Miyakogusa Predicted Gene

Lj6g3v1018490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1018490.1 tr|C1EI16|C1EI16_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_64422
,52.44,2e-17,METHIONINE 10+ HOMOLOG,NULL; UNCHARACTERIZED,NULL;
S-adenosyl-L-methionine-dependent
methyltransfera,NODE_54389_length_688_cov_35.824127.path2.1
         (91 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G56120.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   138   8e-34
AT4G27340.1 | Symbols:  | Met-10+ like family protein | chr4:136...    52   1e-07

>AT3G56120.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr3:20823243-20826357 FORWARD LENGTH=468
          Length = 468

 Score =  138 bits (347), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 62/89 (69%), Positives = 75/89 (84%)

Query: 1   MNLPASAVQFLDAFRGLIQKKNWKGCLPWIHCYCFIRATETPESLLAEAESRINARILDP 60
           MNLPASA+QFLD+F  +IQKK WKG LP IHCYCFIRA+ET E ++AEAE+ +   I DP
Sbjct: 379 MNLPASALQFLDSFSNVIQKKYWKGPLPLIHCYCFIRASETTEFIIAEAETALKFHIEDP 438

Query: 61  IFHRVRDVAPNKAMFCLSFRLPVACVSED 89
           +FH+VRDVAPNKAMFCLSFRLP AC+ ++
Sbjct: 439 VFHKVRDVAPNKAMFCLSFRLPEACLKQE 467


>AT4G27340.1 | Symbols:  | Met-10+ like family protein |
           chr4:13687366-13690370 REVERSE LENGTH=619
          Length = 619

 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 2/84 (2%)

Query: 1   MNLPASAVQFLDAFRGLIQKKNWKGCL--PWIHCYCFIRATETPESLLAEAESRINARIL 58
           MNLP  A + LDAFRG+   ++    L  P IH Y F +A++            ++   +
Sbjct: 522 MNLPKDAAESLDAFRGVYNDRHRDEGLSFPTIHVYGFSKASDPEFDFHERIRIALSEVAV 581

Query: 59  DPIFHRVRDVAPNKAMFCLSFRLP 82
           D    +VR VAP K M C SF LP
Sbjct: 582 DVKMRKVRLVAPGKWMLCASFILP 605