P + + SS+L A +A G +IHG +++ + D++V N+++ MY
Sbjct: 425 WFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYC 484
Query: 453 KSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYA 512
K G A +F ++E + +S++ MI G S +G GK + LF LE + + P + +
Sbjct: 485 KCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEP-NGVTFL 543
Query: 513 AALHACSTA-------RMFEEGRVCFNHIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQ 565
A L AC + F+ + +N GP H A V LL R GL D+A I
Sbjct: 544 ALLSACVHVGYVDLGWKYFKSMKSSYNIEPGP--DHYACMVDLLGRSGLLDDASNLISTM 601
Query: 566 KIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVD 625
+ H V LL + H L + ++L ELEP +A YV+L ++ GK D
Sbjct: 602 PCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCD 661
Query: 626 KIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEM 678
+I + + +K +W + + +VH F GD S +EI L+ +EM
Sbjct: 662 RIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFTLKMIRKEM 714
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 151/320 (47%), Gaps = 59/320 (18%)
Query: 236 VFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNL 295
+F NS + + G++++A +F +M + +VSW +MI +NG++S+A ++F M +
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 296 EGLSVKPDLVMVSTVLPVCGM------------IGSLKHGREIHGYL------------- 330
++ + ++ + + C + ++ + I G++
Sbjct: 110 R-VTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYA 168
Query: 331 -----VRNGVECDVLLS--------------------------NTLLKMYADCGASRDAR 359
R+ V +VLLS ++++ Y G DAR
Sbjct: 169 ETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDAR 228
Query: 360 LVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEG-LKPTAVSISSILPACGR 418
+F++M + V++WT+MI GY K GF + F LF +M EG +K + +++ + AC
Sbjct: 229 SLFDRMTERNVITWTAMIDGYF-KAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRD 287
Query: 419 IASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMM 478
++ G +IHG + R +EFD+ + N+++ MY K G + A VFG M KD++SW+ +
Sbjct: 288 FVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSL 347
Query: 479 IFGCSLHGQGKLGVDLFRQL 498
I G Q +LF ++
Sbjct: 348 ITGLVQRKQISEAYELFEKM 367
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 2/183 (1%)
Query: 141 LIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXX 200
+I ++ +I+ LF + WT + +V G AL FH+M+
Sbjct: 378 MIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPN 437
Query: 201 XXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFE 260
+ L +G +H VK+ + ++ NSL+ MY CG+ DA +F
Sbjct: 438 SYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFS 497
Query: 261 KMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSL 320
+ ++VS+ +MI G NG +A++LF LE +P+ V +L C +G +
Sbjct: 498 CISEPNIVSYNTMISGYSYNGFGKKALKLFSM--LESSGKEPNGVTFLALLSACVHVGYV 555
Query: 321 KHG 323
G
Sbjct: 556 DLG 558
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 201 bits (511), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 232/486 (47%), Gaps = 44/486 (9%)
Query: 223 VHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGE 282
+H ++ + + F L+++ S+ A VF + +V +T+MI G V +G
Sbjct: 48 IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGR 107
Query: 283 LSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGV------- 335
++ + L+ RM SV PD ++++VL C LK REIH +++ G
Sbjct: 108 SADGVSLYHRMIHN--SVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVG 161
Query: 336 ------------------------ECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVV 371
+ D + + ++ Y++CG ++A +F+ + K V
Sbjct: 162 LKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTV 221
Query: 372 SWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGY 431
WT+MI G V+ N + LFR+M E + + +L AC + + + GR +H +
Sbjct: 222 CWTAMIDGLVRNKEMN-KALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSF 280
Query: 432 LLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLG 491
+ +E V NA+I+MY + G I A VF M +KD IS++ MI G ++HG
Sbjct: 281 VENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEA 340
Query: 492 VDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR-----GPMIAHCAQKV 546
++ FR + P + A L+ACS + + G FN ++ P I H V
Sbjct: 341 INEFRDMVNRGFRP-NQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIV 399
Query: 547 SLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAE 606
LL R G +EA FI IE +L LL C+IHG LG+++ ++L E E ++
Sbjct: 400 DLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSG 459
Query: 607 NYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKE 666
YVLL N +A GK +IRE++R+ G++ + C+ ++H F GD++HP K+
Sbjct: 460 TYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEA 519
Query: 667 ICSALQ 672
I LQ
Sbjct: 520 IYQRLQ 525
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 180/432 (41%), Gaps = 47/432 (10%)
Query: 122 LHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGM 181
+H ++ A + LI + ++LD + A +F + +T + +V G
Sbjct: 48 IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGR 107
Query: 182 PRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNS 241
+ L+HRM+ L+ R++H +KLG
Sbjct: 108 SADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLK 163
Query: 242 LLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEA--------------- 286
++++Y G + +A+ +F++MP +D V+ T MI + G + EA
Sbjct: 164 MMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCW 223
Query: 287 ----------------MELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYL 330
+ELFR M +E +S VL C +G+L+ GR +H ++
Sbjct: 224 TAMIDGLVRNKEMNKALELFREMQMENVSANE--FTAVCVLSACSDLGALELGRWVHSFV 281
Query: 331 VRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEV 390
+E + N L+ MY+ CG +AR VF M K V+S+ +MI G G + E
Sbjct: 282 ENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGA-SVEA 340
Query: 391 FRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRN-GVEFDINVSNAVID 449
FR M + G +P V++ ++L AC G E+ + R VE I ++D
Sbjct: 341 INEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVD 400
Query: 450 MYVKSGAIACALNVFGEMN-EKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAP--- 505
+ + G + A + E D I ++ C +HG +LG + ++L SE P
Sbjct: 401 LLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRL-FESENPDSG 459
Query: 506 ---LDDNIYAAA 514
L N+YA++
Sbjct: 460 TYVLLSNLYASS 471
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 127/345 (36%), Gaps = 38/345 (11%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
+ VF + + +I +S+ +S + +M+ ++V A
Sbjct: 81 YDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKA---- 136
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFG-------- 165
D + +++H +KL S + ++ +Y ++ A+ +FD+
Sbjct: 137 CDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMI 196
Query: 166 -----------------------SDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXX 202
+ CWT + V ALELF M
Sbjct: 197 NCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEF 256
Query: 203 XXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKM 262
+G+L GR VH +E F N+L+ MY CG + +AR VF M
Sbjct: 257 TAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVM 316
Query: 263 PCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKH 322
KDV+S+ +MI G +G EA+ FR M G +P+ V + +L C G L
Sbjct: 317 RDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGF--RPNQVTLVALLNACSHGGLLDI 374
Query: 323 GREIHGYLVRN-GVECDVLLSNTLLKMYADCGASRDARLVFEQMP 366
G E+ + R VE + ++ + G +A E +P
Sbjct: 375 GLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIP 419
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 130/312 (41%), Gaps = 42/312 (13%)
Query: 309 TVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK 368
T++ V ++ H IH ++R + D + L+++ + + A VF + +
Sbjct: 31 TLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNP 90
Query: 369 TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREI 428
V +T+MI G+V G + V L+ +M + P I+S+L AC K REI
Sbjct: 91 NVYLYTAMIDGFVSSGRSADGV-SLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREI 145
Query: 429 HGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNE------------------- 469
H +L+ G +V ++++Y KSG + A +F EM +
Sbjct: 146 HAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFI 205
Query: 470 ------------KDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHA 517
KDT+ W+ MI G + + ++LFR+++ + + ++ L A
Sbjct: 206 KEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSA-NEFTAVCVLSA 264
Query: 518 CSTARMFEEGRVCFNHIRGPMIAHC----AQKVSLLARCGLFDEAMVFIREQKIEQHPEV 573
CS E GR + + + +++ +RCG +EA R + ++
Sbjct: 265 CSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMR-DKDVIS 323
Query: 574 LRKLLEGCRIHG 585
++ G +HG
Sbjct: 324 YNTMISGLAMHG 335
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 200 bits (509), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 203/390 (52%), Gaps = 7/390 (1%)
Query: 258 VFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMI 317
VF MP +++ SW +I ++G S++++LF RM E V+PD + +L C
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRES-CVRPDDFTLPLILRACSAS 147
Query: 318 GSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMI 377
K G IH ++ G + +S+ L+ MY D G AR +F+ MP + V +T+M
Sbjct: 148 REAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMF 207
Query: 378 RGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGV 437
GYV++G + +FR+M G +V + S+L ACG++ + KHG+ +HG+ +R
Sbjct: 208 GGYVQQGEAMLGL-AMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCS 266
Query: 438 EFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQ 497
+N+ NA+ DMYVK + A VF M+ +D ISWS +I G L G + LF +
Sbjct: 267 CLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDE 326
Query: 498 LERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG----PMIAHCAQKVSLLARCG 553
+ + P + + L AC+ + E+ + F ++ P + H A ++R G
Sbjct: 327 MLKEGIEP-NAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAG 385
Query: 554 LFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLN 613
L +EA F+ + ++ V+ +L GC+++G +G++V +L +L+P A YV L
Sbjct: 386 LLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAG 445
Query: 614 WHAGKGKLDMVDKIRETIRERGLKPKKACT 643
++ G+ D + +R+ ++E+ + C+
Sbjct: 446 LYSAAGRFDEAESLRQWMKEKQISKVPGCS 475
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 160/320 (50%), Gaps = 24/320 (7%)
Query: 218 RQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGC 277
+ G +H++ +KLG +F S++L+ MYVD G + AR +F+ MP +D V +T+M G
Sbjct: 151 KSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGY 210
Query: 278 VQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVEC 337
VQ GE + +FR M G ++ D V++ ++L CG +G+LKHG+ +HG+ +R
Sbjct: 211 VQQGEAMLGLAMFREMGYSGFAL--DSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCL 268
Query: 338 DVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEV---FRLF 394
+ L N + MY C A VF M + V+SW+S+I GY G + +V F+LF
Sbjct: 269 GLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGY----GLDGDVVMSFKLF 324
Query: 395 RKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINV------SNAVI 448
+M EG++P AV+ +L AC HG + L + + N+ +V
Sbjct: 325 DEMLKEGIEPNAVTFLGVLSACA------HGGLVEKSWLYFRLMQEYNIVPELKHYASVA 378
Query: 449 DMYVKSGAIACALNVFGEMNEK-DTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLD 507
D ++G + A +M K D ++ GC ++G ++G + R+L + P
Sbjct: 379 DCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQ--LKPRK 436
Query: 508 DNIYAAALHACSTARMFEEG 527
+ Y S A F+E
Sbjct: 437 ASYYVTLAGLYSAAGRFDEA 456
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 130/323 (40%), Gaps = 19/323 (5%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHA-VXXXXXXXXXXXXASRLA 113
VF P + +WN +I + +I F +M R + V A +
Sbjct: 88 SVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSAS 147
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
+ G +H +KL SS AL+ +Y + + A+ LFD S +T +
Sbjct: 148 REAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMF 207
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVK---- 229
YV +G L +F M +G+L+ G+ VH ++
Sbjct: 208 GGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSC 267
Query: 230 LGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMEL 289
LGL N++ MYV C + A VF M +DV+SW+S+I G +G++ + +L
Sbjct: 268 LGLN----LGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKL 323
Query: 290 FRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMY 349
F M EG ++P+ V VL C G L ++ L++ E +++
Sbjct: 324 FDEMLKEG--IEPNAVTFLGVLSACAH-GGLVEKSWLYFRLMQ---EYNIVPELKHYASV 377
Query: 350 ADC----GASRDARLVFEQMPSK 368
ADC G +A E MP K
Sbjct: 378 ADCMSRAGLLEEAEKFLEDMPVK 400
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 200 bits (509), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 149/598 (24%), Positives = 271/598 (45%), Gaps = 25/598 (4%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAAD 115
VFD+ P+ D +AW +I H+ N + +M H+ A
Sbjct: 183 VFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKM--HSAGSDVDKPNPRTLECGFQAC 240
Query: 116 FSLG-----KQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWT 170
+LG + LH AVK L+S ++ Y+ + + A F + WT
Sbjct: 241 SNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWT 300
Query: 171 FLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKL 230
+ G + ++F M M + QG+ H ++
Sbjct: 301 SIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRH 360
Query: 231 GLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCK-----DVVSWTSMIRGCVQNGELSE 285
+ NSLL MY + V EK+ C+ + +W +M++G + +
Sbjct: 361 CFSLDSTVCNSLLSMYCKFELLS----VAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVK 416
Query: 286 AMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTL 345
+ELFR+ ++ L ++ D ++V+ C IG++ G+ +H Y+V+ ++ + + N+L
Sbjct: 417 CIELFRK--IQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSL 474
Query: 346 LKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPT 405
+ +Y G A +F + + V++W +MI YV + + LF +M SE KP+
Sbjct: 475 IDLYGKMGDLTVAWRMFCEADTN-VITWNAMIASYVHCEQ-SEKAIALFDRMVSENFKPS 532
Query: 406 AVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFG 465
++++ ++L AC S + G+ IH Y+ E ++++S A+IDMY K G + + +F
Sbjct: 533 SITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFD 592
Query: 466 EMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFE 525
N+KD + W++MI G +HG + + LF Q+E + P + A L AC+ A + E
Sbjct: 593 AGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPT-FLALLSACTHAGLVE 651
Query: 526 EGRVCF----NHIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGC 581
+G+ F + P + H + V LL+R G +EA + + LL C
Sbjct: 652 QGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSC 711
Query: 582 RIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPK 639
HGE+ +G ++ E+ +P N Y++L N ++ GK + ++ RE +RE G+ +
Sbjct: 712 MTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKR 769
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 132/596 (22%), Positives = 262/596 (43%), Gaps = 18/596 (3%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VF D WN++I H SN + ++ F ML A
Sbjct: 80 RVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELL 139
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIA-LIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
F +G +H +K R + A ++ Y+ + A +FD+ WT +
Sbjct: 140 WFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAII 199
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXX---XXXXMMGSLRQGRDVHLIAVKL 230
+V G L +M +G+L++GR +H AVK
Sbjct: 200 SGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKN 259
Query: 231 GLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELF 290
GL F +S+ Y G+ +A L F ++ +D+ SWTS+I ++G++ E+ ++F
Sbjct: 260 GLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMF 319
Query: 291 RRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYA 350
M +G+ PD V++S ++ G + + G+ HG+++R+ D + N+LL MY
Sbjct: 320 WEMQNKGM--HPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYC 377
Query: 351 DCGASRDARLVFEQMPSK-TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSI 409
A +F ++ + +W +M++GY K + + LFRK+ + G++ + S
Sbjct: 378 KFELLSVAEKLFCRISEEGNKEAWNTMLKGY-GKMKCHVKCIELFRKIQNLGIEIDSASA 436
Query: 410 SSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNE 469
+S++ +C I + G+ +H Y+++ ++ I+V N++ID+Y K G + A +F E +
Sbjct: 437 TSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEA-D 495
Query: 470 KDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRV 529
+ I+W+ MI Q + + LF ++ + P + L AC E G++
Sbjct: 496 TNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITL-VTLLMACVNTGSLERGQM 554
Query: 530 CFNHIRGP----MIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHG 585
+I ++ A + + A+CG +++ + ++ ++ G +HG
Sbjct: 555 IHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELF-DAGNQKDAVCWNVMISGYGMHG 613
Query: 586 EYALGKQVIEQLCE--LEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPK 639
+ + +Q+ E ++P ++ LL+ G ++ K+ + + +KP
Sbjct: 614 DVESAIALFDQMEESDVKP-TGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPN 668
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 159/331 (48%), Gaps = 12/331 (3%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIR 275
SL R + + + GL +F ++ L+ Y G + VF + +D+ W S+I+
Sbjct: 39 SLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIK 98
Query: 276 GCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN-G 334
NG+ + ++ F M L G S PD V+ C + G +HG ++++ G
Sbjct: 99 AHFSNGDYARSLCFFFSMLLSGQS--PDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGG 156
Query: 335 VECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLF 394
+ + + + + Y+ CG +DA LVF++MP + VV+WT++I G+V+ G + L
Sbjct: 157 FDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLC 216
Query: 395 RKMNSEGL---KPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMY 451
KM+S G KP ++ AC + + K GR +HG+ ++NG+ V +++ Y
Sbjct: 217 -KMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFY 275
Query: 452 VKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIY 511
KSG + A F E+ ++D SW+ +I + G + D+F +++ P D +
Sbjct: 276 SKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHP-DGVVI 334
Query: 512 AAALHACSTARMFEEGRVCFNHIRGPMIAHC 542
+ ++ + +G+ G +I HC
Sbjct: 335 SCLINELGKMMLVPQGKA----FHGFVIRHC 361
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 101/221 (45%), Gaps = 8/221 (3%)
Query: 313 VCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVS 372
+C SL+ R+ + ++ G+ ++ +++ L+ YA G + VF + + +
Sbjct: 33 LCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFL 92
Query: 373 WTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYL 432
W S+I+ + G + + F + S G P + ++ AC + G +HG +
Sbjct: 93 WNSIIKAHFSNGDYARSLCFFFSMLLS-GQSPDHFTAPMVVSACAELLWFHVGTFVHGLV 151
Query: 433 LRNGVEFDIN--VSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKL 490
L++G FD N V + + Y K G + A VF EM ++D ++W+ +I G +G+ +
Sbjct: 152 LKHG-GFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEG 210
Query: 491 GVDLFRQLE---RNSEAPLDDNIYAAALHACSTARMFEEGR 528
G+ ++ + + P + ACS +EGR
Sbjct: 211 GLGYLCKMHSAGSDVDKP-NPRTLECGFQACSNLGALKEGR 250
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 200 bits (508), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 209/435 (48%), Gaps = 13/435 (2%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIR 275
+++ G +H + VK GLE F S SL+ Y CG + +AR VFE + +D+V W +++
Sbjct: 157 NMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVS 216
Query: 276 GCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGV 335
V NG + EA L + M + + D S++L C ++ G++IH L +
Sbjct: 217 SYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSY 272
Query: 336 ECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFR 395
+ D+ ++ LL MYA DAR FE M + VVSW +MI G+ + G E RLF
Sbjct: 273 QFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGE-GREAMRLFG 331
Query: 396 KMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSG 455
+M E L+P ++ +S+L +C + ++ +++ + + G ++V+N++I Y ++G
Sbjct: 332 QMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNG 391
Query: 456 AIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAAL 515
++ AL F + E D +SW+ +I + HG + + +F + + + D + L
Sbjct: 392 NLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQP--DKITFLEVL 449
Query: 516 HACSTARMFEEGRVCFNHIR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQH 570
ACS + +EG CF + H + LL R G DEA + E
Sbjct: 450 SACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPS 509
Query: 571 PEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRET 630
L GC IH + K ++L E+EP NY +L N + +G + +R+
Sbjct: 510 THALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKR 569
Query: 631 IRERGLKPKK-ACTW 644
R PK C+W
Sbjct: 570 ERRNCYNPKTPGCSW 584
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 206/454 (45%), Gaps = 54/454 (11%)
Query: 224 HLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQ-NGE 282
H VK G+ +F N LL+ Y DA +F++MP +++V+W +I G +Q +G+
Sbjct: 59 HGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGD 118
Query: 283 LSEAMEL----FRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECD 338
+ L R+ +S+ D V ++ +C ++K G ++H +V+ G+E
Sbjct: 119 TNHRAHLGFCYLSRILFTDVSL--DHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESS 176
Query: 339 VLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMN 398
S +L+ Y CG +AR VFE + + +V W +++ YV G +E F L + M
Sbjct: 177 CFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMI-DEAFGLLKLMG 235
Query: 399 SEG--LKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGA 456
S+ + + SS+L AC RI + G++IH L + +FDI V+ A+++MY KS
Sbjct: 236 SDKNRFRGDYFTFSSLLSAC-RI---EQGKQIHAILFKVSYQFDIPVATALLNMYAKSNH 291
Query: 457 IACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALH 516
++ A F M ++ +SW+ MI G + +G+G+ + LF Q+ + P D+ +A+ L
Sbjct: 292 LSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQP-DELTFASVLS 350
Query: 517 AC-----------------------------------STARMFEEGRVCFNHIRGPMIAH 541
+C S E +CF+ IR P +
Sbjct: 351 SCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVS 410
Query: 542 CAQKVSLLARCGLFDEAMVFIRE--QKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCE 599
+ LA G +E++ QK++ ++L C G G + +++ E
Sbjct: 411 WTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTE 470
Query: 600 LEPLNAEN--YVLLLNWHAGKGKLDMVDKIRETI 631
+ AE+ Y L++ G +D + ++
Sbjct: 471 FYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSM 504
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 132/506 (26%), Positives = 216/506 (42%), Gaps = 49/506 (9%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHL-----SNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXA 109
++FD+ P + + WN LIH + +N+ L +++L V
Sbjct: 92 KLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRL 151
Query: 110 SRLAADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCW 169
+ + G QLH VK L S +L+H Y I A+ +F+ W
Sbjct: 152 CTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLW 211
Query: 170 TFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLR--QGRDVHLIA 227
L YVL GM A L M ++ + R QG+ +H I
Sbjct: 212 NALVSSYVLNGMIDEAFGLLKLM----GSDKNRFRGDYFTFSSLLSACRIEQGKQIHAIL 267
Query: 228 VKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAM 287
K+ + ++ + +LL MY + DAR FE M ++VVSW +MI G QNGE EAM
Sbjct: 268 FKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAM 327
Query: 288 ELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLK 347
LF +M LE L +PD + ++VL C ++ +++ + + G + ++N+L+
Sbjct: 328 RLFGQMLLENL--QPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLIS 385
Query: 348 MYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAV 407
Y+ G +A L F + +VSWTS+I G + GF E ++F M + L+P +
Sbjct: 386 SYSRNGNLSEALLCFHSIREPDLVSWTSVI-GALASHGFAEESLQMFESM-LQKLQPDKI 443
Query: 408 SISSILPACGRIASHKHGREIHGYLLRNG------------VEFDINVSNAVIDMYVKSG 455
+ +L AC HG L++ G +E + +ID+ ++G
Sbjct: 444 TFLEVLSACS-----------HGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAG 492
Query: 456 AIACALNVFGEM-NEKDTISWSMMIFGCSLHGQG---KLGVDLFRQLERNSEAPLD---- 507
I A +V M E T + + GC++H + K G + LE P++
Sbjct: 493 FIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAK--KLLEIEPTKPVNYSIL 550
Query: 508 DNIYAAALHACSTARMFE-EGRVCFN 532
N Y + H A + + E R C+N
Sbjct: 551 SNAYVSEGHWNQAALLRKRERRNCYN 576
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 85/176 (48%), Gaps = 7/176 (3%)
Query: 318 GSLKHGREI---HGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWT 374
SL H ++ HG++V+ G+ + L N LL+ Y DA +F++MP + +V+W
Sbjct: 47 ASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWN 106
Query: 375 SMIRGYVKKGGFNNEV----FRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHG 430
+I G +++ G N F ++ + VS ++ C + K G ++H
Sbjct: 107 ILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHC 166
Query: 431 YLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHG 486
+++ G+E S +++ Y K G I A VF + ++D + W+ ++ L+G
Sbjct: 167 LMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNG 222
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/456 (29%), Positives = 222/456 (48%), Gaps = 44/456 (9%)
Query: 267 VVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCG--MIGSLKHGR 324
VSWTS I +NG L+EA + F M L G V+P+ + +L CG GS G
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAG--VEPNHITFIALLSGCGDFTSGSEALGD 93
Query: 325 EIHGYLVRNGVECD-VLLSNTLLKMYADCGASRDARLVFE-------------------- 363
+HGY + G++ + V++ ++ MY+ G + ARLVF+
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 364 -----------QMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSI 412
+MP + ++SWT+MI G+VKKG + E FR+M G+KP V+I +
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKG-YQEEALLWFREMQISGVKPDYVAIIAA 212
Query: 413 LPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDT 472
L AC + + G +H Y+L + ++ VSN++ID+Y + G + A VF M ++
Sbjct: 213 LNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTV 272
Query: 473 ISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFN 532
+SW+ +I G + +G + FR+++ P D + AL ACS + EEG F
Sbjct: 273 VSWNSVIVGFAANGNAHESLVYFRKMQEKGFKP-DAVTFTGALTACSHVGLVEEGLRYFQ 331
Query: 533 HIR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHG-E 586
++ P I H V L +R G ++A+ ++ ++ + V+ LL C HG
Sbjct: 332 IMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNN 391
Query: 587 YALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTL 646
L +++++ L +L + NYV+L N +A GK + K+R ++ GLK + +
Sbjct: 392 IVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIE 451
Query: 647 YREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEG 682
+ +HVF GD +H I L+ ++R +G
Sbjct: 452 IDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQG 487
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 131/250 (52%), Gaps = 5/250 (2%)
Query: 240 NSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLS 299
N+++ Y+ G + +A +F+KMP +D++SWT+MI G V+ G EA+ FR M + G
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISG-- 201
Query: 300 VKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDAR 359
VKPD V + L C +G+L G +H Y++ + +V +SN+L+ +Y CG AR
Sbjct: 202 VKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFAR 261
Query: 360 LVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRI 419
VF M +TVVSW S+I G+ G +E FRKM +G KP AV+ + L AC +
Sbjct: 262 QVFYNMEKRTVVSWNSVIVGFAANGN-AHESLVYFRKMQEKGFKPDAVTFTGALTACSHV 320
Query: 420 ASHKHG-REIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK-DTISWSM 477
+ G R + I ++D+Y ++G + AL + M K + +
Sbjct: 321 GLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGS 380
Query: 478 MIFGCSLHGQ 487
++ CS HG
Sbjct: 381 LLAACSNHGN 390
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 135/358 (37%), Gaps = 55/358 (15%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
Q ++S T++W + I+ N A F+ M V
Sbjct: 26 QRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSG---CG 82
Query: 115 DFS-----LGKQLHTHAVKLALSSRAHTLI--ALIHLYAS-------------LDD---- 150
DF+ LG LH +A KL L R H ++ A+I +Y+ ++D
Sbjct: 83 DFTSGSEALGDLLHGYACKLGLD-RNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSV 141
Query: 151 --------------IAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXX 196
+ A +FDK WT + +V +G AL F M
Sbjct: 142 TWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISG 201
Query: 197 XXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDAR 256
+G+L G VH + + V SNSL+ +Y CG + AR
Sbjct: 202 VKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFAR 261
Query: 257 LVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGM 316
VF M + VVSW S+I G NG E++ FR+M +G KPD V + L C
Sbjct: 262 QVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGF--KPDAVTFTGALTACSH 319
Query: 317 IGSLKHGREIHGYLVRNGVECDVLLS------NTLLKMYADCGASRDARLVFEQMPSK 368
+G ++ G + +CD +S L+ +Y+ G DA + + MP K
Sbjct: 320 VGLVEEGLRYFQIM-----KCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 214/445 (48%), Gaps = 16/445 (3%)
Query: 119 GKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVL 178
GKQ+H H L S L+H+Y + + AQ +FD++ W L + V+
Sbjct: 130 GKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVI 189
Query: 179 EGMPR--SALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEV 236
G R L F M +LRQG H +A+K GL V
Sbjct: 190 SGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSV 249
Query: 237 FASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLE 296
F SL+ MY CG + AR VF+++ +D+V W +MI G N EA+ LFR M E
Sbjct: 250 FLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISE 309
Query: 297 GLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLV--RNGVECDVLLSNTLLKMYADCGA 354
+ P+ V+++T+LPV G + +LK G+E+H +++ +N VE + + L+ +Y CG
Sbjct: 310 E-KIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVE-QPFVHSGLIDLYCKCGD 367
Query: 355 SRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILP 414
R VF + +SWT+++ GY G F ++ R M EG +P V+I+++LP
Sbjct: 368 MASGRRVFYGSKQRNAISWTALMSGYAANGRF-DQALRSIVWMQQEGFRPDVVTIATVLP 426
Query: 415 ACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTIS 474
C + + K G+EIH Y L+N ++++ +++ MY K G + +F + +++ +
Sbjct: 427 VCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKA 486
Query: 475 WSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHI 534
W+ MI + + G+++FR + + P D L CS + + G+ HI
Sbjct: 487 WTAMIDCYVENCDLRAGIEVFRLMLLSKHRP-DSVTMGRVLTVCSDLKALKLGKELHGHI 545
Query: 535 RG------PMIAHCAQKVSLLARCG 553
P ++ A+ + + +CG
Sbjct: 546 LKKEFESIPFVS--ARIIKMYGKCG 568
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 136/518 (26%), Positives = 233/518 (44%), Gaps = 21/518 (4%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHL--SNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASR 111
+VFD+S + +WN L+ + + +STFT+M V +
Sbjct: 166 QKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFA 225
Query: 112 LAADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTF 171
A+ G + H A+K L + +L+ +Y + +A+ +FD+ W
Sbjct: 226 GASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGA 285
Query: 172 LAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXM-MGSLRQGRDVHLIAVKL 230
+ AL LF M+ + +L+ G++VH +K
Sbjct: 286 MIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKS 345
Query: 231 -GLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMEL 289
+ F + L+ +Y CG M R VF ++ +SWT+++ G NG +A+
Sbjct: 346 KNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRS 405
Query: 290 FRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMY 349
M EG +PD+V ++TVLPVC + ++K G+EIH Y ++N +V L +L+ MY
Sbjct: 406 IVWMQQEGF--RPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMY 463
Query: 350 ADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNN--EVFRLFRKMNSEGLKPTAV 407
+ CG +F+++ + V +WT+MI YV+ EVFRL M +P +V
Sbjct: 464 SKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRL---MLLSKHRPDSV 520
Query: 408 SISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEM 467
++ +L C + + K G+E+HG++L+ E VS +I MY K G + A F +
Sbjct: 521 TMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAV 580
Query: 468 NEKDTISWSMMI--FGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFE 525
K +++W+ +I +GC + + ++ F Q+ P + + A L CS A +
Sbjct: 581 AVKGSLTWTAIIEAYGC--NELFRDAINCFEQMVSRGFTP-NTFTFTAVLSICSQAGFVD 637
Query: 526 EGRVCFN-----HIRGPMIAHCAQKVSLLARCGLFDEA 558
E FN + P H + + LL RCG +EA
Sbjct: 638 EAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 184/389 (47%), Gaps = 18/389 (4%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIR 275
SL G+ VH+ GLE F L+ MY CGS++DA+ VF++ +V SW +++R
Sbjct: 126 SLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLR 185
Query: 276 GCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGV 335
G V +G+ L + L V ++ +S V +L+ G + H ++NG+
Sbjct: 186 GTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGL 245
Query: 336 ECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFR 395
V L +L+ MY CG AR VF+++ + +V W +MI G + E LFR
Sbjct: 246 FNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAG-LAHNKRQWEALGLFR 304
Query: 396 KMNS-EGLKPTAVSISSILPACGRIASHKHGREIHGYLL--RNGVEFDINVSNAVIDMYV 452
M S E + P +V +++ILP G + + K G+E+H ++L +N VE V + +ID+Y
Sbjct: 305 TMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPF-VHSGLIDLYC 363
Query: 453 KSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYA 512
K G +A VF +++ ISW+ ++ G + +G+ + +++ P D A
Sbjct: 364 KCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRP-DVVTIA 422
Query: 513 AALHACSTARMFEEGRVCFNHIRGPMIAHC-AQKVSLLARCGLFDEAMVFIREQKIEQHP 571
L C+ R ++G+ HC A K L L MV + + ++P
Sbjct: 423 TVLPVCAELRAIKQGKEI----------HCYALKNLFLPNVSLVTSLMVMYSKCGVPEYP 472
Query: 572 EVLRKLLEGCRIHGEYALGKQVIEQLCEL 600
L LE + A+ +E C+L
Sbjct: 473 IRLFDRLEQRNVKAWTAMIDCYVEN-CDL 500
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 152/345 (44%), Gaps = 31/345 (8%)
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGA 354
LE + + S +L C SL HG+++H ++ NG+E + L L+ MY CG+
Sbjct: 102 LEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGS 161
Query: 355 SRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFN-NEVFRLFRKMNSEGLKPTAVSISSIL 413
+DA+ VF++ S V SW +++RG V G +V F +M G+ S+S++
Sbjct: 162 VKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVF 221
Query: 414 PACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTI 473
+ ++ + G + H ++NG+ + + +++DMY K G + A VF E+ E+D +
Sbjct: 222 KSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIV 281
Query: 474 SWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNH 533
W MI G + + + + LFR + + + I L + + G+ H
Sbjct: 282 VWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAH 341
Query: 534 IRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQV 593
+ ++ + + P V L++ G+ A G++V
Sbjct: 342 V---------------------------LKSKNYVEQPFVHSGLIDLYCKCGDMASGRRV 374
Query: 594 IEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKP 638
+ NA ++ L++ +A G+ D + +++ G +P
Sbjct: 375 ---FYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRP 416
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 156/659 (23%), Positives = 278/659 (42%), Gaps = 114/659 (17%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
+FD+ P+ + +WNT+I ++++ ++ F M
Sbjct: 82 RNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPER------------------- 122
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
++ ++ +A +++VA+ LF+ L
Sbjct: 123 --------------------DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLL 162
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
Y+L G AL LF + + +L+ G+ +H + G+E
Sbjct: 163 HGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVE 219
Query: 234 GEVFASNSLLKMYVDCGSMR-------------------------------DARLVFEKM 262
+ ++SL+ +Y CG +R ++R +F++
Sbjct: 220 CDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRK 279
Query: 263 PCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKH 322
+ V+ W SMI G + N EA+ LF M E + D ++ V+ C +G L+
Sbjct: 280 SNRCVILWNSMISGYIANNMKMEALVLFNEMRNE---TREDSRTLAAVINACIGLGFLET 336
Query: 323 GREIHGYLVRNGVECDVLLSNTLLKMYADCGAS--------------------------- 355
G+++H + + G+ D+++++TLL MY+ CG+
Sbjct: 337 GKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFS 396
Query: 356 ----RDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISS 411
DA+ VFE++ +K+++SW SM G+ + G E F +M+ L VS+SS
Sbjct: 397 CGRIDDAKRVFERIENKSLISWNSMTNGF-SQNGCTVETLEYFHQMHKLDLPTDEVSLSS 455
Query: 412 ILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKD 471
++ AC I+S + G ++ G++ D VS+++ID+Y K G + VF M + D
Sbjct: 456 VISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSD 515
Query: 472 TISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCF 531
+ W+ MI G + +GQG +DLF+++ P + L AC+ + EEGR F
Sbjct: 516 EVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQIT-FMVVLTACNYCGLVEEGRKLF 574
Query: 532 -----NHIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGE 586
+H P H + V LLAR G +EA+ + E + + +L GC +G
Sbjct: 575 ESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGY 634
Query: 587 YALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWT 645
A+GK+ E++ ELEP N+ YV L A G + +R+ +RE + +WT
Sbjct: 635 KAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWT 693
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 127/262 (48%), Gaps = 46/262 (17%)
Query: 221 RDVHLIAVKLG-LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQ 279
R + + +K G L V +N LL+MY G M AR +F++MP ++ SW +MI G +
Sbjct: 46 RQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMN 105
Query: 280 NGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDV 339
+GE ++ F M P+ R+G +V
Sbjct: 106 SGEKGTSLRFFDMM--------PE----------------------------RDGYSWNV 129
Query: 340 LLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNS 399
++S +A G AR +F MP K VV+ S++ GY+ G + E RLF+++N
Sbjct: 130 VVSG-----FAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNG-YAEEALRLFKELN- 182
Query: 400 EGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIAC 459
A++++++L AC + + K G++IH +L GVE D ++++++++Y K G +
Sbjct: 183 --FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRM 240
Query: 460 ALNVFGEMNEKDTISWSMMIFG 481
A + ++ E D S S +I G
Sbjct: 241 ASYMLEQIREPDDHSLSALISG 262
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 194 bits (492), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 152/515 (29%), Positives = 232/515 (45%), Gaps = 42/515 (8%)
Query: 116 FSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKL 175
F G+ LH H V ++ L+ Y + A+ +FD+ +
Sbjct: 32 FCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGA 91
Query: 176 YVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGE 235
G + +L+ F M + G+ +H + +K E +
Sbjct: 92 CARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESD 151
Query: 236 VFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNL 295
F +SL+ MY G + +AR VF + +D+V + +MI G N + EA+ L + M L
Sbjct: 152 AFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKL 211
Query: 296 EGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGAS 355
L +KPD++ + +I H +RN + +L L Y
Sbjct: 212 --LGIKPDVITWN------ALISGFSH--------MRNEEKVSEILELMCLDGY------ 249
Query: 356 RDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNE-VFRLFRKMNSEGLKPTAVSISSILP 414
VVSWTS+I G V F NE F F++M + GL P + +I ++LP
Sbjct: 250 -----------KPDVVSWTSIISGLVHN--FQNEKAFDAFKQMLTHGLYPNSATIITLLP 296
Query: 415 ACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTIS 474
AC +A KHG+EIHGY + G+E V +A++DMY K G I+ A+ +F + +K T++
Sbjct: 297 ACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVT 356
Query: 475 WSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCF--- 531
++ MIF + HG V+LF Q+E E LD + A L ACS A + + G+ F
Sbjct: 357 FNSMIFCYANHGLADKAVELFDQMEATGE-KLDHLTFTAILTACSHAGLTDLGQNLFLLM 415
Query: 532 -NHIR-GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYAL 589
N R P + H A V LL R G EA I+ ++E V LL CR HG L
Sbjct: 416 QNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMEL 475
Query: 590 GKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMV 624
+ + L ELEP N+ N +LL + +A G + V
Sbjct: 476 ARIAAKHLAELEPENSGNGLLLTSLYANAGSWESV 510
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 197/447 (44%), Gaps = 52/447 (11%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VFD+ P+ D +I N ++ ++ F +M + + ASR
Sbjct: 72 KVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLL 131
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
D GK +H +K + S A + +LI +Y+ ++ A+ +F SD
Sbjct: 132 DREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVF-------SD------- 177
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
+ L +F+ M+ +L +D+ L LG++
Sbjct: 178 ------LGEQDLVVFNAMISGYANNSQADE-----------ALNLVKDMKL----LGIKP 216
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFE--KMPC-----KDVVSWTSMIRGCVQNGELSEAM 287
+V N+L+ + MR+ V E ++ C DVVSWTS+I G V N + +A
Sbjct: 217 DVITWNALISGF---SHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAF 273
Query: 288 ELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLK 347
+ F++M GL P+ + T+LP C + +KHG+EIHGY V G+E + + LL
Sbjct: 274 DAFKQMLTHGLY--PNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLD 331
Query: 348 MYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAV 407
MY CG +A ++F + P KT V++ SMI Y G ++ LF +M + G K +
Sbjct: 332 MYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANH-GLADKAVELFDQMEATGEKLDHL 390
Query: 408 SISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSN--AVIDMYVKSGAIACALNVFG 465
+ ++IL AC G+ + L++N + + ++D+ ++G + A +
Sbjct: 391 TFTAILTACSHAGLTDLGQNLF-LLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIK 449
Query: 466 EMN-EKDTISWSMMIFGCSLHGQGKLG 491
M E D W ++ C HG +L
Sbjct: 450 AMRMEPDLFVWGALLAACRNHGNMELA 476
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 192 bits (487), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 186/380 (48%), Gaps = 5/380 (1%)
Query: 303 DLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVF 362
D +S+ + CG+ + G H ++ G DV L ++L+ +Y D G +A VF
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 363 EQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASH 422
E+MP + VVSWT+MI G+ ++ + +L+ KM P + +++L AC +
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVD-ICLKLYSKMRKSTSDPNDYTFTALLSACTGSGAL 237
Query: 423 KHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGC 482
GR +H L G++ +++SN++I MY K G + A +F + + KD +SW+ MI G
Sbjct: 238 GQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGY 297
Query: 483 SLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFN----HIRGPM 538
+ HG ++LF + S D Y L +C A + +EGR FN H P
Sbjct: 298 AQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPE 357
Query: 539 IAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLC 598
+ H + V LL R GL EA+ I ++ + + LL CR+HG+ G + E+
Sbjct: 358 LNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERL 417
Query: 599 ELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGD 658
LEP A +V L N +A G +R+ ++++GLK C+W V +F D
Sbjct: 418 MLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAED 477
Query: 659 VSHPRKKEICSALQGFMEEM 678
S+ R EI L ++ M
Sbjct: 478 GSNCRMLEIVHVLHCLIDHM 497
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 148/278 (53%), Gaps = 5/278 (1%)
Query: 217 LRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRG 276
R G H +A+K G +V+ +SL+ +Y D G + +A VFE+MP ++VVSWT+MI G
Sbjct: 136 FRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISG 195
Query: 277 CVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVE 336
Q + ++L+ +M + P+ + +L C G+L GR +H + G++
Sbjct: 196 FAQEWRVDICLKLYSKMRKS--TSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLK 253
Query: 337 CDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFR- 395
+ +SN+L+ MY CG +DA +F+Q +K VVSW SMI GY + G + LF
Sbjct: 254 SYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQH-GLAMQAIELFEL 312
Query: 396 KMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSG 455
M G KP A++ +L +C K GR+ + +G++ ++N + ++D+ + G
Sbjct: 313 MMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFG 372
Query: 456 AIACALNVFGEMNEK-DTISWSMMIFGCSLHGQGKLGV 492
+ AL + M K +++ W ++F C +HG G+
Sbjct: 373 LLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGI 410
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 123/267 (46%), Gaps = 2/267 (0%)
Query: 112 LAADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTF 171
L DF G H A+K S + +L+ LY ++ A +F++ WT
Sbjct: 132 LNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTA 191
Query: 172 LAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLG 231
+ + E L+L+ +M G+L QGR VH + +G
Sbjct: 192 MISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMG 251
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFR 291
L+ + SNSL+ MY CG ++DA +F++ KDVVSW SMI G Q+G +A+ELF
Sbjct: 252 LKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFE 311
Query: 292 RMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYAD 351
M + KPD + VL C G +K GR+ + +G++ ++ + L+ +
Sbjct: 312 LM-MPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGR 370
Query: 352 CGASRDARLVFEQMPSK-TVVSWTSMI 377
G ++A + E MP K V W S++
Sbjct: 371 FGLLQEALELIENMPMKPNSVIWGSLL 397
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 113/274 (41%), Gaps = 8/274 (2%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
++VF++ PE + ++W +I + + +++M + A +
Sbjct: 175 YKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGS 234
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
G+ +H + + L S H +LI +Y D+ A +FD+ + W +
Sbjct: 235 GALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMI 294
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXX-XMMGSLRQGRDVHLIAVKLGL 232
Y G+ A+ELF M+ G +++GR + + GL
Sbjct: 295 AGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGL 354
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCK-DVVSWTSMIRGCVQNGELSEAMELFR 291
+ E+ + L+ + G +++A + E MP K + V W S++ C +G++ +
Sbjct: 355 KPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGI---- 410
Query: 292 RMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGRE 325
R E L ++PD +T + + + S+ + +E
Sbjct: 411 RAAEERLMLEPDC--AATHVQLANLYASVGYWKE 442
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 141/510 (27%), Positives = 233/510 (45%), Gaps = 19/510 (3%)
Query: 121 QLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEG 180
++H + VK L + L+ ++S+ DI A ++F+ + + + + Y +
Sbjct: 46 RIHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISD 104
Query: 181 MPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASN 240
P A +F+++ + G +H IA++ G N
Sbjct: 105 EPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRN 164
Query: 241 SLLKMYVDCGSMRDARLVFEKMP-CKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLS 299
+L+ Y CG + DAR VF++MP D V++++++ G +Q + + A++LFR M
Sbjct: 165 ALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMR----- 219
Query: 300 VKPDLVM-VSTVLPVCGMI---GSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGAS 355
K ++V+ VST+L I G L H ++ G++ D+ L L+ MY G
Sbjct: 220 -KSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGI 278
Query: 356 RDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPA 415
AR +F+ K VV+W MI Y K G V+ L R+M E +KP + + +L +
Sbjct: 279 SSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVW-LLRQMKYEKMKPNSSTFVGLLSS 337
Query: 416 CGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISW 475
C + GR + L + D + A++DMY K G + A+ +F M +KD SW
Sbjct: 338 CAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSW 397
Query: 476 SMMIFGCSLHGQGKLGVDLFRQL-ERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHI 534
+ MI G HG + V LF ++ E N + ++ + L+ACS + EG CF +
Sbjct: 398 TAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRM 457
Query: 535 R-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYAL 589
P + H V LL R G +EA IR I R LL CR++G L
Sbjct: 458 VEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADL 517
Query: 590 GKQVIEQLCELEPLNAENYVLLLNWHAGKG 619
G+ V+ +L E+ + + +LL HA G
Sbjct: 518 GESVMMRLAEMGETHPADAILLAGTHAVAG 547
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 112/285 (39%), Gaps = 12/285 (4%)
Query: 54 HQVFDKSPE-WDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRL 112
+VFD+ P+ D + ++TL++ +L + LA+ F M + V A
Sbjct: 180 RKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISD 239
Query: 113 AADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFL 172
D S + H +K+ L H + ALI +Y I+ A+ +FD W +
Sbjct: 240 LGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCM 299
Query: 173 AKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL 232
Y G+ + L +M + GR V + + +
Sbjct: 300 IDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERI 359
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
+ +L+ MY G + A +F +M KDV SWT+MI G +G EA+ LF +
Sbjct: 360 ALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNK 419
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVEC 337
M E V+P+ + VL C HG LV G+ C
Sbjct: 420 MEEENCKVRPNEITFLVVLNACS-----------HGGLVMEGIRC 453
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/537 (25%), Positives = 242/537 (45%), Gaps = 46/537 (8%)
Query: 118 LGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYV 177
LGKQ+H A++L H +L+ +YA D+ A+ +F + W + +
Sbjct: 267 LGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFG 326
Query: 178 LEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVF 237
E ++E RM S Q +V I+V G F
Sbjct: 327 QEYRSDKSVEFLTRM---------------------RDSGFQPNEVTCISVL----GACF 361
Query: 238 ASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEG 297
S G + R +F +P V +W +M+ G EA+ FR+M +
Sbjct: 362 RS----------GDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQN 411
Query: 298 LSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRD 357
L KPD +S +L C + L+ G++IHG ++R + + + + L+ +Y++C
Sbjct: 412 L--KPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEI 469
Query: 358 ARLVFEQMPSK-TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEG-LKPTAVSISSILPA 415
+ +F+ ++ + W SMI G+ + + + LFR+M+ L P S +++L +
Sbjct: 470 SECIFDDCINELDIACWNSMISGF-RHNMLDTKALILFRRMHQTAVLCPNETSFATVLSS 528
Query: 416 CGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISW 475
C R+ S HGR+ HG ++++G D V A+ DMY K G I A F + K+T+ W
Sbjct: 529 CSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIW 588
Query: 476 SMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR 535
+ MI G +G+G V L+R++ + E P D + + L ACS + + E G + ++
Sbjct: 589 NEMIHGYGHNGRGDEAVGLYRKMISSGEKP-DGITFVSVLTACSHSGLVETGLEILSSMQ 647
Query: 536 -----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALG 590
P + H V L R G ++A + + LL CR+HG+ +L
Sbjct: 648 RIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLA 707
Query: 591 KQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLY 647
++V E+L L+P ++ YVLL N ++ + D ++ + + + +WT Y
Sbjct: 708 RRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTY 764
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 200/419 (47%), Gaps = 48/419 (11%)
Query: 219 QGRDVHLIAVKLGLEGEVFASNSLLKMYVDCG------------SMRD------------ 254
G+ +H V++G++ + + N LL +Y++CG S+RD
Sbjct: 24 SGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRC 83
Query: 255 -------ARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMV 307
A VF+ MP +DVVSW +MI V+ G +A+ +++RM +G P +
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGF--LPSRFTL 141
Query: 308 STVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARL-VFEQMP 366
++VL C + G HG V+ G++ ++ + N LL MYA CG D + VFE +
Sbjct: 142 ASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLS 201
Query: 367 SKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILP---------ACG 417
VS+T++I G ++ E ++FR M +G++ +V +S+IL +
Sbjct: 202 QPNEVSYTAVIGGLARENKVL-EAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLS 260
Query: 418 RIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSM 477
I ++ G++IH LR G D++++N+++++Y K+ + A +F EM E + +SW++
Sbjct: 261 EIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNI 320
Query: 478 MIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRGP 537
MI G + V+ ++ R+S ++ + L AC + E GR F+ I P
Sbjct: 321 MIVGFGQEYRSDKSVEFLTRM-RDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQP 379
Query: 538 MIAHCAQKVSLLARCGLFDEAMVFIRE---QKIEQHPEVLRKLLEGCRIHGEYALGKQV 593
++ +S + ++EA+ R+ Q ++ L +L C GKQ+
Sbjct: 380 SVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQI 438
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/476 (23%), Positives = 194/476 (40%), Gaps = 49/476 (10%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VFD PE D ++WN +I + A+ + +M+ A
Sbjct: 93 EVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVL 152
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIA-VAQTLFDKTAPFGSDCWTFLA 173
D G + H AVK L AL+ +YA I +F+ + +T +
Sbjct: 153 DGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVI 212
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXM---MGSLRQ------GRDVH 224
E A+++F M SL + G+ +H
Sbjct: 213 GGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIH 272
Query: 225 LIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELS 284
+A++LG G++ +NSLL++Y M A L+F +MP +VVSW MI G Q
Sbjct: 273 CLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSD 332
Query: 285 EAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNT 344
+++E RM G +P+ V +VL C G ++ GR I
Sbjct: 333 KSVEFLTRMRDSGF--QPNEVTCISVLGACFRSGDVETGRRI------------------ 372
Query: 345 LLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKP 404
F +P +V +W +M+ GY + E FR+M + LKP
Sbjct: 373 -----------------FSSIPQPSVSAWNAMLSGYSNYEHY-EEAISNFRQMQFQNLKP 414
Query: 405 TAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVF 464
++S IL +C R+ + G++IHG ++R + + ++ + +I +Y + + + +F
Sbjct: 415 DKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIF 474
Query: 465 GE-MNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACS 519
+ +NE D W+ MI G + + LFR++ + + ++ +A L +CS
Sbjct: 475 DDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCS 530
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 184/451 (40%), Gaps = 80/451 (17%)
Query: 119 GKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFD------------------K 160
GK +H V++ + S + L+ LY D A+ +FD K
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 161 TAPFGSDC-------------WTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXX 207
G C W + + V +G AL ++ RMV
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 208 XXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARL-VFEKMPCKD 266
+ G H +AVK GL+ +F N+LL MY CG + D + VFE + +
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 267 VVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPV------CGMIGSL 320
VS+T++I G + ++ EA+++FR M +G+ V D V +S +L + C + +
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQV--DSVCLSNILSISAPREGCDSLSEI 262
Query: 321 ---KHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMI 377
+ G++IH +R G D+ L+N+LL++YA A L+F +MP VVSW MI
Sbjct: 263 YGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMI 322
Query: 378 RGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGV 437
G+ ++ + V +M G +P V+ S+L AC R + GR I
Sbjct: 323 VGFGQEYRSDKSV-EFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRI--------- 372
Query: 438 EFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQ 497
F + + +W+ M+ G S + + + FRQ
Sbjct: 373 --------------------------FSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQ 406
Query: 498 LERNSEAPLDDNIYAAALHACSTARMFEEGR 528
++ + P D + L +C+ R E G+
Sbjct: 407 MQFQNLKP-DKTTLSVILSSCARLRFLEGGK 436
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 5/318 (1%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
++F P+ AWN ++ + + H+ AIS F QM + +
Sbjct: 371 RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLR 430
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDK-TAPFGSDCWTFLA 173
GKQ+H ++ +S +H + LI +Y+ + + +++ +FD CW +
Sbjct: 431 FLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMI 490
Query: 174 KLYVLEGMPRSALELFHRM-VXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL 232
+ + AL LF RM + SL GR H + VK G
Sbjct: 491 SGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGY 550
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
+ F +L MY CG + AR F+ + K+ V W MI G NG EA+ L+R+
Sbjct: 551 VSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRK 610
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVR-NGVECDVLLSNTLLKMYAD 351
M G KPD + +VL C G ++ G EI + R +G+E ++ ++
Sbjct: 611 MISSG--EKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGR 668
Query: 352 CGASRDARLVFEQMPSKT 369
G DA + E P K+
Sbjct: 669 AGRLEDAEKLAEATPYKS 686
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 190 bits (482), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 143/567 (25%), Positives = 256/567 (45%), Gaps = 48/567 (8%)
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
+F G+QLH H + L + + L+ Y++ + + AQT+ + + W L
Sbjct: 98 EFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIG 157
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
Y+ + ++ ++ RM+ + GR VH
Sbjct: 158 SYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRC 217
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
++ N+L+ MY G + AR +F++M +D VSW ++I +L EA +L RM
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 295 LEGLSVKPDLVMVSTV-----------------------------------LPVCGMIGS 319
L G V+ +V +T+ L C IG+
Sbjct: 278 LSG--VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGA 335
Query: 320 LKHGREIHGYLVRN-GVECDV-LLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMI 377
LK G+ H ++R+ D+ + N+L+ MY+ C R A +VF+Q+ + ++ +W S+I
Sbjct: 336 LKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSII 395
Query: 378 RGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGV 437
G+ F L ++M G P ++++SILP R+ + +HG+E H Y+LR
Sbjct: 396 SGFAYNERSEETSF-LLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQS 454
Query: 438 EFD-INVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFR 496
D + + N+++DMY KSG I A VF M ++D ++++ +I G G+G++ + F+
Sbjct: 455 YKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFK 514
Query: 497 QLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFN---HIRGP--MIAHCAQKVSLLAR 551
++R+ P D A L ACS + + EG F H+ G + H + V L R
Sbjct: 515 DMDRSGIKP-DHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCR 573
Query: 552 CGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQ-LCELEPLNAENYVL 610
G D+A E + LL+ C IHG +G+ ++ L E +P + +Y+L
Sbjct: 574 AGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYML 633
Query: 611 LLNWHAGKGKLDMVDKIRETIRERGLK 637
L + +A G + ++ + + G++
Sbjct: 634 LADMYAVTGSWSKLVTVKTLLSDLGVQ 660
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 114/227 (50%), Gaps = 4/227 (1%)
Query: 274 IRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN 333
R C+ +G+L EA F + + S + L +++L C G+++H + + +
Sbjct: 53 FRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISS 112
Query: 334 GVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRL 393
G+E D +L L+ Y+ +A+ + E + W +I Y++ F V +
Sbjct: 113 GLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESV-SV 171
Query: 394 FRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVK 453
+++M S+G++ + S++ AC + +GR +HG + + ++ V NA+I MY +
Sbjct: 172 YKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKR 231
Query: 454 SGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLER 500
G + A +F M+E+D +SW+ +I C + KLG + F+ L+R
Sbjct: 232 FGKVDVARRLFDRMSERDAVSWNAII-NC-YTSEEKLG-EAFKLLDR 275
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 190 bits (482), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 143/567 (25%), Positives = 256/567 (45%), Gaps = 48/567 (8%)
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
+F G+QLH H + L + + L+ Y++ + + AQT+ + + W L
Sbjct: 98 EFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIG 157
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
Y+ + ++ ++ RM+ + GR VH
Sbjct: 158 SYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRC 217
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
++ N+L+ MY G + AR +F++M +D VSW ++I +L EA +L RM
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 295 LEGLSVKPDLVMVSTV-----------------------------------LPVCGMIGS 319
L G V+ +V +T+ L C IG+
Sbjct: 278 LSG--VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGA 335
Query: 320 LKHGREIHGYLVRN-GVECDV-LLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMI 377
LK G+ H ++R+ D+ + N+L+ MY+ C R A +VF+Q+ + ++ +W S+I
Sbjct: 336 LKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSII 395
Query: 378 RGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGV 437
G+ F L ++M G P ++++SILP R+ + +HG+E H Y+LR
Sbjct: 396 SGFAYNERSEETSF-LLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQS 454
Query: 438 EFD-INVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFR 496
D + + N+++DMY KSG I A VF M ++D ++++ +I G G+G++ + F+
Sbjct: 455 YKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFK 514
Query: 497 QLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFN---HIRGP--MIAHCAQKVSLLAR 551
++R+ P D A L ACS + + EG F H+ G + H + V L R
Sbjct: 515 DMDRSGIKP-DHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCR 573
Query: 552 CGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQ-LCELEPLNAENYVL 610
G D+A E + LL+ C IHG +G+ ++ L E +P + +Y+L
Sbjct: 574 AGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYML 633
Query: 611 LLNWHAGKGKLDMVDKIRETIRERGLK 637
L + +A G + ++ + + G++
Sbjct: 634 LADMYAVTGSWSKLVTVKTLLSDLGVQ 660
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 114/227 (50%), Gaps = 4/227 (1%)
Query: 274 IRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN 333
R C+ +G+L EA F + + S + L +++L C G+++H + + +
Sbjct: 53 FRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISS 112
Query: 334 GVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRL 393
G+E D +L L+ Y+ +A+ + E + W +I Y++ F V +
Sbjct: 113 GLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESV-SV 171
Query: 394 FRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVK 453
+++M S+G++ + S++ AC + +GR +HG + + ++ V NA+I MY +
Sbjct: 172 YKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKR 231
Query: 454 SGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLER 500
G + A +F M+E+D +SW+ +I C + KLG + F+ L+R
Sbjct: 232 FGKVDVARRLFDRMSERDAVSWNAII-NC-YTSEEKLG-EAFKLLDR 275
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 186 bits (471), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 131/522 (25%), Positives = 224/522 (42%), Gaps = 52/522 (9%)
Query: 120 KQLHTHAVKLAL---SSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLY 176
+Q H +K L + A L+A ++ A ++ ++ + + Y
Sbjct: 56 QQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAY 115
Query: 177 VLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEV 236
P AL +F M+ +GR +H + +K GL +V
Sbjct: 116 ANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDV 175
Query: 237 FASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLE 296
F N+L+ +Y G AR V ++MP +D VSW S++ ++ G + EA LF M
Sbjct: 176 FVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEME-- 233
Query: 297 GLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASR 356
E +V N ++ YA G +
Sbjct: 234 ---------------------------------------ERNVESWNFMISGYAAAGLVK 254
Query: 357 DARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKM-NSEGLKPTAVSISSILPA 415
+A+ VF+ MP + VVSW +M+ Y G + NEV +F KM + KP ++ S+L A
Sbjct: 255 EAKEVFDSMPVRDVVSWNAMVTAYAHVGCY-NEVLEVFNKMLDDSTEKPDGFTLVSVLSA 313
Query: 416 CGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISW 475
C + S G +H Y+ ++G+E + ++ A++DMY K G I AL VF +++D +W
Sbjct: 314 CASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTW 373
Query: 476 SMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR 535
+ +I S+HG GK +++F ++ P + + L AC+ M ++ R F +
Sbjct: 374 NSIISDLSVHGLGKDALEIFSEMVYEGFKP-NGITFIGVLSACNHVGMLDQARKLFEMMS 432
Query: 536 G-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALG 590
P I H V LL R G +EA + E ++ +L LL C+ G+
Sbjct: 433 SVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQA 492
Query: 591 KQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIR 632
+++ +L EL ++ Y + N +A G+ + V R +R
Sbjct: 493 ERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMR 534
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 110/266 (41%), Gaps = 15/266 (5%)
Query: 64 DTLAWNTLIHTHLSNNHFPLAISTFTQM-LRHAVXXXXXXXXXXXXASRLAADFSLGKQL 122
D NTL++ + + +F +A +M +R AV S L+A G
Sbjct: 174 DVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWN----------SLLSAYLEKGLVD 223
Query: 123 HTHAVKLALSSR-AHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGM 181
A+ + R + +I YA+ + A+ +FD W + Y G
Sbjct: 224 EARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGC 283
Query: 182 PRSALELFHRMVXXXXXXXXXXXXXXXXXX-XMMGSLRQGRDVHLIAVKLGLEGEVFASN 240
LE+F++M+ +GSL QG VH+ K G+E E F +
Sbjct: 284 YNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLAT 343
Query: 241 SLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSV 300
+L+ MY CG + A VF +DV +W S+I +G +A+E+F M EG
Sbjct: 344 ALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGF-- 401
Query: 301 KPDLVMVSTVLPVCGMIGSLKHGREI 326
KP+ + VL C +G L R++
Sbjct: 402 KPNGITFIGVLSACNHVGMLDQARKL 427
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 185 bits (470), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/473 (27%), Positives = 221/473 (46%), Gaps = 51/473 (10%)
Query: 218 RQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGC 277
+ G+ +H +K G + ++ S LL +++ CG + AR VF+++P + ++ MI G
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 278 VQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSL-----KHGREIHGYLVR 332
+++G + E + L +RM+ G K D +S VL GS R +H +++
Sbjct: 111 LKHGLVKELLLLVQRMSYSG--EKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIK 168
Query: 333 NGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNN--EV 390
VE D +L L+ Y G AR VFE M + VV TSMI GY+ +G + E+
Sbjct: 169 CDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEI 228
Query: 391 FR-----------------------------LFRKMNSEGLKPTAVSISSILPACGRIAS 421
F ++ M G P + +S++ AC + S
Sbjct: 229 FNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTS 288
Query: 422 HKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFG 481
H+ G+++H ++++GV I + ++++DMY K G I A VF +M EK+ SW+ MI G
Sbjct: 289 HEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDG 348
Query: 482 CSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR-----G 536
+G + ++LF +++ P + + AL ACS + + ++G F ++
Sbjct: 349 YGKNGNPEEALELFTRMKEFRIEP-NYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMK 407
Query: 537 PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQ 596
P + H A V L+ R G ++A F R ++ LL C +HG L +
Sbjct: 408 PKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASE 467
Query: 597 LCELEPLNAEN----YVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWT 645
L + LNA+ Y+ L N +A K D V KIRE ++ R + +WT
Sbjct: 468 LFK---LNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWT 517
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 178/410 (43%), Gaps = 38/410 (9%)
Query: 119 GKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVL 178
GK++H +K + I L+ L+ ++ A+ +FD+ + ++ Y+
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 179 EGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSL-----RQGRDVHLIAVKLGLE 233
G+ + L L RM GS R VH +K +E
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
+ +L+ YV G + AR VFE M ++VV TSMI G + G + +A E+F
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 294 N----------LEGLS--------------------VKPDLVMVSTVLPVCGMIGSLKHG 323
+EG S P++ ++V+ C ++ S + G
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 324 REIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKK 383
+++H ++++GV + + ++LL MYA CG DAR VF+QM K V SWTSMI GY K
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKN 352
Query: 384 GGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRN-GVEFDIN 442
G E LF +M ++P V+ L AC G EI + R+ ++ +
Sbjct: 353 GN-PEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKME 411
Query: 443 VSNAVIDMYVKSGAIACALNVFGEMNEK-DTISWSMMIFGCSLHGQGKLG 491
++D+ ++G + A M E+ D+ W+ ++ C+LHG +L
Sbjct: 412 HYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELA 461
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 225/470 (47%), Gaps = 21/470 (4%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRD----ARLVFEKMPCKDVVSWT 271
+++Q + H + + GL +A + LL ++ ++ A +F+ + + +
Sbjct: 23 TVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYD 82
Query: 272 SMIRGCVQNGELSEAMELFRRM-NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYL 330
+MIR C ++ + + F M E + P + ++ C G++IH ++
Sbjct: 83 TMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWV 142
Query: 331 VRNGV-ECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNE 389
V+NGV D + +L++Y + DAR VF+++P VV W ++ GYV+ G +E
Sbjct: 143 VKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVR-CGLGSE 201
Query: 390 VFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNG-VEFDINVSNAVI 448
+FR+M +GL+P S+++ L AC ++ + G+ IH ++ + +E D+ V A++
Sbjct: 202 GLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALV 261
Query: 449 DMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDD 508
DMY K G I A+ VF ++ ++ SW+ +I G + +G K + +LER D
Sbjct: 262 DMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDS 321
Query: 509 NIYAAALHACSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIR 563
+ L AC+ EEGR ++ P H + V L+ R G D+A+ I
Sbjct: 322 VVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIE 381
Query: 564 EQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAEN----YVLLLNWHAGKG 619
+ ++ V LL GCR H LG+ ++ L +LE N E V L N +
Sbjct: 382 KMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQ 441
Query: 620 KLDMVDKIRETIRERGLKPKKACTWTLYREKVHV--FGTGDVSHPRKKEI 667
+ K+R I +RG+ +K W++ +V F +GDVSHP +I
Sbjct: 442 RNPEASKVRGMIEQRGV--RKTPGWSVLEVDGNVTKFVSGDVSHPNLLQI 489
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 142/331 (42%), Gaps = 8/331 (2%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHA---VXXXXXXXXXXXXASRL 112
+FD ++ ++T+I ++ L + F M++ + A
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLK 128
Query: 113 AADFSLGKQLHTHAVKLALS-SRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTF 171
A FS+GKQ+H VK + S +H ++ +Y + A+ +FD+ W
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDV 188
Query: 172 LAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVH-LIAVKL 230
L YV G+ LE+F M+ +G+L QG+ +H + K
Sbjct: 189 LMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKS 248
Query: 231 GLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELF 290
+E +VF +L+ MY CG + A VF+K+ ++V SW ++I G G +AM
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCL 308
Query: 291 RRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGRE-IHGYLVRNGVECDVLLSNTLLKMY 349
R+ E +KPD V++ VL C G L+ GR + R + + ++ +
Sbjct: 309 ERLERED-GIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLM 367
Query: 350 ADCGASRDARLVFEQMPSKTVVS-WTSMIRG 379
G DA + E+MP K + S W +++ G
Sbjct: 368 CRAGRLDDALNLIEKMPMKPLASVWGALLNG 398
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 219/438 (50%), Gaps = 22/438 (5%)
Query: 215 GSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMI 274
G +R G VH + +++G + +V S + Y C + AR VF +MP ++ VSWT+++
Sbjct: 124 GQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALV 183
Query: 275 RGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMI--GSLKHGREIHGYLVR 332
V++GEL EA +F M P+ + S V G++ G L + +++ + +
Sbjct: 184 VAYVKSGELEEAKSMFDLM--------PERNLGSWNALVDGLVKSGDLVNAKKLFDEMPK 235
Query: 333 NGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFR 392
D++ +++ YA G AR +FE+ V +W+++I GY + G NE F+
Sbjct: 236 R----DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQ-PNEAFK 290
Query: 393 LFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDIN-VSNAVIDMY 451
+F +M ++ +KP + ++ AC ++ + ++ YL + +F + V A+IDM
Sbjct: 291 VFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMN 350
Query: 452 VKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIY 511
K G + A +F EM ++D +S+ M+ G ++HG G + LF ++ P D+ +
Sbjct: 351 AKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVP-DEVAF 409
Query: 512 AAALHACSTARMFEEGRVCFNHIRG--PMIA---HCAQKVSLLARCGLFDEAMVFIREQK 566
L C +R+ EEG F +R ++A H + V+LL+R G EA I+
Sbjct: 410 TVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMP 469
Query: 567 IEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDK 626
E H LL GC +HG + + V L ELEP +A +YVLL N +A + V
Sbjct: 470 FEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAH 529
Query: 627 IRETIRERGLKPKKACTW 644
+R+ + E G+ +W
Sbjct: 530 LRDKMNENGITKICGRSW 547
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 143/333 (42%), Gaps = 17/333 (5%)
Query: 258 VFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMI 317
VFE++P W +I+G E + + RM GL+ +PD V+ VC
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLA-RPDEYTFPLVMKVCSNN 123
Query: 318 GSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMI 377
G ++ G +HG ++R G + DV++ + + Y C AR VF +MP + VSWT+++
Sbjct: 124 GQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALV 183
Query: 378 RGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGV 437
YVK G E +F M L + ++ + + + K L
Sbjct: 184 VAYVKSGEL-EEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKK--------LFDEMP 234
Query: 438 EFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQ 497
+ DI ++ID Y K G + A ++F E D +WS +I G + +GQ +F +
Sbjct: 235 KRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSE 294
Query: 498 LERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRGPMIAHCAQKV-----SLLARC 552
+ + P D+ I + ACS FE +++ M + V + A+C
Sbjct: 295 MCAKNVKP-DEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKC 353
Query: 553 GLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHG 585
G D A E ++ ++EG IHG
Sbjct: 354 GHMDRAAKLFEEMP-QRDLVSYCSMMEGMAIHG 385
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 154/367 (41%), Gaps = 35/367 (9%)
Query: 302 PDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDV-LLSNTLLKMYADCGASRDARL 360
P L+ + T+ +C S H +IH ++R G+E D L+S + + + +
Sbjct: 8 PSLLSLETLFKLCK---SEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSS 64
Query: 361 VFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIA 420
VFE++PS W +I+GY K F V L R M + +P + ++ C
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 421 SHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIF 480
+ G +HG +LR G + D+ V + +D Y K + A VFGEM E++ +SW+ ++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 481 GCSLHGQGKLGVDLFRQL-ERN------------------------SEAPLDDNI-YAAA 514
G+ + +F + ERN E P D I Y +
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSM 244
Query: 515 LHACSTARMFEEGRVCFNHIRGPMIAHCAQKVSLLARCGLFDEAMVFIRE---QKIEQHP 571
+ + R F RG + + + A+ G +EA E + ++
Sbjct: 245 IDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDE 304
Query: 572 EVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVL--LLNWHAGKGKLDMVDKIRE 629
++ L+ C G + L ++V L + + +YV+ L++ +A G +D K+ E
Sbjct: 305 FIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFE 364
Query: 630 TIRERGL 636
+ +R L
Sbjct: 365 EMPQRDL 371
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 157/383 (40%), Gaps = 26/383 (6%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VF + PE + ++W L+ ++ + A S F M + +
Sbjct: 166 KVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVK----SG 221
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
D K+L K + S ++I YA D+ A+ LF++ W+ L
Sbjct: 222 DLVNAKKLFDEMPKRDIIS----YTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALIL 277
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDV-HLIAVKLGLE 233
Y G P A ++F M MG V + ++
Sbjct: 278 GYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKF 337
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
+ +L+ M CG M A +FE+MP +D+VS+ SM+ G +G SEA+ LF +M
Sbjct: 338 SSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKM 397
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLS----NTLLKMY 349
EG + PD V + +L VCG ++ G + L+R + +L S + ++ +
Sbjct: 398 VDEG--IVPDEVAFTVILKVCGQSRLVEEGLR-YFELMRK--KYSILASPDHYSCIVNLL 452
Query: 350 ADCGASRDARLVFEQMPSKTVVS-WTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTA-- 406
+ G ++A + + MP + S W S++ G G N E+ + + E L+P +
Sbjct: 453 SRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHG--NTEIAEVVARHLFE-LEPQSAG 509
Query: 407 --VSISSILPACGRIASHKHGRE 427
V +S+I A R H R+
Sbjct: 510 SYVLLSNIYAALDRWTDVAHLRD 532
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 153/625 (24%), Positives = 261/625 (41%), Gaps = 93/625 (14%)
Query: 131 LSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCW-------TFLAKLYVLEGMPR 183
L ++ A+I Y +++ A+ LF+ +C T L+ +G
Sbjct: 50 LERNVYSWNAVIAAYVKFNNVKEARELFE-----SDNCERDLITYNTLLSGFAKTDGCES 104
Query: 184 SALELF---HRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASN 240
A+E+F HR + ++ G +H + VK G +G FA +
Sbjct: 105 EAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVS 164
Query: 241 SLLKMYVDCGSMRD---------------------------------ARLVFEKMP-CKD 266
SL+ MY CG ++ A VF + P D
Sbjct: 165 SLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELND 224
Query: 267 VVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREI 326
+SW ++I G QNG EA+++ M GL K D VL V + SLK G+E+
Sbjct: 225 TISWNTLIAGYAQNGYEEEALKMAVSMEENGL--KWDEHSFGAVLNVLSSLKSLKIGKEV 282
Query: 327 HGYLVRNGVECDVLLSNTLLKMYADCGASR------------------------------ 356
H +++NG + +S+ ++ +Y CG +
Sbjct: 283 HARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKM 342
Query: 357 -DARLVFEQMPSKTVVSWTSMIRGYVKKGGFNN--EVFRLFRKMNSEGLKPTAVSISSIL 413
+A+ +F+ + K +V WT+M GY+ ++ E+ R F + +E P ++ + S+L
Sbjct: 343 VEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAF--IANETNTPDSLVMVSVL 400
Query: 414 PACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTI 473
AC A + G+EIHG+ LR G+ D + A +DMY K G + A +F E+DT+
Sbjct: 401 GACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTV 460
Query: 474 SWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNH 533
++ MI GC+ HG F + P D+ + A L AC + EG F
Sbjct: 461 MYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKP-DEITFMALLSACRHRGLVLEGEKYFKS 519
Query: 534 I-----RGPMIAHCAQKVSLLARCGLFDEAMVFIRE-QKIEQHPEVLRKLLEGCRIHGEY 587
+ P H + L + D+A+ + ++E+ +L L C +
Sbjct: 520 MIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNT 579
Query: 588 ALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLY 647
L K+V E+L +E N Y+ + N +A G+ D + +IR +R + L+ C+W
Sbjct: 580 ELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANI 639
Query: 648 REKVHVFGTGDVSHPRKKEICSALQ 672
++ H+F + D+SH + I + L
Sbjct: 640 DKQFHMFTSSDISHYETEAIYAMLH 664
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/489 (22%), Positives = 193/489 (39%), Gaps = 105/489 (21%)
Query: 214 MGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSM 273
M L+ G H+ ++K G +SN L+ +Y G +R+AR VF++M ++V SW ++
Sbjct: 1 MKCLKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAV 60
Query: 274 IRGCVQNGELSEAMELFRRMN-----------LEGLS----------------------- 299
I V+ + EA ELF N L G +
Sbjct: 61 IAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDD 120
Query: 300 VKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCG------ 353
+ D V+T++ + + ++ +G ++HG LV+ G + ++L+ MY+ CG
Sbjct: 121 IWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVC 180
Query: 354 -------------ASRDARL--------------VFEQMPS-KTVVSWTSMIRGYVKKGG 385
+R+A + VF + P +SW ++I GY + G
Sbjct: 181 NIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQN-G 239
Query: 386 FNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSN 445
+ E ++ M GLK S ++L + S K G+E+H +L+NG + VS+
Sbjct: 240 YEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSS 299
Query: 446 AVIDMYVK-------------------------------SGAIACALNVFGEMNEKDTIS 474
++D+Y K G + A +F ++EK+ +
Sbjct: 300 GIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVV 359
Query: 475 WSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNH- 533
W+ M G Q ++L R N D + + L ACS E G+ H
Sbjct: 360 WTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHS 419
Query: 534 IRGPMIAH---CAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALG 590
+R ++ V + ++CG + A I + E+ + ++ GC HG A
Sbjct: 420 LRTGILMDKKLVTAFVDMYSKCGNVEYAER-IFDSSFERDTVMYNAMIAGCAHHGHEAKS 478
Query: 591 KQVIEQLCE 599
Q E + E
Sbjct: 479 FQHFEDMTE 487
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 109/293 (37%), Gaps = 35/293 (11%)
Query: 55 QVFDKSPEW-DTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
VF ++PE DT++WNTLI + N + A+ M + +
Sbjct: 214 SVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSL 273
Query: 114 ADFSLGKQLHTHAVK----------------------LALSSRAHTLIALIHL------- 144
+GK++H +K + + AH L +L
Sbjct: 274 KSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMI 333
Query: 145 --YASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXX 202
Y+S + A+ LFD + WT + Y+ P S LEL +
Sbjct: 334 VGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDS 393
Query: 203 XXXXXXXXX-XMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEK 261
+ + G+++H +++ G+ + + + MY CG++ A +F+
Sbjct: 394 LVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDS 453
Query: 262 MPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVC 314
+D V + +MI GC +G +++ + F M G KPD + +L C
Sbjct: 454 SFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGF--KPDEITFMALLSAC 504
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 183 bits (465), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 221/466 (47%), Gaps = 43/466 (9%)
Query: 243 LKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKP 302
L ++D +R+A VF+++P DV+S T++I V+ EA + F+R L L ++P
Sbjct: 34 LVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKR--LLCLGIRP 91
Query: 303 DLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVF 362
+ TV+ +K G+++H Y ++ G+ +V + + +L Y DAR F
Sbjct: 92 NEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCF 151
Query: 363 EQMPSKTVVSWTSMIRGYVKK-------------------------GGF-----NNEVFR 392
+ VVS T++I GY+KK GGF N E
Sbjct: 152 DDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVN 211
Query: 393 LFRKMNSEGLK-PTAVSISSILPACGRIASHKHGREIHGYLLRN-GVEFDINVSNAVIDM 450
F M EG+ P + + A IASH G+ IH ++ G F++ V N++I
Sbjct: 212 TFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISF 271
Query: 451 YVKSGAIACALNVFGEMNE--KDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDD 508
Y K G + +L F ++ E ++ +SW+ MI+G + +G+G+ V +F ++ +++ ++
Sbjct: 272 YSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNN 331
Query: 509 NIYAAALHACSTARMFEEGRVCFNHIRGPM-------IAHCAQKVSLLARCGLFDEAMVF 561
L AC+ A + +EG + FN + H A V +L+R G F EA
Sbjct: 332 VTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEEL 391
Query: 562 IREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKL 621
I+ ++ + LL GC+IH L K ++ EL+P + +YV+L N ++
Sbjct: 392 IKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENW 451
Query: 622 DMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEI 667
V IR ++E GLK C+W R+++ VF D ++ K E+
Sbjct: 452 QNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEV 497
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 167/410 (40%), Gaps = 49/410 (11%)
Query: 125 HAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRS 184
H+ AL +++ I + + D I A +FD+ T + +V E
Sbjct: 17 HSSANALVTKSPNSIPELVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVE 76
Query: 185 ALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLK 244
A + F R++ ++ G+ +H A+K+GL VF +++L
Sbjct: 77 ASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLN 136
Query: 245 MYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM----------- 293
YV ++ DAR F+ +VVS T++I G ++ E EA+ LFR M
Sbjct: 137 CYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAV 196
Query: 294 ---------NLEGLSVKPDLVMVSTVLP-----VCGM-----IGSLKHGREIHGYLVRN- 333
N E ++ D++ V+P C + I S G+ IH ++
Sbjct: 197 IGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFL 256
Query: 334 GVECDVLLSNTLLKMYADCGASRDARLVFEQM--PSKTVVSWTSMIRGYVKKGGFNNEVF 391
G +V + N+L+ Y+ CG D+ L F ++ + +VSW SMI GY G E
Sbjct: 257 GKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGR-GEEAV 315
Query: 392 RLFRKM-NSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSN----- 445
+F KM L+P V+I +L AC + G GY+ N D + N
Sbjct: 316 AMFEKMVKDTNLRPNNVTILGVLFAC-----NHAGLIQEGYMYFNKAVNDYDDPNLLELE 370
Query: 446 ---AVIDMYVKSGAIACALNVFGEMNEKDTIS-WSMMIFGCSLHGQGKLG 491
++DM +SG A + M I W ++ GC +H +L
Sbjct: 371 HYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLA 420
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 152/367 (41%), Gaps = 44/367 (11%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
H+VFD+ PE D ++ +I + + A F ++L + +S +
Sbjct: 47 HKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTS 106
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
D LGKQLH +A+K+ L+S A+++ Y L + A+ FD T T L
Sbjct: 107 RDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLI 166
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXX-------XXXXXXXXXXXXXMMGSLRQ------- 219
Y+ + AL LF M + LR+
Sbjct: 167 SGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNE 226
Query: 220 ------------------GRDVHLIAVK-LGLEGEVFASNSLLKMYVDCGSMRDARLVFE 260
G+ +H A+K LG VF NSL+ Y CG+M D+ L F
Sbjct: 227 STFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFN 286
Query: 261 KM--PCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIG 318
K+ +++VSW SMI G NG EA+ +F +M ++ +++P+ V + VL C G
Sbjct: 287 KLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKM-VKDTNLRPNNVTILGVLFACNHAG 345
Query: 319 SLKHG-----REIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVS- 372
++ G + ++ Y N +E + ++ M + G ++A + + MP +
Sbjct: 346 LIQEGYMYFNKAVNDYDDPNLLELEHYA--CMVDMLSRSGRFKEAEELIKSMPLDPGIGF 403
Query: 373 WTSMIRG 379
W +++ G
Sbjct: 404 WKALLGG 410
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 158/619 (25%), Positives = 268/619 (43%), Gaps = 57/619 (9%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAAD 115
+F+K +T+ WNT+I ++ A F M + V
Sbjct: 62 IFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCG----- 116
Query: 116 FSLGKQLHTHAVKL--ALSSR-AHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFL 172
G + A KL + SR + + +I YA I A LF+K + W+ +
Sbjct: 117 ---GIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAM 173
Query: 173 AKLYVLEGMPRSALELFHRM-VXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLG 231
+ G SA+ LF +M V + G+ L++ G
Sbjct: 174 ITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVS---G 230
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMP---------------CKDVVSWTSMIRG 276
E V+A N+L+ Y G + AR +F+++P CK+VVSW SMI+
Sbjct: 231 REDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKA 290
Query: 277 CVQNGELSEAMELFRRM----NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVR 332
++ G++ A LF +M + ++ V VS + + + + R+ H +
Sbjct: 291 YLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPN-RDAHSW--- 346
Query: 333 NGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFR 392
N ++ YA G AR FE+ P K VSW S+I Y K + E
Sbjct: 347 ----------NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYK-EAVD 395
Query: 393 LFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYV 452
LF +MN EG KP +++S+L A + + + G ++H +++ + D+ V NA+I MY
Sbjct: 396 LFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYS 454
Query: 453 KSGAIACALNVFGEMN-EKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIY 511
+ G I + +F EM +++ I+W+ MI G + HG ++LF ++ N P +
Sbjct: 455 RCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYP-SHITF 513
Query: 512 AAALHACSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQK 566
+ L+AC+ A + +E + F + P + H + V++ + G F+EAM I
Sbjct: 514 VSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMP 573
Query: 567 IEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDK 626
E V LL+ CRI+ L E + LEP ++ YVLL N +A G D +
Sbjct: 574 FEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQ 633
Query: 627 IRETIRERGLKPKKACTWT 645
+R + + +K ++ +W
Sbjct: 634 VRMNMESKRIKKERGSSWV 652
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 134/291 (46%), Gaps = 58/291 (19%)
Query: 238 ASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEG 297
A+N L + G + +AR +FEK+ ++ V+W +MI G V+ E+++A +LF M
Sbjct: 42 ATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMP--- 98
Query: 298 LSVKPDLVMVSTVLP---VCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGA 354
K D+V +T++ CG I L+ R++ + D NT++ YA
Sbjct: 99 ---KRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRR 151
Query: 355 SRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILP 414
+A L+FE+MP + VSW++MI G+ + G ++ V LFRKM + P ++ ++
Sbjct: 152 IGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVV-LFRKMPVKDSSPLCALVAGLIK 210
Query: 415 ---------ACGRIASHKHGRE---------IHGYLLRNGVE-----FD----------- 440
G+ S GRE I GY R VE FD
Sbjct: 211 NERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHG 270
Query: 441 ----------INVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFG 481
+ N++I Y+K G + A +F +M ++DTISW+ MI G
Sbjct: 271 GEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDG 321
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 6/165 (3%)
Query: 342 SNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEG 401
+N L G +AR +FE++ ++ V+W +MI GYVK+ N + +LF M
Sbjct: 43 TNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMN-QARKLFDVMPKRD 101
Query: 402 LKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACAL 461
+ IS + +CG I + R++ + D N +I Y K+ I AL
Sbjct: 102 VVTWNTMISGYV-SCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRRIGEAL 156
Query: 462 NVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPL 506
+F +M E++ +SWS MI G +G+ V LFR++ +PL
Sbjct: 157 LLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPL 201
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 222/470 (47%), Gaps = 21/470 (4%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRD----ARLVFEKMPCKDVVSWT 271
+++Q + H + + GL +A + LL ++ ++ A +F+ + + +
Sbjct: 23 TVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYD 82
Query: 272 SMIRGCVQNGELSEAMELFRRM-NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYL 330
+MIR C ++ + + F M E + P + ++ C G++IH ++
Sbjct: 83 TMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWV 142
Query: 331 VRNGV-ECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNE 389
V+NGV D + +L++Y + DAR VF+++P VV W ++ GYV+ G +E
Sbjct: 143 VKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVR-CGLGSE 201
Query: 390 VFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRN-GVEFDINVSNAVI 448
+F++M G++P S+++ L AC ++ + G+ IH ++ + +E D+ V A++
Sbjct: 202 GLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALV 261
Query: 449 DMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDD 508
DMY K G I A+ VF ++ ++ SW+ +I G + +G K ++ER D
Sbjct: 262 DMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDS 321
Query: 509 NIYAAALHACSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIR 563
+ L AC+ EEGR ++ P H + V L+ R G D+A+ I
Sbjct: 322 VVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIE 381
Query: 564 EQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAEN----YVLLLNWHAGKG 619
+ ++ V LL GCR H LG+ ++ L +LE N E V L N +
Sbjct: 382 KMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQ 441
Query: 620 KLDMVDKIRETIRERGLKPKKACTWTLYREK--VHVFGTGDVSHPRKKEI 667
+ K+R I +RG+ +K W+L V F +GDVSHP +I
Sbjct: 442 RNPEAFKVRGMIEQRGI--RKTPGWSLLEVDGIVTKFVSGDVSHPNLLQI 489
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 141/331 (42%), Gaps = 8/331 (2%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHA---VXXXXXXXXXXXXASRL 112
+FD ++ ++T+I ++ L + F M++ + A
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLK 128
Query: 113 AADFSLGKQLHTHAVKLALS-SRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTF 171
A FS+GKQ+H VK + S H ++ +Y + A+ +FD+ W
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDV 188
Query: 172 LAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVH-LIAVKL 230
L YV G+ LE+F M+ +G+L QG+ +H + K
Sbjct: 189 LMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKR 248
Query: 231 GLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELF 290
+E +VF +L+ MY CG + A VFEK+ ++V SW ++I G G +A
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCL 308
Query: 291 RRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGRE-IHGYLVRNGVECDVLLSNTLLKMY 349
R+ E +KPD V++ VL C G L+ GR + R G+ + ++ +
Sbjct: 309 DRIERED-GIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLM 367
Query: 350 ADCGASRDARLVFEQMPSKTVVS-WTSMIRG 379
G DA + E+MP K + S W +++ G
Sbjct: 368 CRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 179 bits (454), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 140/592 (23%), Positives = 255/592 (43%), Gaps = 13/592 (2%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
H+ FD+ D + +N LI + AI + +M+ +
Sbjct: 66 HEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDE 125
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
G Q+H + L AL+ LYA L + VA LFD+ L
Sbjct: 126 LFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLL 185
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
+ + G + E++ RM + +G+ +H + VK G
Sbjct: 186 RCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWN 245
Query: 234 -GEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
+F +N L+ Y CG + + F +P KDV+SW S++ C G + ++++LF +
Sbjct: 246 ISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSK 305
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVL-LSNTLLKMYAD 351
M G +P + + L C ++ G++IH Y+++ G + L + + L+ MY
Sbjct: 306 MQFWG--KRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGK 363
Query: 352 CGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISS 411
C ++ L+++ +P + S++ + G ++ +F M EG V++S+
Sbjct: 364 CNGIENSALLYQSLPCLNLECCNSLMTS-LMHCGITKDIIEMFGLMIDEGTGIDEVTLST 422
Query: 412 ILPACG-RIASHKHG-REIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNE 469
+L A + H +H +++G D+ VS ++ID Y KSG + VF E++
Sbjct: 423 VLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDT 482
Query: 470 KDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRV 529
+ + +I G + +G G V + R+++R + P D+ + L CS + + EEG +
Sbjct: 483 PNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIP-DEVTILSVLSGCSHSGLVEEGEL 541
Query: 530 CFNHIR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIH 584
F+ + P A V LL R GL ++A + + + + LL+ CRIH
Sbjct: 542 IFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIH 601
Query: 585 GEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGL 636
+G++ E L LEP N Y+ + ++ G ++ +IRE R L
Sbjct: 602 RNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASREL 653
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 142/294 (48%), Gaps = 5/294 (1%)
Query: 236 VFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNL 295
V+ N + + G++ A F++M +DVV++ +I G + G A+EL+ M
Sbjct: 46 VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS 105
Query: 296 EGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGAS 355
GL + +VL VC + G ++H ++ G C++ + + L+ +YA
Sbjct: 106 CGL--RESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLV 163
Query: 356 RDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPA 415
A +F++M + + ++R + + G + +F ++ +M EG+ ++ ++
Sbjct: 164 DVALKLFDEMLDRNLAVCNLLLRCFCQTGE-SKRLFEVYLRMELEGVAKNGLTYCYMIRG 222
Query: 416 CGRIASHKHGREIHGYLLRNGVEF-DINVSNAVIDMYVKSGAIACALNVFGEMNEKDTIS 474
C G+++H ++++G +I V+N ++D Y G ++ ++ F + EKD IS
Sbjct: 223 CSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVIS 282
Query: 475 WSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGR 528
W+ ++ C+ +G +DLF +++ + P + + L+ CS + G+
Sbjct: 283 WNSIVSVCADYGSVLDSLDLFSKMQFWGKRP-SIRPFMSFLNFCSRNSDIQSGK 335
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 179 bits (453), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 220/458 (48%), Gaps = 50/458 (10%)
Query: 220 GRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQ 279
G+ +H ++K G+ +V +SL+ MY CG + AR VF++MP ++V +W +MI G +
Sbjct: 65 GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMS 124
Query: 280 NG--------------------------------ELSEAMELFRRMNLEGLSVKPDLVMV 307
NG E+ +A ELF RM E +VK VM+
Sbjct: 125 NGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVML 184
Query: 308 STVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPS 367
+ M + K +I E + + + ++ Y G +AR +F ++ +
Sbjct: 185 GVYVNNRKMEDARKFFEDIP--------EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFA 236
Query: 368 KTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGRE 427
+ +V W ++I GY + G++++ F M EG +P AV++SSIL AC + GRE
Sbjct: 237 RDLVIWNTLIAGYAQN-GYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGRE 295
Query: 428 IHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQ 487
+H + G+E + VSNA+IDMY K G + A +VF ++ + + MI ++HG+
Sbjct: 296 VHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGK 355
Query: 488 GKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG----PMIAHCA 543
GK +++F +E P D+ + A L AC EG F+ ++ P + H
Sbjct: 356 GKEALEMFSTMESLDLKP-DEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFG 414
Query: 544 QKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQV---IEQLCEL 600
+ LL R G EA ++E ++ + VL LL C++H + + +QV IE +
Sbjct: 415 CLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSI 474
Query: 601 EPLNAENYVL-LLNWHAGKGKLDMVDKIRETIRERGLK 637
+EN++ + N +A + + +R + +RGL+
Sbjct: 475 TNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLE 512
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 133/347 (38%), Gaps = 33/347 (9%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQM--LRHAVXXXXXXXXXXXXASRL 112
+VFD+ PE + WN +I ++SN LA F ++ R+ V
Sbjct: 102 KVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIE 161
Query: 113 AA-------DFSLGKQLHTHAVKLAL------------------SSRAHTLIALIHLYAS 147
A F L K + +V L + A ++ Y
Sbjct: 162 KARELFERMPFEL-KNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFR 220
Query: 148 LDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXX 207
+ D+ A+ +F + W L Y G A++ F M
Sbjct: 221 IGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSI 280
Query: 208 XXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDV 267
G L GR+VH + G+E F SN+L+ MY CG + +A VFE + + V
Sbjct: 281 LSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSV 340
Query: 268 VSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIH 327
SMI +G+ EA+E+F M E L +KPD + VL C G L G +I
Sbjct: 341 ACCNSMISCLAIHGKGKEALEMFSTM--ESLDLKPDEITFIAVLTACVHGGFLMEGLKIF 398
Query: 328 GYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQM---PSKTVV 371
+ V+ +V L+ + G ++A + ++M P+ TV+
Sbjct: 399 SEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVL 445
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 139/505 (27%), Positives = 230/505 (45%), Gaps = 79/505 (15%)
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
E V S++ Y G +R+A +F +MP +++VSWT+MI G N EA+ LF
Sbjct: 228 EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLE 287
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGS--LKHGREIHGYLVRNG---VECDVLLSNTLLK 347
M + +V P+ + ++ CG +G + G ++H ++ NG V+ D L+ +L+
Sbjct: 288 MKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVH 347
Query: 348 MYADCGASRDAR-----------------------------LVFEQMPS-KTVVSWTSMI 377
MYA G A+ +FE++ S VSWTSMI
Sbjct: 348 MYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMI 407
Query: 378 RGYVKKGGFNNEVFRLFRKMNSE-------------------------------GLKPTA 406
GY++ G + F LF+K++ + GLKP
Sbjct: 408 DGYLEAGDVS-RAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLN 466
Query: 407 VSISSILPACGRIASHKHGREIHGYLLRNGVEFDINV--SNAVIDMYVKSGAIACALNVF 464
+ S +L + G ++ G+ IH + + +D ++ N+++ MY K GAI A +F
Sbjct: 467 STYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIF 526
Query: 465 GEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMF 524
+M +KDT+SW+ MI G S HG ++LF+++ + + P + + L ACS + +
Sbjct: 527 AKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKP-NSVTFLGVLSACSHSGLI 585
Query: 525 EEGRVCFNHIR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLE 579
G F ++ P I H + LL R G EA FI V LL
Sbjct: 586 TRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLG 645
Query: 580 GC----RIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERG 635
C R + ++ +L EL+P+NA +V L N +AG G+ DM ++R+ + +G
Sbjct: 646 LCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKG 705
Query: 636 LKPKKACTWTLYREKVHVFGTGDVS 660
+K C+W + + +VF +GD S
Sbjct: 706 VKKTPGCSWVVVNGRANVFLSGDKS 730
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 130/273 (47%), Gaps = 52/273 (19%)
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
E + N++L YV C M +A +F +MP K+VVSWT M+ +G +A+ELF
Sbjct: 105 ERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDE 163
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMI--GSLKHGREIHGYLVRNGVECDVLLSNTLLKMYA 350
M P+ +VS V G+I G ++ +++ + DV+ N ++K Y
Sbjct: 164 M--------PERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYI 211
Query: 351 DCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKG-------------------------G 385
+ +A+L+F M K VV+WTSM+ GY + G G
Sbjct: 212 ENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISG 271
Query: 386 FN-NEVFR----LFRKM--NSEGLKPTAVSISSILPACGRIASH--KHGREIHGYLLRNG 436
F NE++R LF +M + + + P ++ S+ ACG + + G ++H ++ NG
Sbjct: 272 FAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNG 331
Query: 437 ---VEFDINVSNAVIDMYVKSGAIACALNVFGE 466
V+ D ++ +++ MY SG IA A ++ E
Sbjct: 332 WETVDHDGRLAKSLVHMYASSGLIASAQSLLNE 364
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 79/189 (41%), Gaps = 4/189 (2%)
Query: 140 ALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXX 199
++I Y D++ A LF K WT + V + A L MV
Sbjct: 405 SMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKP 464
Query: 200 XXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLG--LEGEVFASNSLLKMYVDCGSMRDARL 257
+L QG+ +H + K + ++ NSL+ MY CG++ DA
Sbjct: 465 LNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYE 524
Query: 258 VFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMI 317
+F KM KD VSW SMI G +G +A+ LF+ M G KP+ V VL C
Sbjct: 525 IFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSG--KKPNSVTFLGVLSACSHS 582
Query: 318 GSLKHGREI 326
G + G E+
Sbjct: 583 GLITRGLEL 591
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 124/259 (47%), Gaps = 24/259 (9%)
Query: 250 GSMRDARLVFEKMPCKD----VVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLV 305
G + AR + +K+P + VV WTS++ + G L EA LF M + ++V
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMP------ERNIV 109
Query: 306 MVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQM 365
+ +L G +K R + + + +V+ +L D G S DA +F++M
Sbjct: 110 TCNAML-----TGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEM 164
Query: 366 PSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHG 425
P + VVSW +++ G ++ G + ++F M S + VS ++++ G I G
Sbjct: 165 PERNVVSWNTLVTGLIRNGDM-EKAKQVFDAMPSRDV----VSWNAMIK--GYI--ENDG 215
Query: 426 REIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLH 485
E L + E ++ +++ Y + G + A +F EM E++ +SW+ MI G + +
Sbjct: 216 MEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWN 275
Query: 486 GQGKLGVDLFRQLERNSEA 504
+ + LF +++++ +A
Sbjct: 276 ELYREALMLFLEMKKDVDA 294
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 176 bits (445), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 201/429 (46%), Gaps = 54/429 (12%)
Query: 219 QGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCV 278
G H V+ G + N+L+ + +CG + A +F+ V+W+SM G
Sbjct: 130 NGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYA 189
Query: 279 QNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECD 338
+ G++ EAM LF M ++ V +
Sbjct: 190 KRGKIDEAMRLFDEMPY------------------------------------KDQVAWN 213
Query: 339 VLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMN 398
V+++ L C AR +F++ K VV+W +MI GYV G+ E +F++M
Sbjct: 214 VMITGCL-----KCKEMDSARELFDRFTEKDVVTWNAMISGYVN-CGYPKEALGIFKEMR 267
Query: 399 SEGLKPTAVSISSILPACGRIASHKHGREIHGYLLR-----NGVEFDINVSNAVIDMYVK 453
G P V+I S+L AC + + G+ +H Y+L + + + NA+IDMY K
Sbjct: 268 DAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAK 327
Query: 454 SGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAA 513
G+I A+ VF + ++D +W+ +I G +LH + +++F +++R P ++ +
Sbjct: 328 CGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWP-NEVTFIG 385
Query: 514 ALHACSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIE 568
+ ACS + +EGR F+ +R P I H V +L R G +EA +F+ KIE
Sbjct: 386 VILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIE 445
Query: 569 QHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIR 628
+ V R LL C+I+G LGK E+L + + +YVLL N +A G+ D V K+R
Sbjct: 446 PNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVR 505
Query: 629 ETIRERGLK 637
+ + +K
Sbjct: 506 KMFDDTRVK 514
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 19/260 (7%)
Query: 154 AQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXM 213
A+ LFD+ W + YV G P+ AL +F M +
Sbjct: 228 ARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAV 287
Query: 214 MGSLRQGRDVHLIAVKLG-LEGEVFAS----NSLLKMYVDCGSMRDARLVFEKMPCKDVV 268
+G L G+ +H+ ++ + ++ N+L+ MY CGS+ A VF + +D+
Sbjct: 288 LGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLS 347
Query: 269 SWTSMIRG-CVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIH 327
+W ++I G + + E S +E+F M + L V P+ V V+ C G + GR+
Sbjct: 348 TWNTLIVGLALHHAEGS--IEMFEEM--QRLKVWPNEVTFIGVILACSHSGRVDEGRKYF 403
Query: 328 GYLVRN--GVECDVLLSNTLLKMYADCGASRDARLVFEQMP-SKTVVSWTSM-----IRG 379
L+R+ +E ++ ++ M G +A + E M + W ++ I G
Sbjct: 404 S-LMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYG 462
Query: 380 YVKKGGFNNEVFRLFRKMNS 399
V+ G + NE RK S
Sbjct: 463 NVELGKYANEKLLSMRKDES 482
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 176 bits (445), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 138/498 (27%), Positives = 228/498 (45%), Gaps = 46/498 (9%)
Query: 216 SLRQGRDVHLIAVKLGL-EGEVFASNSL-LKMYVDCGSMRDARLVFEKMPCKDVVSWTSM 273
S+ + +H + + LGL E E F S +L G + A K+ W +
Sbjct: 20 SMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFV 79
Query: 274 IRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN 333
IRG + +++ ++ +M GL PD + ++ + + K G +H +V++
Sbjct: 80 IRGFSNSRNPEKSISVYIQMLRFGL--LPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKS 137
Query: 334 GVECDVLLSNTLLKMY-------------------------------ADCGASRDARLVF 362
G+E D+ + NTL+ MY A G ARLVF
Sbjct: 138 GLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVF 197
Query: 363 EQMPSKTVVSWTSMIRGYVKKGGFNN--EVFRLFRKMNSEGLKPTAVSISSILPACGRIA 420
++M + VV+W+SMI GYVK+G +N E+F +M S K V++ S++ AC +
Sbjct: 198 DEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSS--KANEVTMVSVICACAHLG 255
Query: 421 SHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVF--GEMNEKDTISWSMM 478
+ G+ +H Y+L + + + ++IDMY K G+I A +VF + E D + W+ +
Sbjct: 256 ALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAI 315
Query: 479 IFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR--- 535
I G + HG + + LF ++ R S+ D+ + L ACS + +E F ++
Sbjct: 316 IGGLASHGFIRESLQLFHKM-RESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESG 374
Query: 536 -GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVI 594
P H A V +L+R GL +A FI E I+ +L LL GC HG L + V
Sbjct: 375 AEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVG 434
Query: 595 EQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVF 654
++L EL+P N YV L N +A + +RE + ++G+K + H F
Sbjct: 435 KKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRF 494
Query: 655 GTGDVSHPRKKEICSALQ 672
D +H +I + LQ
Sbjct: 495 IAHDKTHFHSDKIYAVLQ 512
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 209/498 (41%), Gaps = 50/498 (10%)
Query: 121 QLHTHAVKLALSSRAHTLIALIHLYA--SLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVL 178
++HT + L LS + + A S D+ A K + + W F+ + +
Sbjct: 26 KIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSN 85
Query: 179 EGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFA 238
P ++ ++ +M+ + + + G +H VK GLE ++F
Sbjct: 86 SRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFI 145
Query: 239 SNSLLKMYVDCGSMRD---ARLVFEKMPCKDV---------------------------- 267
N+L+ MY GS RD AR +F++MP K++
Sbjct: 146 CNTLIHMY---GSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSE 202
Query: 268 ---VSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGR 324
V+W+SMI G V+ GE ++A+E+F +M G S ++ MVS V+ C +G+L G+
Sbjct: 203 RDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVS-VICACAHLGALNRGK 261
Query: 325 EIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTV--VSWTSMIRGYVK 382
+H Y++ + V+L +L+ MYA CG+ DA VF + K + W ++I G +
Sbjct: 262 TVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGG-LA 320
Query: 383 KGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDIN 442
GF E +LF KM + P ++ +L AC K L +G E
Sbjct: 321 SHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSE 380
Query: 443 VSNAVIDMYVKSGAIACALNVFGEMNEKDTISW-SMMIFGCSLHGQGKLGVDLFRQLERN 501
++D+ ++G + A + EM K T S ++ GC HG +L + ++L
Sbjct: 381 HYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIE- 439
Query: 502 SEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRGPMIAHCAQKVSLLARCGLFDEAMVF 561
P +D Y + + + F R +R M +K++ + L F
Sbjct: 440 -LQPHNDGRYVGLANVYAINKQFRAAR----SMREAMEKKGVKKIAGHSILDLDGTRHRF 494
Query: 562 IREQKIEQHPEVLRKLLE 579
I K H + + +L+
Sbjct: 495 IAHDKTHFHSDKIYAVLQ 512
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 204/440 (46%), Gaps = 42/440 (9%)
Query: 238 ASNSLLKMYVD-CGSMRD---ARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
SN LL ++ CGS+ + A VF + +V+ + +MI+ G E++ F M
Sbjct: 34 GSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSM 93
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCG 353
G + D + +L C + L+ G+ +HG L+R G + ++++Y G
Sbjct: 94 KSRG--IWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGG 151
Query: 354 ASRDARLVFEQMPSKTVVSWTSMIRGYVKKG----------------------------- 384
DA+ VF++M + VV W MIRG+ G
Sbjct: 152 RMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSK 211
Query: 385 -GFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFD-IN 442
G + E LF +M +G P ++ ++LP + G+ IH +G+ D I
Sbjct: 212 CGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFIT 271
Query: 443 VSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNS 502
V NA++D Y KSG + A +F +M ++ +SW+ +I G +++G+G+ G+DLF +
Sbjct: 272 VGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEG 331
Query: 503 EAPLDDNIYAAALHACSTARMFEEGRVCFNHI--RGPMIA---HCAQKVSLLARCGLFDE 557
+ ++ + L CS E G F + R + A H V L++R G E
Sbjct: 332 KVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITE 391
Query: 558 AMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAG 617
A F++ + + + LL CR HG+ L + +L ++EP N+ NYVLL N +A
Sbjct: 392 AFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAE 451
Query: 618 KGKLDMVDKIRETIRERGLK 637
+G+ V+K+R +++ L+
Sbjct: 452 EGRWQDVEKVRTLMKKNRLR 471
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 158/407 (38%), Gaps = 42/407 (10%)
Query: 121 QLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEG 180
++H H ++ L L I + SL + A +F + + K Y L G
Sbjct: 22 EIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVG 81
Query: 181 MPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVH----------LIAVKL 230
P +L F M + LR G+ VH L +++
Sbjct: 82 PPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRI 141
Query: 231 GL---------------------EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVS 269
G+ E V N +++ + D G + +F++M + +VS
Sbjct: 142 GVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVS 201
Query: 270 WTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGY 329
W SMI + G EA+ELF M +G PD V TVLP+ +G L G+ IH
Sbjct: 202 WNSMISSLSKCGRDREALELFCEMIDQGFD--PDEATVVTVLPISASLGVLDTGKWIHST 259
Query: 330 LVRNGVECD-VLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYV--KKGGF 386
+G+ D + + N L+ Y G A +F +M + VVSW ++I G KG F
Sbjct: 260 AESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEF 319
Query: 387 NNEVFRLFRKMNSEG-LKPTAVSISSILPACGRIASHKHGREIHGYLL-RNGVEFDINVS 444
LF M EG + P + +L C + G E+ G ++ R +E
Sbjct: 320 G---IDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHY 376
Query: 445 NAVIDMYVKSGAIACALNVFGEMN-EKDTISWSMMIFGCSLHGQGKL 490
A++D+ +SG I A M + W ++ C HG KL
Sbjct: 377 GAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKL 423
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 3/198 (1%)
Query: 325 EIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKG 384
EIH +L+R+ + LL + + S A VF + + V+ + +MI+ Y G
Sbjct: 22 EIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVG 81
Query: 385 GFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVS 444
E F M S G+ + + +L +C ++ + G+ +HG L+R G +
Sbjct: 82 P-PLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIR 140
Query: 445 NAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEA 504
V+++Y G + A VF EM+E++ + W++MI G G + G+ LF+Q+ S
Sbjct: 141 IGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIV 200
Query: 505 PLDDNIYAAALHACSTAR 522
+ I ++L C R
Sbjct: 201 SWNSMI--SSLSKCGRDR 216
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 208/468 (44%), Gaps = 47/468 (10%)
Query: 255 ARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVC 314
AR +F+ + +I+ + + E++ L+ ++ +GL +P + +
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGL--RPSHHTFNFIFAAS 92
Query: 315 GMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQM--------- 365
S + R +H R+G E D TL+ YA GA AR VF++M
Sbjct: 93 ASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWN 152
Query: 366 ----------------------PSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSE-GL 402
P K V SWT++I G+ + G + +E ++F M + +
Sbjct: 153 AMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNY-SEALKMFLCMEKDKSV 211
Query: 403 KPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALN 462
KP +++ S+LPAC + + GR + GY NG +I V NA I+MY K G I A
Sbjct: 212 KPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKR 271
Query: 463 VFGEM-NEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTA 521
+F E+ N+++ SW+ MI + HG+ + LF Q+ R E P D + L AC
Sbjct: 272 LFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKP-DAVTFVGLLLACVHG 330
Query: 522 RMFEEGRVCFN-----HIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRK 576
M +G+ F H P + H + LL R G EA I+ ++ V
Sbjct: 331 GMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGT 390
Query: 577 LLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGL 636
LL C HG + + E L +LEP N N V++ N +A K D V ++R+ +++ +
Sbjct: 391 LLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETM 450
Query: 637 KPKKACTWTLYRE---KVHVFGTGDVSHPRKKEICSALQGFMEEMRTE 681
KA ++ + E VH F D SHPR EI L+ M+ E
Sbjct: 451 --TKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMKLE 496
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 191/433 (44%), Gaps = 45/433 (10%)
Query: 120 KQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLE 179
KQLH H ++ + L L+ + ++ A+ LFD + + L + Y +
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLL----LIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVH 60
Query: 180 GMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFAS 239
P ++ L++ + S R R +H + G E + F
Sbjct: 61 HQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCC 120
Query: 240 NSLLKMYVDCGSMRDARLVFEKM-------------------------------PCKDVV 268
+L+ Y G++ AR VF++M P K+V
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVT 180
Query: 269 SWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHG 328
SWT++I G QNG SEA+++F M + SVKP+ + V +VLP C +G L+ GR + G
Sbjct: 181 SWTTVISGFSQNGNYSEALKMFLCMEKDK-SVKPNHITVVSVLPACANLGELEIGRRLEG 239
Query: 329 YLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPS-KTVVSWTSMIRGYVKKGGFN 387
Y NG ++ + N ++MY+ CG A+ +FE++ + + + SW SMI G + G +
Sbjct: 240 YARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMI-GSLATHGKH 298
Query: 388 NEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLR-NGVEFDINVSNA 446
+E LF +M EG KP AV+ +L AC G+E+ + + + +
Sbjct: 299 DEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGC 358
Query: 447 VIDMYVKSGAIACALNVFGEMNEK-DTISWSMMIFGCSLHGQ---GKLGVDLFRQLERNS 502
+ID+ + G + A ++ M K D + W ++ CS HG ++ + +LE +
Sbjct: 359 MIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTN 418
Query: 503 EAP--LDDNIYAA 513
+ NIYAA
Sbjct: 419 PGNCVIMSNIYAA 431
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 186/377 (49%), Gaps = 13/377 (3%)
Query: 269 SWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHG 328
+W + RG + E++ ++ M G +KP+ + +L C L GR+I
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRG--IKPNKLTFPFLLKACASFLGLTAGRQIQV 137
Query: 329 YLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNN 388
++++G + DV + N L+ +Y C + DAR VF++M + VVSW S++ V+ G N
Sbjct: 138 EVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKL-N 196
Query: 389 EVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVI 448
VF F +M + P ++ +L ACG + G+ +H ++ +E + + A++
Sbjct: 197 LVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALV 254
Query: 449 DMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDD 508
DMY KSG + A VF M +K+ +WS MI G + +G + + LF ++ + S +
Sbjct: 255 DMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNY 314
Query: 509 NIYAAALHACSTARMFEEGRVCFN-----HIRGPMIAHCAQKVSLLARCGLFDEAMVFIR 563
+ L ACS + ++G F+ H PM+ H V +L R G +EA FI+
Sbjct: 315 VTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIK 374
Query: 564 EQKIEQHPEVLRKLLEGCRIH---GEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGK 620
+ E V R LL C IH + +G++V ++L ELEP + N V++ N A
Sbjct: 375 KMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARM 434
Query: 621 LDMVDKIRETIRERGLK 637
++R ++E +K
Sbjct: 435 WAEAAEVRRVMKETKMK 451
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 160/350 (45%), Gaps = 30/350 (8%)
Query: 150 DIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXX 209
D+A A+TL ++ W L++ Y P ++ ++ M
Sbjct: 62 DLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLK 121
Query: 210 XXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVS 269
L GR + + +K G + +V+ N+L+ +Y C DAR VF++M ++VVS
Sbjct: 122 ACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVS 181
Query: 270 WTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGY 329
W S++ V+NG+L+ E F M G PD + +L CG G+L G+ +H
Sbjct: 182 WNSIMTALVENGKLNLVFECFCEMI--GKRFCPDETTMVVLLSACG--GNLSLGKLVHSQ 237
Query: 330 LVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNE 389
++ +E + L L+ MYA G ARLVFE+M K V +W++MI G + + GF E
Sbjct: 238 VMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVG-LAQYGFAEE 296
Query: 390 VFRLFRKMNSE-GLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEF--DINVSNA 446
+LF KM E ++P V+ +L AC H L+ +G ++ ++ +
Sbjct: 297 ALQLFSKMMKESSVRPNYVTFLGVLCACS-----------HTGLVDDGYKYFHEMEKIHK 345
Query: 447 VIDMYVKSGAIACALNVFGEMNEK-----------DTISWSMMIFGCSLH 485
+ M + GA+ L G +NE D + W ++ CS+H
Sbjct: 346 IKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIH 395
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 106/266 (39%), Gaps = 7/266 (2%)
Query: 58 DKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAADFS 117
D +P WN L + S++ +I +++M R + A +
Sbjct: 75 DSTPS----TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLT 130
Query: 118 LGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYV 177
G+Q+ +K + LIHLY + + A+ +FD+ W + V
Sbjct: 131 AGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALV 190
Query: 178 LEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVF 237
G E F M+ G+L G+ VH + LE
Sbjct: 191 ENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCR 248
Query: 238 ASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEG 297
+L+ MY G + ARLVFE+M K+V +W++MI G Q G EA++LF +M E
Sbjct: 249 LGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKES 308
Query: 298 LSVKPDLVMVSTVLPVCGMIGSLKHG 323
SV+P+ V VL C G + G
Sbjct: 309 -SVRPNYVTFLGVLCACSHTGLVDDG 333
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 98/206 (47%), Gaps = 6/206 (2%)
Query: 316 MIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRD---ARLVFEQMPSKTVVS 372
+ S+KH +IHG + + ++ D + + L+++ + ++D AR + T +
Sbjct: 22 LCSSIKHLLQIHGQIHLSSLQNDSFIISELVRV-SSLSLAKDLAFARTLLLHSSDSTPST 80
Query: 373 WTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYL 432
W + RGY ++ ++ +M G+KP ++ +L AC GR+I +
Sbjct: 81 WNMLSRGYSSSDSPVESIW-VYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 433 LRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGV 492
L++G +FD+ V N +I +Y + A VF EM E++ +SW+ ++ +G+ L
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVF 199
Query: 493 DLFRQLERNSEAPLDDNIYAAALHAC 518
+ F ++ P D+ L AC
Sbjct: 200 ECFCEMIGKRFCP-DETTMVVLLSAC 224
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/522 (25%), Positives = 233/522 (44%), Gaps = 14/522 (2%)
Query: 120 KQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLE 179
++LH+ K L+ + L YA DD+ A+ LFD W + + Y
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 180 GMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFAS 239
+ L LF +++ + R +H IA+ GL +
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 240 NSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLS 299
++++K Y G + +A +F +P D+ W MI G G + + LF M G
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGH- 203
Query: 300 VKPDLVMVSTVLPVCGMIGS--LKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRD 357
+P+ + V G+I L +H + ++ ++ + L+ MY+ C
Sbjct: 204 -QPNCY--TMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIAS 260
Query: 358 ARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACG 417
A VF + +V+ +S+I GY + G + E LF ++ G KP V ++ +L +C
Sbjct: 261 ACSVFNSISEPDLVACSSLITGYSRCGN-HKEALHLFAELRMSGKKPDCVLVAIVLGSCA 319
Query: 418 RIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSM 477
++ G+E+H Y++R G+E DI V +A+IDMY K G + CA+++F + EK+ +S++
Sbjct: 320 ELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNS 379
Query: 478 MIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG- 536
+I G LHG + F ++ P D+ ++A L C + + +G+ F ++
Sbjct: 380 LILGLGLHGFASTAFEKFTEILEMGLIP-DEITFSALLCTCCHSGLLNKGQEIFERMKSE 438
Query: 537 ----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQ 592
P H V L+ G +EA F+ + +L LL C +H L +
Sbjct: 439 FGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEV 498
Query: 593 VIEQLCEL-EPLNAENYVLLLNWHAGKGKLDMVDKIRETIRE 633
V E + + E + V+L N +A G+ D V+++R+ I E
Sbjct: 499 VAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISE 540
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 158/374 (42%), Gaps = 3/374 (0%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
++FD PE WN++I + + F +S F+Q+LR +
Sbjct: 61 KLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESF 120
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
D + +H A+ L A++ Y+ I A LF W +
Sbjct: 121 DTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMIL 180
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
Y G + LF+ M L VH +K+ L+
Sbjct: 181 GYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDS 240
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
+ +L+ MY C + A VF + D+V+ +S+I G + G EA+ LF +
Sbjct: 241 HSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELR 300
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGA 354
+ G KPD V+V+ VL C + G+E+H Y++R G+E D+ + + L+ MY+ CG
Sbjct: 301 MSG--KKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGL 358
Query: 355 SRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILP 414
+ A +F +P K +VS+ S+I G + GF + F F ++ GL P ++ S++L
Sbjct: 359 LKCAMSLFAGIPEKNIVSFNSLILG-LGLHGFASTAFEKFTEILEMGLIPDEITFSALLC 417
Query: 415 ACGRIASHKHGREI 428
C G+EI
Sbjct: 418 TCCHSGLLNKGQEI 431
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 215/433 (49%), Gaps = 21/433 (4%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIR 275
SL+ + +H + +GL + + LL + + A + ++P V + ++I
Sbjct: 21 SLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTV-CLSYALSILRQIPNPSVFLYNTLIS 79
Query: 276 GCVQNGELSE---AMELFRRMNLEGLS--VKPDLVMVSTVLPVCGMIGSL-KHGREIHGY 329
V N ++ A L+ ++ L S V+P+ ++ G +HGR +H +
Sbjct: 80 SIVSNHNSTQTHLAFSLYDQI-LSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAH 138
Query: 330 LVR--NGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFN 387
+++ V D + L+ YA+CG R+AR +FE++ + +W +++ Y +
Sbjct: 139 VLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEID 198
Query: 388 N--EVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSN 445
+ EV LF +M ++P +S+ +++ +C + G H Y+L+N + + V
Sbjct: 199 SDEEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGT 255
Query: 446 AVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAP 505
++ID+Y K G ++ A VF EM+++D ++ MI G ++HG G+ G++L++ L P
Sbjct: 256 SLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVP 315
Query: 506 LDDNIYAAALHACSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMV 560
D + + ACS + + +EG FN ++ P + H V LL R G +EA
Sbjct: 316 -DSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEE 374
Query: 561 FIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGK 620
I++ ++ + + R L + HG++ G+ ++ L LE N+ NYVLL N +AG +
Sbjct: 375 CIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNR 434
Query: 621 LDMVDKIRETIRE 633
V+K RE +++
Sbjct: 435 WTDVEKTRELMKD 447
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 134/342 (39%), Gaps = 13/342 (3%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFP---LAISTFTQMLR---HAVXXXXXXXXXXXXA 109
+ + P +NTLI + +SN++ LA S + Q+L + V A
Sbjct: 62 ILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKA 121
Query: 110 SRLAADFSL-GKQLHTHAVKL--ALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGS 166
S A + G+ LH H +K ++ AL+ YA+ + A++LF++
Sbjct: 122 SGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDL 181
Query: 167 DCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLI 226
W L Y S E+ + +G +G H+
Sbjct: 182 ATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVY 241
Query: 227 AVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEA 286
+K L F SL+ +Y CG + AR VF++M +DV + +MIRG +G E
Sbjct: 242 VLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEG 301
Query: 287 MELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYL-VRNGVECDVLLSNTL 345
+EL++ + +GL PD + C G + G +I + G+E V L
Sbjct: 302 IELYKSLISQGLV--PDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCL 359
Query: 346 LKMYADCGASRDARLVFEQMPSKTVVS-WTSMIRGYVKKGGF 386
+ + G +A ++MP K + W S + G F
Sbjct: 360 VDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDF 401
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 215/430 (50%), Gaps = 23/430 (5%)
Query: 220 GRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQ 279
GR VH + +K G E + +L+ MY G + D+ VFE + KD+VSW +++ G ++
Sbjct: 103 GRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLR 162
Query: 280 NGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDV 339
NG+ EA+ +F M E + + +S+V+ C + L+ G+++H +V G + V
Sbjct: 163 NGKGKEALGVFAAMYRERVEISE--FTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL-V 219
Query: 340 LLSNTLLKMYADCGASRDARLVFEQMPSKT-VVSWTSMIRGYVKKGGFNNEVFRLFRKMN 398
+L ++ Y+ G +A V+ + T V S+I G ++ + E F L +
Sbjct: 220 VLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYK-EAFLLMSRQ- 277
Query: 399 SEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIA 458
+P +SS L C + G++IH LRNG D + N ++DMY K G I
Sbjct: 278 ----RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIV 333
Query: 459 CALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNI-YAAALHA 517
A +F + K +SW+ MI +++G G +++FR++ L +++ + + A
Sbjct: 334 QARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISA 393
Query: 518 CSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPE 572
C+ A + +EG+ CF ++ P H + +L++ G +E + E+ +E +
Sbjct: 394 CAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLV-ERMMENDNQ 452
Query: 573 -----VLRKLLEGCRIHGEYALGKQVIEQLCE-LEPLNAENYVLLLNWHAGKGKLDMVDK 626
+ +L C ++ + G+ V +L E P NA YVL+ N++A GK D+V++
Sbjct: 453 SIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEE 512
Query: 627 IRETIRERGL 636
+R ++ +GL
Sbjct: 513 LRGKLKNKGL 522
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 201/477 (42%), Gaps = 32/477 (6%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAAD 115
+FD+ P+ D + N+ + +HL + + ++ F Q+ R + A L +
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSY 99
Query: 116 FSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKL 175
G+Q+H +K + + ALI +Y+ + + +F+ W L
Sbjct: 100 PETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSG 159
Query: 176 YVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGE 235
++ G + AL +F M + L+QG+ VH + V G +
Sbjct: 160 FLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLV 219
Query: 236 VFASNSLLKMYVDCGSMRDARLVFEKMPC-KDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
V + +++ Y G + +A V+ + D V S+I GC++N EA L R
Sbjct: 220 VLGT-AMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ- 277
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGA 354
+P++ ++S+ L C L G++IH +RNG D L N L+ MY CG
Sbjct: 278 ------RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQ 331
Query: 355 SRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSE--GLKPTAVSISSI 412
AR +F +PSK+VVSWTSMI Y G + +FR+M E G+ P +V+ +
Sbjct: 332 IVQARTIFRAIPSKSVVSWTSMIDAYAVNGD-GVKALEIFREMCEEGSGVLPNSVTFLVV 390
Query: 413 LPACGRIASHKHGREIHG-----YLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEM 467
+ AC K G+E G Y L G E + ID+ K+G + M
Sbjct: 391 ISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYV----CFIDILSKAGETEEIWRLVERM 446
Query: 468 NEKDTIS-----WSMMIFGCSLHGQGKLGVDLFRQL------ERNSEAPLDDNIYAA 513
E D S W ++ CSL+ G + R+L E S L N YAA
Sbjct: 447 MENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAA 503
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/470 (24%), Positives = 218/470 (46%), Gaps = 53/470 (11%)
Query: 214 MGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSM 273
M ++ G+ +H A+K GL G V+ L+ +Y G + A+ F+ + K+ VSW S+
Sbjct: 117 MENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSL 176
Query: 274 IRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYL-VR 332
+ G +++GEL EA +F ++ + D V + ++ G + + + + ++
Sbjct: 177 LHGYLESGELDEARRVFDKIP------EKDAVSWNLIISSYAKKGDMGNACSLFSAMPLK 230
Query: 333 NGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNN--EV 390
+ ++L+ Y +C + AR F+ MP K VSW +MI GY K G + E+
Sbjct: 231 SPASWNILIGG-----YVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEEL 285
Query: 391 FRLFRKMN------------------------------SEGLKPTAVSISSILPACGRIA 420
FRL K + + ++P +++SS++ A ++
Sbjct: 286 FRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLG 345
Query: 421 SHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIF 480
+ G + Y+ +G++ D +S ++ID+Y+K G A A +F +N+KDT+S+S MI
Sbjct: 346 NTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIM 405
Query: 481 GCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG---- 536
GC ++G LF + + P + + L A S + + +EG CFN ++
Sbjct: 406 GCGINGMATEANSLFTAMIEK-KIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLE 464
Query: 537 PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQ 596
P H V +L R G +EA I+ ++ + V LL +H G+
Sbjct: 465 PSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSH 524
Query: 597 LCELE--PLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTW 644
+LE P +++ ++ ++ G+ D +R++I+E+ L C+W
Sbjct: 525 CVKLETDPTGYLSHLAMI--YSSVGRWDDARTVRDSIKEKKLCKTLGCSW 572
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 173/411 (42%), Gaps = 51/411 (12%)
Query: 266 DVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGRE 325
D SW ++R Q+ + E ++++ M+ G + P V++VL CG + ++ G+
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSG--IPPSSHAVTSVLRACGKMENMVDGKP 125
Query: 326 IHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGG 385
IH ++NG+ V + L+ +Y+ G A+ F+ + K VSW S++ GY++ G
Sbjct: 126 IHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGE 185
Query: 386 FNNEVFRLFRKM---------------NSEGLKPTAVSISSILPACGR------IASHKH 424
+E R+F K+ +G A S+ S +P I + +
Sbjct: 186 L-DEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVN 244
Query: 425 GREIH-------GYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSM 477
RE+ +NGV + +S Y K G + A +F M++KD + +
Sbjct: 245 CREMKLARTYFDAMPQKNGVSWITMISG-----YTKLGDVQSAEELFRLMSKKDKLVYDA 299
Query: 478 MIFGCSLHGQGKLGVDLFRQ-LERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG 536
MI + +G+ K + LF Q LERNS D+ ++ + A S + G F
Sbjct: 300 MIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANS-----QLGNTSFGTWVE 354
Query: 537 PMIAHCAQKVSLLARCGLFDEAMV---FIREQKI-----EQHPEVLRKLLEGCRIHGEYA 588
I K+ L L D M F + K+ ++ ++ GC I+G
Sbjct: 355 SYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMAT 414
Query: 589 LGKQVIEQLCELE-PLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKP 638
+ + E + P N + LL+ ++ G + K ++++ L+P
Sbjct: 415 EANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEP 465
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 129/321 (40%), Gaps = 26/321 (8%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VFDK PE D ++WN +I ++ A S F+ M S +
Sbjct: 191 RVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAM---------------PLKSPASW 235
Query: 115 DFSLGKQLHTHAVKLALS-------SRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSD 167
+ +G ++ +KLA + + I +I Y L D+ A+ LF +
Sbjct: 236 NILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKL 295
Query: 168 CWTFLAKLYVLEGMPRSALELFHRMVXXXXXXX--XXXXXXXXXXXXMMGSLRQGRDVHL 225
+ + Y G P+ AL+LF +M+ +G+ G V
Sbjct: 296 VYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVES 355
Query: 226 IAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSE 285
+ G++ + S SL+ +Y+ G A +F + KD VS+++MI GC NG +E
Sbjct: 356 YITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATE 415
Query: 286 AMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTL 345
A LF M + + P++V + +L G ++ G + + + +E +
Sbjct: 416 ANSLFTAMIEK--KIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIM 473
Query: 346 LKMYADCGASRDARLVFEQMP 366
+ M G +A + + MP
Sbjct: 474 VDMLGRAGRLEEAYELIKSMP 494
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 138/568 (24%), Positives = 225/568 (39%), Gaps = 44/568 (7%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
QVF+ P WN ++ + F +++R
Sbjct: 170 QVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVK 229
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
D + KQLH A K L + +LI Y + +A+ +F + W +
Sbjct: 230 DLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIIC 289
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
P AL+LF M ++ L GR +H + +K G E
Sbjct: 290 ATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCET 349
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
+ N+L+ Y CG++ D+RL F+ + K++V W +++ G N + + LF +M
Sbjct: 350 GIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSG-YANKDGPICLSLFLQML 408
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGA 354
G +P ST L C + +++H +VR G E + + ++L++ YA
Sbjct: 409 QMGF--RPTEYTFSTALKSC----CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQL 462
Query: 355 SRDARLVFEQMPSKTVVSWTSMIRG-YVKKG----------------------------- 384
DA L+ + T V +++ G Y ++G
Sbjct: 463 MNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSR 522
Query: 385 -GFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVE-FDIN 442
++ EV LF+ M ++P + SIL C ++ G IHG + + D
Sbjct: 523 SDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTF 582
Query: 443 VSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNS 502
V N +IDMY K G+I + VF E EK+ I+W+ +I +HG G+ ++ F++
Sbjct: 583 VCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLG 642
Query: 503 EAPLDDNIYAAALHACSTARMFEEGRVCFNHIRG----PMIAHCAQKVSLLARCGLFDEA 558
P D + + L AC M +EG F ++ P + H V LLAR G EA
Sbjct: 643 FKP-DRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEA 701
Query: 559 MVFIREQKIEQHPEVLRKLLEGCRIHGE 586
IRE V R L+GC E
Sbjct: 702 EHLIREMPFPADAPVWRTFLDGCNRFAE 729
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 140/584 (23%), Positives = 242/584 (41%), Gaps = 55/584 (9%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+VFD+ PE + +++NT+I + A F++M + L
Sbjct: 70 KVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASL-- 127
Query: 115 DFSLGKQLHTHAVKLAL-SSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGS-DCWTFL 172
D G QLH ++K L + A L+ LY LD + +A+ +F+ PF S + W +
Sbjct: 128 DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDM-PFKSLETWNHM 186
Query: 173 AKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL 232
L G + + F +V + L + +H A K GL
Sbjct: 187 MSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGL 246
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
+ E+ NSL+ Y CG+ A +F+ D+VSW ++I ++ +A++LF
Sbjct: 247 DCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVS 306
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADC 352
M G S P+ +VL V ++ L GR+IHG L++NG E ++L N L+ YA C
Sbjct: 307 MPEHGFS--PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKC 364
Query: 353 GASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSI 412
G D+RL F+ + K +V W +++ GY K G LF +M G +PT + S+
Sbjct: 365 GNLEDSRLCFDYIRDKNIVCWNALLSGYANKDG--PICLSLFLQMLQMGFRPTEYTFSTA 422
Query: 413 LPACGRIASHKHGREIHGYLLRNGVEFDINV----------------------------- 443
L +C +++H ++R G E + V
Sbjct: 423 LKSC----CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTS 478
Query: 444 ---SNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLER 500
N V +Y + G ++ + + + DT+SW++ I CS + ++LF+ + +
Sbjct: 479 VVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQ 538
Query: 501 NSEAPLDDNIYAAALHACS-----TARMFEEGRVCFNHIRGPMIAHCAQKVSLLARCGLF 555
++ P D + + L CS T G + C + + +CG
Sbjct: 539 SNIRP-DKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSI 597
Query: 556 DEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCE 599
M E + E++ L+ IHG G++ +E+ E
Sbjct: 598 RSVMKVFEETR-EKNLITWTALISCLGIHG---YGQEALEKFKE 637
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 166/366 (45%), Gaps = 24/366 (6%)
Query: 216 SLRQGRDVHLIAVKLG--LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSM 273
S + + +H +++ L L V+ N+++ +Y G + A VF++MP ++ VS+ ++
Sbjct: 27 SFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTI 86
Query: 274 IRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN 333
I+G + G++ +A +F M G P+ VS +L + ++ G ++HG ++
Sbjct: 87 IKGYSKYGDVDKAWGVFSEMRYFG--YLPNQSTVSGLLSCASL--DVRAGTQLHGLSLKY 142
Query: 334 GV-ECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFR 392
G+ D + LL +Y A VFE MP K++ +W M+ + GF E
Sbjct: 143 GLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMM-SLLGHRGFLKECMF 201
Query: 393 LFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYV 452
FR++ G T S +L + +++H + G++ +I+V N++I Y
Sbjct: 202 FFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYG 261
Query: 453 KSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYA 512
K G A +F + D +SW+ +I + + LF + + +P + Y
Sbjct: 262 KCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSP-NQGTYV 320
Query: 513 AALHACSTARMFEEGRVCFNHIRGPMIAHCAQK--------VSLLARCGLFDEAMV---F 561
+ L S ++ GR I G +I + + + A+CG +++ + +
Sbjct: 321 SVLGVSSLVQLLSCGR----QIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDY 376
Query: 562 IREQKI 567
IR++ I
Sbjct: 377 IRDKNI 382
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 201/452 (44%), Gaps = 14/452 (3%)
Query: 221 RDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQN 280
R+ A + G +F+ N+ + R R E + + T ++G
Sbjct: 32 REFQTEASQTSASGSMFSGNATTILRRMLAEKRIGRFQVENQRKTEKLDKT--LKGLCVT 89
Query: 281 GELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVL 340
G L EA+ L GL V+P+ V +L C G+ IH + G +
Sbjct: 90 GRLKEAVGLLWS---SGLQVEPETYAV--LLQECKQRKEYTKGKRIHAQMFVVGFALNEY 144
Query: 341 LSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSE 400
L LL +YA G + A ++F + + ++ W +MI GYV+KG E ++ M
Sbjct: 145 LKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKG-LEQEGLFIYYDMRQN 203
Query: 401 GLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACA 460
+ P + +S+ AC + +HG+ H +++ ++ +I V +A++DMY K + +
Sbjct: 204 RIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDG 263
Query: 461 LNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACST 520
VF +++ ++ I+W+ +I G HG+ + F +++ P + + L AC+
Sbjct: 264 HRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRP-NPVTFLVVLTACNH 322
Query: 521 ARMFEEGRVCFNHIR-----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLR 575
+ ++G F ++ P H A V L R G EA F+ + ++HP V
Sbjct: 323 GGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWG 382
Query: 576 KLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERG 635
LL CRIHG L + + EL+P N NYV+ N +A G + K+R + G
Sbjct: 383 SLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAG 442
Query: 636 LKPKKACTWTLYREKVHVFGTGDVSHPRKKEI 667
+K + + +VH F D SH ++I
Sbjct: 443 VKKDPGYSQIELQGEVHRFMKDDTSHRLSEKI 474
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 102/224 (45%), Gaps = 5/224 (2%)
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
+++ GK++H + + + + L+ LYA D+ A LF W +
Sbjct: 123 EYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMIS 182
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEG 234
YV +G+ + L +++ M + L G+ H + +K ++
Sbjct: 183 GYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKS 242
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
+ ++L+ MY C S D VF+++ ++V++WTS+I G +G++SE ++ F +M
Sbjct: 243 NIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMK 302
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN--GVE 336
EG +P+ V VL C G + G E H Y ++ G+E
Sbjct: 303 EEG--CRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDYGIE 343
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 199/397 (50%), Gaps = 17/397 (4%)
Query: 274 IRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN 333
++ +++GE +A+ FR + S ++ + S GR+IH + +
Sbjct: 35 LKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKL 94
Query: 334 GVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK-TVVSWTSMIRGYVKKGGFNNEVFR 392
G + + +L+ Y+ G AR VF++ P K +V WT+MI Y + + E
Sbjct: 95 GFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENEN-SVEAIE 153
Query: 393 LFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNG--VEFDINVSNAVIDM 450
LF++M +E ++ V ++ L AC + + + G EI+ ++ + D+ + N++++M
Sbjct: 154 LFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNM 213
Query: 451 YVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLE-----RNSEAP 505
YVKSG A +F E KD +++ MIFG +L+GQ + ++LF++++ +++
Sbjct: 214 YVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVIT 273
Query: 506 LDDNIYAAALHACSTARMFEEGRVCF-----NHIRGPMIAHCAQKVSLLARCGLFDEAMV 560
+D + L ACS + + EEG+ F ++ P AH V L R G +A
Sbjct: 274 PNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHE 333
Query: 561 FIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGK 620
FI + I+ + + R LL C +HG LG++V ++ EL+ + +YV L N +A KG
Sbjct: 334 FINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGM 393
Query: 621 LDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTG 657
D K+R+ +R+R + K +W ++ F +G
Sbjct: 394 WDEKSKMRDRVRKRRMPGK---SWIELGSIINEFVSG 427
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 123/269 (45%), Gaps = 11/269 (4%)
Query: 119 GKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDC--WTFLAKLY 176
G+Q+H KL ++ +L+ Y+S+ D+ A+ +FD+T P + WT + Y
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDET-PEKQNIVLWTAMISAY 142
Query: 177 VLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLG--LEG 234
A+ELF RM +G+++ G +++ ++K L
Sbjct: 143 TENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAM 202
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
++ NSLL MYV G AR +F++ KDV ++TSMI G NG+ E++ELF++M
Sbjct: 203 DLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMK 262
Query: 295 L----EGLSVKPDLVMVSTVLPVCGMIGSLKHG-REIHGYLVRNGVECDVLLSNTLLKMY 349
+ + P+ V VL C G ++ G R ++ ++ ++ ++
Sbjct: 263 TIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLF 322
Query: 350 ADCGASRDARLVFEQMPSK-TVVSWTSMI 377
G +DA QMP K V W +++
Sbjct: 323 CRSGHLKDAHEFINQMPIKPNTVIWRTLL 351
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 186/423 (43%), Gaps = 39/423 (9%)
Query: 264 CKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHG 323
C ++S T + G +A+ LF +M+ ++ D + S L C G
Sbjct: 9 CTKLISLTKQLSSYANQGNHEQALNLFLQMH-SSFALPLDAHVFSLALKSCAAAFRPVLG 67
Query: 324 REIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKK 383
+H + V++ + + LL MY C + AR +F+++P + V W +MI Y
Sbjct: 68 GSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHC 127
Query: 384 GGFNNEV--------------------------------FRLFRKMNSEGLKPTAVSISS 411
G V +RKM KP +++ +
Sbjct: 128 GKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLA 187
Query: 412 ILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKD 471
++ AC I + + +EIH Y RN +E + + +++ Y + G+I VF M ++D
Sbjct: 188 LVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRD 247
Query: 472 TISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCF 531
++WS +I +LHG + + F+++E P DD + L ACS A + +E V F
Sbjct: 248 VVAWSSLISAYALHGDAESALKTFQEMELAKVTP-DDIAFLNVLKACSHAGLADEALVYF 306
Query: 532 NHIRGPM-----IAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGE 586
++G H + V +L+R G F+EA I+ + + LL CR +GE
Sbjct: 307 KRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGE 366
Query: 587 YALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTL 646
L + +L +EP N NYVLL + G+ + +++R ++E G+K +W L
Sbjct: 367 IELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSWCL 426
Query: 647 YRE 649
+++
Sbjct: 427 FKD 429
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 143/316 (45%), Gaps = 42/316 (13%)
Query: 220 GRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQ 279
G VH +VK F +LL MY C S+ AR +F+++P ++ V W +MI
Sbjct: 67 GGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTH 126
Query: 280 NGELSEAMELFRRMN-----------LEGL--------------------SVKPDLVMVS 308
G++ EA+EL+ M+ ++GL KP+L+ +
Sbjct: 127 CGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLL 186
Query: 309 TVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK 368
++ C IG+ + +EIH Y RN +E L + L++ Y CG+ +LVF+ M +
Sbjct: 187 ALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDR 246
Query: 369 TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKH-GRE 427
VV+W+S+I Y G + + F++M + P ++ ++L AC SH E
Sbjct: 247 DVVAWSSLISAYALHGDAES-ALKTFQEMELAKVTPDDIAFLNVLKAC----SHAGLADE 301
Query: 428 IHGYLLRNGVEFDINVS----NAVIDMYVKSGAIACALNVFGEMNEKDTI-SWSMMIFGC 482
Y R ++ + S + ++D+ + G A V M EK T +W ++ C
Sbjct: 302 ALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGAC 361
Query: 483 SLHGQGKLGVDLFRQL 498
+G+ +L R+L
Sbjct: 362 RNYGEIELAEIAAREL 377
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 119/298 (39%), Gaps = 43/298 (14%)
Query: 118 LGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYV 177
LG +H H+VK S AL+ +Y ++ A+ LFD+ + W + Y
Sbjct: 66 LGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYT 125
Query: 178 --------------LEGMPRS-------------------ALELFHRMVXXXXXXXXXXX 204
++ MP A+E + +M+
Sbjct: 126 HCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITL 185
Query: 205 XXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPC 264
+G+ R +++H A + +E + L++ Y CGS+ +LVF+ M
Sbjct: 186 LALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMED 245
Query: 265 KDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIG----SL 320
+DVV+W+S+I +G+ A++ F+ M L V PD + VL C G +L
Sbjct: 246 RDVVAWSSLISAYALHGDAESALKTFQEMELA--KVTPDDIAFLNVLKACSHAGLADEAL 303
Query: 321 KHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK-TVVSWTSMI 377
+ + + G G+ + L+ + + G +A V + MP K T +W +++
Sbjct: 304 VYFKRMQG---DYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALL 358
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 204/464 (43%), Gaps = 44/464 (9%)
Query: 255 ARLVFEKMPCKDVVSWTSMIRGCVQNGEL--SEAMELFRRMNLEGLSVKPDLVMVSTVLP 312
AR +F++ + + +++ + L S A FR M + +P+ + VL
Sbjct: 76 ARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVP-RPNHFIYPLVLK 134
Query: 313 VCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRD-ARLVFEQMPSKTVV 371
+ S +H +L ++G V++ LL YA + AR +F++M + VV
Sbjct: 135 STPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVV 194
Query: 372 SWTSMIRGYVKKGGFNN------------------------------EVFRLFRKM-NSE 400
SWT+M+ GY + G +N E LFR+M N
Sbjct: 195 SWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEP 254
Query: 401 GLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACA 460
++P V++ +L AC + + + + IH + R + D+ VSN+++D+Y K G + A
Sbjct: 255 SIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEA 314
Query: 461 LNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLER---NSEAPLDDNIYAAALHA 517
+VF ++K +W+ MI +LHG+ + + +F ++ + N P D + L+A
Sbjct: 315 SSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKP-DHITFIGLLNA 373
Query: 518 CSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPE 572
C+ + +GR F+ + P I H + LL R G FDEA+ + K++
Sbjct: 374 CTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEA 433
Query: 573 VLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIR 632
+ LL C+IHG L + ++ L L P N ++ N + G + + R+ I+
Sbjct: 434 IWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIK 493
Query: 633 ERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFME 676
+ + +VH F + D SHP +EI L +
Sbjct: 494 HQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLIS 537
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 127/263 (48%), Gaps = 5/263 (1%)
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
E V + ++L Y G + +A +FE MP +DV SW +++ C QNG EA+ LFRR
Sbjct: 190 ERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRR 249
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADC 352
M + S++P+ V V VL C G+L+ + IH + R + DV +SN+L+ +Y C
Sbjct: 250 M-INEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKC 308
Query: 353 GASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNN--EVFRLFRKMNSEGLKPTAVSIS 410
G +A VF+ K++ +W SMI + G VF K+N +KP ++
Sbjct: 309 GNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFI 368
Query: 411 SILPACGRIASHKHGREIHGYLL-RNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNE 469
+L AC GR + R G+E I +ID+ ++G AL V M
Sbjct: 369 GLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKM 428
Query: 470 K-DTISWSMMIFGCSLHGQGKLG 491
K D W ++ C +HG L
Sbjct: 429 KADEAIWGSLLNACKIHGHLDLA 451
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 129/328 (39%), Gaps = 22/328 (6%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAAD 115
V +P + L+HTHL + F L + T +L AS ++
Sbjct: 132 VLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLH-------------SYASSVS-H 177
Query: 116 FSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKL 175
+L +QL + + S A++ YA DI+ A LF+ W +
Sbjct: 178 ITLARQLFDEMSERNVVS----WTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAA 233
Query: 176 YVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXX-XMMGSLRQGRDVHLIAVKLGLEG 234
G+ A+ LF RM+ G+L+ + +H A + L
Sbjct: 234 CTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSS 293
Query: 235 EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR-M 293
+VF SNSL+ +Y CG++ +A VF+ K + +W SMI +G EA+ +F M
Sbjct: 294 DVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMM 353
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLV-RNGVECDVLLSNTLLKMYADC 352
L +KPD + +L C G + GR + R G+E + L+ +
Sbjct: 354 KLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRA 413
Query: 353 GASRDARLVFEQMPSKTVVS-WTSMIRG 379
G +A V M K + W S++
Sbjct: 414 GRFDEALEVMSTMKMKADEAIWGSLLNA 441
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 92/217 (42%), Gaps = 11/217 (5%)
Query: 320 LKHGREIHGYLVRNGVECDVLLSNTLLKM--YADCGASRDARLVFEQMPSKTVVSWTSMI 377
L H +++ +++ +G+ L LL+ C S AR +F++ + +++
Sbjct: 37 LNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSY-ARFIFDRFSFPNTHLYAAVL 95
Query: 378 RGYVKKGGFN-NEVFRLFRKM-NSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRN 435
Y + + F FR M N +P +L + ++S +H +L ++
Sbjct: 96 TAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKS 155
Query: 436 GVEFDINVSNAVIDMYVKSGA-IACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDL 494
G + V A++ Y S + I A +F EM+E++ +SW+ M+ G + G V L
Sbjct: 156 GFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVAL 215
Query: 495 FRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCF 531
F + D + A L AC+ +F E F
Sbjct: 216 FEDMPER-----DVPSWNAILAACTQNGLFLEAVSLF 247
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 187/382 (48%), Gaps = 11/382 (2%)
Query: 270 WTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGY 329
W +++R +++ +A++++ + + +V PD + V+ I G+E+H
Sbjct: 85 WNNIMRSYIRHESPLDAIQVY--LGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSV 142
Query: 330 LVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNE 389
VR G D + + +Y G +AR VF++ P + + SW ++I G + G NE
Sbjct: 143 AVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGG-LNHAGRANE 201
Query: 390 VFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVE--FDINVSNAV 447
+F M GL+P ++ S+ +CG + ++H +L+ E DI + N++
Sbjct: 202 AVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSL 261
Query: 448 IDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLD 507
IDMY K G + A ++F EM +++ +SWS MI G + +G ++ FRQ+ P +
Sbjct: 262 IDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRP-N 320
Query: 508 DNIYAAALHACSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFI 562
+ L AC + EEG+ F ++ P ++H V LL+R G EA +
Sbjct: 321 KITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVV 380
Query: 563 REQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLD 622
E ++ + V L+ GC G+ + + V + ELEP N YV+L N +A +G
Sbjct: 381 EEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWK 440
Query: 623 MVDKIRETIRERGLKPKKACTW 644
V+++R+ ++ + + A ++
Sbjct: 441 DVERVRKLMKTKKVAKIPAYSY 462
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 157/327 (48%), Gaps = 12/327 (3%)
Query: 169 WTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAV 228
W + + Y+ P A++++ MV + G+++H +AV
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 229 KLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAME 288
+LG G+ F + + +Y G +AR VF++ P + + SW ++I G G +EA+E
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 289 LFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVE--CDVLLSNTLL 346
+F M GL +PD + +V CG +G L ++H +++ E D+++ N+L+
Sbjct: 205 MFVDMKRSGL--EPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLI 262
Query: 347 KMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTA 406
MY CG A +FE+M + VVSW+SMI GY G E FR+M G++P
Sbjct: 263 DMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGN-TLEALECFRQMREFGVRPNK 321
Query: 407 VSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSN--AVIDMYVKSGAIACALNVF 464
++ +L AC + G+ ++++ E + +S+ ++D+ + G + A V
Sbjct: 322 ITFVGVLSACVHGGLVEEGKTYFA-MMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVV 380
Query: 465 GEMNEKDTISWSMMIFGCSLHGQGKLG 491
EM K + M++GC + G K G
Sbjct: 381 EEMPMKPNV----MVWGCLMGGCEKFG 403
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 148/335 (44%), Gaps = 10/335 (2%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
++ D+ P WN ++ +++ + AI + M+R V A+
Sbjct: 74 RILDQYP--IAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIH 131
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAK 174
DF+LGK+LH+ AV+L I LY + A+ +FD+ W +
Sbjct: 132 DFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIG 191
Query: 175 LYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVH--LIAVKLGL 232
G A+E+F M +G L +H ++ K
Sbjct: 192 GLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEE 251
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
+ ++ NSL+ MY CG M A +FE+M ++VVSW+SMI G NG EA+E FR+
Sbjct: 252 KSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQ 311
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNT--LLKMYA 350
M G V+P+ + VL C G ++ G+ ++++ E + LS+ ++ + +
Sbjct: 312 MREFG--VRPNKITFVGVLSACVHGGLVEEGKTYFA-MMKSEFELEPGLSHYGCIVDLLS 368
Query: 351 DCGASRDARLVFEQMPSK-TVVSWTSMIRGYVKKG 384
G ++A+ V E+MP K V+ W ++ G K G
Sbjct: 369 RDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFG 403
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 97/240 (40%), Gaps = 12/240 (5%)
Query: 55 QVFDKSPEWDTLAWNTLI----HTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXAS 110
+VFD++PE +WN +I H +N A+ F M R + +
Sbjct: 173 KVFDENPERKLGSWNAIIGGLNHAGRANE----AVEMFVDMKRSGLEPDDFTMVSVTASC 228
Query: 111 RLAADFSLGKQLHTHAVKLALSSRAHTLI--ALIHLYASLDDIAVAQTLFDKTAPFGSDC 168
D SL QLH ++ ++ ++ +LI +Y + +A +F++
Sbjct: 229 GGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVS 288
Query: 169 WTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVH-LIA 227
W+ + Y G ALE F +M G + +G+ ++
Sbjct: 289 WSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMK 348
Query: 228 VKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCK-DVVSWTSMIRGCVQNGELSEA 286
+ LE + ++ + G +++A+ V E+MP K +V+ W ++ GC + G++ A
Sbjct: 349 SEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 177/346 (51%), Gaps = 22/346 (6%)
Query: 320 LKHGREIHGYLVRNGVECDV-LLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIR 378
L+ GR +HG + + G + L+ TLL YA G R AR VF++MP +T V+W +MI
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 379 GYVK---KGGFN-NEVFRLFRKMN--SEGLKPTAVSISSILPACGRIASHKHGREIHGYL 432
GY KG N + LFR+ + G++PT ++ +L A + + G +HGY+
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 433 LRNGV--EFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKL 490
+ G E D+ + A++DMY K G + A +VF M K+ +W+ M G +L+G+G
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNE 306
Query: 491 GVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR-----GPMIAHCAQK 545
+L ++ + P ++ + + L A + EEG F ++ P+I H
Sbjct: 307 TPNLLNRMAESGIKP-NEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCI 365
Query: 546 VSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLN- 604
V LL + G EA FI I+ +LR L C I+GE +G+++ + L E+E +
Sbjct: 366 VDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDE 425
Query: 605 ------AENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTW 644
E+YV L N A KGK V+K+R+ ++ER +K + ++
Sbjct: 426 KLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSF 471
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 106/262 (40%), Gaps = 13/262 (4%)
Query: 118 LGKQLHTHAVKLALSSRAHTL-IALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLY 176
+G+ +H KL + + L+H YA D+ A+ +FD+ S W + Y
Sbjct: 129 VGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGY 188
Query: 177 VLEG-----MPRSALELFHRM--VXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVK 229
R A+ LF R G L G VH K
Sbjct: 189 CSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEK 248
Query: 230 LGL--EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAM 287
LG E +VF +L+ MY CG + +A VFE M K+V +WTSM G NG +E
Sbjct: 249 LGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETP 308
Query: 288 ELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYL-VRNGVECDVLLSNTLL 346
L RM G +KP+ + +++L IG ++ G E+ + R GV + ++
Sbjct: 309 NLLNRMAESG--IKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIV 366
Query: 347 KMYADCGASRDARLVFEQMPSK 368
+ G ++A MP K
Sbjct: 367 DLLGKAGRIQEAYQFILAMPIK 388
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 176/371 (47%), Gaps = 30/371 (8%)
Query: 412 ILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKD 471
I CG + + + +H ++ + DI+ N++I+MY G++ AL VF M E++
Sbjct: 187 IAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERN 246
Query: 472 TISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCF 531
+W +I + +GQG+ +D F + ++ P D ++ AC EG + F
Sbjct: 247 LETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKP-DGEMFKEIFFACGVLGDMNEGLLHF 305
Query: 532 NHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGE 586
+ P + H V +LA G DEA+ F+ + +E + ++ L+ R+HG+
Sbjct: 306 ESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFV--ESMEPNVDLWETLMNLSRVHGD 363
Query: 587 YALG---KQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACT 643
LG + ++EQL + LN E+ AG + D ++E ++ P
Sbjct: 364 LILGDRCQDMVEQL-DASRLNKES-------KAGLVPVKSSDLVKEKLQRMAKGPNYG-- 413
Query: 644 WTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEE-RECTQ 702
+ GD+S P +E+ AL+ E M G P +LHDVD+E ++
Sbjct: 414 -------IRYMAAGDISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENL 466
Query: 703 IEHSELLALAFGLISSQAGP-IRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHF 761
H+E A + + A IR+ KN RVC CH+ K +SK+ GRE+I +D FHH
Sbjct: 467 FNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHM 526
Query: 762 KHGHCTCEDFW 772
K G C+C ++W
Sbjct: 527 KDGVCSCREYW 537
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Query: 216 SLRQGRDVH-LIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMI 274
+L++ + VH I +G+ ++ A NS+++MY CGS+ DA VF MP +++ +W +I
Sbjct: 196 ALQEAKVVHEFITSSVGIS-DISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVI 254
Query: 275 RGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHG 323
R +NG+ +A++ F R EG KPD M + CG++G + G
Sbjct: 255 RCFAKNGQGEDAIDTFSRFKQEG--NKPDGEMFKEIFFACGVLGDMNEG 301
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 281 GELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVL 340
G++ +A+E+ + EG V DL + + +CG +L+ + +H ++ + D+
Sbjct: 160 GKVKKAVEIIKSWRNEGYVV--DLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDIS 217
Query: 341 LSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSE 400
N++++MY+ CG+ DA VF MP + + +W +IR + K G + F + E
Sbjct: 218 AYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQ-GEDAIDTFSRFKQE 276
Query: 401 GLKPTAVSISSILPACGRIASHKHG 425
G KP I ACG + G
Sbjct: 277 GNKPDGEMFKEIFFACGVLGDMNEG 301
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 194/433 (44%), Gaps = 56/433 (12%)
Query: 255 ARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVC 314
A VF + + ++IR C + S + + F + + SV PD V C
Sbjct: 67 ATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFF-VEMRRRSVPPDFHTFPFVFKAC 125
Query: 315 GMI--GSLKHGREIHGYLVRNGVECDVLLSNTLLKMYA------------DCGASRD--- 357
G L + +H +R G+ D+ NTL+++Y+ D RD
Sbjct: 126 AAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVT 185
Query: 358 ----------------ARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEG 401
AR +F+ MP + +VSW S+I GY + E +LF +M + G
Sbjct: 186 YNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMN-HCREAIKLFDEMVALG 244
Query: 402 LKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACAL 461
LKP V+I S L AC + + G+ IH Y R + D ++ ++D Y K G I A+
Sbjct: 245 LKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAM 304
Query: 462 NVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTA 521
+F ++K +W+ MI G ++HG G+L VD FR++ + P D + + L CS +
Sbjct: 305 EIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKP-DGVTFISVLVGCSHS 363
Query: 522 RMFEEGRVCFNHIRGPM-----IAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPE---- 572
+ +E R F+ +R + H LL R GL +EA + IEQ P+
Sbjct: 364 GLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEA-----AEMIEQMPKDGGN 418
Query: 573 -----VLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKI 627
LL GCRIHG + ++ ++ L P + Y +++ +A + + V K+
Sbjct: 419 REKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKV 478
Query: 628 RETIRERGLKPKK 640
RE I +R K KK
Sbjct: 479 REII-DRDKKVKK 490
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 156/353 (44%), Gaps = 50/353 (14%)
Query: 215 GSLRQGRDVHLIAVKLGLEGEVFASNSLLKMY------------VDCGSMRD-------- 254
G L + +H A++ GL ++F N+L+++Y D RD
Sbjct: 131 GDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLI 190
Query: 255 -----------ARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPD 303
AR +F+ MP +D+VSW S+I G Q EA++LF M GL KPD
Sbjct: 191 DGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGL--KPD 248
Query: 304 LVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFE 363
V + + L C G + G+ IH Y R + D L+ L+ YA CG A +FE
Sbjct: 249 NVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFE 308
Query: 364 QMPSKTVVSWTSMIRGYVKKGGFNNEV-FRLFRKMNSEGLKPTAVSISSILPACGRIASH 422
KT+ +W +MI G G N E+ FRKM S G+KP V+ S+L C
Sbjct: 309 LCSDKTLFTWNAMITGLAMHG--NGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLV 366
Query: 423 KHGREIHGYLLRNGVEFDINVS----NAVIDMYVKSGAIACALNVFGEM-----NEKDTI 473
R + + +D+N + D+ ++G I A + +M N + +
Sbjct: 367 DEARNLFDQMRS---LYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLL 423
Query: 474 SWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEE 526
+WS ++ GC +HG ++ +++ + +P D +Y + + A +EE
Sbjct: 424 AWSGLLGGCRIHGNIEIAEKAANRVK--ALSPEDGGVYKVMVEMYANAERWEE 474
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 188/441 (42%), Gaps = 54/441 (12%)
Query: 215 GSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMI 274
+ Q + +H +K L + L+ + G + A LVF ++ +W MI
Sbjct: 31 SNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMI 90
Query: 275 RGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNG 334
R N + EA+ LF M + S + D V+ C S++ G ++HG ++ G
Sbjct: 91 RSLSVNHKPREALLLFILMMISHQS-QFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAG 149
Query: 335 VECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGG-------FN 387
DV NTL+ +Y CG R VF++MP +++VSWT+M+ G V FN
Sbjct: 150 FFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFN 209
Query: 388 -----------------------NEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKH 424
+E F+LFR+M + +KP +I ++L A ++ S
Sbjct: 210 QMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSM 269
Query: 425 GREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSL 484
GR +H Y +NG D + A+IDMY K G++ A VF M K +W+ MI +
Sbjct: 270 GRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGV 329
Query: 485 HGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHI-----RGPMI 539
HG G+ + LF ++E + D + L AC+ ++G F + P+
Sbjct: 330 HGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIR 389
Query: 540 AHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEY--ALGKQVIEQL 597
H A + LL EQ +E E L+E ++ + G + + +
Sbjct: 390 EHNACMIQLL--------------EQALE--VEKASNLVESMDSDPDFNSSFGNEYTDGM 433
Query: 598 CELEPLNAENYVLLLNWHAGK 618
E +++ ++ W G+
Sbjct: 434 NETNETPSQHQIMFTKWDTGR 454
Score = 152 bits (384), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 160/348 (45%), Gaps = 36/348 (10%)
Query: 111 RLAADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWT 170
R ++FS KQ+HT +K L++ + LI + +S + A +F++ + W
Sbjct: 28 RTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWN 87
Query: 171 FLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGS-LRQGRDVHLIAVK 229
+ + + PR AL LF M+ + S +R G VH +A+K
Sbjct: 88 LMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIK 147
Query: 230 LGLEGEVFASNSLLKMYVDCG-------------------------------SMRDARLV 258
G +VF N+L+ +Y CG + A +V
Sbjct: 148 AGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIV 207
Query: 259 FEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIG 318
F +MP ++VVSWT+MI V+N EA +LFRRM ++ VKP+ + +L +G
Sbjct: 208 FNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVD--DVKPNEFTIVNLLQASTQLG 265
Query: 319 SLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIR 378
SL GR +H Y +NG D L L+ MY+ CG+ +DAR VF+ M K++ +W SMI
Sbjct: 266 SLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMIT 325
Query: 379 GYVKKGGFNNEVFRLFRKMNSEG-LKPTAVSISSILPACGRIASHKHG 425
+ G E LF +M E ++P A++ +L AC + K G
Sbjct: 326 S-LGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDG 372
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 3/191 (1%)
Query: 308 STVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPS 367
S L C LK +IH ++++ + D LL L+ + + G ++ A LVF Q+ S
Sbjct: 24 SYFLRTCSNFSQLK---QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQS 80
Query: 368 KTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGRE 427
+ +W MIR + M S + + ++ AC +S + G +
Sbjct: 81 PSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQ 140
Query: 428 IHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQ 487
+HG ++ G D+ N ++D+Y K G VF +M + +SW+ M++G + Q
Sbjct: 141 VHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQ 200
Query: 488 GKLGVDLFRQL 498
+F Q+
Sbjct: 201 LDSAEIVFNQM 211
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 206/500 (41%), Gaps = 72/500 (14%)
Query: 221 RDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQN 280
R +H K G SNSL++ Y S+ DA VF++MP DV+SW S++ G VQ+
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQS 134
Query: 281 GELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVE-CDV 339
G E + LF + L V P+ + L C + G IH LV+ G+E +V
Sbjct: 135 GRFQEGICLF--LELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNV 192
Query: 340 LLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTS------------------------ 375
++ N L+ MY CG DA LVF+ M K VSW +
Sbjct: 193 VVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNP 252
Query: 376 -------MIRGYVKKGGFNN------------------------------EVFRLFRKMN 398
+I +VK G FNN E F KM+
Sbjct: 253 DTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMH 312
Query: 399 SEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIA 458
S G++ S+S +L A +A G IH + G++ + V++A+IDMY K G +
Sbjct: 313 SSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLK 372
Query: 459 CALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHAC 518
A +F M K+ I W+ MI G + +G + LF QL++ D + L C
Sbjct: 373 HAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVC 432
Query: 519 STAR-----MFEEGRVCFNHIR-GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPE 572
S M + N R P + HC + + + G +A I+E
Sbjct: 433 SHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGV 492
Query: 573 VLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAEN--YVLLLNWHAGKGKLDMVDKIRET 630
R LL C + K V ++ EL + + Y+++ N +A + V +IR+
Sbjct: 493 AWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKI 552
Query: 631 IRERGLKPKKACTWTLYREK 650
+RE G+ + +W R K
Sbjct: 553 MRESGVLKEVGSSWIDSRTK 572
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 128/234 (54%), Gaps = 11/234 (4%)
Query: 269 SWTSMIRGCVQNGE---LSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGRE 325
SW++++ + G L A+EL KPD + +L V G G + R+
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELIND------GEKPDASPLVHLLRVSGNYGYVSLCRQ 76
Query: 326 IHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGG 385
+HGY+ ++G + LSN+L++ Y + DA VF++MP V+SW S++ GYV+ G
Sbjct: 77 LHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGR 136
Query: 386 FNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVE-FDINVS 444
F E LF +++ + P S ++ L AC R+ G IH L++ G+E ++ V
Sbjct: 137 F-QEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVG 195
Query: 445 NAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQL 498
N +IDMY K G + A+ VF M EKDT+SW+ ++ CS +G+ +LG+ F Q+
Sbjct: 196 NCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM 249
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 111/233 (47%), Gaps = 13/233 (5%)
Query: 372 SWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGY 431
SW++++ + G V R ++ ++G KP A + +L G R++HGY
Sbjct: 23 SWSTIVPALARFGSIG--VLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGY 80
Query: 432 LLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLG 491
+ ++G + +SN+++ Y S ++ A VF EM + D ISW+ ++ G G+ + G
Sbjct: 81 VTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEG 140
Query: 492 VDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHI------RGP-MIAHCAQ 544
+ LF +L R+ P ++ + AAL AC+ + G + + +G ++ +C
Sbjct: 141 ICLFLELHRSDVFP-NEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCL- 198
Query: 545 KVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQL 597
+ + +CG D+A V + + E+ ++ C +G+ LG Q+
Sbjct: 199 -IDMYGKCGFMDDA-VLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM 249
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 2/160 (1%)
Query: 155 QTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMM 214
Q L D P S W + YV A E F +M +
Sbjct: 275 QVLSDMPNP-NSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAAL 333
Query: 215 GSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMI 274
+ G +H A KLGL+ V +++L+ MY CG ++ A L+F MP K+++ W MI
Sbjct: 334 AVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMI 393
Query: 275 RGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVC 314
G +NG+ EA++LF ++ E +KPD +L VC
Sbjct: 394 SGYARNGDSIEAIKLFNQLKQERF-LKPDRFTFLNLLAVC 432
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 174/368 (47%), Gaps = 39/368 (10%)
Query: 323 GREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVK 382
G+ HG +++G + + + N+L+ MY CGA A+ +F ++P + +VSW S+I G V+
Sbjct: 137 GKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVR 196
Query: 383 KG----------------------------GFNNE--VFRLFRKMNSEGLKPTAVSISSI 412
G G NN LFR+M G + ++ +
Sbjct: 197 NGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLL 256
Query: 413 LPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDT 472
L ACGR A K GR +H L+R + + + A+IDMY K + A +F ++ ++
Sbjct: 257 LNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNK 316
Query: 473 ISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFN 532
++W++MI LHG+ + G++LF + P D+ + L C+ A + +G+ ++
Sbjct: 317 VTWNVMILAHCLHGRPEGGLELFEAMINGMLRP-DEVTFVGVLCGCARAGLVSQGQSYYS 375
Query: 533 HIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQ-HPEVLR--KLLEGCRIH 584
+ P H +L + G +EA ++ E PE + LL R
Sbjct: 376 LMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFT 435
Query: 585 GEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTW 644
G LG+ + + L E +PLN + Y LL+N ++ G+ + V+++RE ++ER + C
Sbjct: 436 GNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGL 495
Query: 645 TLYREKVH 652
+E VH
Sbjct: 496 VDLKEIVH 503
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 89/216 (41%), Gaps = 1/216 (0%)
Query: 54 HQVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLA 113
H++FD+ P+ + ++WN +I +L N+ ++IS F +M+R A +
Sbjct: 204 HKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRS 263
Query: 114 ADFSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLA 173
A G+ +H ++ L+S ALI +Y ++ +A+ +FD + W +
Sbjct: 264 ARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMI 323
Query: 174 KLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAV-KLGL 232
+ L G P LELF M+ G + QG+ + + V + +
Sbjct: 324 LAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQI 383
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVV 268
+ + +Y G +A + +P +DV
Sbjct: 384 KPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVT 419
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 89/223 (39%), Gaps = 3/223 (1%)
Query: 150 DIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXX 209
D+ A LFD+ W + Y+ P ++ LF MV
Sbjct: 199 DVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLN 258
Query: 210 XXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVS 269
L++GR VH ++ L V +L+ MY C + AR +F+ + ++ V+
Sbjct: 259 ACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVT 318
Query: 270 WTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGY 329
W MI +G +ELF M + G+ ++PD V VL C G + G+ +
Sbjct: 319 WNVMILAHCLHGRPEGGLELFEAM-INGM-LRPDEVTFVGVLCGCARAGLVSQGQSYYSL 376
Query: 330 LVRN-GVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVV 371
+V ++ + + +Y+ G +A + +P + V
Sbjct: 377 MVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVT 419
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 171/364 (46%), Gaps = 19/364 (5%)
Query: 416 CGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISW 475
CG + + +HG + + D++ ++ +++MY G A +VF +M+EK+ +W
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETW 323
Query: 476 SMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR 535
++I + +G G+ +D+F + + P D ++ +AC +EG + F +
Sbjct: 324 CIIIRCFAKNGFGEDAIDMFSRFKEEGNIP-DGQLFRGIFYACGMLGDVDEGLLHFESMS 382
Query: 536 -----GPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALG 590
P I V + A G DEA+ F+ +E + +V L+ R+HG LG
Sbjct: 383 RDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELG 442
Query: 591 KQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREK 650
E + L+P LN + +G + ++ + E+ K++ +
Sbjct: 443 DYCAEVVEFLDPTR-------LNKQSREGFI----PVKASDVEKESLKKRSGILHGVKSS 491
Query: 651 VHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEE-RECTQIEHSELL 709
+ F GD + P E+ L+ M G + +LHD+D+E +E + HSE +
Sbjct: 492 MQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSERI 551
Query: 710 ALAFGLISSQA-GPIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTC 768
A A +++S P + KN RVC CH+ K +S + GRE+I +D FH K+G CTC
Sbjct: 552 AFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTC 611
Query: 769 EDFW 772
+D+W
Sbjct: 612 KDYW 615
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 3/191 (1%)
Query: 303 DLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVF 362
DL + + +CG L+ + +HG + + D+ ++ LL+MY++CG + +A VF
Sbjct: 253 DLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVF 312
Query: 363 EQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASH 422
E+M K + +W +IR + K GF + +F + EG P I ACG +
Sbjct: 313 EKMSEKNLETWCIIIRCFA-KNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDV 371
Query: 423 KHGREIHGYLLRN-GVEFDINVSNAVIDMYVKSGAIACALNVFGEMN-EKDTISWSMMIF 480
G + R+ G+ I ++++MY G + AL M E + W ++
Sbjct: 372 DEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMN 431
Query: 481 GCSLHGQGKLG 491
+HG +LG
Sbjct: 432 LSRVHGNLELG 442
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 14/179 (7%)
Query: 242 LLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVK 301
LL+MY +CG +A VFEKM K++ +W +IR +NG +A+++F R EG
Sbjct: 295 LLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEG--NI 352
Query: 302 PDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN-GVECDVLLSNTLLKMYADCGASRDARL 360
PD + + CGM+G + G + R+ G+ + +L++MYA G +A
Sbjct: 353 PDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALE 412
Query: 361 VFEQMPSKTVVS-WTSM-----IRGYVKKGGFNNEVFRL-----FRKMNSEGLKPTAVS 408
E+MP + V W ++ + G ++ G + EV K + EG P S
Sbjct: 413 FVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREGFIPVKAS 471
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 154/314 (49%), Gaps = 15/314 (4%)
Query: 332 RNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVF 391
RN V +V+++ + G A E+MP++TVVSWT++I GY + +
Sbjct: 187 RNPVTWNVMITGL-----TNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAIL 241
Query: 392 RLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNG-VEFDINVSNAVIDM 450
R + + +KP ++I +ILPA + K +H Y+ + G V DI V+N++ID
Sbjct: 242 LFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDA 301
Query: 451 YVKSGAIACALNVFGEM--NEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDD 508
Y K G I A F E+ K+ +SW+ MI ++HG GK V +F+ +ER P +
Sbjct: 302 YAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKP-NR 360
Query: 509 NIYAAALHACSTARMFEEGRVCF------NHIRGPMIAHCAQKVSLLARCGLFDEAMVFI 562
+ L+ACS + EE + F + P + H V +L R G +EA
Sbjct: 361 VTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIA 420
Query: 563 REQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLD 622
E IE+ V R LL C ++ + L ++V +L ELE + +YVL+ N G G+
Sbjct: 421 LEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFL 480
Query: 623 MVDKIRETIRERGL 636
+ R+ + RG+
Sbjct: 481 DAQRFRKQMDVRGV 494
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 159/337 (47%), Gaps = 40/337 (11%)
Query: 229 KLGLEGEVFASNSLLKMYVDCGSMRDARLVF----------------------------- 259
KLG E V+ +L+ MY+ G+M DA VF
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 260 --EKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMI 317
EKMP + VVSWT++I G + + EA+ LF RM + ++KP+ + + +LP +
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRM-VACDAIKPNEITILAILPAVWNL 269
Query: 318 GSLKHGREIHGYLVRNG-VECDVLLSNTLLKMYADCGASRDARLVFEQMPS--KTVVSWT 374
G LK +H Y+ + G V CD+ ++N+L+ YA CG + A F ++P+ K +VSWT
Sbjct: 270 GDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWT 329
Query: 375 SMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPAC--GRIASHKHGREIHGYL 432
+MI + G E +F+ M GLKP V++ S+L AC G +A + + +
Sbjct: 330 TMISAFAIH-GMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMV 388
Query: 433 LRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMN-EKDTISWSMMIFGCSLHGQGKLG 491
+ D+ ++DM + G + A + E+ E+ + W M++ CS++ +L
Sbjct: 389 NEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELA 448
Query: 492 VDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGR 528
+ R+L + D + + + C T R + R
Sbjct: 449 ERVTRKLMELERSHGGDYVLMSNIF-CGTGRFLDAQR 484
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 88/222 (39%), Gaps = 37/222 (16%)
Query: 128 KLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWT----------------- 170
KL S + AL+ +Y ++ A +FD+ W
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 171 FLAKL--------------YVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXM-MG 215
FL K+ Y P+ A+ LF RMV +G
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 216 SLRQGRDVHLIAVKLG-LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPC--KDVVSWTS 272
L+ VH K G + ++ +NSL+ Y CG ++ A F ++P K++VSWT+
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 273 MIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVC 314
MI +G EA+ +F+ M E L +KP+ V + +VL C
Sbjct: 331 MISAFAIHGMGKEAVSMFKDM--ERLGLKPNRVTMISVLNAC 370
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 178/380 (46%), Gaps = 37/380 (9%)
Query: 400 EGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIAC 459
+G P + +C + S +H +++H + L++ D ++N VI M+ + +I
Sbjct: 230 KGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITD 289
Query: 460 ALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACS 519
A VF M +KD SW +M+ S +G G + LF ++ ++ P ++ L AC+
Sbjct: 290 AKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL-ACA 348
Query: 520 TARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVL 574
T EE + F+ ++ P H + +L +CG EA +IR+ E +
Sbjct: 349 TVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFW 408
Query: 575 RKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRER 634
+ R+HG+ L + E + +++P A + + +MV + R
Sbjct: 409 EAMRNYARLHGDIDLEDYMEELMVDVDPSKAVINKIPTPPPKSFKETNMVTSKSRILEFR 468
Query: 635 GLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDV 694
L T Y+++ KE+ +A +G + P F LHD+
Sbjct: 469 NL--------TFYKDEA-------------KEM-AAKKGVV-------YVPDTRFVLHDI 499
Query: 695 DEE-RECTQIEHSELLALAFGLI-SSQAGPIRLEKNSRVCRGCHDFAKFVSKVTGREIIL 752
D+E +E + HSE LA+A+G+I + + + KN RVC CH+F K +SK+ GR +I+
Sbjct: 500 DQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIV 559
Query: 753 KDPNFFHHFKHGHCTCEDFW 772
+D FHHFK G C+C D+W
Sbjct: 560 RDNKRFHHFKDGKCSCGDYW 579
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 302 PDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLV 361
PD + C + SL+H +++H + +++ D L+N ++ M+ +C + DA+ V
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRV 293
Query: 362 FEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIA 420
F+ M K + SW M+ Y G ++ LF +M GLKP + ++ AC +
Sbjct: 294 FDHMVDKDMDSWHLMMCAY-SDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVG 351
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 5/174 (2%)
Query: 214 MGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSM 273
+ SL + VH ++ G+ +N ++ M+ +C S+ DA+ VF+ M KD+ SW M
Sbjct: 249 LKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLM 308
Query: 274 IRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN 333
+ NG +A+ LF M GL KP+ TV C +G ++ +H ++N
Sbjct: 309 MCAYSDNGMGDDALHLFEEMTKHGL--KPNEETFLTVFLACATVGGIEEAF-LHFDSMKN 365
Query: 334 --GVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGG 385
G+ +L + CG +A +P + + +R Y + G
Sbjct: 366 EHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHG 419
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 194/433 (44%), Gaps = 10/433 (2%)
Query: 217 LRQGRDVHLIAVKLGLEG-EVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIR 275
+R G +H A+ G+ + NS++ MY G A VF M +DVVSW +I
Sbjct: 149 VRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLIL 208
Query: 276 GCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGV 335
C +G A++ F M + ++PD VS V+ +C + L G++ ++ G
Sbjct: 209 SCSDSGNKEVALDQFWLM--REMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGF 266
Query: 336 ECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFR 395
+ ++ + M++ C D+ +F ++ V SMI Y + RLF
Sbjct: 267 LSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSY-SWHCCGEDALRLFI 325
Query: 396 KMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSG 455
++ ++P + SS+L + + HG ++H +++ G + D V+ ++++MY K+G
Sbjct: 326 LAMTQSVRPDKFTFSSVLSSMNAVM-LDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTG 384
Query: 456 AIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAAL 515
++ A+ VF + + KD I W+ +I G + + + + +F QL N D L
Sbjct: 385 SVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGIL 444
Query: 516 HACSTARMFEEGRVCFN-----HIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQH 570
AC A EG F+ H P H A + LL R G+ +EA + E
Sbjct: 445 VACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPS 504
Query: 571 PEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRET 630
+ +L G+ L + V + + E EP ++ Y++L+ + + + K+R
Sbjct: 505 SHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYA 564
Query: 631 IRERGLKPKKACT 643
+ E LK + +
Sbjct: 565 MNEHKLKSAQGSS 577
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 137/293 (46%), Gaps = 17/293 (5%)
Query: 240 NSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLS 299
N LK G + +A +F++MP +DVVSW +MI G V G + +F +++
Sbjct: 74 NVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVF--FDMQRWE 131
Query: 300 VKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVE-CDVLLSNTLLKMYADCGASRDA 358
++P S + ++ ++HG +IHG + +GV ++++ N+++ MY G A
Sbjct: 132 IRPTEFTFSI---LASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYA 188
Query: 359 RLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEV----FRLFRKMNSEGLKPTAVSISSILP 414
VF M + VVSW +I G N EV F L R+M ++P ++S ++
Sbjct: 189 LSVFLTMEDRDVVSWNCLILSCSDSG--NKEVALDQFWLMREME---IQPDEYTVSMVVS 243
Query: 415 ACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTIS 474
C + G++ ++ G + V A IDM+ K + ++ +F E+ + D++
Sbjct: 244 ICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVL 303
Query: 475 WSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEG 527
+ MI S H G+ + LF S P D +++ + A M + G
Sbjct: 304 CNSMIGSYSWHCCGEDALRLFILAMTQSVRP--DKFTFSSVLSSMNAVMLDHG 354
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 152/376 (40%), Gaps = 9/376 (2%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
+FD+ PE D ++WNT+I +S I F M R + + L
Sbjct: 91 DLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSIL---ASLVT 147
Query: 115 DFSLGKQLHTHAVKLALSSRAHTLI--ALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFL 172
G+Q+H +A+ + SR + ++ +++ +Y L A ++F W L
Sbjct: 148 CVRHGEQIHGNAICSGV-SRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCL 206
Query: 173 AKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGL 232
G AL+ F M + L +G+ + +K+G
Sbjct: 207 ILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGF 266
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
+ + M+ C + D+ +F ++ D V SMI + +A+ LF
Sbjct: 267 LSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFIL 326
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADC 352
+ SV+PD S+VL + L HG ++H +++ G + D ++ +L++MY
Sbjct: 327 AMTQ--SVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKT 383
Query: 353 GASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSI 412
G+ A VF + K ++ W ++I G + + + + ++ LKP V++ I
Sbjct: 384 GSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGI 443
Query: 413 LPACGRIASHKHGREI 428
L AC G +I
Sbjct: 444 LVACCYAGFVNEGIQI 459
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 155/344 (45%), Gaps = 37/344 (10%)
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
E +V + ++ + + +AR F++MP K VVSW +M+ G QNG +A+ LF
Sbjct: 195 ENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFND 254
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADC 352
M L V+P+ V+ C R + + V + + LL M+A C
Sbjct: 255 M--LRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKC 312
Query: 353 -------------GASRD-------------------ARLVFEQMPSKTVVSWTSMIRGY 380
G R+ AR +F+ MP + VVSW S+I GY
Sbjct: 313 RDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGY 372
Query: 381 VKKGGFNNEVFRLFRKMNSEG-LKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEF 439
G + F M G KP V++ S+L ACG +A + G I Y+ +N ++
Sbjct: 373 AHNGQAALAI-EFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKL 431
Query: 440 DINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLE 499
+ + ++I MY + G + A VF EM E+D +S++ + + +G G ++L +++
Sbjct: 432 NDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMK 491
Query: 500 RNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRGPMIAHCA 543
P D Y + L AC+ A + +EG+ F IR P+ H A
Sbjct: 492 DEGIEP-DRVTYTSVLTACNRAGLLKEGQRIFKSIRNPLADHYA 534
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 112/216 (51%), Gaps = 2/216 (0%)
Query: 213 MMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTS 272
M R + I +LG + + N+++ Y G M AR +F+ MP ++VVSW S
Sbjct: 308 MHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNS 367
Query: 273 MIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVR 332
+I G NG+ + A+E F M G S KPD V + +VL CG + L+ G I Y+ +
Sbjct: 368 LIAGYAHNGQAALAIEFFEDMIDYGDS-KPDEVTMISVLSACGHMADLELGDCIVDYIRK 426
Query: 333 NGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFR 392
N ++ + +L+ MYA G +A+ VF++M + VVS+ ++ + G E
Sbjct: 427 NQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGD-GVETLN 485
Query: 393 LFRKMNSEGLKPTAVSISSILPACGRIASHKHGREI 428
L KM EG++P V+ +S+L AC R K G+ I
Sbjct: 486 LLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRI 521
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 117/292 (40%), Gaps = 19/292 (6%)
Query: 358 ARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACG 417
RL+F+ + V SM + Y K N+V RL+ + + G+ P A S ++ + G
Sbjct: 59 TRLIFDSVTFPNVFVVNSMFK-YFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG 117
Query: 418 RIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSM 477
R G + + G D V N ++DMYVK ++ A VF +++++ W++
Sbjct: 118 RF-----GILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNV 172
Query: 478 MIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRGP 537
MI G G + LF + N D + + + + E R F+ +
Sbjct: 173 MISGYWKWGNKEEACKLFDMMPEN-----DVVSWTVMITGFAKVKDLENARKYFDRMPEK 227
Query: 538 MIAHCAQKVSLLARCGLFDEAMVFIREQ---KIEQHPEVLRKLLEGCRIHGEYALGKQVI 594
+ +S A+ G ++A+ + + + ++ C + +L + ++
Sbjct: 228 SVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLV 287
Query: 595 EQLCELE-PLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWT 645
+ + E LN LL+ HA K + R E G + + TW
Sbjct: 288 KLIDEKRVRLNCFVKTALLDMHA---KCRDIQSARRIFNELGTQ-RNLVTWN 335
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 186/413 (45%), Gaps = 45/413 (10%)
Query: 270 WTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGY 329
+ ++IR + GE ++ LF M V+P+ + +++ S+ +G +HG
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLAS--HVQPNNLTFPSLIKAACSSFSVSYGVALHGQ 111
Query: 330 LVRNGVECDVLLSNTLLKMYADCGASRDARLVF--------------------------- 362
++ G D + + ++ Y + G +R +F
Sbjct: 112 ALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYA 171
Query: 363 ----EQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKM--NSEG-LKPTAVSISSILPA 415
++MP VVSWT++I G+ KKG + + +F +M N + P + S+L +
Sbjct: 172 FEYFQRMPVTDVVSWTTVINGFSKKG-LHAKALMVFGEMIQNERAVITPNEATFVSVLSS 230
Query: 416 CGRI--ASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTI 473
C + G++IHGY++ + + A++DMY K+G + AL +F ++ +K
Sbjct: 231 CANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVC 290
Query: 474 SWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEG-----R 528
+W+ +I + +G+ K +++F ++ + P + A L AC+ +++ + G
Sbjct: 291 AWNAIISALASNGRPKQALEMFEMMKSSYVHP-NGITLLAILTACARSKLVDLGIQLFSS 349
Query: 529 VCFNHIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYA 588
+C + P H V L+ R GL +A FI+ E VL LL C+IH
Sbjct: 350 ICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTE 409
Query: 589 LGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKA 641
LG V +QL L+P + YV L ++A +K+R+ + E G++ A
Sbjct: 410 LGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPA 462
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 152/371 (40%), Gaps = 47/371 (12%)
Query: 169 WTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAV 228
+ L + Y+ G +++L LF M+ S+ G +H A+
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 229 KLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKM--PCKDVVSWTSMIRGCVQNGELSEA 286
K G + F S ++ Y + G + +R +F+ + PC VV+ S++ C +NGE+ A
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPC--VVACNSLLDACGRNGEMDYA 171
Query: 287 MELFRRMN----------LEGLS----------------------VKPDLVMVSTVLPVC 314
E F+RM + G S + P+ +VL C
Sbjct: 172 FEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSC 231
Query: 315 GMI--GSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVS 372
G ++ G++IHGY++ + L LL MY G A +F+Q+ K V +
Sbjct: 232 ANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCA 291
Query: 373 WTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYL 432
W ++I + G + +F M S + P +++ +IL AC R G ++ +
Sbjct: 292 WNAIISA-LASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSI 350
Query: 433 LRNGVEFDINVSN----AVIDMYVKSGAIACALNVFGEMN-EKDTISWSMMIFGCSLHGQ 487
E+ I ++ V+D+ ++G + A N + E D ++ C +H
Sbjct: 351 CS---EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHEN 407
Query: 488 GKLGVDLFRQL 498
+LG + +QL
Sbjct: 408 TELGNTVGKQL 418
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 171/368 (46%), Gaps = 31/368 (8%)
Query: 416 CGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISW 475
CG + + + R +H + D + VI+MY + ALNVF EM ++++ +W
Sbjct: 122 CGEVEALEEARVVHDCI----TPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETW 177
Query: 476 SMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR 535
MI + +G+G+ +D+F + P D I+ A AC + EG + F +
Sbjct: 178 GTMIRCLAKNGEGERAIDMFTRFIEEGNKP-DKEIFKAVFFACVSIGDINEGLLHFESMY 236
Query: 536 GPM-----IAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALG 590
+ + +LA CG DEA+ F+ +E E+ L+ C + G LG
Sbjct: 237 RDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELG 296
Query: 591 KQVIEQLCELEP--LNAENYVLLLNWHAGKGKLDMVDKIR--ETIRERGLKPKKACTWTL 646
+ E + +L+ ++ E+ L+ A ++ + ++R + IR+ PKK
Sbjct: 297 DRFAELIKKLDASRMSKESNAGLVAAKASDSAMEKLKELRYCQMIRD---DPKK------ 347
Query: 647 YREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEPKWDFSLHDVDEERECTQIE-H 705
++H F GD SH SA + +M G P V+EE + Q+
Sbjct: 348 ---RMHEFRAGDTSHL---GTVSAFRSLKVQMLDIGFVPATRVCFVTVEEEEKEEQLLFR 401
Query: 706 SELLALAFGLISSQAG-PIRLEKNSRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHG 764
S LA A +I+S+A P+ + +N R C H+ K +S +TGR +I +D +H +K+G
Sbjct: 402 SNKLAFAHAIINSEARRPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNG 461
Query: 765 HCTCEDFW 772
C+C+D+W
Sbjct: 462 VCSCKDYW 469
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 119/283 (42%), Gaps = 23/283 (8%)
Query: 264 CKDVVSWTSMIR-----------GCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLP 312
C+ V S+ M+ + ++ EA+E+ + +G V D + +
Sbjct: 63 CRRVSSYAQMVNNHQSVTIETFDALCKQVKIREALEVIDILEDKGYIV--DFPRLLGLAK 120
Query: 313 VCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVS 372
+CG + +L+ R +H + D +T+++MY+ C ++ DA VF +MP + +
Sbjct: 121 LCGEVEALEEARVVHDCIT----PLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSET 176
Query: 373 WTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYL 432
W +MIR K G +F + EG KP ++ AC I G +
Sbjct: 177 WGTMIRCLAKNGE-GERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESM 235
Query: 433 LRN-GVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTIS-WSMMIFGCSLHGQGKL 490
R+ G+ + VI+M G + AL+ M + ++ W ++ C + G +L
Sbjct: 236 YRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLEL 295
Query: 491 G---VDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVC 530
G +L ++L+ + + + AA + S +E R C
Sbjct: 296 GDRFAELIKKLDASRMSKESNAGLVAAKASDSAMEKLKELRYC 338
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 13/176 (7%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIR 275
+L + R VH L + + +++++MY C S DA VF +MP ++ +W +MIR
Sbjct: 127 ALEEARVVHDCITPL----DARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIR 182
Query: 276 GCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN-G 334
+NGE A+++F R EG KPD + V C IG + G + R+ G
Sbjct: 183 CLAKNGEGERAIDMFTRFIEEG--NKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYG 240
Query: 335 VECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVS-WTSM-----IRGYVKKG 384
+ + +++M A CG +A E+M + V W ++ ++GY++ G
Sbjct: 241 MVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELG 296
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 134/267 (50%), Gaps = 9/267 (3%)
Query: 240 NSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM---NLE 296
N LL M+V CG + R +F++MP +D SW + GC++ G+ +A LF M + +
Sbjct: 127 NRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQK 186
Query: 297 GLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGV--ECDVLLSNTLLKMYADCGA 354
G P ++ VL C MI + G+++H + G E D LS +L++ Y +
Sbjct: 187 GAFKIPSWIL-GCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRC 245
Query: 355 SRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILP 414
DA LV Q+ + V+W + + ++G F EV R F +M + G+K S++L
Sbjct: 246 LEDANLVLHQLSNANTVAWAAKVTNDYREGEF-QEVIRDFIEMGNHGIKKNVSVFSNVLK 304
Query: 415 ACGRIAS-HKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTI 473
AC ++ + G+++H ++ G E D + +I+MY K G + A VF ++ ++
Sbjct: 305 ACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSV 364
Query: 474 S-WSMMIFGCSLHGQGKLGVDLFRQLE 499
S W+ M+ +G + L Q++
Sbjct: 365 SCWNAMVASYMQNGIYIEAIKLLYQMK 391
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 7/196 (3%)
Query: 213 MMGSLRQGRDVHLIAVKLGL--EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSW 270
M+ G+ VH + KLG E + + S SL++ Y + + DA LV ++ + V+W
Sbjct: 205 MIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAW 264
Query: 271 TSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSL-KHGREIHGY 329
+ + + GE E + F M G +K ++ + S VL C + + G+++H
Sbjct: 265 AAKVTNDYREGEFQEVIRDFIEMGNHG--IKKNVSVFSNVLKACSWVSDGGRSGQQVHAN 322
Query: 330 LVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVS-WTSMIRGYVKKGGFNN 388
++ G E D L+ L++MY G +DA VF+ +T VS W +M+ Y++ G +
Sbjct: 323 AIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIY-I 381
Query: 389 EVFRLFRKMNSEGLKP 404
E +L +M + G+K
Sbjct: 382 EAIKLLYQMKATGIKA 397
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 98/259 (37%), Gaps = 8/259 (3%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRH----AVXXXXXXXXXXXXAS 110
Q+FD+ P D +W + + + A F ML+H A A
Sbjct: 144 QMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKAC 203
Query: 111 RLAADFSLGKQLHTHAVKLALSSRAHTLIA--LIHLYASLDDIAVAQTLFDKTAPFGSDC 168
+ DF LGKQ+H KL + ++ LI Y + A + + + +
Sbjct: 204 AMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVA 263
Query: 169 WTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSL-RQGRDVHLIA 227
W EG + + F M + R G+ VH A
Sbjct: 264 WAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANA 323
Query: 228 VKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVS-WTSMIRGCVQNGELSEA 286
+KLG E + L++MY G ++DA VF+ + VS W +M+ +QNG EA
Sbjct: 324 IKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEA 383
Query: 287 MELFRRMNLEGLSVKPDLV 305
++L +M G+ L+
Sbjct: 384 IKLLYQMKATGIKAHDTLL 402
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 163/391 (41%), Gaps = 24/391 (6%)
Query: 389 EVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVI 448
E + + ++G + + + CG+ + + R +H ++ D+ NA+I
Sbjct: 102 EAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAII 161
Query: 449 DMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDD 508
+MY ++ AL VF EM E ++ + +M+ +G G+ +DLF + + P +
Sbjct: 162 EMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKP-NG 220
Query: 509 NIYAAALHACSTARMFEEGRVCFNHIRG-----PMIAHCAQKVSLLARCGLFDEAMVFIR 563
I+ C+ +EG + F + P + H +LA G DEA+ F+
Sbjct: 221 EIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVE 280
Query: 564 EQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDM 623
+E +V L+ R+HG+ LG + E + +L+ + AG
Sbjct: 281 RMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDATRLDKVS-----SAGLVATKA 335
Query: 624 VDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGV 683
D +++ R +P T F D SHP+ I L +++ G
Sbjct: 336 SDFVKKEPSTRS-EPYFYST----------FRPVDSSHPQMNIIYETLMSLRSQLKEMGY 384
Query: 684 EP--KWDFSLHDVDEERECTQIEHSELLALAFGLISSQAGPIRLEKNSRVCRGCHDFAKF 741
P ++ SL E +E E+ + L S I L N R+ CHD K
Sbjct: 385 VPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIVGDCHDMMKL 444
Query: 742 VSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
+S +TGR++I +D +H FK+G C C + W
Sbjct: 445 MSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 109/243 (44%), Gaps = 7/243 (2%)
Query: 277 CVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVE 336
C+Q G EA+E+ + +G ++ DL+ + + +CG +L+ R +H ++
Sbjct: 95 CIQ-GNWREAVEVLDYLENKGYAM--DLIRLLGLAKLCGKPEALEAARVVHECIIALVSP 151
Query: 337 CDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRK 396
CDV N +++MY+ C + DA VFE+MP + M+R +V G+ E LF +
Sbjct: 152 CDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFV-NNGYGEEAIDLFTR 210
Query: 397 MNSEGLKPTAVSISSILPACGRIASHKHGR-EIHGYLLRNGVEFDINVSNAVIDMYVKSG 455
EG KP + + C K G + G+ + ++V M SG
Sbjct: 211 FKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSG 270
Query: 456 AIACALNVFGEMNEKDTIS-WSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAA 514
+ ALN M + ++ W ++ +HG +LG D +L +A D + +A
Sbjct: 271 HLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELG-DRCAELVEKLDATRLDKVSSAG 329
Query: 515 LHA 517
L A
Sbjct: 330 LVA 332
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 4/164 (2%)
Query: 216 SLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVSWTSMIR 275
+L R VH + L +V A N++++MY C S+ DA VFE+MP + + M+R
Sbjct: 134 ALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMR 193
Query: 276 GCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGR-EIHGYLVRNG 334
V NG EA++LF R EG KP+ + + V C + G +K G + G
Sbjct: 194 CFVNNGYGEEAIDLFTRFKEEG--NKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYG 251
Query: 335 VECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVS-WTSMI 377
+ + +++ KM A G +A E+MP + V W +++
Sbjct: 252 IVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLM 295
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 70/104 (67%), Gaps = 2/104 (1%)
Query: 671 LQGFMEEMRTEGVEPKWDFSLHDVDEE-RECTQIEHSELLALAFGLISSQAGP-IRLEKN 728
L+ +E+R G P+ + LHD+DEE +E + HSE LA+AFG+I++ G IR+ KN
Sbjct: 136 LKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRVMKN 195
Query: 729 SRVCRGCHDFAKFVSKVTGREIILKDPNFFHHFKHGHCTCEDFW 772
R+C CH+F K +S + REII++D FHHF+ G+C+C D+W
Sbjct: 196 LRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 134/294 (45%), Gaps = 18/294 (6%)
Query: 251 SMRDARLVFEKMPCK-DVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVST 309
SMR+ R C+ DVV++TS++ GE+ +F M EGL KP++V +
Sbjct: 176 SMREKR-----AECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGL--KPNIVSYNA 228
Query: 310 VLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK- 368
++ + G + G + +NG+ DV+ LL Y A+ VF M +
Sbjct: 229 LMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKER 288
Query: 369 ---TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHG 425
VV++ ++I Y GF E +FR+M +G+KP VS+ ++L AC R +
Sbjct: 289 RKPNVVTYNALIDAY-GSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNV 347
Query: 426 REIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK----DTISWSMMIFG 481
+ G+ + N+ I Y+ + + A+ ++ M +K D+++++++I G
Sbjct: 348 DTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISG 407
Query: 482 CSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR 535
+ + +++E S PL +Y++ L A S E FN ++
Sbjct: 408 SCRMSKYPEAISYLKEMEDLS-IPLTKEVYSSVLCAYSKQGQVTEAESIFNQMK 460
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 104/506 (20%), Positives = 207/506 (40%), Gaps = 79/506 (15%)
Query: 240 NSLLKMYVDCGSMRDARLVF---EKMPCK-DVVSWTSMIRGCVQNGELSEAMELFRRMNL 295
N +++++ + AR +F +K CK D ++ ++I + G+ AM L M L
Sbjct: 15 NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM-L 73
Query: 296 EGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMY------ 349
++ P + ++ CG G+ + E+ + NGV D++ N +L Y
Sbjct: 74 RA-AIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 350 -----------------------------ADCGASRDARLVFEQMPSK------TVVSWT 374
+ G S A +F M K VV++T
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 375 SMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLR 434
S++ Y KG N +F M +EGLKP VS ++++ A + G + +
Sbjct: 193 SIMHLYSVKGEIEN-CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 251
Query: 435 NGVEFDINVSNAVIDMYVKSGAIACALNVF----GEMNEKDTISWSMMIFGCSLHGQGKL 490
NG+ D+ +++ Y +S A VF E + + ++++ +I +G
Sbjct: 252 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 311
Query: 491 GVDLFRQLERNSEAPLDDNIYAAA--LHACSTA--RMFEEGRVCFNHIRGPMIAHCAQKV 546
V++FRQ+E++ P N+ + L ACS + ++ + + RG + A
Sbjct: 312 AVEIFRQMEQDGIKP---NVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNS 368
Query: 547 SL--LARCGLFDEAMVF---IREQKIEQHPEVLRKLLEG-CRIHGEYALGKQVIEQLCEL 600
++ ++A+ +R++K++ L+ G CR+ +Y ++++ +L
Sbjct: 369 AIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM-SKYPEAISYLKEMEDL 427
Query: 601 E-PLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDV 659
PL E Y +L ++ +G++ + I ++ G +P Y +H + +
Sbjct: 428 SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIA----YTSMLHAYNASE- 482
Query: 660 SHPRKKEICSALQGFMEEMRTEGVEP 685
+ A + F+ EM G+EP
Sbjct: 483 ------KWGKACELFL-EMEANGIEP 501
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 102/242 (42%), Gaps = 11/242 (4%)
Query: 231 GLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCK----DVVSWTSMIRGCVQNGELSEA 286
G+ A NS + Y++ + A +++ M K D V++T +I G + + EA
Sbjct: 358 GINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEA 417
Query: 287 MELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLL 346
+ + M E LS+ + S+VL G + I + G E DV+ ++L
Sbjct: 418 ISYLKEM--EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML 475
Query: 347 KMYADCGASRDARLVFEQMPSKTV----VSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGL 402
Y A +F +M + + ++ ++++R + KGG + VF L M + +
Sbjct: 476 HAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF-NKGGQPSNVFVLMDLMREKEI 534
Query: 403 KPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALN 462
T I AC + K ++ + I ++N ++ ++ KSG + +
Sbjct: 535 PFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMK 594
Query: 463 VF 464
+F
Sbjct: 595 LF 596
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 103/496 (20%), Positives = 195/496 (39%), Gaps = 56/496 (11%)
Query: 64 DTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAADF----SLG 119
D ++ LI+ H + A++ MLR A+ A + ++ +
Sbjct: 45 DAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVC 104
Query: 120 KQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFD--KTAPFGSDCWTFLAKLYV 177
K++ + V L + H ++ + Y S + A + F+ K A D TF +Y
Sbjct: 105 KKMTDNGVGPDLVT--HNIV--LSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYC 160
Query: 178 LE--GMPRSALELFHRMVXXXXX--XXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
L G AL+LF+ M + G + R V V GL+
Sbjct: 161 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 220
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMP----CKDVVSWTSMIRGCVQNGELSEAMEL 289
+ + N+L+ Y G A V + DVVS+T ++ ++ + +A E+
Sbjct: 221 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 280
Query: 290 FRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMY 349
F M E KP++V + ++ G G L EI + ++G++ +V+ TLL
Sbjct: 281 FLMMRKE--RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 338
Query: 350 ADCGASRDARLVFEQMPSKTV----VSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPT 405
+ + V S+ + ++ S I Y+ + L++ M + +K
Sbjct: 339 SRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI-ALYQSMRKKKVKAD 397
Query: 406 AVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFG 465
+V+ + ++ R++ + E YL + + I ++ V ++ CA + G
Sbjct: 398 SVTFTILISGSCRMSKYP---EAISYL-KEMEDLSIPLTKEVYS------SVLCAYSKQG 447
Query: 466 EMNEKDTISWSMMIFGC------------SLHGQGKLG--VDLFRQLERNSEAPLDDNIY 511
++ E ++I M + GC + + K G +LF ++E N P D+I
Sbjct: 448 QVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEP--DSIA 505
Query: 512 AAALHACSTARMFEEG 527
+AL R F +G
Sbjct: 506 CSALM-----RAFNKG 516
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 134/294 (45%), Gaps = 18/294 (6%)
Query: 251 SMRDARLVFEKMPCK-DVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVST 309
SMR+ R C+ DVV++TS++ GE+ +F M EGL KP++V +
Sbjct: 308 SMREKR-----AECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGL--KPNIVSYNA 360
Query: 310 VLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK- 368
++ + G + G + +NG+ DV+ LL Y A+ VF M +
Sbjct: 361 LMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKER 420
Query: 369 ---TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHG 425
VV++ ++I Y GF E +FR+M +G+KP VS+ ++L AC R +
Sbjct: 421 RKPNVVTYNALIDAY-GSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNV 479
Query: 426 REIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK----DTISWSMMIFG 481
+ G+ + N+ I Y+ + + A+ ++ M +K D+++++++I G
Sbjct: 480 DTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISG 539
Query: 482 CSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR 535
+ + +++E S PL +Y++ L A S E FN ++
Sbjct: 540 SCRMSKYPEAISYLKEMEDLS-IPLTKEVYSSVLCAYSKQGQVTEAESIFNQMK 592
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 104/506 (20%), Positives = 207/506 (40%), Gaps = 79/506 (15%)
Query: 240 NSLLKMYVDCGSMRDARLVF---EKMPCK-DVVSWTSMIRGCVQNGELSEAMELFRRMNL 295
N +++++ + AR +F +K CK D ++ ++I + G+ AM L M L
Sbjct: 147 NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM-L 205
Query: 296 EGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMY------ 349
++ P + ++ CG G+ + E+ + NGV D++ N +L Y
Sbjct: 206 RA-AIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 350 -----------------------------ADCGASRDARLVFEQMPSK------TVVSWT 374
+ G S A +F M K VV++T
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 324
Query: 375 SMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLR 434
S++ Y KG N +F M +EGLKP VS ++++ A + G + +
Sbjct: 325 SIMHLYSVKGEIEN-CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 383
Query: 435 NGVEFDINVSNAVIDMYVKSGAIACALNVF----GEMNEKDTISWSMMIFGCSLHGQGKL 490
NG+ D+ +++ Y +S A VF E + + ++++ +I +G
Sbjct: 384 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 443
Query: 491 GVDLFRQLERNSEAPLDDNIYAAA--LHACSTA--RMFEEGRVCFNHIRGPMIAHCAQKV 546
V++FRQ+E++ P N+ + L ACS + ++ + + RG + A
Sbjct: 444 AVEIFRQMEQDGIKP---NVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNS 500
Query: 547 SL--LARCGLFDEAMVF---IREQKIEQHPEVLRKLLEG-CRIHGEYALGKQVIEQLCEL 600
++ ++A+ +R++K++ L+ G CR+ +Y ++++ +L
Sbjct: 501 AIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM-SKYPEAISYLKEMEDL 559
Query: 601 E-PLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDV 659
PL E Y +L ++ +G++ + I ++ G +P Y +H + +
Sbjct: 560 SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIA----YTSMLHAYNASE- 614
Query: 660 SHPRKKEICSALQGFMEEMRTEGVEP 685
+ A + F+ EM G+EP
Sbjct: 615 ------KWGKACELFL-EMEANGIEP 633
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 102/242 (42%), Gaps = 11/242 (4%)
Query: 231 GLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCK----DVVSWTSMIRGCVQNGELSEA 286
G+ A NS + Y++ + A +++ M K D V++T +I G + + EA
Sbjct: 490 GINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEA 549
Query: 287 MELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLL 346
+ + M E LS+ + S+VL G + I + G E DV+ ++L
Sbjct: 550 ISYLKEM--EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML 607
Query: 347 KMYADCGASRDARLVFEQMPSKTV----VSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGL 402
Y A +F +M + + ++ ++++R + KGG + VF L M + +
Sbjct: 608 HAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF-NKGGQPSNVFVLMDLMREKEI 666
Query: 403 KPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALN 462
T I AC + K ++ + I ++N ++ ++ KSG + +
Sbjct: 667 PFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMK 726
Query: 463 VF 464
+F
Sbjct: 727 LF 728
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 103/496 (20%), Positives = 195/496 (39%), Gaps = 56/496 (11%)
Query: 64 DTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAADF----SLG 119
D ++ LI+ H + A++ MLR A+ A + ++ +
Sbjct: 177 DAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVC 236
Query: 120 KQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFD--KTAPFGSDCWTFLAKLYV 177
K++ + V L + H ++ + Y S + A + F+ K A D TF +Y
Sbjct: 237 KKMTDNGVGPDLVT--HNIV--LSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYC 292
Query: 178 LE--GMPRSALELFHRMVXXXXX--XXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLE 233
L G AL+LF+ M + G + R V V GL+
Sbjct: 293 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 352
Query: 234 GEVFASNSLLKMYVDCGSMRDARLVFEKMP----CKDVVSWTSMIRGCVQNGELSEAMEL 289
+ + N+L+ Y G A V + DVVS+T ++ ++ + +A E+
Sbjct: 353 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 412
Query: 290 FRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMY 349
F M E KP++V + ++ G G L EI + ++G++ +V+ TLL
Sbjct: 413 FLMMRKE--RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 470
Query: 350 ADCGASRDARLVFEQMPSKTV----VSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPT 405
+ + V S+ + ++ S I Y+ + L++ M + +K
Sbjct: 471 SRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI-ALYQSMRKKKVKAD 529
Query: 406 AVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFG 465
+V+ + ++ R++ + E YL + + I ++ V ++ CA + G
Sbjct: 530 SVTFTILISGSCRMSKYP---EAISYL-KEMEDLSIPLTKEVYS------SVLCAYSKQG 579
Query: 466 EMNEKDTISWSMMIFGC------------SLHGQGKLG--VDLFRQLERNSEAPLDDNIY 511
++ E ++I M + GC + + K G +LF ++E N P D+I
Sbjct: 580 QVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEP--DSIA 637
Query: 512 AAALHACSTARMFEEG 527
+AL R F +G
Sbjct: 638 CSALM-----RAFNKG 648
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 134/267 (50%), Gaps = 12/267 (4%)
Query: 231 GLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCK----DVVSWTSMIRGCVQNGELSEA 286
G++ + NSLL + G AR +F++M + DV S+ +++ + G++ A
Sbjct: 334 GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393
Query: 287 MELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLL 346
E+ +M ++ + P++V STV+ G + G + G+ D + NTLL
Sbjct: 394 FEILAQMPVK--RIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLL 451
Query: 347 KMYADCGASRDARLVFEQMPS----KTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGL 402
+Y G S +A + +M S K VV++ +++ GY K+G ++ EV ++F +M E +
Sbjct: 452 SIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD-EVKKVFTEMKREHV 510
Query: 403 KPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALN 462
P ++ S+++ + +K EI G+ D+ + +A+ID K+G + A++
Sbjct: 511 LPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVS 570
Query: 463 VFGEMNEKDTISWSMMIFGCSLHGQGK 489
+ EM K+ IS +++ + + G+
Sbjct: 571 LIDEMT-KEGISPNVVTYNSIIDAFGR 596
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 153/348 (43%), Gaps = 59/348 (16%)
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCK----DVVSWTSMIRGCVQNGELSEAM 287
+E +VF+ N+LL G M A + +MP K +VVS++++I G + G EA+
Sbjct: 370 IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEAL 429
Query: 288 ELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLK 347
LF M G+++ D V +T+L + +G + +I + G++ DV+ N LL
Sbjct: 430 NLFGEMRYLGIAL--DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLG 487
Query: 348 MYADCGASRDARLVFEQMPSKTVV----SWTSMIRGYVKKGGFNN--EVFRLFR------ 395
Y G + + VF +M + V+ +++++I GY K G + E+FR F+
Sbjct: 488 GYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRA 547
Query: 396 --------------------------KMNSEGLKPTAVSISSILPACGRIASHKHGREIH 429
+M EG+ P V+ +SI+ A GR A+ +
Sbjct: 548 DVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYS 607
Query: 430 GYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGK 489
NG + S+A+ + G L FG++ T S + C G +
Sbjct: 608 -----NGGSLPFS-SSALSALTETEGNRVIQL--FGQLT---TESNNRTTKDCE-EGMQE 655
Query: 490 LG--VDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR 535
L +++FR++ + P + ++A L+ACS FE+ + +R
Sbjct: 656 LSCILEVFRKMHQLEIKP-NVVTFSAILNACSRCNSFEDASMLLEELR 702
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 84/412 (20%), Positives = 156/412 (37%), Gaps = 63/412 (15%)
Query: 286 AMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTL 345
A++ RR N +G + S ++ G G + + I G V + L
Sbjct: 222 AVKRERRKNEQG-------KLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSAL 274
Query: 346 LKMYADCGASRDARLVFEQMPS----KTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEG 401
+ Y G +A VF M +V++ ++I K G +V + F +M G
Sbjct: 275 ISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNG 334
Query: 402 LKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACAL 461
++P ++ +S+L C R + R + + +E D+ N ++D K G + A
Sbjct: 335 VQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAF 394
Query: 462 NVFGEMNEK----DTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHA 517
+ +M K + +S+S +I G + G+ ++LF ++ R LD
Sbjct: 395 EILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM-RYLGIALD---------- 443
Query: 518 CSTARMFEEGRVCFNHIRGPMIAHCAQKVSLLARCGLFDEAMVFIREQK---IEQHPEVL 574
RV +N + +S+ + G +EA+ +RE I++
Sbjct: 444 ----------RVSYNTL-----------LSIYTKVGRSEEALDILREMASVGIKKDVVTY 482
Query: 575 RKLLEGCRIHGEYALGKQVIEQLCELEPL-NAENYVLLLNWHAGKGKLDMVDKIRETIRE 633
LL G G+Y K+V ++ L N Y L++ ++ G +I +
Sbjct: 483 NALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKS 542
Query: 634 RGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEP 685
GL+ LY + K + + ++EM EG+ P
Sbjct: 543 AGLR----ADVVLYSALIDALC--------KNGLVGSAVSLIDEMTKEGISP 582
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 112/513 (21%), Positives = 220/513 (42%), Gaps = 75/513 (14%)
Query: 215 GSLRQGRDVHLIAVKLGLEGEVFASNSLLK-MYVDCGSM--RDARLVFEKMPCKDVVSWT 271
G + + D H + ++ G + + N +LK + VD + R LV + P +VV++
Sbjct: 231 GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFC 290
Query: 272 SMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLV 331
++I G + GE+ A +LF+ M G ++PDL+ ST++ G L G ++ +
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRG--IEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL 348
Query: 332 RNGVECDVLLSNTLLKMYADCGASRDARLVFEQM----PSKTVVSWTSMIRGYVKKGGFN 387
GV+ DV++ ++ + +Y G A +V+++M S VV++T +I+G + G
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI- 407
Query: 388 NEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAV 447
E F ++ ++ G++P+ V+ SS++ + + + G ++ +++ G D+ + +
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467
Query: 448 IDMYVKSGAIACALNVFGEMNEKDTISWSMMIFGCSLHGQGKL-----GVDLFRQLERNS 502
+D K G + A+ +M + +I ++++F + G +L + +FR +
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQ-SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526
Query: 503 EAPLDDNIYAAALHACSTARMFEE------GRVCFNHIR----GPMIAHCAQKVSLLARC 552
P D + + F + G F+ ++ IA C + LL +C
Sbjct: 527 IKP-DVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 585
Query: 553 GLFDEAMVFIR---EQKIEQHPEV------------LRKLLEGCRIHGEYALGKQVIEQL 597
++A F E K+E P++ LR+L E RI +L
Sbjct: 586 HRIEDASKFFNNLIEGKME--PDIVTYNTMICGYCSLRRLDEAERIF-----------EL 632
Query: 598 CELEPLNAENYVLLLNWHAGKGKLDMVDKIR--ETIRERGLKPKK---ACTWTLYREKVH 652
++ P L + H DM IR + E+G KP C + + V
Sbjct: 633 LKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVD 692
Query: 653 VFGTGDVSHPRKKEICSALQGFMEEMRTEGVEP 685
+ G+ + EEM+ +G+ P
Sbjct: 693 IEGSFKL---------------FEEMQEKGISP 710
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 100/493 (20%), Positives = 186/493 (37%), Gaps = 27/493 (5%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAAD 115
V D P + + + TLI+ A F M + + A
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 116 FSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSD----CWTF 171
+G +L + A+ + + I +Y D+A A ++ + G +T
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 172 LAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLG 231
L K +G A ++ +++ G+LR G ++ +K+G
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCK----DVVSWTSMIRGCVQNGELSEAM 287
+V L+ G M A KM + +VV + S+I G + EA+
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 288 ELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSL-KH-----GREIHGYLVRNGVECDVLL 341
++FR M + G +KPD+ +TV+ V M + KH G ++ + RN + D+ +
Sbjct: 517 KVFRLMGIYG--IKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAV 574
Query: 342 SNTLLKMYADCGASRDARLVFEQMP----SKTVVSWTSMIRGYVKKGGFNNEVFRLFRKM 397
N ++ + C DA F + +V++ +MI GY +E R+F +
Sbjct: 575 CNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL-DEAERIFELL 633
Query: 398 NSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAI 457
P V+++ ++ + + + G + + ++D + KS I
Sbjct: 634 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI 693
Query: 458 ACALNVFGEMNEK----DTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAA 513
+ +F EM EK +S+S++I G G+ ++F Q P D YA
Sbjct: 694 EGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLP-DVVAYAI 752
Query: 514 ALHA-CSTARMFE 525
+ C R+ E
Sbjct: 753 LIRGYCKVGRLVE 765
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 144/283 (50%), Gaps = 15/283 (5%)
Query: 215 GSLRQGRDVHLIAVKLGLEGEVFASNSLLK-MYVDCGSM--RDARLVFEKMPCKDVVSWT 271
G + + D H + ++ G + + N +LK + VD + R LV + P +VV++
Sbjct: 231 GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFC 290
Query: 272 SMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLV 331
++I G + GE+ A +LF+ M G ++PDL+ ST++ G L G ++ +
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRG--IEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL 348
Query: 332 RNGVECDVLLSNTLLKMYADCGASRDARLVFEQM----PSKTVVSWTSMIRGYVKKGGFN 387
GV+ DV++ ++ + +Y G A +V+++M S VV++T +I+G + G
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI- 407
Query: 388 NEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAV 447
E F ++ ++ G++P+ V+ SS++ + + + G ++ +++ G D+ + +
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467
Query: 448 IDMYVKSG----AIACALNVFGEMNEKDTISWSMMIFG-CSLH 485
+D K G A+ ++ + G+ + + ++ +I G C L+
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLN 510
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 102/522 (19%), Positives = 187/522 (35%), Gaps = 56/522 (10%)
Query: 56 VFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAAD 115
V D P + + + TLI+ A F M + + A
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 116 FSLGKQLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSD----CWTF 171
+G +L + A+ + + I +Y D+A A ++ + G +T
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 172 LAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLG 231
L K +G A ++ +++ G+LR G ++ +K+G
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCK----DVVSWTSMIRGCVQNGELSEAM 287
+V L+ G M A KM + +VV + S+I G + EA+
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 288 ELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSL--------------------------- 320
++FR M + G +KPD+ +TV+ V M G L
Sbjct: 517 KVFRLMGIYG--IKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLID 574
Query: 321 ---KH-----GREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMP----SK 368
KH G ++ + RN + D+ + N ++ + C DA F +
Sbjct: 575 AFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP 634
Query: 369 TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREI 428
+V++ +MI GY +E R+F + P V+++ ++ + +
Sbjct: 635 DIVTYNTMICGYCSLRRL-DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693
Query: 429 HGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK----DTISWSMMIFGCSL 484
+ G + + ++D + KS I + +F EM EK +S+S++I G
Sbjct: 694 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 753
Query: 485 HGQGKLGVDLFRQLERNSEAPLDDNIYAAALHA-CSTARMFE 525
G+ ++F Q P D YA + C R+ E
Sbjct: 754 RGRVDEATNIFHQAIDAKLLP-DVVAYAILIRGYCKVGRLVE 794
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 95/195 (48%), Gaps = 8/195 (4%)
Query: 318 GSLKHGREIHGYLVRNGVECDVLLSNTLLK-MYADC--GASRDARLVFEQMPSKTVVSWT 374
G + + H ++ G ++ N +LK + D ASR LV + P+ VV++
Sbjct: 231 GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFC 290
Query: 375 SMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLR 434
++I G+ K+G + F LF+ M G++P ++ S+++ + G ++ L
Sbjct: 291 TLINGFCKRGEMD-RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 349
Query: 435 NGVEFDINVSNAVIDMYVKSGAIACALNVFGEM----NEKDTISWSMMIFGCSLHGQGKL 490
GV+ D+ V ++ ID+YVKSG +A A V+ M + ++++++I G G+
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 491 GVDLFRQLERNSEAP 505
++ Q+ + P
Sbjct: 410 AFGMYGQILKRGMEP 424
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 131/261 (50%), Gaps = 12/261 (4%)
Query: 266 DVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGRE 325
D+V++ ++I+G ++ EL++A E+F+ + G PD+V ++++ G ++
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVK-SGSVCSPDVVTYTSMISGYCKAGKMREASS 298
Query: 326 IHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPS----KTVVSWTSMIRGYV 381
+ ++R G+ + N L+ YA G A + +M S VV++TS+I GY
Sbjct: 299 LLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 382 KKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDI 441
+ G + + FRL+ +MN+ G+ P A + S ++ A RE+ G L +
Sbjct: 359 RVGQVS-QGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQP 417
Query: 442 NVSNAVIDMYVKSGAIACALNVFGEMNEK----DTISWSMMIFGCSLHGQGKLGVDLFRQ 497
+ N VID + K+G + A + EM +K D I+++++I G + G+ V +F +
Sbjct: 418 FMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHK 477
Query: 498 LERNSEAPLDDNIYAAALHAC 518
+ +P D I ++L +C
Sbjct: 478 MVAIGCSP--DKITVSSLLSC 496
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 11/207 (5%)
Query: 215 GSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPC----KDVVSW 270
G +R+ + ++LG+ N L+ Y G M A + KM DVV++
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTF 350
Query: 271 TSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYL 330
TS+I G + G++S+ L+ MN G+ P+ S ++ L RE+ G L
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMF--PNAFTYSILINALCNENRLLKARELLGQL 408
Query: 331 VRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTV----VSWTSMIRGYVKKGGF 386
+ + N ++ + G +A ++ E+M K +++T +I G+ KG
Sbjct: 409 ASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRM 468
Query: 387 NNEVFRLFRKMNSEGLKPTAVSISSIL 413
E +F KM + G P +++SS+L
Sbjct: 469 -FEAVSIFHKMVAIGCSPDKITVSSLL 494
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 106/261 (40%), Gaps = 51/261 (19%)
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEK----MPCKDVVSWTSMIRGCVQNGELSEAM 287
+EG NSLL V + DA +F++ C D ++ +IRG
Sbjct: 167 VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRG----------- 215
Query: 288 ELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLK 347
+CG +G + E+ G + G E D++ NTL++
Sbjct: 216 -------------------------LCG-VGKAEKALELLGVMSGFGCEPDIVTYNTLIQ 249
Query: 348 MYADCGASRDARLVFEQMPSKTV-----VSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGL 402
+ A +F+ + S +V V++TSMI GY K G E L M G+
Sbjct: 250 GFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR-EASSLLDDMLRLGI 308
Query: 403 KPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALN 462
PT V+ + ++ + EI G ++ G D+ ++ID Y + G ++
Sbjct: 309 YPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFR 368
Query: 463 VFGEMNEK----DTISWSMMI 479
++ EMN + + ++S++I
Sbjct: 369 LWEEMNARGMFPNAFTYSILI 389
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 131/261 (50%), Gaps = 12/261 (4%)
Query: 266 DVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGRE 325
D+V++ ++I+G ++ EL++A E+F+ + G PD+V ++++ G ++
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVK-SGSVCSPDVVTYTSMISGYCKAGKMREASS 298
Query: 326 IHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPS----KTVVSWTSMIRGYV 381
+ ++R G+ + N L+ YA G A + +M S VV++TS+I GY
Sbjct: 299 LLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 382 KKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDI 441
+ G + + FRL+ +MN+ G+ P A + S ++ A RE+ G L +
Sbjct: 359 RVGQVS-QGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQP 417
Query: 442 NVSNAVIDMYVKSGAIACALNVFGEMNEK----DTISWSMMIFGCSLHGQGKLGVDLFRQ 497
+ N VID + K+G + A + EM +K D I+++++I G + G+ V +F +
Sbjct: 418 FMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHK 477
Query: 498 LERNSEAPLDDNIYAAALHAC 518
+ +P D I ++L +C
Sbjct: 478 MVAIGCSP--DKITVSSLLSC 496
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 11/207 (5%)
Query: 215 GSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPC----KDVVSW 270
G +R+ + ++LG+ N L+ Y G M A + KM DVV++
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTF 350
Query: 271 TSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYL 330
TS+I G + G++S+ L+ MN G+ P+ S ++ L RE+ G L
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMF--PNAFTYSILINALCNENRLLKARELLGQL 408
Query: 331 VRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTV----VSWTSMIRGYVKKGGF 386
+ + N ++ + G +A ++ E+M K +++T +I G+ KG
Sbjct: 409 ASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRM 468
Query: 387 NNEVFRLFRKMNSEGLKPTAVSISSIL 413
E +F KM + G P +++SS+L
Sbjct: 469 -FEAVSIFHKMVAIGCSPDKITVSSLL 494
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 106/261 (40%), Gaps = 51/261 (19%)
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEK----MPCKDVVSWTSMIRGCVQNGELSEAM 287
+EG NSLL V + DA +F++ C D ++ +IRG
Sbjct: 167 VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRG----------- 215
Query: 288 ELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLK 347
+CG +G + E+ G + G E D++ NTL++
Sbjct: 216 -------------------------LCG-VGKAEKALELLGVMSGFGCEPDIVTYNTLIQ 249
Query: 348 MYADCGASRDARLVFEQMPSKTV-----VSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGL 402
+ A +F+ + S +V V++TSMI GY K G E L M G+
Sbjct: 250 GFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR-EASSLLDDMLRLGI 308
Query: 403 KPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALN 462
PT V+ + ++ + EI G ++ G D+ ++ID Y + G ++
Sbjct: 309 YPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFR 368
Query: 463 VFGEMNEK----DTISWSMMI 479
++ EMN + + ++S++I
Sbjct: 369 LWEEMNARGMFPNAFTYSILI 389
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 144/322 (44%), Gaps = 21/322 (6%)
Query: 215 GSLRQGR--DVHLIAVKLGLEG---EVFASNSLLKMYVDCGSMRDARLVFEKMP----CK 265
G R+GR +V + ++ G + N+L+K Y G+ A ++ +M
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 266 DVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGRE 325
V+++TS+I + G ++ AME +M + GL P+ +T++ G +
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC--PNERTYTTLVDGFSQKGYMNEAYR 401
Query: 326 IHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK----TVVSWTSMIRGYV 381
+ + NG V+ N L+ + G DA V E M K VVS+++++ G+
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461
Query: 382 KKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDI 441
+ + E R+ R+M +G+KP ++ SS++ K +++ +LR G+ D
Sbjct: 462 RSYDVD-EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520
Query: 442 NVSNAVIDMYVKSGAIACALNVFGEMNEK----DTISWSMMIFGCSLHGQGKLGVDLFRQ 497
A+I+ Y G + AL + EM EK D +++S++I G + + + L +
Sbjct: 521 FTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLK 580
Query: 498 LERNSEAPLDDNIYAAALHACS 519
L P D Y + CS
Sbjct: 581 LFYEESVP-SDVTYHTLIENCS 601
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 145/328 (44%), Gaps = 49/328 (14%)
Query: 236 VFASNSLLKMYVDCGSMRDARLVFEKMPCK----DVVSWTSMIRGCVQNGELSEAMELFR 291
VF N L++ + G++ A +F+KM K +VV++ ++I G + ++ + +L R
Sbjct: 205 VFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLR 264
Query: 292 RMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYAD 351
M L+GL +P+L+ + V+ G +K + + R G D + NTL+K Y
Sbjct: 265 SMALKGL--EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 352 CGASRDARLVFEQM----PSKTVVSWTSMIRGYVKKG----------------------- 384
G A ++ +M + +V+++TS+I K G
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 385 -----------GFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLL 433
G+ NE +R+ R+MN G P+ V+ ++++ + + +
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442
Query: 434 RNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK----DTISWSMMIFGCSLHGQGK 489
G+ D+ + V+ + +S + AL V EM EK DTI++S +I G + K
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 490 LGVDLFRQLERNSEAPLDDNIYAAALHA 517
DL+ ++ R P D+ Y A ++A
Sbjct: 503 EACDLYEEMLRVGLPP-DEFTYTALINA 529
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 174/395 (44%), Gaps = 53/395 (13%)
Query: 231 GLEGEVFASNSLLKMYVDCGSMRDARLVFEKMP----CKDVVSWTSMIRGCVQNGELSEA 286
G+ ++ A NS++ +Y R+ARL+ ++M + VS+++++ V+N + EA
Sbjct: 255 GITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEA 314
Query: 287 MELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLL 346
+ +F M + ++ DL + ++ V G + +K + L + +E +V+ NT+L
Sbjct: 315 LSVFAEM--KEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTIL 372
Query: 347 KMYADCGASRDARLVFEQMPSK----TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGL 402
++Y + +A +F M K VV++ +MI+ Y K + + L ++M S G+
Sbjct: 373 RVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTME-HEKATNLVQEMQSRGI 431
Query: 403 KPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALN 462
+P A++ S+I+ G+ + L +GVE D + +I Y + G + A
Sbjct: 432 EPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKR 491
Query: 463 VFGEMNEKDTI------------------SW------------SMMIFGC--SLHGQGKL 490
+ E+ D I +W + +FGC +L+ + +
Sbjct: 492 LLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQR 551
Query: 491 GVDLFRQLERNSEAPL--DDNIYAAALHACSTARMFEEGRVCFNHIRG-----PMIAHCA 543
V++ E+ A D N+ A L+A R FE+ + ++ P H
Sbjct: 552 YVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHF- 610
Query: 544 QKVSLLARCGLFDEAMVFIREQKIEQHPEVLRKLL 578
Q +SL + F+ MV Q++E P V K L
Sbjct: 611 QMLSLYSSKKDFE--MVESLFQRLESDPNVNSKEL 643
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/455 (20%), Positives = 187/455 (41%), Gaps = 63/455 (13%)
Query: 236 VFASNSLLKMYVDCGSMRDARLVFEKMPCK----DVVSWTSMIRGCVQNGELSEAMELFR 291
VFA N +L+ + A +F++M + D +++++I + G A+ +
Sbjct: 155 VFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQ 214
Query: 292 RMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYAD 351
+M E V DLV+ S ++ + + I L R+G+ D++ N+++ +Y
Sbjct: 215 KM--EQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 352 CGASRDARLVFEQMPSKTV----VSWTSMIRGYVKKGGF--------------------- 386
R+ARL+ ++M V VS+++++ YV+ F
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 332
Query: 387 -------------NNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLL 433
E RLF + ++P VS ++IL G + G IH + L
Sbjct: 333 CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGE--AELFGEAIHLFRL 390
Query: 434 --RNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMN----EKDTISWSMMIFGCSLHGQ 487
R +E ++ N +I +Y K+ A N+ EM E + I++S +I G+
Sbjct: 391 MQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGK 450
Query: 488 GKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRGPMIAHCAQKVS 547
LF++L R+S +D +Y + A + + + ++ P ++
Sbjct: 451 LDRAATLFQKL-RSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAIT 509
Query: 548 LLARCGLFDEAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAEN 607
+LA+ G +EA R+ + EV + GC I+ Y+ ++ + + E +
Sbjct: 510 ILAKAGRTEEATWVFRQAF--ESGEVKDISVFGCMINL-YSRNQRYVNVIEVFEKMRTAG 566
Query: 608 Y-------VLLLNWHAGKGKLDMVDKIRETIRERG 635
Y ++LN + + + + D + ++E G
Sbjct: 567 YFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEG 601
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 15/289 (5%)
Query: 229 KLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCK----DVVSWTSMIRGCVQNGELS 284
K G+ +V NSL+ G DA + M + DV ++ ++I CV+ G +S
Sbjct: 214 KDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVS 273
Query: 285 EAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNT 344
EA E + M S+ PD+V S ++ M L E+ G++V G DV+ +
Sbjct: 274 EAEEFYEEMIRR--SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI 331
Query: 345 LLKMYADCGASRDARLVFEQMPSKTVV----SWTSMIRGYVKKGGFNNEVFRLFRKMNSE 400
L+ Y +F +M + VV ++T +I+GY + G N +FR+M
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN-VAEEIFRRMVFC 390
Query: 401 GLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACA 460
G+ P ++ + +L + I + +NG++ DI N +I K+G +A A
Sbjct: 391 GVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
Query: 461 LNVFGEMNEK----DTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAP 505
+++ +N + D +++ M+ G G + LFR+++ + P
Sbjct: 451 WDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 132/283 (46%), Gaps = 19/283 (6%)
Query: 230 LGLEGEVFASNSLLKMYVDCGSMRDARLVFEKM------PCKDVVSWTSMIRGCVQNGEL 283
LG+ + N LL + C + A KM P +V++ S++ G + +
Sbjct: 110 LGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEP--SIVTFGSLLNGFCRGDRV 167
Query: 284 SEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSN 343
+A+ +F +M G+ KP++V+ +T++ + + ++ + ++G+ DV+ N
Sbjct: 168 YDALYMFDQM--VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 344 TLLKMYADCGASRDARLVFEQMPSK----TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNS 399
+L+ G DA + M + V ++ ++I VK+G + E + +M
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVS-EAEEFYEEMIR 284
Query: 400 EGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIAC 459
L P V+ S ++ + E+ G+++ G D+ + +I+ Y KS +
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 460 ALNVFGEMNE----KDTISWSMMIFGCSLHGQGKLGVDLFRQL 498
+ +F EM++ ++T++++++I G G+ + ++FR++
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 124/245 (50%), Gaps = 12/245 (4%)
Query: 250 GSMRDARLVFEKMPCK----DVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLV 305
GS DA +F +M K DVV+++S+I G +G+ + ++ R M G ++ PD+V
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM--IGRNIIPDVV 316
Query: 306 MVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQM 365
S ++ V G L +E++ ++ G+ D + N+L+ + +A +F+ M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 366 PSK----TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIAS 421
SK +V+++ +I Y K ++ + RLFR+++S+GL P ++ ++++ +
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGM-RLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 422 HKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTISWSMMIFG 481
+E+ ++ GV + ++D +G + AL +F +M +K ++ + I+
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM-QKSRMTLGIGIYN 494
Query: 482 CSLHG 486
+HG
Sbjct: 495 IIIHG 499
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 109/224 (48%), Gaps = 11/224 (4%)
Query: 266 DVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGRE 325
D +++++++ G G +SEA+ L RM + +PDLV VST++ + G +
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRM--VEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 326 IHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK----TVVSWTSMIRGYV 381
+ +V G + D + +L G S A +F +M + +VV ++ +I
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 382 KKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDI 441
K G F ++ LF +M +G+K V+ SS++ G ++ ++ + D+
Sbjct: 257 KDGSF-DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 315
Query: 442 NVSNAVIDMYVKSGAIACALNVFGEMNEK----DTISWSMMIFG 481
+A+ID++VK G + A ++ EM + DTI+++ +I G
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG 359
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 123/296 (41%), Gaps = 50/296 (16%)
Query: 231 GLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCK----DVVSWTSMIRGCVQNGELSEA 286
G++ +V +SL+ + G D + +M + DVV+++++I V+ G+L EA
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 287 MELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLL 346
EL+ M G++ PD + ++++ L ++ +V G E D++ + L+
Sbjct: 335 KELYNEMITRGIA--PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392
Query: 347 KMYADCGASRDARLVFEQMPSK----TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGL 402
Y D +F ++ SK +++ +++ G+ + G N LF++M S G+
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN-AAKELFQEMVSRGV 451
Query: 403 KPTAVSISSILPACGRIASHKHGREI--------------------HGY----------- 431
P+ V+ +L EI HG
Sbjct: 452 PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWS 511
Query: 432 ----LLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK----DTISWSMMI 479
L GV+ D+ N +I K G+++ A +F +M E D +++++I
Sbjct: 512 LFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 104/493 (21%), Positives = 201/493 (40%), Gaps = 71/493 (14%)
Query: 231 GLEGEVFASNSLLKMYVDCGSMRDARLVFEKMP---CKDVVSWTSMIRGCV--QNGELSE 285
G +V++ SL+ + + G R+A VF+KM CK + ++I ++
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 286 AMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSL-KHGREIHGYLVRNGVECDVLLSNT 344
L +M +G++ PD +T++ C GSL + ++ + G D + N
Sbjct: 263 ITSLVEKMKSDGIA--PDAYTYNTLITCCKR-GSLHQEAAQVFEEMKAAGFSYDKVTYNA 319
Query: 345 LLKMYADCGASRDARLVFEQMP----SKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSE 400
LL +Y ++A V +M S ++V++ S+I Y + G + E L +M +
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLD-EAMELKNQMAEK 378
Query: 401 GLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACA 460
G KP + +++L R + I + G + +I NA I MY G
Sbjct: 379 GTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEM 438
Query: 461 LNVFGEMN----EKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALH 516
+ +F E+N D ++W+ ++ +G +F++++R P + + +
Sbjct: 439 MKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP-ERETFNTLIS 497
Query: 517 ACSTARMFEEGRVCFNHIRG----PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQHPE 572
A S FE+ + + P ++ ++ LAR G++ EQ +
Sbjct: 498 AYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMW------------EQSEK 545
Query: 573 VLRKLLEG---------CRIHGEYALGKQV--IEQLCE------LEPLNAENYVLLLNWH 615
VL ++ +G C + YA GK++ + L E +EP VLL
Sbjct: 546 VLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEP----RAVLLKTLV 601
Query: 616 AGKGKLDMV---DKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQ 672
K D++ ++ ++ERG P T V ++G ++++ +
Sbjct: 602 LVCSKCDLLPEAERAFSELKERGFSPD----ITTLNSMVSIYG--------RRQMVAKAN 649
Query: 673 GFMEEMRTEGVEP 685
G ++ M+ G P
Sbjct: 650 GVLDYMKERGFTP 662
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 114/274 (41%), Gaps = 13/274 (4%)
Query: 303 DLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVF 362
D +V+ ++ + G G + + L +G DV +L+ +A+ G R+A VF
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 363 EQMP----SKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGR 418
++M T++++ ++ + K G N++ L KM S+G+ P A + ++++ C R
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR 291
Query: 419 IASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMN----EKDTIS 474
+ H+ ++ + G +D NA++D+Y KS A+ V EM ++
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVT 351
Query: 475 WSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHI 534
++ +I + G ++L Q+ P D Y L A E F +
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKP-DVFTYTTLLSGFERAGKVESAMSIFEEM 410
Query: 535 RG----PMIAHCAQKVSLLARCGLFDEAMVFIRE 564
R P I + + G F E M E
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 122/278 (43%), Gaps = 17/278 (6%)
Query: 160 KTAPFGSDCWTF--LAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSL 217
K A F D T+ L +Y P+ A+++ + MV G L
Sbjct: 306 KAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGML 365
Query: 218 RQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKM---PCK-DVVSWTSM 273
+ ++ + G + +VF +LL + G + A +FE+M CK ++ ++ +
Sbjct: 366 DEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAF 425
Query: 274 IRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRN 333
I+ G+ +E M++F +N+ GLS PD+V +T+L V G G + + R
Sbjct: 426 IKMYGNRGKFTEMMKIFDEINVCGLS--PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA 483
Query: 334 GVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTV---VSWTSMIRGYVKKGGFNNEV 390
G + NTL+ Y+ CG+ A V+ +M V +S + + + +GG +
Sbjct: 484 GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS 543
Query: 391 FRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREI 428
++ +M KP ++ S+L A + +G+EI
Sbjct: 544 EKVLAEMEDGRCKPNELTYCSLLHA------YANGKEI 575
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 151/305 (49%), Gaps = 19/305 (6%)
Query: 231 GLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDV----VSWTSMIRGCVQNGELSEA 286
G+E +V SL+ G+M+ A L+F+++ K + ++ ++I G + GE+ A
Sbjct: 324 GIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAA 383
Query: 287 MELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLL 346
L M +G+++ V+ +T++ G + I+ + + G + DV NT+
Sbjct: 384 EILMNEMQSKGVNITQ--VVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIA 441
Query: 347 KMYADCGASRDARL-VFEQMPSK---TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGL 402
+ +A+ +F M + VS+T++I Y K+G E RLF +M+S+G+
Sbjct: 442 SCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVE-EAKRLFVEMSSKGV 500
Query: 403 KPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALN 462
+P A++ + ++ A + K R++ + NG++ D ++I + + A+
Sbjct: 501 QPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMR 560
Query: 463 VFGEMN----EKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAA---AL 515
+F EM +++++++++MI G S G+ L+ +++R +D+ +Y A ++
Sbjct: 561 LFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKG-YTIDNKVYTALIGSM 619
Query: 516 HACST 520
H+ T
Sbjct: 620 HSPET 624
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 166/398 (41%), Gaps = 22/398 (5%)
Query: 186 LELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRD-VHLIAVKLGLEGEVFASNSLLK 244
LE+F RMV G + + + + +VK G++ E + N+++
Sbjct: 209 LEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVK-GIKPEAYTYNTIIN 267
Query: 245 MYVDCGSMRDARLVFEKMPCKDVV----SWTSMIRGCVQNGELSEAMELFRRMNLEGLSV 300
YV V + M VV ++T ++ V+NG++S+A +LF M G +
Sbjct: 268 AYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERG--I 325
Query: 301 KPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARL 360
+ D+ + ++++ G++K + L G+ L+ G A +
Sbjct: 326 ESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEI 385
Query: 361 VFEQMPSK----TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPAC 416
+ +M SK T V + ++I GY +K G +E ++ M +G + + ++I
Sbjct: 386 LMNEMQSKGVNITQVVFNTLIDGYCRK-GMVDEASMIYDVMEQKGFQADVFTCNTIASCF 444
Query: 417 GRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK----DT 472
R+ + ++ ++ GV+ +ID+Y K G + A +F EM+ K +
Sbjct: 445 NRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNA 504
Query: 473 ISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFN 532
I++++MI+ G+ K L +E N P D Y + +H A +E F+
Sbjct: 505 ITYNVMIYAYCKQGKIKEARKLRANMEANGMDP-DSYTYTSLIHGECIADNVDEAMRLFS 563
Query: 533 HIRGPMIAHCAQK----VSLLARCGLFDEAMVFIREQK 566
+ + + +S L++ G DEA E K
Sbjct: 564 EMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMK 601
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 142/291 (48%), Gaps = 15/291 (5%)
Query: 227 AVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMP---CK-DVVSWTSMIRGCVQNGE 282
+KLG E + N+L+K G + +A ++ ++M C+ DVV++ S++ G ++G+
Sbjct: 149 VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGD 208
Query: 283 LSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLS 342
S A++L R+M E +VK D+ ST++ G + + + G++ V+
Sbjct: 209 TSLALDLLRKM--EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 266
Query: 343 NTLLKMYADCGASRDARLVFEQMPSK----TVVSWTSMIRGYVKKGGFNNEVFRLFRKMN 398
N+L++ G D L+ + M S+ V+++ ++ +VK+G E L+++M
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL-QEANELYKEMI 325
Query: 399 SEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIA 458
+ G+ P ++ ++++ + ++RN DI ++I Y +
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 459 CALNVFGEMNEK----DTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAP 505
+ VF ++++ + +++S+++ G G+ KL +LF+++ + P
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 436
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 117/261 (44%), Gaps = 11/261 (4%)
Query: 215 GSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKM---PCK-DVVSW 270
G L++ +++ + G+ + N+L+ Y + +A + + M C D+V++
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 271 TSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYL 330
TS+I+G + + M++FR ++ GL + V S ++ G +K E+ +
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLV--ANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 331 VRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKT----VVSWTSMIRGYVKKGGF 386
V +GV DV+ LL D G A +FE + +V +T++I G KGG
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC-KGGK 488
Query: 387 NNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNA 446
+ + LF + +G+KP ++ + ++ + S + + +G + N
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548
Query: 447 VIDMYVKSGAIACALNVFGEM 467
+I +++ G + + + EM
Sbjct: 549 LIRAHLRDGDLTASAKLIEEM 569
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 192/457 (42%), Gaps = 28/457 (6%)
Query: 136 HTLIALIHLYASLDDIAVAQTLFDKTAPFG--SDCWTF--LAKLYVLEGMPRSALELFHR 191
+TL +I+ +++A + K G D TF L LEG ALEL R
Sbjct: 108 YTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDR 167
Query: 192 MVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLI--AVKLGLEGEVFASNSLLKMYVDC 249
MV + G + V LI V+ G + +LK+
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDA--VLLIDRMVETGFQPNEVTYGPVLKVMCKS 225
Query: 250 GSMRDARLVFEKMPCK----DVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLV 305
G A + KM + D V ++ +I G ++G L A LF M ++G K D++
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF--KADII 283
Query: 306 MVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQM 365
+ +T++ G G ++ +++ + DV+ + L+ + G R+A + ++M
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 366 PSKTV----VSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIAS 421
+ + V++TS+I G+ K+ ++ + M S+G P + + ++ +
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQL-DKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 422 HKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK----DTISWSM 477
G E+ + GV D N +I + + G + A +F EM + D +S+ +
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 478 MIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEG--RVCFNHIR 535
++ G +G+ + +++F ++E+ S+ LD IY +H A ++ C ++
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEK-SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 521
Query: 536 G--PMIAHCAQKVSLLARCGLFDEAMVFIREQKIEQH 570
G P + + L + G EA + R+ + + H
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/463 (20%), Positives = 190/463 (41%), Gaps = 39/463 (8%)
Query: 228 VKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKM------PCKDVVSWTSMIRGCVQNG 281
+KLG E + ++L+ G + +A + ++M P +++ +++ G NG
Sbjct: 134 IKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT--LITLNALVNGLCLNG 191
Query: 282 ELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLL 341
++S+A+ L RM G +P+ V VL V G E+ + ++ D +
Sbjct: 192 KVSDAVLLIDRMVETGF--QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 342 SNTLLKMYADCGASRDARLVFEQMPSK----TVVSWTSMIRGYVKKGGFNNEVFRLFRKM 397
+ ++ G+ +A +F +M K ++ +T++IRG+ G +++ +L R M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGA-KLLRDM 308
Query: 398 NSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAI 457
+ P V+ S+++ + + E+H +++ G+ D ++ID + K +
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 458 ACALNVFGEMNEK----DTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAA 513
A ++ M K + +++++I G G++LFR++ D Y
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA-DTVTYNT 427
Query: 514 ALHACSTARMFEEGRVCFNH-----IRGPMIAHCAQKVSLLARCGLFDEAMVFIREQKIE 568
+ E + F +R ++++ K+ L C + +KIE
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY---KILLDGLCDNGEPEKALEIFEKIE 484
Query: 569 QHPEVLRKLLEGCRIHGEYALGK--QVIEQLCELEPL-----NAENYVLLLNWHAGKGKL 621
+ L + IHG K + C L PL + + Y +++ KG L
Sbjct: 485 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL-PLKGVKPDVKTYNIMIGGLCKKGSL 543
Query: 622 DMVDKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRK 664
D + + E G P CT+ + + H+ G GD + K
Sbjct: 544 SEADLLFRKMEEDGHSP-NGCTYNILI-RAHL-GEGDATKSAK 583
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 148/319 (46%), Gaps = 23/319 (7%)
Query: 231 GLEGEVFASNSLLKMYVDCGSMRDA-RLV---FEKMPCKDVVSWTSMIRGCVQNGELSEA 286
G+ V NSL++ + G DA RL+ E+ +VV+++++I V+ G+L EA
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 287 MELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLL 346
+L+ M S+ PD+ S+++ M L + + ++ +V+ NTL+
Sbjct: 345 EKLYDEMIKR--SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 347 KMYADCGASRDARLVFEQMPSK----TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGL 402
K + + +F +M + V++ ++I+G + G + ++F+KM S+G+
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ-KIFKKMVSDGV 461
Query: 403 KPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALN 462
P ++ S +L + + + YL ++ +E DI N +I+ K+G + +
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 463 VFGEMNEK----DTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHA- 517
+F ++ K + I ++ MI G G + LFR+++ + P + Y + A
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP-NSGTYNTLIRAR 580
Query: 518 ------CSTARMFEEGRVC 530
++A + +E R C
Sbjct: 581 LRDGDKAASAELIKEMRSC 599
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 118/277 (42%), Gaps = 42/277 (15%)
Query: 215 GSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKD----VVSW 270
G L + ++ +K ++ ++F +SL+ + + +A+ +FE M KD VV++
Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398
Query: 271 TSMIRGCVQNGELSEAMELFRRMNLEGL-------------------------------- 298
++I+G + + E MELFR M+ GL
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 299 -SVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRD 357
V PD++ S +L G L+ + YL ++ +E D+ N +++ G D
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Query: 358 ARLVFEQMPSK----TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSIL 413
+F + K V+ +T+MI G+ +K G E LFR+M +G P + + ++++
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRK-GLKEEADALFREMKEDGTLPNSGTYNTLI 577
Query: 414 PACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDM 450
A R E+ + G D + + VI+M
Sbjct: 578 RARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM 614
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 103/230 (44%), Gaps = 11/230 (4%)
Query: 266 DVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGRE 325
D+V+ +S++ G +SEA+ L +M + + +P+ V +T++ +
Sbjct: 149 DIVTLSSLLNGYCHGKRISEAVALVDQMFV--MEYQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 326 IHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPS----KTVVSWTSMIRGYV 381
+ +V G + D+ T++ G A + ++M VV +T++I
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC 266
Query: 382 KKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDI 441
N+ LF +M+++G++P V+ +S++ + ++ + ++
Sbjct: 267 NYKNV-NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 442 NVSNAVIDMYVKSGAIACALNVFGEMNEK----DTISWSMMIFGCSLHGQ 487
+A+ID +VK G + A ++ EM ++ D ++S +I G +H +
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 151/385 (39%), Gaps = 59/385 (15%)
Query: 258 VFEKMPC----KDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPV 313
VF++MP + V S+T++I +NG ++EL RM E +S P ++ +TV+
Sbjct: 163 VFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKIS--PSILTYNTVINA 220
Query: 314 CGMIGSLKHGR-EIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQM------P 366
C G G + + G++ D++ NTLL A G +A +VF M P
Sbjct: 221 CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVP 280
Query: 367 SKT---------------------------------VVSWTSMIRGYVKKGGFNNEVFRL 393
T + S+ ++ Y K G E +
Sbjct: 281 DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIK-EAMGV 339
Query: 394 FRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVK 453
F +M + G P A + S +L G+ + R++ + + + D N +I+++ +
Sbjct: 340 FHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGE 399
Query: 454 SGAIACALNVFGEMNEK----DTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDN 509
G + +F +M E+ D ++ +IF C G + + + + N P
Sbjct: 400 GGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVP-SSK 458
Query: 510 IYAAALHACSTARMFEEGRVCFNHI----RGPMIAHCAQKVSLLARCGLFDEAMVFIR-- 563
Y + A A ++EE V FN + P I + AR GL E+ +
Sbjct: 459 AYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRL 518
Query: 564 -EQKIEQHPEVLRKLLEGCRIHGEY 587
+ I ++ + +E + G++
Sbjct: 519 VDSGIPRNRDTFNAQIEAYKQGGKF 543
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 122/305 (40%), Gaps = 49/305 (16%)
Query: 266 DVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGRE 325
D+V++ +++ C G EA +FR MN G + PDL S ++ G + L+ +
Sbjct: 246 DIVTYNTLLSACAIRGLGDEAEMVFRTMNDGG--IVPDLTTYSHLVETFGKLRRLEKVCD 303
Query: 326 IHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQM------PSKTVVSWTSMIRG 379
+ G + G D+ N LL+ YA G+ ++A VF QM P+ S + G
Sbjct: 304 LLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFG 363
Query: 380 YVKK--------------------------------GGFNNEVFRLFRKMNSEGLKPTAV 407
+ GG+ EV LF M E ++P
Sbjct: 364 QSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDME 423
Query: 408 SISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEM 467
+ I+ ACG+ H+ R+I Y+ N + VI+ + ++ AL F M
Sbjct: 424 TYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTM 483
Query: 468 NEKDTISWSMMIFGCSLHGQGKLGVDLFRQLER------NSEAPLDDNIYAAALHACSTA 521
+E + + S+ F L+ + G L ++ E +S P + + + A + A
Sbjct: 484 HEVGS-NPSIETFHSLLYSFARGG--LVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQG 540
Query: 522 RMFEE 526
FEE
Sbjct: 541 GKFEE 545
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 106/479 (22%), Positives = 208/479 (43%), Gaps = 33/479 (6%)
Query: 228 VKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMP----CKDVVSWTSMIRGCVQNGEL 283
+KLG E ++ +SLL Y + DA + ++M D ++T++I G + +
Sbjct: 145 MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKA 204
Query: 284 SEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSN 343
SEA+ L +M G +PDLV TV+ G + + + + +E DV++ N
Sbjct: 205 SEAVALVDQMVQRG--CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 262
Query: 344 TLLKMYADCGASRDARLVFEQMPSK----TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNS 399
T++ DA +F +M +K V +++S+I G + ++ RL M
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW-SDASRLLSDMIE 321
Query: 400 EGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIAC 459
+ P V+ S+++ A + +++ +++ ++ DI +++I+ + +
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 460 ALNVFGEMNEKD----TISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDN--IYAA 513
A ++F M KD +++S +I G + + G++LFR++ S+ L N Y
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM---SQRGLVGNTVTYTT 438
Query: 514 ALHACSTARMFEEGRVCFNHIRG----PMIAHCAQKVSLLARCGLFDEAMV---FIREQK 566
+H AR + ++ F + P I + L + G +AMV +++
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 567 IEQHPEVLRKLLEGCRIHGEYALGKQVIEQLC--ELEPLNAENYVLLLNWHAGKGKLDMV 624
+E ++EG G+ G ++ L + P N Y +++ KG +
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSP-NVIAYNTMISGFCRKGSKEEA 557
Query: 625 DKIRETIRERGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGV 683
D + + ++E G P TL R ++ G + S KE+ S GF + T G+
Sbjct: 558 DSLLKKMKEDGPLPNSGTYNTLIRARLRD-GDREASAELIKEMRSC--GFAGDASTIGL 613
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 88/428 (20%), Positives = 170/428 (39%), Gaps = 21/428 (4%)
Query: 55 QVFDKSPEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAA 114
Q+ + + DT + TLIH +N A++ QM++
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 115 DFSLGKQLHTHAVKLALSSRA---HTLIALIHLYASLDDIAVAQTLFDKTAPFG--SDCW 169
D L L K + + +T+I + Y +DD A LF + G D +
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDD---ALNLFTEMDNKGIRPDVF 294
Query: 170 TFLAKLYVLEGMPR--SALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIA 227
T+ + + L R A L M+ G L + ++
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 228 VKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKD----VVSWTSMIRGCVQNGEL 283
+K ++ ++F +SL+ + + +A+ +FE M KD VV+++++I+G + +
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Query: 284 SEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSN 343
E MELFR M+ GL + V +T++ + + + +V GV ++L N
Sbjct: 415 EEGMELFREMSQRGLV--GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472
Query: 344 TLLKMYADCGASRDARLVFEQMPSKT----VVSWTSMIRGYVKKGGFNNEVFRLFRKMNS 399
LL G A +VFE + T + ++ MI G K G + + LF ++
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDG-WELFCNLSL 531
Query: 400 EGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIAC 459
+G+ P ++ ++++ R S + + + +G + N +I ++ G
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREA 591
Query: 460 ALNVFGEM 467
+ + EM
Sbjct: 592 SAELIKEM 599
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/360 (18%), Positives = 146/360 (40%), Gaps = 15/360 (4%)
Query: 62 EWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAADFSLGKQ 121
E D + +NT+I H A++ FT+M + +S +
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 122 LHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTA--PFGSDCWTF--LAKLYV 177
L + ++ ++ T ALI + + A+ L+D+ D +T+ L +
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 178 LEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVF 237
+ A +F M+ + +G ++ + GL G
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 238 ASNSLLKMYVDCGSMRDARLVFEKMPC----KDVVSWTSMIRGCVQNGELSEAMELFRRM 293
+L+ + +A++VF++M +++++ ++ G +NG+L++AM +F
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY- 493
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCG 353
L+ +++PD+ + ++ G ++ G E+ L GV +V+ NT++ + G
Sbjct: 494 -LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKG 552
Query: 354 ASRDARLVFEQM----PSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSI 409
+ +A + ++M P ++ ++IR ++ G L ++M S G A +I
Sbjct: 553 SKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA-ELIKEMRSCGFAGDASTI 611
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 147/328 (44%), Gaps = 25/328 (7%)
Query: 225 LIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCK----DVVSWTSMIRGCVQN 280
++ VK G E V N+L+ G + A + +M K DVV++ +++ G +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 281 GELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVL 340
G S+A + R M S+ PD+V + ++ V G+L +E++ ++++ V+ + +
Sbjct: 225 GRWSDAARMLRDMMKR--SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Query: 341 LSNTLLKMYADCGASRDARLVFEQMPSK----TVVSWTSMIRGYVKKGGFNNEVFRLFRK 396
N+++ G DA+ F+ M SK VV++ ++I G+ K +E +LF++
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKF-RMVDEGMKLFQR 341
Query: 397 MNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGA 456
M+ EG + ++++ ++ + +I +++ V DI ++ +G
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401
Query: 457 IACALNVFGEMNEKD----TISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYA 512
I AL F +M E + +++++MI G + + +LF +L P
Sbjct: 402 IESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTI 461
Query: 513 AALHACSTA----------RMFEEGRVC 530
L C RM EEG +C
Sbjct: 462 MILGLCKNGPRREADELIRRMKEEGIIC 489
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 109/239 (45%), Gaps = 11/239 (4%)
Query: 215 GSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCK----DVVSW 270
G+L + ++++ ++ ++ NS++ G + DA+ F+ M K +VV++
Sbjct: 260 GNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTY 319
Query: 271 TSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYL 330
++I G + + E M+LF+RM+ EG + D+ +T++ +G L+ +I ++
Sbjct: 320 NTLISGFCKFRMVDEGMKLFQRMSCEGFN--ADIFTYNTLIHGYCQVGKLRVALDIFCWM 377
Query: 331 VRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKT----VVSWTSMIRGYVKKGGF 386
V V D++ LL G A + F+ M +V++ MI G K
Sbjct: 378 VSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKV 437
Query: 387 NNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSN 445
+ + LF ++ EG+KP A + + ++ + + E+ + G+ +N +
Sbjct: 438 -EKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAED 495
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 119/242 (49%), Gaps = 11/242 (4%)
Query: 266 DVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGRE 325
DVV+ +S+I G Q + +A++L +M E + +PD+V+ +T++ IG + E
Sbjct: 138 DVVTVSSLINGFCQGNRVFDAIDLVSKM--EEMGFRPDVVIYNTIIDGSCKIGLVNDAVE 195
Query: 326 IHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK----TVVSWTSMIRGYV 381
+ + R+GV D + N+L+ G DA + M + V+++T++I +V
Sbjct: 196 LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFV 255
Query: 382 KKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDI 441
K+G F +E +L+ +M + P + +S++ +++ ++ G D+
Sbjct: 256 KEGKF-SEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 314
Query: 442 NVSNAVIDMYVKSGAIACALNVFGEMNEK----DTISWSMMIFGCSLHGQGKLGVDLFRQ 497
N +I+ + KS + +F EM ++ DTI+++ +I G G+ ++F +
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 374
Query: 498 LE 499
++
Sbjct: 375 MD 376
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 106/244 (43%), Gaps = 14/244 (5%)
Query: 169 WTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAV 228
+T + ++V EG A++L+ M M G + + + + + V
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 229 KLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCK----DVVSWTSMIRGCVQNGELS 284
G +V N+L+ + + + +F +M + D +++ ++I+G Q G
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 285 EAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNT 344
A E+F RM+ +P++ S +L M ++ + + ++ +E D+ N
Sbjct: 367 AAQEIFSRMD-----SRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 421
Query: 345 LLKMYADCGASRDARLVFEQMPSK----TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSE 400
++ G DA +F + K VVS+T+MI G+ +K ++ L+RKM +
Sbjct: 422 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDL-LYRKMQED 480
Query: 401 GLKP 404
GL P
Sbjct: 481 GLLP 484
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 192/444 (43%), Gaps = 30/444 (6%)
Query: 228 VKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMP----CKDVVSWTSMIRGCVQNGEL 283
+KLG E ++ NSLL + + DA + +M D ++ ++I G ++
Sbjct: 143 MKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRA 202
Query: 284 SEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSN 343
SEA+ L RM ++G +PDLV V+ G + + + + +E V++ N
Sbjct: 203 SEAVALVDRMVVKG--CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYN 260
Query: 344 TLLKMYADCGASRDARLVFEQMPSK----TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNS 399
T++ + DA +F +M +K VV++ S+IR G + ++ RL M
Sbjct: 261 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW-SDASRLLSDMIE 319
Query: 400 EGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIAC 459
+ P V+ S+++ A + +++ +++ ++ DI +++I+ + +
Sbjct: 320 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379
Query: 460 ALNVFGEMNEKD----TISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDN--IYAA 513
A ++F M KD ++++ +I G + G++LFR++ S+ L N Y
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM---SQRGLVGNTVTYTT 436
Query: 514 ALHACSTARMFEEGRVCFNHIRG----PMIAHCAQKVSLLARCGLFDEAMV---FIREQK 566
+H AR + ++ F + P I + + L G + A+V +++ K
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 567 IEQHPEVLRKLLEGCRIHGEYALGKQVIEQLC--ELEPLNAENYVLLLNWHAGKGKLDMV 624
+E ++EG G+ G + L ++P N Y +++ KG +
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP-NVVTYTTMMSGFCRKGLKEEA 555
Query: 625 DKIRETIRERGLKPKKACTWTLYR 648
D + ++E G P TL R
Sbjct: 556 DALFREMKEEGPLPDSGTYNTLIR 579
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 107/242 (44%), Gaps = 42/242 (17%)
Query: 215 GSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKD----VVSW 270
G L + ++ +K ++ ++F +SL+ + + +A+ +FE M KD VV++
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Query: 271 TSMIRGCVQNGELSEAMELFRRMNLEGL-------------------------------- 298
++I+G + + E MELFR M+ GL
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Query: 299 -SVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRD 357
V PD++ S +L G ++ + YL R+ +E D+ N +++ G D
Sbjct: 460 DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Query: 358 ARLVFEQMPSK----TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSIL 413
+F + K VV++T+M+ G+ +K G E LFR+M EG P + + ++++
Sbjct: 520 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRK-GLKEEADALFREMKEEGPLPDSGTYNTLI 578
Query: 414 PA 415
A
Sbjct: 579 RA 580
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
Query: 229 KLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCK----DVVSWTSMIRGCVQNGELS 284
++G+ V + N ++ G +++A + M K DV+S+++++ G + GEL
Sbjct: 239 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD 298
Query: 285 EAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNT 344
+ +L M +GL KP+ + +++ + I L E ++R G+ D ++ T
Sbjct: 299 KVWKLIEVMKRKGL--KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 345 LLKMYADCGASRDARLVFEQMPSK----TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSE 400
L+ + G R A F +M S+ V+++T++I G+ + G E +LF +M +
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM-VEAGKLFHEMFCK 415
Query: 401 GLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACA 460
GL+P +V+ + ++ + K +H ++++ G ++ +ID K G + A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 461 LNVFGEM 467
+ EM
Sbjct: 476 NELLHEM 482
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 123/286 (43%), Gaps = 42/286 (14%)
Query: 228 VKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKD----VVSWTSMIRGCVQNGEL 283
++ G+ + +L+ + G +R A F +M +D V+++T++I G Q G++
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 284 SEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSN 343
EA +LF M +GL +PD V + ++ G +K +H ++++ G
Sbjct: 403 VEAGKLFHEMFCKGL--EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC-------- 452
Query: 344 TLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLK 403
S VV++T++I G K+G ++ L +M GL+
Sbjct: 453 -----------------------SPNVVTYTTLIDGLCKEGDLDS-ANELLHEMWKIGLQ 488
Query: 404 PTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNV 463
P + +SI+ + + + ++ G G+ D ++D Y KSG + A +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 464 FGEMNEK----DTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAP 505
EM K +++++++ G LHG + G L + AP
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 122/282 (43%), Gaps = 16/282 (5%)
Query: 370 VVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIH 429
V+S+++++ GY + G + +V++L M +GLKP + SI+ RI E
Sbjct: 281 VISYSTVVNGYCRFGELD-KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 430 GYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK----DTISWSMMIFGCSLH 485
++R G+ D V +ID + K G I A F EM+ + D ++++ +I G
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 486 GQGKLGVDLFRQLERNSEAPLDDNIYAAALHA-CSTARMFEEGRVCFNHIRG---PMIAH 541
G LF ++ P D + ++ C M + RV + I+ P +
Sbjct: 400 GDMVEAGKLFHEMFCKGLEP-DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 542 CAQKVSLLARCGLFDEAMVFIREQ-KIEQHPEVL--RKLLEGCRIHGEYALGKQVIEQLC 598
+ L + G D A + E KI P + ++ G G +++ +
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF- 517
Query: 599 ELEPLNAE--NYVLLLNWHAGKGKLDMVDKIRETIRERGLKP 638
E LNA+ Y L++ + G++D +I + + +GL+P
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 143/329 (43%), Gaps = 15/329 (4%)
Query: 137 TLIALIHLYASLDDIAVAQTLFDKTAPFG----SDCWTFLAKLYVLEGMPRSALELFHRM 192
T A+I + + D+ A LF + G S +T L Y G + A + + M
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 193 VXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSM 252
+ G L ++ K+GL+ +F NS++ G++
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507
Query: 253 RDA-RLV--FEKMPCK-DVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVS 308
+A +LV FE D V++T+++ ++GE+ +A E+ + M +GL +P +V +
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL--QPTIVTFN 565
Query: 309 TVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK 368
++ + G L+ G ++ +++ G+ + N+L+K Y + A +++ M S+
Sbjct: 566 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625
Query: 369 TV----VSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKH 424
V ++ ++++G+ K E + LF++M +G + + S ++ +
Sbjct: 626 GVGPDGKTYENLVKGHCKARNMK-EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 425 GREIHGYLLRNGVEFDINVSNAVIDMYVK 453
RE+ + R G+ D + + D K
Sbjct: 685 AREVFDQMRREGLAADKEIFDFFSDTKYK 713
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
Query: 229 KLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCK----DVVSWTSMIRGCVQNGELS 284
++G+ V + N ++ G +++A + M K DV+S+++++ G + GEL
Sbjct: 239 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD 298
Query: 285 EAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNT 344
+ +L M +GL KP+ + +++ + I L E ++R G+ D ++ T
Sbjct: 299 KVWKLIEVMKRKGL--KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 345 LLKMYADCGASRDARLVFEQMPSK----TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSE 400
L+ + G R A F +M S+ V+++T++I G+ + G E +LF +M +
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM-VEAGKLFHEMFCK 415
Query: 401 GLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACA 460
GL+P +V+ + ++ + K +H ++++ G ++ +ID K G + A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 461 LNVFGEM 467
+ EM
Sbjct: 476 NELLHEM 482
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 123/286 (43%), Gaps = 42/286 (14%)
Query: 228 VKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKD----VVSWTSMIRGCVQNGEL 283
++ G+ + +L+ + G +R A F +M +D V+++T++I G Q G++
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 284 SEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSN 343
EA +LF M +GL +PD V + ++ G +K +H ++++ G
Sbjct: 403 VEAGKLFHEMFCKGL--EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC-------- 452
Query: 344 TLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLK 403
S VV++T++I G K+G ++ L +M GL+
Sbjct: 453 -----------------------SPNVVTYTTLIDGLCKEGDLDS-ANELLHEMWKIGLQ 488
Query: 404 PTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNV 463
P + +SI+ + + + ++ G G+ D ++D Y KSG + A +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 464 FGEMNEK----DTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAP 505
EM K +++++++ G LHG + G L + AP
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 122/282 (43%), Gaps = 16/282 (5%)
Query: 370 VVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIH 429
V+S+++++ GY + G + +V++L M +GLKP + SI+ RI E
Sbjct: 281 VISYSTVVNGYCRFGELD-KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 430 GYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK----DTISWSMMIFGCSLH 485
++R G+ D V +ID + K G I A F EM+ + D ++++ +I G
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 486 GQGKLGVDLFRQLERNSEAPLDDNIYAAALHA-CSTARMFEEGRVCFNHIRG---PMIAH 541
G LF ++ P D + ++ C M + RV + I+ P +
Sbjct: 400 GDMVEAGKLFHEMFCKGLEP-DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 542 CAQKVSLLARCGLFDEAMVFIREQ-KIEQHPEVL--RKLLEGCRIHGEYALGKQVIEQLC 598
+ L + G D A + E KI P + ++ G G +++ +
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF- 517
Query: 599 ELEPLNAE--NYVLLLNWHAGKGKLDMVDKIRETIRERGLKP 638
E LNA+ Y L++ + G++D +I + + +GL+P
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 143/329 (43%), Gaps = 15/329 (4%)
Query: 137 TLIALIHLYASLDDIAVAQTLFDKTAPFG----SDCWTFLAKLYVLEGMPRSALELFHRM 192
T A+I + + D+ A LF + G S +T L Y G + A + + M
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 193 VXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSM 252
+ G L ++ K+GL+ +F NS++ G++
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507
Query: 253 RDA-RLV--FEKMPCK-DVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVS 308
+A +LV FE D V++T+++ ++GE+ +A E+ + M +GL +P +V +
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL--QPTIVTFN 565
Query: 309 TVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK 368
++ + G L+ G ++ +++ G+ + N+L+K Y + A +++ M S+
Sbjct: 566 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625
Query: 369 TV----VSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKH 424
V ++ ++++G+ K E + LF++M +G + + S ++ +
Sbjct: 626 GVGPDGKTYENLVKGHCKARNMK-EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 425 GREIHGYLLRNGVEFDINVSNAVIDMYVK 453
RE+ + R G+ D + + D K
Sbjct: 685 AREVFDQMRREGLAADKEIFDFFSDTKYK 713
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 103/498 (20%), Positives = 193/498 (38%), Gaps = 26/498 (5%)
Query: 61 PEWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAADFSLGK 120
P +N L+ F L IS +M R + + SL
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 121 QLHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFG--SDCWTFLAKLY-- 176
L +KL TL +L++ Y I+ A L D+ G D TF ++
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 177 VLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEV 236
L A+ L RMV G + ++ +E +V
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 237 FASNSLLKMYVDCGSMRDARLVFEKMPCK----DVVSWTSMIRGCVQNGELSEAMELFRR 292
N+++ + DA +F++M K +VV+++S+I G S+A +L
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADC 352
M +E + P+LV + ++ G ++H +++ ++ D+ N+L+ +
Sbjct: 246 M-IEK-KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 353 GASRDARLVFEQMPSKTVV----SWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVS 408
A+ +FE M SK ++ ++I+G+ K + LFR+M+ GL V+
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT-ELFREMSHRGLVGDTVT 362
Query: 409 ISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMN 468
++++ + +++ ++ +GV DI + ++D +G + AL VF M
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 422
Query: 469 EK----DTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNI--YAAALHACSTAR 522
+ D ++ MI G G+ G DLF L P N+ Y + + R
Sbjct: 423 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP---NVVTYNTMISGLCSKR 479
Query: 523 MFEEGRVCFNHIR--GPM 538
+ +E ++ GP+
Sbjct: 480 LLQEAYALLKKMKEDGPL 497
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 123/264 (46%), Gaps = 17/264 (6%)
Query: 215 GSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVV----SW 270
G + +H +K ++ ++F NSL+ + + A+ +FE M KD ++
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 328
Query: 271 TSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYL 330
++I+G ++ + + ELFR M+ GL D V +T++ G + +++ +
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMSHRGLV--GDTVTYTTLIQGLFHDGDCDNAQKVFKQM 386
Query: 331 VRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK----TVVSWTSMIRGYVKKGGF 386
V +GV D++ + LL + G A VF+ M + +T+MI G K G
Sbjct: 387 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 446
Query: 387 NNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLR---NGVEFDINV 443
++ + LF ++ +G+KP V+ ++++ + S + +E + L + +G D
Sbjct: 447 DDG-WDLFCSLSLKGVKPNVVTYNTMISG---LCSKRLLQEAYALLKKMKEDGPLPDSGT 502
Query: 444 SNAVIDMYVKSGAIACALNVFGEM 467
N +I +++ G A + + EM
Sbjct: 503 YNTLIRAHLRDGDKAASAELIREM 526
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 123/264 (46%), Gaps = 15/264 (5%)
Query: 230 LGLEGEVFASNSLLKMYVDCGSM----RDARLVFEKMPCKDVVSWTSMIRGCVQNGELSE 285
LGLE V NSL+ Y G + R RL+ E+ ++VV++TS+I+G + G + E
Sbjct: 255 LGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEE 314
Query: 286 AMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTL 345
A +F + + L D M ++ G ++ +H ++ GV + + N+L
Sbjct: 315 AEHVFELLKEKKLV--ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSL 372
Query: 346 LKMYADCGASRDARLVFEQMPSKTVV----SWTSMIRGYVKKGGFNNEVFRLFRKMNSEG 401
+ Y G +A +F +M ++ ++ +++ GY + G+ +E +L +M +
Sbjct: 373 INGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYC-RAGYVDEALKLCDQMCQKE 431
Query: 402 LKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACAL 461
+ PT ++ + +L RI + + +L+ GV D + +++ K G A+
Sbjct: 432 VVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAM 491
Query: 462 ----NVFGEMNEKDTISWSMMIFG 481
NV DTI+ ++MI G
Sbjct: 492 KLWENVLARGLLTDTITLNVMISG 515
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 117/248 (47%), Gaps = 23/248 (9%)
Query: 242 LLKMYVDCGSMRDARLVFEKMP----CKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEG 297
+LK+Y + G +++A VF+ M ++S S++ V+ GE A+ ++ +M
Sbjct: 161 ILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQM--IS 218
Query: 298 LSVKPDLVMVSTVLPVCGMIGSLKHG----REIHGYLVRNGVECDVLLSNTLLKMYADCG 353
V PD+ S V+ G++ +E L G+E +V+ N+L+ YA G
Sbjct: 219 FEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSL---GLELNVVTYNSLINGYAMIG 275
Query: 354 ----ASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSI 409
+R RL+ E+ S+ VV++TS+I+GY KK G E +F + + L
Sbjct: 276 DVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKK-GLMEEAEHVFELLKEKKLVADQHMY 334
Query: 410 SSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNE 469
++ R + +H ++ GV + + N++I+ Y KSG + A +F MN+
Sbjct: 335 GVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMND 394
Query: 470 KDTISWSM 477
WS+
Sbjct: 395 -----WSL 397
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 118/264 (44%), Gaps = 11/264 (4%)
Query: 213 MMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDVVS--- 269
M+G + V + + G+ V SL+K Y G M +A VFE + K +V+
Sbjct: 273 MIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQH 332
Query: 270 -WTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHG 328
+ ++ G + G++ +A+ + N+ + V+ + + ++++ G L +I
Sbjct: 333 MYGVLMDGYCRTGQIRDAVRVHD--NMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFS 390
Query: 329 YLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK----TVVSWTSMIRGYVKKG 384
+ ++ D NTL+ Y G +A + +QM K TV+++ +++GY + G
Sbjct: 391 RMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIG 450
Query: 385 GFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVS 444
F ++V L++ M G+ +S S++L A ++ ++ +L G+ D
Sbjct: 451 AF-HDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITL 509
Query: 445 NAVIDMYVKSGAIACALNVFGEMN 468
N +I K + A + +N
Sbjct: 510 NVMISGLCKMEKVNEAKEILDNVN 533
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/332 (20%), Positives = 135/332 (40%), Gaps = 15/332 (4%)
Query: 129 LALSSRAHTLIALIHLYASLDDIA----VAQTLFDKTAPFGSDCWTFLAKLYVLEGMPRS 184
L L T +LI+ YA + D+ V + + ++ +T L K Y +G+
Sbjct: 255 LGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEE 314
Query: 185 ALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLK 244
A +F + G +R VH +++G+ NSL+
Sbjct: 315 AEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLIN 374
Query: 245 MYVDCGSMRDARLVFEKMP----CKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSV 300
Y G + +A +F +M D ++ +++ G + G + EA++L +M + V
Sbjct: 375 GYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQK--EV 432
Query: 301 KPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARL 360
P ++ + +L IG+ + +++ GV D + +TLL+ G +A
Sbjct: 433 VPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMK 492
Query: 361 VFEQMPSKTVVSWT----SMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPAC 416
++E + ++ +++ T MI G K N E + +N KP + ++
Sbjct: 493 LWENVLARGLLTDTITLNVMISGLCKMEKVN-EAKEILDNVNIFRCKPAVQTYQALSHGY 551
Query: 417 GRIASHKHGREIHGYLLRNGVEFDINVSNAVI 448
++ + K + Y+ R G+ I + N +I
Sbjct: 552 YKVGNLKEAFAVKEYMERKGIFPTIEMYNTLI 583
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 119/270 (44%), Gaps = 13/270 (4%)
Query: 270 WTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGY 329
+ ++I + + EA LF RM GL +P+ V S ++ + G L G
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGL--RPNDVTYSILIDMFCRRGKLDTALSFLGE 427
Query: 330 LVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK----TVVSWTSMIRGYVKKGG 385
+V G++ V N+L+ + G A +M +K TVV++TS++ GY KG
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Query: 386 FNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSN 445
N+ RL+ +M +G+ P+ + +++L R + ++ + V+ + N
Sbjct: 488 I-NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYN 546
Query: 446 AVIDMYVKSGAIACALNVFGEMNEK----DTISWSMMIFGCSLHGQGKLGVDLFRQLERN 501
+I+ Y + G ++ A EM EK DT S+ +I G L GQ L +
Sbjct: 547 VMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKG 606
Query: 502 SEAPLDDNIYAAALHA-CSTARMFEEGRVC 530
+ L++ Y LH C ++ E VC
Sbjct: 607 N-CELNEICYTGLLHGFCREGKLEEALSVC 635
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 118/277 (42%), Gaps = 12/277 (4%)
Query: 231 GLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDV----VSWTSMIRGCVQNGELSEA 286
G+ ++ +LL G +RDA +F +M +V V++ MI G + G++S+A
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 287 MELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLL 346
E + M +G + PD ++ + G + L + E + + LL
Sbjct: 562 FEFLKEMTEKG--IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLL 619
Query: 347 KMYADCGASRDARLVFEQMPSKTV----VSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGL 402
+ G +A V ++M + V V + +I G +K F L ++M+ GL
Sbjct: 620 HGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD-RKLFFGLLKEMHDRGL 678
Query: 403 KPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALN 462
KP V +S++ A + K I ++ G + AVI+ K+G + A
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEV 738
Query: 463 VFGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLE 499
+ +M ++ + + +GC L K VD+ + +E
Sbjct: 739 LCSKMQPVSSVP-NQVTYGCFLDILTKGEVDMQKAVE 774
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 120/259 (46%), Gaps = 12/259 (4%)
Query: 266 DVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGRE 325
D+V++TS+I G + EAM + +M G +KPD+VM +T++ G + +
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG--IKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 326 IHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKT----VVSWTSMIRGYV 381
+ + G+ DV++ +L+ + G RDA + M + V+++ ++I +V
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 382 KKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDI 441
K+G F + L+ +M + P + +S++ R++ + G D+
Sbjct: 259 KEGKF-LDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDV 317
Query: 442 NVSNAVIDMYVKSGAIACALNVFGEMNEK----DTISWSMMIFGCSLHGQGKLGVDLFRQ 497
++I+ + K + A+ +F EM++K +TI+++ +I G G+ + ++F
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377
Query: 498 LERNSEAPLDDNIYAAALH 516
+ P + Y LH
Sbjct: 378 MVSRGVPP-NIRTYNVLLH 395
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 16/265 (6%)
Query: 167 DCWTF--LAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVH 224
D TF L +V EG A EL++ M+ M G + + R +
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Query: 225 LIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCK----DVVSWTSMIRGCVQN 280
+ G +V A SL+ + C + DA +F +M K + +++T++I+G Q
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV 365
Query: 281 GELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVR---NGVEC 337
G+ + A E+F M G V P++ + +L G +K I + + +GV
Sbjct: 366 GKPNVAQEVFSHMVSRG--VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAP 423
Query: 338 DVLLSNTLLKMYADCGASRDARLVFEQMPSKTV----VSWTSMIRGYVKKGGFNNEVFRL 393
++ N LL G A +VFE M + + +++T +I+G K G N V L
Sbjct: 424 NIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAV-NL 482
Query: 394 FRKMNSEGLKPTAVSISSILPACGR 418
F + S+G+KP V+ ++++ R
Sbjct: 483 FCSLPSKGVKPNVVTYTTMISGLFR 507
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 157/348 (45%), Gaps = 22/348 (6%)
Query: 228 VKLGLEGEVFASNSLLKMYVDCGSMRDARLV---FEKMPCK-DVVSWTSMIRGCVQNGEL 283
+KLG+E ++ ++SL+ + S++DA V EKM K DVV T +I +N +
Sbjct: 5 MKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLV 64
Query: 284 SEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHG-REIHGYLVRNGVECDVLLS 342
A+E+ +RM G+S P++V S+++ G L R +H + + +V+
Sbjct: 65 VPALEVLKRMKDRGIS--PNVVTYSSLITGLCKSGRLADAERRLHE-MDSKKINPNVITF 121
Query: 343 NTLLKMYADCGASRDARLVFEQMPSKT----VVSWTSMIRGYVKKGGFNNEVFRLFRKMN 398
+ L+ YA G V++ M + V +++S+I G +E ++ M
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRV-DEAIKMLDLMI 180
Query: 399 SEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIA 458
S+G P V+ S++ + + G ++ + + GV + N +I Y ++G I
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKID 240
Query: 459 CALNVFGEMNEKDTI----SWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAA 514
AL VFG M I S+++++ G +G+ + + F +++ + LD Y
Sbjct: 241 LALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQK-TRNDLDIITYTIM 299
Query: 515 LHACSTARMFEEGRVCFNHIR----GPMIAHCAQKVSLLARCGLFDEA 558
+H A M +E F ++ P ++ L R G+ EA
Sbjct: 300 IHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 347
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 100/472 (21%), Positives = 191/472 (40%), Gaps = 69/472 (14%)
Query: 266 DVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGRE 325
DV +T+ I + G++ EA++LF +M G V P++V +TV+ GM G
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG--VAPNVVTFNTVIDGLGMCGRYDEAFM 316
Query: 326 IHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK----TVVSWTSMIRGYV 381
+V G+E ++ + L+K DA V ++M K V+ + ++I ++
Sbjct: 317 FKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 376
Query: 382 KKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDI 441
+ G N + + M S+GL T+ + ++++ + + + +L G +
Sbjct: 377 EAGSLNKAI-EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 442 NVSNAVIDMYVKSGAIACALNVFGEMNEKDTIS----WSMMIFGCSLHGQGKLGVDLFRQ 497
+VI + AL GEM ++ + +I G HG+ ++L+ Q
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 498 LERNSEAPLDDNIYAAALHA-CSTARMFEEGRVCFNHI-RGPMIAHCAQKVSLLARCGL- 554
N +D A LH C ++ E R+ + RG ++ + + CG
Sbjct: 496 F-LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 555 -FDEAMVFIRE-----------------------QKIEQH-------------PEVLRK- 576
DEA +F+ E K+E+ P+V
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 577 -LLEGCRIHGEYALGKQVIEQLC--ELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRE 633
+++GC G++ +++ ++P N Y L+ + G+L M ++RE ++
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQP-NTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 634 RGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEP 685
+G+ P A +L + G +S + ++ EEMR EG+EP
Sbjct: 674 KGISPNSATYTSLIK------GMSIISRVEEAKL------LFEEMRMEGLEP 713
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 19/282 (6%)
Query: 238 ASNSLLKMYVDCGSMRDA----RLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
SN+LL + G + +A + + + D VS+ ++I GC +L EA M
Sbjct: 507 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 566
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGY--LVRNGVECDVLLSNTLLKMYAD 351
GL KPD S + +CG+ K I + RNG+ DV + ++
Sbjct: 567 VKRGL--KPDNYTYSIL--ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 622
Query: 352 CGASRDARLVFEQMPSKTV----VSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAV 407
+ + + F++M SK V V + +IR Y + G + L M +G+ P +
Sbjct: 623 AERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS-MALELREDMKHKGISPNSA 681
Query: 408 SISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEM 467
+ +S++ I+ + + + + G+E ++ A+ID Y K G + + EM
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 468 NEKDT----ISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAP 505
+ K+ I++++MI G + G L ++ P
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 783
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 171/448 (38%), Gaps = 67/448 (14%)
Query: 215 GSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDA-RLVFEKMPCKDVV---SW 270
GSL + ++ + V GL N+L+K Y G +A RL+ E + V S+
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 271 TSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGR-----E 325
TS+I + A+ M L +S P +++T++ G KHG+ E
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMS--PGGGLLTTLIS-----GLCKHGKHSKALE 491
Query: 326 IHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTV----VSWTSMIRGYV 381
+ + G D SN LL + G +A + +++ + VS+ ++I G
Sbjct: 492 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551
Query: 382 KKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGY--LLRNGVEF 439
K +E F +M GLKP + S ++ CG +K I + RNG+
Sbjct: 552 GKKKL-DEAFMFLDEMVKRGLKPDNYTYSILI--CGLFNMNKVEEAIQFWDDCKRNGMLP 608
Query: 440 DINVSNAVIDMYVKSGAIACALNVFGEMNEK----DTISWSMMIFGCSLHGQGKLGVDLF 495
D+ + +ID K+ F EM K +T+ ++ +I G+ + ++L
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668
Query: 496 RQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR----GPMIAHCAQKVSLLAR 551
++ +P + Y + + S EE ++ F +R P + H + +
Sbjct: 669 EDMKHKGISP-NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 727
Query: 552 CGLFDEAMVFIREQKIEQ-HPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVL 610
G + +RE + HP N Y +
Sbjct: 728 LGQMVKVECLLREMHSKNVHP--------------------------------NKITYTV 755
Query: 611 LLNWHAGKGKLDMVDKIRETIRERGLKP 638
++ +A G + ++ +RE+G+ P
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVP 783
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 100/472 (21%), Positives = 191/472 (40%), Gaps = 69/472 (14%)
Query: 266 DVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGRE 325
DV +T+ I + G++ EA++LF +M G V P++V +TV+ GM G
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG--VAPNVVTFNTVIDGLGMCGRYDEAFM 316
Query: 326 IHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK----TVVSWTSMIRGYV 381
+V G+E ++ + L+K DA V ++M K V+ + ++I ++
Sbjct: 317 FKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 376
Query: 382 KKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDI 441
+ G N + + M S+GL T+ + ++++ + + + +L G +
Sbjct: 377 EAGSLNKAI-EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 442 NVSNAVIDMYVKSGAIACALNVFGEMNEKDTIS----WSMMIFGCSLHGQGKLGVDLFRQ 497
+VI + AL GEM ++ + +I G HG+ ++L+ Q
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 498 LERNSEAPLDDNIYAAALHA-CSTARMFEEGRVCFNHI-RGPMIAHCAQKVSLLARCGL- 554
N +D A LH C ++ E R+ + RG ++ + + CG
Sbjct: 496 F-LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 555 -FDEAMVFIRE-----------------------QKIEQH-------------PEVLRK- 576
DEA +F+ E K+E+ P+V
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 577 -LLEGCRIHGEYALGKQVIEQLC--ELEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRE 633
+++GC G++ +++ ++P N Y L+ + G+L M ++RE ++
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQP-NTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 634 RGLKPKKACTWTLYREKVHVFGTGDVSHPRKKEICSALQGFMEEMRTEGVEP 685
+G+ P A +L + G +S + ++ EEMR EG+EP
Sbjct: 674 KGISPNSATYTSLIK------GMSIISRVEEAKL------LFEEMRMEGLEP 713
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 19/282 (6%)
Query: 238 ASNSLLKMYVDCGSMRDA----RLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRM 293
SN+LL + G + +A + + + D VS+ ++I GC +L EA M
Sbjct: 507 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 566
Query: 294 NLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGY--LVRNGVECDVLLSNTLLKMYAD 351
GL KPD S + +CG+ K I + RNG+ DV + ++
Sbjct: 567 VKRGL--KPDNYTYSIL--ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 622
Query: 352 CGASRDARLVFEQMPSKTV----VSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAV 407
+ + + F++M SK V V + +IR Y + G + L M +G+ P +
Sbjct: 623 AERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS-MALELREDMKHKGISPNSA 681
Query: 408 SISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEM 467
+ +S++ I+ + + + + G+E ++ A+ID Y K G + + EM
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 468 NEKDT----ISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAP 505
+ K+ I++++MI G + G L ++ P
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 783
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 171/448 (38%), Gaps = 67/448 (14%)
Query: 215 GSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDA-RLVFEKMPCKDVV---SW 270
GSL + ++ + V GL N+L+K Y G +A RL+ E + V S+
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 271 TSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGR-----E 325
TS+I + A+ M L +S P +++T++ G KHG+ E
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMS--PGGGLLTTLIS-----GLCKHGKHSKALE 491
Query: 326 IHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTV----VSWTSMIRGYV 381
+ + G D SN LL + G +A + +++ + VS+ ++I G
Sbjct: 492 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551
Query: 382 KKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGY--LLRNGVEF 439
K +E F +M GLKP + S ++ CG +K I + RNG+
Sbjct: 552 GKKKL-DEAFMFLDEMVKRGLKPDNYTYSILI--CGLFNMNKVEEAIQFWDDCKRNGMLP 608
Query: 440 DINVSNAVIDMYVKSGAIACALNVFGEMNEK----DTISWSMMIFGCSLHGQGKLGVDLF 495
D+ + +ID K+ F EM K +T+ ++ +I G+ + ++L
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668
Query: 496 RQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR----GPMIAHCAQKVSLLAR 551
++ +P + Y + + S EE ++ F +R P + H + +
Sbjct: 669 EDMKHKGISP-NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 727
Query: 552 CGLFDEAMVFIREQKIEQ-HPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVL 610
G + +RE + HP N Y +
Sbjct: 728 LGQMVKVECLLREMHSKNVHP--------------------------------NKITYTV 755
Query: 611 LLNWHAGKGKLDMVDKIRETIRERGLKP 638
++ +A G + ++ +RE+G+ P
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVP 783
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 140/283 (49%), Gaps = 15/283 (5%)
Query: 228 VKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMP----CKDVVSWTSMIRGCVQNGEL 283
V++G + + N+L+ G + DA ++ ++M + V++ ++ ++G+
Sbjct: 185 VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 244
Query: 284 SEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSN 343
+ AMEL R+M E ++K D V S ++ GSL + + + G + D++ N
Sbjct: 245 ALAMELLRKM--EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302
Query: 344 TLLKMYADCGASRDA----RLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNS 399
TL+ + + G D R + ++ S VV+++ +I +VK+G E +L ++M
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLR-EADQLLKEMMQ 361
Query: 400 EGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIAC 459
G+ P ++ +S++ + + ++ ++ G + DI N +I+ Y K+ I
Sbjct: 362 RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDD 421
Query: 460 ALNVFGEMNEK----DTISWSMMIFGCSLHGQGKLGVDLFRQL 498
L +F EM+ + +T++++ ++ G G+ ++ LF+++
Sbjct: 422 GLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 124/292 (42%), Gaps = 15/292 (5%)
Query: 169 WTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAV 228
++ L +V EG R A +L M+ L + + + +
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 229 KLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDV----VSWTSMIRGCVQNGELS 284
G + ++ N L+ Y + D +F +M + V V++ ++++G Q+G+L
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 285 EAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNT 344
A +LF+ M V+PD+V +L G L+ EI G + ++ +E D+ +
Sbjct: 456 VAKKLFQEM--VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI--Y 511
Query: 345 LLKMYADCGASR--DARLVFEQMPSKTVV----SWTSMIRGYVKKGGFNNEVFRLFRKMN 398
++ ++ C AS+ DA +F +P K V ++ MI +K + LFRKM
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADI-LFRKMT 570
Query: 399 SEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDM 450
EG P ++ + ++ A E+ + +G D++ VI+M
Sbjct: 571 EEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINM 622
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 104/224 (46%), Gaps = 11/224 (4%)
Query: 266 DVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGRE 325
D V + +++ G +SEA+EL RM G KP L+ ++T++ + G +
Sbjct: 157 DTVIFNTLLNGLCLECRVSEALELVDRMVEMGH--KPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 326 IHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTV----VSWTSMIRGYV 381
+ +V G + + + +L + G + A + +M + + V ++ +I G
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 382 KKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDI 441
K G +N F LF +M +G K ++ ++++ G ++ +++ + ++
Sbjct: 275 KDGSLDN-AFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 333
Query: 442 NVSNAVIDMYVKSGAIACALNVFGEMNEK----DTISWSMMIFG 481
+ +ID +VK G + A + EM ++ +TI+++ +I G
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDG 377
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 149/343 (43%), Gaps = 21/343 (6%)
Query: 241 SLLKMYVDCGSMRDARLVFEKMP----CKDVVSWTSMIRGCVQNGELSEAMELFRRMNLE 296
+LL +Y G + A +FE+M V ++T +I+G + G + EA ++ M +
Sbjct: 273 TLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRD 332
Query: 297 GLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGAS- 355
GL+ PD+V ++ ++ + G +G ++ + + V+ NT++K + A
Sbjct: 333 GLT--PDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHV 390
Query: 356 RDARLVFEQMPSKTV----VSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISS 411
+ F++M + +V +++ +I GY K + L +M+ +G P + S
Sbjct: 391 SEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALL-LLEEMDEKGFPPCPAAYCS 449
Query: 412 ILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK- 470
++ A G+ ++ E+ L N V +I + K G ++ A+++F EM +
Sbjct: 450 LINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQG 509
Query: 471 ---DTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEG 527
D +++ ++ G G L R++E N D N + L+ + +
Sbjct: 510 SGPDVYAYNALMSGMVKAGMINEANSLLRKMEENG-CRADINSHNIILNGFARTGVPRRA 568
Query: 528 RVCFNHIRGPMIAHCAQKVSLLARC----GLFDEAMVFIREQK 566
F I+ I + L C G+F+EA +RE K
Sbjct: 569 IEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMK 611
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/450 (20%), Positives = 180/450 (40%), Gaps = 93/450 (20%)
Query: 219 QGRDVHLIAVKLGLEGEVFAS----NSLLKMYVDCGSMRDARLVFEKM------PCKDVV 268
Q VH + ++ EG+ F ++L+ Y G A +F++M P + +
Sbjct: 212 QHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKI- 270
Query: 269 SWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHG 328
+T+++ + G++ +A++LF M G S P + + ++ G G + +
Sbjct: 271 -YTTLLGIYFKVGKVEKALDLFEEMKRAGCS--PTVYTYTELIKGLGKAGRVDEAYGFYK 327
Query: 329 YLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMP----SKTVVSWTSMIRGYVKKG 384
++R+G+ DV+ N L+ + G + VF +M + TVVS+ ++I+ +
Sbjct: 328 DMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESK 387
Query: 385 GFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVS 444
+EV F KM ++ + P+ EF ++
Sbjct: 388 AHVSEVSSWFDKMKADSVSPS--------------------------------EFTYSI- 414
Query: 445 NAVIDMYVKSGAIACALNVFGEMNEKD----TISWSMMIFGCSLHGQGKLGVDLFRQLER 500
+ID Y K+ + AL + EM+EK ++ +I + + +LF++L+
Sbjct: 415 --LIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKE 472
Query: 501 NSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIR----GPMIAHCAQKVSLLARCGLFD 556
N + +YA + E FN ++ GP + +S + + G+ +
Sbjct: 473 NF-GNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMIN 531
Query: 557 EAMVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHA 616
EA +R K+E++ GCR +N+ N ++LN A
Sbjct: 532 EANSLLR--KMEEN---------GCRAD------------------INSHN--IILNGFA 560
Query: 617 GKGKLDMVDKIRETIRERGLKPKKACTWTL 646
G ++ ETI+ G+KP TL
Sbjct: 561 RTGVPRRAIEMFETIKHSGIKPDGVTYNTL 590
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
Query: 270 WTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGY 329
+ MI+ + G+LSEA++LF M +G PD+ + ++ G + +
Sbjct: 482 YAVMIKHFGKCGKLSEAVDLFNEMKNQGSG--PDVYAYNALMSGMVKAGMINEANSLLRK 539
Query: 330 LVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTV----VSWTSMIRGYVKKGG 385
+ NG D+ N +L +A G R A +FE + + V++ +++ + G
Sbjct: 540 MEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGM 599
Query: 386 FNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHK 423
F E R+ R+M +G + A++ SSIL A G + K
Sbjct: 600 FE-EAARMMREMKDKGFEYDAITYSSILDAVGNVDHEK 636
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 117/248 (47%), Gaps = 11/248 (4%)
Query: 266 DVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGRE 325
D V++ ++I G +G ++A L R M + P+++ + ++ G+L R
Sbjct: 218 DAVTYNTLISGLSNSGRWTDAARLLRDMVKR--KIDPNVIFFTALIDTFVKEGNLLEARN 275
Query: 326 IHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK----TVVSWTSMIRGYV 381
++ ++R V +V N+L+ + G DA+ +F+ M SK VV++ ++I G+
Sbjct: 276 LYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFC 335
Query: 382 KKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDI 441
K + + +LF +M +GL A + ++++ + +++ ++ GV DI
Sbjct: 336 KSKRVEDGM-KLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 394
Query: 442 NVSNAVIDMYVKSGAIACALNVFGEMNEK----DTISWSMMIFGCSLHGQGKLGVDLFRQ 497
N ++D +G I AL + ++ + D I+++++I G + K LFR
Sbjct: 395 VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRS 454
Query: 498 LERNSEAP 505
L R P
Sbjct: 455 LTRKGVKP 462
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 103/212 (48%), Gaps = 11/212 (5%)
Query: 215 GSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCK----DVVSW 270
G+L + R+++ ++ + VF NSL+ + G + DA+ +F+ M K DVV++
Sbjct: 268 GNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTY 327
Query: 271 TSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYL 330
++I G ++ + + M+LF M +GL D +T++ G L +++ +
Sbjct: 328 NTLITGFCKSKRVEDGMKLFCEMTYQGLV--GDAFTYNTLIHGYCQAGKLNVAQKVFNRM 385
Query: 331 VRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK----TVVSWTSMIRGYVKKGGF 386
V GV D++ N LL + G A ++ E + ++++ +I+G +
Sbjct: 386 VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKL 445
Query: 387 NNEVFRLFRKMNSEGLKPTAVSISSILPACGR 418
E + LFR + +G+KP A++ +++ R
Sbjct: 446 -KEAWCLFRSLTRKGVKPDAIAYITMISGLCR 476
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 108/218 (49%), Gaps = 11/218 (5%)
Query: 269 SWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHG 328
S+ SM+ G+ EA+E+ +++ +G V D +M +TV G + + H ++
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKG--VVTDTMMYNTVFSALGKLKQISHIHDLFE 466
Query: 329 YLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMP----SKTVVSWTSMIRGYVKKG 384
+ ++G D+ N L+ + G +A +FE++ ++S+ S+I K G
Sbjct: 467 KMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNG 526
Query: 385 GFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVS 444
+ R F++M +GL P V+ S+++ G+ + + +L G + +I
Sbjct: 527 DVDEAHVR-FKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTY 585
Query: 445 NAVIDMYVKSGAIACALNVFGEMNEK----DTISWSMM 478
N ++D K+G A A++++ +M ++ D+I+++++
Sbjct: 586 NILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 100/220 (45%), Gaps = 45/220 (20%)
Query: 214 MGSLRQGRDVHLIAVKLGLEG---EVFASNSLLKMYVDCGSMRDARLVFEKMP---CK-D 266
+G L+Q +H + K+ +G ++F N L+ + G + +A +FE++ CK D
Sbjct: 452 LGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPD 511
Query: 267 VVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREI 326
++S+ S+I +NG++ EA F+ M +GL+ PD+V ST++ G ++ +
Sbjct: 512 IISYNSLINCLGKNGDVDEAHVRFKEMQEKGLN--PDVVTYSTLMECFGKTERVEMAYSL 569
Query: 327 HGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGF 386
++ G + +++ N LL DC ++K G
Sbjct: 570 FEEMLVKGCQPNIVTYNILL----DC----------------------------LEKNGR 597
Query: 387 NNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGR 426
E L+ KM +GL P +++ + + R+ S HG+
Sbjct: 598 TAEAVDLYSKMKQQGLTPDSITYTVL----ERLQSVSHGK 633
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/457 (21%), Positives = 178/457 (38%), Gaps = 70/457 (15%)
Query: 240 NSLLKMYVDCGSMRDARLVFEKM-----PCKDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
N+L+ +Y G + DA +F +M P D V++ +MI C +G LSEA L ++M
Sbjct: 309 NTLIDLYGKAGRLNDAANLFSEMLKSGVPI-DTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIH--------------------------- 327
+G+S PD + +L + G ++ E +
Sbjct: 368 EKGIS--PDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKM 425
Query: 328 --------GYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSM--- 376
+ RN + D +++MY + G A+ +FE+ V+S T++
Sbjct: 426 VAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAV 485
Query: 377 IRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNG 436
I Y +KG + + K N G + + + ++ A G+ H+ + + G
Sbjct: 486 IDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQG 545
Query: 437 VEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKDTI----SWSMMIFGCSLHGQGKLGV 492
D N++ M + A + EM + +++ MI G V
Sbjct: 546 TWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAV 605
Query: 493 DLFRQLERNSEAPLDDNIYAAALH----------ACSTARMFEEGRVCFNHIRGPMIAHC 542
DL+ +E+ P ++ +Y + ++ A RM EE V NHI +
Sbjct: 606 DLYEAMEKTGVKP-NEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKA 664
Query: 543 AQKVSLLARCGLFDEAM-VFIREQKIEQHPEVL--RKLLEGCRIHGEYALGKQVIEQLCE 599
KV G +EA V+ + + E P+V +L C G + + + L E
Sbjct: 665 YSKV------GCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALRE 718
Query: 600 LEPLNAENYVLLLNWHAGKGKLDMVDKIRETIRERGL 636
+ ++ ++ + G G LD ++ E +RE GL
Sbjct: 719 KGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGL 755
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 143/358 (39%), Gaps = 41/358 (11%)
Query: 137 TLIALIHLYASLDDIAVAQTLFDKTAPFG--SDCWTFLAKL--YVLEGMPRSALELFHRM 192
T +L + A +D + AQ + + G C T+ A + YV G+ A++L+ M
Sbjct: 552 TYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAM 611
Query: 193 VXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSM 252
G + + + + G++ SL+K Y G +
Sbjct: 612 EKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCL 671
Query: 253 RDARLVFEKMP----CKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVS 308
+AR V++KM DV + SM+ C G +SEA +F + +G D++ +
Sbjct: 672 EEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTC---DVISFA 728
Query: 309 TVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQM--P 366
T++ + +G L E+ + +G+ D N ++ YA G + +F +M
Sbjct: 729 TMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVE 788
Query: 367 SKTVVSWTSM--IRGYVKKGGFNNEVFRLFRKMNSEGLKP------TAVSISSI------ 412
K ++ W + + +KKGG +E + +E KP TA S++
Sbjct: 789 RKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEA-KPLATPAITATLFSAMGLYAYA 847
Query: 413 LPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK 470
L +C + S + RE Y NAVI Y SG I AL + M EK
Sbjct: 848 LESCQELTSGEIPREHFAY-------------NAVIYTYSASGDIDMALKAYMRMQEK 892
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 128/302 (42%), Gaps = 27/302 (8%)
Query: 240 NSLLKMYVDCGSMRDARLVFEKM---PCKD-VVSWTSMIRGCVQNGELSEAMELFRRMNL 295
NSL +M + +A+ + +M CK ++ +MI V+ G LS+A++L+ M
Sbjct: 554 NSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEK 613
Query: 296 EGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGAS 355
G VKP+ V+ +++ G ++ + + +GV+ + ++ +L+K Y+ G
Sbjct: 614 TG--VKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCL 671
Query: 356 RDARLVFEQMPSK----TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISS 411
+AR V+++M V + SM+ G +E +F + +G +S ++
Sbjct: 672 EEARRVYDKMKDSEGGPDVAASNSML-SLCADLGIVSEAESIFNALREKG-TCDVISFAT 729
Query: 412 ILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEM--NE 469
++ + E+ + +G+ D N V+ Y G ++ +F EM
Sbjct: 730 MMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVER 789
Query: 470 KDTISWSMMIFGCSLHGQGKLGVDLFRQLER--NSEAPLDD-----------NIYAAALH 516
K + W +L +G + + QL+ N PL +YA AL
Sbjct: 790 KLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALE 849
Query: 517 AC 518
+C
Sbjct: 850 SC 851
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 108/546 (19%), Positives = 210/546 (38%), Gaps = 98/546 (17%)
Query: 176 YVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGS---LRQGRDVHLIAVKLGL 232
Y+ EG P AL++F +M+ S + R+V VK+G+
Sbjct: 141 YLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGV 200
Query: 233 EGEVFASNSLLKMYVDCGSMRDARLVFEKMPCK-----DVVSWTSMIRGCVQNGELSEAM 287
V N L+ Y G + DA + E+M + D V++ ++++ + G LS+
Sbjct: 201 SLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLK 260
Query: 288 ELFRRMNLEGL---------------------------------SVKPDLVMVSTVLPVC 314
EL M GL +V PDL + ++
Sbjct: 261 ELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGL 320
Query: 315 GMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMP-------- 366
GS++ G E+ + ++ DV+ NTL+ + G S +AR + EQM
Sbjct: 321 CNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQ 380
Query: 367 --------------------------------SKTVVSWTSMIRGYVKKGGFNNEVFRLF 394
S +V++ ++I+ Y+K G + +
Sbjct: 381 VTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSG-ALEMM 439
Query: 395 RKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKS 454
R+M +G+K +++++IL A + + + G D +I + +
Sbjct: 440 REMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFRE 499
Query: 455 GAIACALNVFGEMNE---KDTIS-WSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDNI 510
+ AL ++ EM + T+S ++ +I G HG+ +L ++ F +L + P D
Sbjct: 500 EKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTF 559
Query: 511 YAAALHACSTARM---FEEGRVCFNHIRGPMIAHCAQKVSLLARCGLFDEAMVF----IR 563
+ L C R+ FE H P C ++ L + G+ ++A+ F I
Sbjct: 560 NSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE 619
Query: 564 EQKIE--QHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKL 621
E++++ + ++ + ++ Y L ++ E+ E + +++ LL GKL
Sbjct: 620 EREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLL---MEDGKL 676
Query: 622 DMVDKI 627
D++
Sbjct: 677 SETDEL 682
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/452 (20%), Positives = 180/452 (39%), Gaps = 29/452 (6%)
Query: 215 GSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKM---PCK-DVVSW 270
G LR+ ++ G E N+LL+++ G +A V ++M C D V++
Sbjct: 295 GLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTY 354
Query: 271 TSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYL 330
++ V+ G EA + M +G V P+ + +TV+ G G ++ +
Sbjct: 355 NELVAAYVRAGFSKEAAGVIEMMTKKG--VMPNAITYTTVIDAYGKAGKEDEALKLFYSM 412
Query: 331 VRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSK----TVVSWTSMIRGYVKKGGF 386
G + N +L + S + + M S +W +M+ G
Sbjct: 413 KEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGM 471
Query: 387 NNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNA 446
+ V R+FR+M S G +P + ++++ A GR S +++G + R G + NA
Sbjct: 472 DKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNA 531
Query: 447 VIDMYVKSGAIACALNVFGEMNEK----DTISWSMMIFGCSLHGQGKLGVDLFRQLERNS 502
+++ + G NV +M K S+S+M+ C G LG++ +
Sbjct: 532 LLNALARKGDWRSGENVISDMKSKGFKPTETSYSLML-QCYAKGGNYLGIERIENRIKEG 590
Query: 503 EAPLDDNIYAAALHACSTARMFEEGRVCFN----HIRGPMIAHCAQKVSLLARCGLFDEA 558
+ + L A R F H P + +S+ R ++D+A
Sbjct: 591 QIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQA 650
Query: 559 ---MVFIREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQL--CELEPLNAENYVLLLN 613
+ IRE + L++ GE +++++ L +L+P + +Y ++
Sbjct: 651 EGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKP-DLVSYNTVIK 709
Query: 614 WHAGKGKLDMVDKIRETIRERGLKPKKACTWT 645
+G + ++ + ERG++P C +T
Sbjct: 710 GFCRRGLMQEAVRMLSEMTERGIRP---CIFT 738
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 8/176 (4%)
Query: 338 DVLLSNTLLKMYADCGASRDARLVFEQM----PSKTVVSWTSMIRGYVKKGGFNNEVFRL 393
DV T+L Y+ G A +FE+M PS T+V++ ++ + K G ++ +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 394 FRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVK 453
+M S+GLK + S++L AC R + +E L G E NA++ ++ K
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 454 SGAIACALNVFGEMNEK----DTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAP 505
+G AL+V EM E D+++++ ++ G K + + + P
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMP 384
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 120/281 (42%), Gaps = 19/281 (6%)
Query: 232 LEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCK----DVVSWTSMIRGCVQNGELSEAM 287
++ ++ N+++K Y G + A M + D +++ +MI+ C + + +
Sbjct: 253 IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCV 312
Query: 288 ELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLK 347
L++ M+ +G+ V P S V+ G L G + ++R G + +V + L+
Sbjct: 313 ALYQEMDEKGIQVPPH--AFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID 370
Query: 348 MYADCGASRDARLVFEQMPSK----TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLK 403
YA G+ DA + +M + VV+++ ++ G K G E F +GL
Sbjct: 371 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVE-EALDYFHTCRFDGLA 429
Query: 404 PTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNV 463
++ SS++ G+ + + G D NA+ID + K + A+ +
Sbjct: 430 INSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIAL 489
Query: 464 FGEMNEKDTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEA 504
F M E++ ++ + L G +F++ RN EA
Sbjct: 490 FKRMEEEEGCDQTVYTYTILLSG-------MFKE-HRNEEA 522
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 21/261 (8%)
Query: 215 GSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCK----DVVSW 270
G L +G V ++ G + V L+ Y GS+ DA + +M + DVV++
Sbjct: 341 GKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 400
Query: 271 TSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYL 330
+ ++ G +NG + EA++ F +GL++ + S+++ G G + + +
Sbjct: 401 SVVVNGLCKNGRVEEALDYFHTCRFDGLAINS--MFYSSLIDGLGKAGRVDEAERLFEEM 458
Query: 331 VRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMP-----SKTVVSWTSMIRGYVKKGG 385
G D N L+ + +A +F++M +TV ++T ++ G K+
Sbjct: 459 SEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHR 518
Query: 386 FNNEVFRLFRKMNSEGLKPTAV---SISSILPACGRIASHKHGREIHGYLLRNGVEFDIN 442
N E +L+ M +G+ PTA ++S+ L G++A +I L GV D
Sbjct: 519 -NEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVA---RACKILDELAPMGVILDAA 574
Query: 443 VSNAVIDMYVKSGAI--ACAL 461
+ +I+ K+G I AC L
Sbjct: 575 CED-MINTLCKAGRIKEACKL 594
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 139/340 (40%), Gaps = 55/340 (16%)
Query: 236 VFASNSLLKMYVDCGSMRDARLVFEKMPCKDV----VSWTSMIRGCVQNGELSEAMELFR 291
V A+N+L+K + G + + V+ KM + ++ ++ G V + A +F
Sbjct: 187 VSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFE 246
Query: 292 RMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKM-YA 350
M E +KPD+V +T++ G + E + G E D + T+++ YA
Sbjct: 247 VM--ESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYA 304
Query: 351 DC-----------------------------GASRDARL-----VFEQMPSK----TVVS 372
D G ++ +L VFE M K V
Sbjct: 305 DSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAI 364
Query: 373 WTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYL 432
+T +I GY K G + + RL +M EG KP V+ S ++ + + +
Sbjct: 365 YTVLIDGYAKSGSVEDAI-RLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTC 423
Query: 433 LRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNEK----DTISWSMMIFGCSLHGQG 488
+G+ + +++ID K+G + A +F EM+EK D+ ++ +I + H +
Sbjct: 424 RFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKV 483
Query: 489 KLGVDLFRQLERNSEAPLDDNIYAAALHACSTARMFEEGR 528
+ LF+++E E D +Y + + MF+E R
Sbjct: 484 DEAIALFKRMEE--EEGCDQTVYT---YTILLSGMFKEHR 518
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 129/268 (48%), Gaps = 16/268 (5%)
Query: 229 KLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCK---DVVSWTSMIRGCVQNGELSE 285
K GLE + + LL GS+++A VFE M K ++ +TS++ G + G+L E
Sbjct: 195 KYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLME 254
Query: 286 AMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTL 345
A E+ +M GL +PD+V+ + +L G + ++ + + G E +V L
Sbjct: 255 AKEVLVQMKEAGL--EPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVL 312
Query: 346 LKMYADCGASR---DARLVFEQMP----SKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMN 398
++ A C + +A VF +M +V++T++I G+ K G ++ + + M
Sbjct: 313 IQ--ALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFC-KWGMIDKGYSVLDDMR 369
Query: 399 SEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIA 458
+G+ P+ V+ I+ A + + E+ + R G D+ + N VI + K G +
Sbjct: 370 KKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVK 429
Query: 459 CALNVFGEMNEKDTISWSMMIFGCSLHG 486
A+ ++ EM E + +S + F ++G
Sbjct: 430 EAVRLWNEM-EANGLSPGVDTFVIMING 456
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/447 (20%), Positives = 187/447 (41%), Gaps = 25/447 (5%)
Query: 62 EWDTLAWNTLIHTHLSNNHFPLAISTFTQMLRHAVXXXXXXXXXXXXASRLAADFSLGKQ 121
E ++ A+N L++ + + A+ QML V A + K+
Sbjct: 160 EVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKE 219
Query: 122 LHTHAVKLALSSRAHTLIALIHLYASLDDIAVAQTLFDKTAPFGSDCWTFLAKLYVLEGM 181
L++ V + + T L+ + A A + + G++ + L L V
Sbjct: 220 LYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACC 279
Query: 182 PRSALELFHRMVXXXXXXXXXXXXXXXXXXXMMGSLRQGRDVHLIAVKL-----GLEGEV 236
L + + ++ ++ S++QG I +K G+ V
Sbjct: 280 KTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNV 339
Query: 237 FASNSLLKMYVDCGSMRDARLVFEKM----PCKDVVSWTSMIRGCVQNGELSEAMELFRR 292
A+ SL+ + + A ++F+KM P + V+++ +I +NGE+ +A+E +++
Sbjct: 340 VAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKK 399
Query: 293 MNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVE---CDVLLSNTLLKMY 349
M + GL+ P + V T+ + G + KH + L E +V + NT+L
Sbjct: 400 MEVLGLT--PSVFHVHTI--IQGWLKGQKHEEALK--LFDESFETGLANVFVCNTILSWL 453
Query: 350 ADCGASRDARLVFEQMPSK----TVVSWTSMIRGYVKKGGFNNEVFRL-FRKMNSEGLKP 404
G + +A + +M S+ VVS+ +++ G+ ++ N ++ R+ F + +GLKP
Sbjct: 454 CKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQK--NMDLARIVFSNILEKGLKP 511
Query: 405 TAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVF 464
+ S ++ C R ++ E+ ++ + +E + V +I+ K G + A +
Sbjct: 512 NNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELL 571
Query: 465 GEMNEKDTISWSMMIFGCSLHGQGKLG 491
M E+ + S M + + G K G
Sbjct: 572 ANMIEEKRLCVSCMSYNSIIDGFFKEG 598
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 110/255 (43%), Gaps = 38/255 (14%)
Query: 255 ARLVFEKMPCKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVC 314
A ++ EK C +S+ S+I G + GE+ A+ + M G+S P+++ ++++
Sbjct: 572 ANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGIS--PNVITYTSLMNGL 629
Query: 315 GMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWT 374
+ E+ + GV+ D+ ++
Sbjct: 630 CKNNRMDQALEMRDEMKNKGVKLDI-------------------------------PAYG 658
Query: 375 SMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLR 434
++I G+ K+ + LF ++ EGL P+ +S++ + + +++ +L+
Sbjct: 659 ALIDGFCKRSNMES-ASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLK 717
Query: 435 NGVEFDINVSNAVIDMYVKSGAIACALNVFGEMNE----KDTISWSMMIFGCSLHGQGKL 490
+G+ D+ +ID +K G + A ++ EM D I +++++ G S GQ
Sbjct: 718 DGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVK 777
Query: 491 GVDLFRQLERNSEAP 505
V +F ++++N+ P
Sbjct: 778 VVKMFEEMKKNNVTP 792
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 85/512 (16%), Positives = 199/512 (38%), Gaps = 41/512 (8%)
Query: 157 LFDKTAPFG----SDCWTFLAKLYVLEGMPRSALELFHRMVXXXXXXXXXXXXXXXXXXX 212
L D FG S + +L Y + A+++ ++M+
Sbjct: 150 LVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALV 209
Query: 213 MMGSLRQGRDVHLIAVKLGLEGEVFASNSLLKMYVDCGSMRDAR---------LVFEKMP 263
SL + ++++ V +G++G+ + L++ S+R+ + E+
Sbjct: 210 QRNSLTEAKELYSRMVAIGVDGDNVTTQLLMR-----ASLREEKPAEALEVLSRAIERGA 264
Query: 264 CKDVVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHG 323
D + ++ ++ C + +L+ A L R M + L V S +L G++
Sbjct: 265 EPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQ-GNMDDA 323
Query: 324 REIHGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQM----PSKTVVSWTSMIRG 379
+ ++ +G+ +V+ + +L+ + A ++F++M PS V+++ +I
Sbjct: 324 IRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIE- 382
Query: 380 YVKKGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEF 439
+ +K G + ++KM GL P+ + +I+ + H+ ++ G+
Sbjct: 383 WFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA- 441
Query: 440 DINVSNAVIDMYVKSGAIACALNVFGEMNEK----DTISWSMMIFGCSLHGQGKLGVDLF 495
++ V N ++ K G A + +M + + +S++ ++ G L +F
Sbjct: 442 NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVF 501
Query: 496 RQLERNSEAPLDDNIYAAALHACSTARMFEEGRVCFNHIRGPMI----AHCAQKVSLLAR 551
+ P ++ Y+ + C + NH+ I ++ L +
Sbjct: 502 SNILEKGLKP-NNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCK 560
Query: 552 CGLFDEAMVF----IREQKIEQHPEVLRKLLEGCRIHGEYALGKQVIEQLCE--LEPLNA 605
G +A I E+++ +++G GE E++C + P N
Sbjct: 561 VGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISP-NV 619
Query: 606 ENYVLLLNWHAGKGKLDMVDKIRETIRERGLK 637
Y L+N ++D ++R+ ++ +G+K
Sbjct: 620 ITYTSLMNGLCKNNRMDQALEMRDEMKNKGVK 651
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/447 (20%), Positives = 184/447 (41%), Gaps = 62/447 (13%)
Query: 228 VKLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMP----CKDVVSWTSMIRGCVQNGEL 283
+KLG + NSLL + + +A + ++M D V++T+++ G Q+ +
Sbjct: 137 MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA 196
Query: 284 SEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSN 343
SEA+ L RM ++G +PDLV V+ G + + + +E DV++ N
Sbjct: 197 SEAVALVERMVVKG--CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYN 254
Query: 344 TLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLK 403
T++ D ++ M ++ F LF KM ++G+K
Sbjct: 255 TII----------DGLCKYKHM----------------------DDAFDLFNKMETKGIK 282
Query: 404 PTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNV 463
P + + ++ + +L + D+ NA+ID +VK G + A +
Sbjct: 283 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Query: 464 FGEMNEK-----DTISWSMMIFGCSLHGQGKLGVDLFRQLERNSEAPLDDN--IYAAALH 516
+ EM + D ++++ +I G + + + G+++FR++ S+ L N Y +H
Sbjct: 343 YDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM---SQRGLVGNTVTYTTLIH 399
Query: 517 ACSTARMFEEGRVCFNHIRG----PMIAHCAQKVSLLARCGLFDEAMVFI-----REQKI 567
AR + ++ F + P I + L G + A+V R+ K+
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 568 E--QHPEVLRKLLEGCRIHGEYALGKQVIEQLCELEPLNAENYVLLLNWHAGKGKLDMVD 625
+ + ++ L + ++ + L + L ++P N Y +++ KG + D
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSL--SLKGVKP-NVVTYTTMMSGFCRKGLKEEAD 516
Query: 626 KIRETIRERGLKPKKACTWTLYREKVH 652
+ ++E G P TL R ++
Sbjct: 517 ALFVEMKEDGPLPNSGTYNTLIRARLR 543
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 112/237 (47%), Gaps = 12/237 (5%)
Query: 240 NSLLKMYVDCGSMRDARLVFEKMP----C-KDVVSWTSMIRGCVQNGELSEAMELFRRMN 294
N+L+ +V G + +A ++++M C DVV++ ++I+G + + E ME+FR M+
Sbjct: 324 NALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMS 383
Query: 295 LEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNTLLKMYADCGA 354
GL + V +T++ + + + +V +GV D++ N LL + G
Sbjct: 384 QRGLV--GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441
Query: 355 SRDARLVFEQMPSK----TVVSWTSMIRGYVKKGGFNNEVFRLFRKMNSEGLKPTAVSIS 410
A +VFE M + +V++T+MI K G + + LF ++ +G+KP V+ +
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG-WDLFCSLSLKGVKPNVVTYT 500
Query: 411 SILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACALNVFGEM 467
+++ R + + + +G + N +I ++ G A + + EM
Sbjct: 501 TMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 136/318 (42%), Gaps = 16/318 (5%)
Query: 229 KLGLEGEVFASNSLLKMYVDCGSMRDARLVFEKMPCKDV----VSWTSMIRGCVQNGELS 284
K G+ + + L+ YV+ G AR+V ++M DV ++ ++ G GE
Sbjct: 367 KRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQ 426
Query: 285 EAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIHGYLVRNGVECDVLLSNT 344
+ ++ + M + + VKPD + V+ G L H ++ G+E D + NT
Sbjct: 427 KTFQVLKEM--KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNT 484
Query: 345 LLKMYADCGASRDARLVFEQMPSKT----VVSWTSMIRGYVKKGGFNNEVFRLFRKMNSE 400
L+ + G A +FE M + ++ MI Y + + +++ RL KM S+
Sbjct: 485 LIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERW-DDMKRLLGKMKSQ 543
Query: 401 GLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDINVSNAVIDMYVKSGAIACA 460
G+ P V+ ++++ G+ E + G++ + NA+I+ Y + G A
Sbjct: 544 GILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQA 603
Query: 461 LNVFGEMNEKDTISWSMMIFGCSLH--GQGKLGVDLFRQLERNSEAPLDDNI--YAAALH 516
+N F M D + S++ ++ G+ + + F L+ E + ++ Y +
Sbjct: 604 VNAFRVMT-SDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMK 662
Query: 517 ACSTARMFEEGRVCFNHI 534
A F++ V + +
Sbjct: 663 ALIRVDKFQKVPVVYEEM 680
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 87/208 (41%), Gaps = 7/208 (3%)
Query: 267 VVSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREI 326
+ S+I +G EA LF + G +KP + +L G LK +
Sbjct: 304 TATLVSIISALADSGRTLEAEALFEELRQSG--IKPRTRAYNALLKGYVKTGPLKDAESM 361
Query: 327 HGYLVRNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVS----WTSMIRGYVK 382
+ + GV D + L+ Y + G AR+V ++M + V ++ ++ G+
Sbjct: 362 VSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRD 421
Query: 383 KGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNGVEFDIN 442
+G + + F++ ++M S G+KP + ++ G+ H +L G+E D
Sbjct: 422 RGEWQ-KTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRV 480
Query: 443 VSNAVIDMYVKSGAIACALNVFGEMNEK 470
N +ID + K G A +F M +
Sbjct: 481 TWNTLIDCHCKHGRHIVAEEMFEAMERR 508
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 121/297 (40%), Gaps = 39/297 (13%)
Query: 268 VSWTSMIRGCVQNGELSEAMELFRRMNLEGLSVKPDLVMVSTVLPVCGMIGSLKHGREIH 327
+++ ++I C +N ++ +A+ L +M +G + D V S V I SL +I
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDG--YQSDFVNYSLV------IQSLTRSNKID 249
Query: 328 GYLV--------RNGVECDVLLSNTLLKMYADCGASRDARLVFEQMPSKTVVSWTSMIRG 379
++ R+ +E DV L N ++ +A G A + + + + T+ +
Sbjct: 250 SVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVS 309
Query: 380 YVK---KGGFNNEVFRLFRKMNSEGLKPTAVSISSILPACGRIASHKHGREIHGYLLRNG 436
+ G E LF ++ G+KP + +++L + K + + + G
Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369
Query: 437 VEFDINVSNAVIDMYVKSGAIACALNVFGEMNEKD----TISWSMMIFGCSLHGQGKLGV 492
V D + + +ID YV +G A V EM D + +S ++ G G+ +
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 493 DLFRQLERNSEAPLDDNIYAAAL----------HACST-ARMFEEG----RVCFNHI 534
+ ++++ P D Y + HA +T RM EG RV +N +
Sbjct: 430 QVLKEMKSIGVKP-DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTL 485