Miyakogusa Predicted Gene
- Lj6g3v1008200.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1008200.1 Non Chatacterized Hit- tr|A5BC54|A5BC54_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,42.22,0.00003,zf-RING_2,Zinc finger, RING-type; zf-RING_3,NULL; no
description,Zinc finger, RING/FYVE/PHD-type; RI,CUFF.58758.1
(298 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G56580.3 | Symbols: | RING/U-box superfamily protein | chr3:... 191 5e-49
AT3G56580.1 | Symbols: | RING/U-box superfamily protein | chr3:... 191 5e-49
AT3G56580.2 | Symbols: | RING/U-box superfamily protein | chr3:... 191 5e-49
AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 187 1e-47
AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 187 1e-47
AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 187 1e-47
AT2G39720.1 | Symbols: RHC2A | RING-H2 finger C2A | chr2:1656750... 135 5e-32
AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 130 1e-30
AT3G19950.1 | Symbols: | RING/U-box superfamily protein | chr3:... 130 1e-30
AT1G60360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 130 1e-30
AT3G10815.1 | Symbols: | RING/U-box superfamily protein | chr3:... 128 4e-30
AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 124 1e-28
AT1G55530.1 | Symbols: | RING/U-box superfamily protein | chr1:... 112 4e-25
AT3G13430.3 | Symbols: | RING/U-box superfamily protein | chr3:... 105 3e-23
AT3G13430.2 | Symbols: | RING/U-box superfamily protein | chr3:... 105 3e-23
AT3G13430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 105 3e-23
AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |... 100 1e-21
AT4G26400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 99 5e-21
AT4G26400.2 | Symbols: | RING/U-box superfamily protein | chr4:... 99 5e-21
AT5G01980.1 | Symbols: | RING/U-box superfamily protein | chr5:... 92 6e-19
AT3G60080.1 | Symbols: | RING/U-box superfamily protein | chr3:... 87 1e-17
AT1G68180.1 | Symbols: | RING/U-box superfamily protein | chr1:... 87 1e-17
AT2G44330.1 | Symbols: | RING/U-box superfamily protein | chr2:... 83 2e-16
AT5G08139.1 | Symbols: | RING/U-box superfamily protein | chr5:... 79 3e-15
AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein | c... 79 3e-15
AT3G02340.1 | Symbols: | RING/U-box superfamily protein | chr3:... 79 4e-15
AT5G15820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 78 7e-15
AT1G26800.1 | Symbols: | RING/U-box superfamily protein | chr1:... 77 1e-14
AT1G14200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 77 2e-14
AT5G64920.1 | Symbols: CIP8 | COP1-interacting protein 8 | chr5:... 75 4e-14
AT5G60820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 74 9e-14
AT1G18780.1 | Symbols: | RING/U-box superfamily protein | chr1:... 62 5e-10
AT5G02750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 62 7e-10
AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 60 1e-09
AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 60 1e-09
AT4G10150.1 | Symbols: | RING/U-box superfamily protein | chr4:... 60 1e-09
AT4G35840.1 | Symbols: | RING/U-box superfamily protein | chr4:... 60 2e-09
AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 | chr3:... 60 2e-09
AT5G52140.1 | Symbols: | RING/U-box superfamily protein | chr5:... 59 4e-09
AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 59 4e-09
AT4G24015.1 | Symbols: | RING/U-box superfamily protein | chr4:... 58 7e-09
AT2G29840.1 | Symbols: | RING/U-box superfamily protein | chr2:... 58 7e-09
AT4G10160.1 | Symbols: | RING/U-box superfamily protein | chr4:... 58 9e-09
AT2G42360.1 | Symbols: | RING/U-box superfamily protein | chr2:... 57 1e-08
AT1G33480.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 1e-08
AT2G44578.1 | Symbols: | RING/U-box superfamily protein | chr2:... 57 1e-08
AT1G04790.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 2e-08
AT3G58720.1 | Symbols: | RING/U-box superfamily protein | chr3:... 57 2e-08
AT3G58720.2 | Symbols: | RING/U-box superfamily protein | chr3:... 57 2e-08
AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein | ... 57 2e-08
AT1G73760.1 | Symbols: | RING/U-box superfamily protein | chr1:... 56 3e-08
AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 56 3e-08
AT1G18770.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 4e-08
AT2G42350.1 | Symbols: | RING/U-box superfamily protein | chr2:... 55 5e-08
AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein | ... 55 5e-08
AT5G36001.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 5e-08
AT5G66070.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 5e-08
AT1G17970.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 5e-08
AT1G74410.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 5e-08
AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein | ... 55 6e-08
AT5G66070.2 | Symbols: | RING/U-box superfamily protein | chr5:... 55 6e-08
AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 55 7e-08
AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogene... 55 7e-08
AT3G30460.1 | Symbols: | RING/U-box superfamily protein | chr3:... 55 8e-08
AT3G13228.1 | Symbols: | RING/U-box superfamily protein | chr3:... 55 8e-08
AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein | c... 55 8e-08
AT5G01880.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 1e-07
AT2G03000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 54 1e-07
AT2G44581.1 | Symbols: | RING/U-box superfamily protein | chr2:... 54 1e-07
AT2G34990.1 | Symbols: | RING/U-box superfamily protein | chr2:... 54 1e-07
AT1G80400.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 1e-07
AT2G35000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 54 1e-07
AT5G57750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 1e-07
AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 54 2e-07
AT4G40070.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 2e-07
AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 54 2e-07
AT3G15070.2 | Symbols: | RING/U-box superfamily protein | chr3:... 54 2e-07
AT3G15070.1 | Symbols: | RING/U-box superfamily protein | chr3:... 54 2e-07
AT1G21960.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 2e-07
AT5G45290.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 2e-07
AT2G15580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 53 2e-07
AT4G30400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 53 2e-07
AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 53 2e-07
AT2G18670.1 | Symbols: | RING/U-box superfamily protein | chr2:... 53 2e-07
AT5G54990.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 3e-07
AT5G10650.2 | Symbols: | RING/U-box superfamily protein | chr5:... 53 3e-07
AT5G10650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 3e-07
AT4G12190.1 | Symbols: | RING/U-box superfamily protein | chr4:... 53 3e-07
AT2G27940.1 | Symbols: | RING/U-box superfamily protein | chr2:... 52 3e-07
AT1G35330.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 3e-07
AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region t... 52 4e-07
AT1G72220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 4e-07
AT1G22500.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 5e-07
AT5G66160.2 | Symbols: RMR1 | receptor homology region transmemb... 52 5e-07
AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 52 5e-07
AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 52 5e-07
AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 | chr3:... 52 5e-07
AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B | chr4:6906066... 52 6e-07
AT1G72200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 6e-07
AT4G15975.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 6e-07
AT5G42940.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 7e-07
AT4G31450.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 7e-07
AT1G53190.2 | Symbols: | RING/U-box superfamily protein | chr1:... 52 7e-07
AT1G53190.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 7e-07
AT3G20395.1 | Symbols: | RING/U-box superfamily protein | chr3:... 51 7e-07
AT2G20030.1 | Symbols: | RING/U-box superfamily protein | chr2:... 51 8e-07
AT3G61180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 51 8e-07
AT5G42200.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 8e-07
AT5G45290.2 | Symbols: | RING/U-box superfamily protein | chr5:... 51 8e-07
AT3G15740.1 | Symbols: | RING/U-box superfamily protein | chr3:... 51 8e-07
AT5G24870.2 | Symbols: | RING/U-box superfamily protein | chr5:... 51 9e-07
AT5G24870.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 9e-07
AT4G32600.1 | Symbols: | RING/U-box superfamily protein | chr4:... 51 9e-07
AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 51 1e-06
AT4G05350.1 | Symbols: | RING/U-box superfamily protein | chr4:... 51 1e-06
AT3G60966.1 | Symbols: | RING/U-box superfamily protein | chr3:... 51 1e-06
AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein | c... 51 1e-06
AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily p... 51 1e-06
AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive... 51 1e-06
AT1G49850.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 1e-06
AT3G10910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 1e-06
AT1G53820.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 1e-06
AT2G25410.1 | Symbols: | RING/U-box superfamily protein | chr2:... 50 2e-06
AT4G28890.1 | Symbols: | RING/U-box superfamily protein | chr4:... 50 2e-06
AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A | chr4:6907777... 50 2e-06
AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A | chr2:7576640... 50 2e-06
AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zi... 50 2e-06
AT5G07225.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 2e-06
AT2G15530.3 | Symbols: | RING/U-box superfamily protein | chr2:... 50 3e-06
AT2G15530.2 | Symbols: | RING/U-box superfamily protein | chr2:... 50 3e-06
AT2G15530.1 | Symbols: | RING/U-box superfamily protein | chr2:... 50 3e-06
AT5G17600.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 3e-06
AT1G23980.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 3e-06
AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:1771336... 49 3e-06
AT3G16090.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 3e-06
AT5G06490.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 3e-06
AT4G12140.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 4e-06
AT3G14970.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 4e-06
AT4G12210.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 4e-06
AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 49 5e-06
AT4G26580.2 | Symbols: | RING/U-box superfamily protein | chr4:... 49 5e-06
AT4G26580.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 5e-06
AT1G04360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 5e-06
AT5G55970.2 | Symbols: | RING/U-box superfamily protein | chr5:... 49 5e-06
AT5G55970.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 5e-06
AT1G74620.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 6e-06
AT5G05280.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 6e-06
AT3G03550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 48 7e-06
AT1G53010.1 | Symbols: | RING/U-box superfamily protein | chr1:... 48 7e-06
AT5G53910.1 | Symbols: | RING/U-box superfamily protein | chr5:... 48 7e-06
AT3G18930.2 | Symbols: | RING/U-box superfamily protein | chr3:... 48 8e-06
AT3G18930.1 | Symbols: | RING/U-box superfamily protein | chr3:... 48 8e-06
AT5G53110.1 | Symbols: | RING/U-box superfamily protein | chr5:... 48 8e-06
AT1G28040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 48 8e-06
AT2G46495.1 | Symbols: | RING/U-box superfamily protein | chr2:... 48 9e-06
AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVE... 48 1e-05
>AT3G56580.3 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 191 bits (485), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 155/300 (51%), Gaps = 52/300 (17%)
Query: 10 MSSV-ATYWCYTCRQPILLAGRDVTCPYCDGSFVQELNERQGIAPQHGFSSLDPQAPDIF 68
MSS+ T+WC+ C++ + L RD C YC G FV+E++ I P ++
Sbjct: 1 MSSIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEID----IGPSRAHRDVERD----- 51
Query: 69 DAIHSVIGQRGSAPRIGLRDAVDSYMRRRMAG-NRDPNFDIRRGSGS------------- 114
P L +A ++MR R+A + D R GS
Sbjct: 52 -------------PTFDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIF 98
Query: 115 -GLVPEQTWGVFSSGSYLIVHDQGPGFSLPTGSSRGVPRRVEFGMGPGLEQLIEQLNV-N 172
G P + G +S V+ PG + G++ G ++ GPGLE+LIEQL+
Sbjct: 99 GGQAPFRLAGGDNSSVEAFVNGAAPGIGIARGTNAG-----DYFFGPGLEELIEQLSSGT 153
Query: 173 DRLGPAPASRSSIDAMPTIKIAQAHLRS-DSHCPVCQERFELGSKAREMPCNHIYHSDCI 231
GP PA +SSIDA+PTIKI Q HL+S DSHCPVC++ FEL S+A++MPC+HIYHSDCI
Sbjct: 154 HHRGPPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCI 213
Query: 232 VPWLVQHNSCPVCRIELPPEXXXXXXXXXXXXXXXXXXXXENSQLNHRRRNPLSFLWPFR 291
VPWLVQHNSCPVCR ELP N + N RRRN S LWPFR
Sbjct: 214 VPWLVQHNSCPVCRKELPSRGSSSSTQSSQNRST-------NGRENSRRRNIFSNLWPFR 266
>AT3G56580.1 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 191 bits (485), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 155/300 (51%), Gaps = 52/300 (17%)
Query: 10 MSSV-ATYWCYTCRQPILLAGRDVTCPYCDGSFVQELNERQGIAPQHGFSSLDPQAPDIF 68
MSS+ T+WC+ C++ + L RD C YC G FV+E++ I P ++
Sbjct: 1 MSSIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEID----IGPSRAHRDVERD----- 51
Query: 69 DAIHSVIGQRGSAPRIGLRDAVDSYMRRRMAG-NRDPNFDIRRGSGS------------- 114
P L +A ++MR R+A + D R GS
Sbjct: 52 -------------PTFDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIF 98
Query: 115 -GLVPEQTWGVFSSGSYLIVHDQGPGFSLPTGSSRGVPRRVEFGMGPGLEQLIEQLNV-N 172
G P + G +S V+ PG + G++ G ++ GPGLE+LIEQL+
Sbjct: 99 GGQAPFRLAGGDNSSVEAFVNGAAPGIGIARGTNAG-----DYFFGPGLEELIEQLSSGT 153
Query: 173 DRLGPAPASRSSIDAMPTIKIAQAHLRS-DSHCPVCQERFELGSKAREMPCNHIYHSDCI 231
GP PA +SSIDA+PTIKI Q HL+S DSHCPVC++ FEL S+A++MPC+HIYHSDCI
Sbjct: 154 HHRGPPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCI 213
Query: 232 VPWLVQHNSCPVCRIELPPEXXXXXXXXXXXXXXXXXXXXENSQLNHRRRNPLSFLWPFR 291
VPWLVQHNSCPVCR ELP N + N RRRN S LWPFR
Sbjct: 214 VPWLVQHNSCPVCRKELPSRGSSSSTQSSQNRST-------NGRENSRRRNIFSNLWPFR 266
>AT3G56580.2 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 191 bits (485), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 155/300 (51%), Gaps = 52/300 (17%)
Query: 10 MSSV-ATYWCYTCRQPILLAGRDVTCPYCDGSFVQELNERQGIAPQHGFSSLDPQAPDIF 68
MSS+ T+WC+ C++ + L RD C YC G FV+E++ I P ++
Sbjct: 1 MSSIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEID----IGPSRAHRDVERD----- 51
Query: 69 DAIHSVIGQRGSAPRIGLRDAVDSYMRRRMAG-NRDPNFDIRRGSGS------------- 114
P L +A ++MR R+A + D R GS
Sbjct: 52 -------------PTFDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIF 98
Query: 115 -GLVPEQTWGVFSSGSYLIVHDQGPGFSLPTGSSRGVPRRVEFGMGPGLEQLIEQLNV-N 172
G P + G +S V+ PG + G++ G ++ GPGLE+LIEQL+
Sbjct: 99 GGQAPFRLAGGDNSSVEAFVNGAAPGIGIARGTNAG-----DYFFGPGLEELIEQLSSGT 153
Query: 173 DRLGPAPASRSSIDAMPTIKIAQAHLRS-DSHCPVCQERFELGSKAREMPCNHIYHSDCI 231
GP PA +SSIDA+PTIKI Q HL+S DSHCPVC++ FEL S+A++MPC+HIYHSDCI
Sbjct: 154 HHRGPPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCI 213
Query: 232 VPWLVQHNSCPVCRIELPPEXXXXXXXXXXXXXXXXXXXXENSQLNHRRRNPLSFLWPFR 291
VPWLVQHNSCPVCR ELP N + N RRRN S LWPFR
Sbjct: 214 VPWLVQHNSCPVCRKELPSRGSSSSTQSSQNRST-------NGRENSRRRNIFSNLWPFR 266
>AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 158/302 (52%), Gaps = 43/302 (14%)
Query: 11 SSVATYWCYTCRQPILLAGRDVTCPYCDGSFVQELNERQGIAPQHGFSSLDPQAPDIFDA 70
SS T+WC+ C++ + L G++ C YC G FV+EL+ Q FD
Sbjct: 3 SSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEELDMAQASP---------------FDM 47
Query: 71 IHSVIGQRGSAPRIGLRDAVDSYMRRRMAGNRDPNFDIRRGSGS-------GLVPEQTWG 123
S G L DA +MR R+A R + +IR + S GL P +G
Sbjct: 48 FRSHRGVVERDQTFDLMDAFSVFMRNRLA-ERSHDREIRGRTISSGPENFPGLAPLLIFG 106
Query: 124 -------VFSSGSYLIVHDQGPGFSLPTGSSRGVPRRVEFGMGPGLEQLIEQLNV-NDRL 175
+ + + PG + G++ ++ GPGLE+L EQL+ R
Sbjct: 107 GQVPYRLTGDNAVEALFNGGSPGIGITRGNT------GDYFFGPGLEELFEQLSAGTTRR 160
Query: 176 GPAPASRSSIDAMPTIKIAQAHLRS-DSHCPVCQERFELGSKAREMPCNHIYHSDCIVPW 234
GP PA RS+IDA+PTIKIAQ HLRS DS+CPVC++ FELGS+A++MPCNHIYHSDCIVPW
Sbjct: 161 GPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPW 220
Query: 235 LVQHNSCPVCRIELP----PEXXXXXXXXXXXXXXXXXXXXENSQLN-HRRRNPLSFLWP 289
LVQHNSCPVCR ELP P NS+ N + RRNP S WP
Sbjct: 221 LVQHNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWP 280
Query: 290 FR 291
FR
Sbjct: 281 FR 282
>AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 158/302 (52%), Gaps = 43/302 (14%)
Query: 11 SSVATYWCYTCRQPILLAGRDVTCPYCDGSFVQELNERQGIAPQHGFSSLDPQAPDIFDA 70
SS T+WC+ C++ + L G++ C YC G FV+EL+ Q FD
Sbjct: 3 SSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEELDMAQASP---------------FDM 47
Query: 71 IHSVIGQRGSAPRIGLRDAVDSYMRRRMAGNRDPNFDIRRGSGS-------GLVPEQTWG 123
S G L DA +MR R+A R + +IR + S GL P +G
Sbjct: 48 FRSHRGVVERDQTFDLMDAFSVFMRNRLA-ERSHDREIRGRTISSGPENFPGLAPLLIFG 106
Query: 124 -------VFSSGSYLIVHDQGPGFSLPTGSSRGVPRRVEFGMGPGLEQLIEQLNV-NDRL 175
+ + + PG + G++ ++ GPGLE+L EQL+ R
Sbjct: 107 GQVPYRLTGDNAVEALFNGGSPGIGITRGNT------GDYFFGPGLEELFEQLSAGTTRR 160
Query: 176 GPAPASRSSIDAMPTIKIAQAHLRS-DSHCPVCQERFELGSKAREMPCNHIYHSDCIVPW 234
GP PA RS+IDA+PTIKIAQ HLRS DS+CPVC++ FELGS+A++MPCNHIYHSDCIVPW
Sbjct: 161 GPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPW 220
Query: 235 LVQHNSCPVCRIELP----PEXXXXXXXXXXXXXXXXXXXXENSQLN-HRRRNPLSFLWP 289
LVQHNSCPVCR ELP P NS+ N + RRNP S WP
Sbjct: 221 LVQHNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWP 280
Query: 290 FR 291
FR
Sbjct: 281 FR 282
>AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 158/302 (52%), Gaps = 43/302 (14%)
Query: 11 SSVATYWCYTCRQPILLAGRDVTCPYCDGSFVQELNERQGIAPQHGFSSLDPQAPDIFDA 70
SS T+WC+ C++ + L G++ C YC G FV+EL+ Q FD
Sbjct: 3 SSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEELDMAQASP---------------FDM 47
Query: 71 IHSVIGQRGSAPRIGLRDAVDSYMRRRMAGNRDPNFDIRRGSGS-------GLVPEQTWG 123
S G L DA +MR R+A R + +IR + S GL P +G
Sbjct: 48 FRSHRGVVERDQTFDLMDAFSVFMRNRLA-ERSHDREIRGRTISSGPENFPGLAPLLIFG 106
Query: 124 -------VFSSGSYLIVHDQGPGFSLPTGSSRGVPRRVEFGMGPGLEQLIEQLNV-NDRL 175
+ + + PG + G++ ++ GPGLE+L EQL+ R
Sbjct: 107 GQVPYRLTGDNAVEALFNGGSPGIGITRGNT------GDYFFGPGLEELFEQLSAGTTRR 160
Query: 176 GPAPASRSSIDAMPTIKIAQAHLRS-DSHCPVCQERFELGSKAREMPCNHIYHSDCIVPW 234
GP PA RS+IDA+PTIKIAQ HLRS DS+CPVC++ FELGS+A++MPCNHIYHSDCIVPW
Sbjct: 161 GPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPW 220
Query: 235 LVQHNSCPVCRIELP----PEXXXXXXXXXXXXXXXXXXXXENSQLN-HRRRNPLSFLWP 289
LVQHNSCPVCR ELP P NS+ N + RRNP S WP
Sbjct: 221 LVQHNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWP 280
Query: 290 FR 291
FR
Sbjct: 281 FR 282
>AT2G39720.1 | Symbols: RHC2A | RING-H2 finger C2A |
chr2:16567506-16568711 REVERSE LENGTH=401
Length = 401
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 125/250 (50%), Gaps = 17/250 (6%)
Query: 14 ATYWCYTCRQPILLAGRDVTCPYCDGSFVQELNERQGIAPQHGFSSLDP-QAPDIFDAIH 72
+YWCY+C + + ++ ++CP CDG F++ + E P F++ Q
Sbjct: 4 GSYWCYSCSRFVWVSD-SISCPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRSPTRFPP 62
Query: 73 SVIGQRGSAPRIGLRDAVDSYMRRRMAGNRDPN-FDIRRGSGSGLVPEQTWGVFSSGSYL 131
+ + ++ + R NR PN + RGS + + ++
Sbjct: 63 PSSSSSTPSASMHADNSPTPTIVTRTRSNRSPNPVIVLRGSAAAPSSDVVSEGLDRSAFQ 122
Query: 132 IVHDQGPGFSLPTGSSRGVPRRVEFGMGPGLEQLIEQ-----LNVNDRLGPA---PASRS 183
+ +D G +G P EF +G G ++L++Q LN N L PAS+S
Sbjct: 123 MYYDDGTD----SGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPASKS 178
Query: 184 SIDAMPTIKIAQAHLRSDS--HCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSC 241
+I+A+P I+I HL SDS HC VC+E F L S AREMPCNHIYH DCI+PWL NSC
Sbjct: 179 AIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSC 238
Query: 242 PVCRIELPPE 251
PVCR ELP E
Sbjct: 239 PVCRHELPAE 248
>AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:17178837-17180024 REVERSE
LENGTH=395
Length = 395
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 125/250 (50%), Gaps = 30/250 (12%)
Query: 15 TYWCYTCRQPILL-----AGRDVTCPYCDGSFVQELNERQGIAPQHGFSSLDPQAPDIFD 69
+YWCY+C + I + A V CPYC+G F++E+ + + +++ P++
Sbjct: 30 SYWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIED----SSNSTVAAIPASTPEV-R 84
Query: 70 AIHSVIGQRGSAPRIGLRDAVDSYMRRRMAGNRDPNFDIRRGSGSGLVPEQTWGVFSSGS 129
++ R R + + + G + G G E+ +
Sbjct: 85 SVEETHRSIIRRRRSNRRTSFNPVIVLHGGGGGGAGERVENEEGDGATRERR-------A 137
Query: 130 YLIVHDQGPGFSLPTGSSRGVPRRV-EFGMGPGLEQLIEQL-------NVNDRLGPAPAS 181
Y +D G G L R +P V E MG G E+L+EQL N R G PAS
Sbjct: 138 YEFYYDDGSGSGL-----RPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPAS 192
Query: 182 RSSIDAMPTIKIAQAHLRSDSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSC 241
+S+I+++P ++I+ H +++++C VC E FE G + REMPC HI+H DCIVPWL NSC
Sbjct: 193 KSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSC 252
Query: 242 PVCRIELPPE 251
PVCR ELP +
Sbjct: 253 PVCRFELPSD 262
>AT3G19950.1 | Symbols: | RING/U-box superfamily protein |
chr3:6942853-6943839 FORWARD LENGTH=328
Length = 328
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 124/251 (49%), Gaps = 27/251 (10%)
Query: 16 YWCYTCRQPILLA---GRDVTCPYCDGSFVQEL-----NERQGIAPQHGFSSLDPQAPDI 67
++CY C Q + ++ D CP C+ F++E N+ P S P A
Sbjct: 21 FFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSS-DSFFPMADPF 79
Query: 68 FDAIHSVIGQRGSAPR-IGLRDAVDSYMRRRM-AGNRDPNFDIRRGSGSGLVPEQTWGVF 125
+ + G +AP + M+ + + ++P D + +
Sbjct: 80 STLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAF--DPFTFLQNHLQTLR 137
Query: 126 SSGSYLIV----HDQGPGFSLPTGSSRGVPRRVEFGMGPGLEQLIEQLNVND--RLGPAP 179
SSG++ H PG +P ++ GPGLEQLI+QL ND R G P
Sbjct: 138 SSGTHFEFVIENHPSDPGNRMPGNFG-------DYFFGPGLEQLIQQLAENDPNRYGTPP 190
Query: 180 ASRSSIDAMPTIKIAQAHLRSD-SHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQH 238
AS+S+IDA+PT+K+ + L+S+ + C VC + FE GS ++MPC H++H DC++PWL H
Sbjct: 191 ASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELH 250
Query: 239 NSCPVCRIELP 249
NSCPVCR ELP
Sbjct: 251 NSCPVCRFELP 261
>AT1G60360.1 | Symbols: | RING/U-box superfamily protein |
chr1:22242748-22243731 REVERSE LENGTH=327
Length = 327
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 132/258 (51%), Gaps = 28/258 (10%)
Query: 12 SVATYWCYTCRQPILLAGR---DVTCPYCDGSFVQELNERQGIAPQHGFSSLDP---QAP 65
+ YWCY C + + +A ++ CP C FV E+ RQ P+ F+ P +P
Sbjct: 20 TFGLYWCYHCDRMVRIASSNPSEIACPRCLRQFVVEIETRQ--RPRFTFNHATPPFDASP 77
Query: 66 D--IFDAIH-----SVIGQRGSAP--RIGLRDAVDSYMRRRMAGNRDPNFDIRRGSGSGL 116
+ + +A+ + IG+ G+ P R R+ ++ R R R + D G L
Sbjct: 78 EARLLEALSLMFEPATIGRFGADPFLRARSRNILEPESRPRPQHRRRHSLDNVNNGGLPL 137
Query: 117 VPEQTWGVFSSGSYLIVHDQGPGFSLPTGSSRGVPRRVE----FGMGPGLEQLIEQLNVN 172
P +T+ + + P ++ ++ PR V F LEQLIEQL +
Sbjct: 138 -PRRTYVILRPN-----NPTSPLGNIIAPPNQAPPRHVNSHDYFTGASSLEQLIEQLTQD 191
Query: 173 DRLGPAPASRSSIDAMPTIKIAQAHLRSD-SHCPVCQERFELGSKAREMPCNHIYHSDCI 231
DR GP PAS +I+++P++KI HL +D S C VC E F +G A E+PC HIYH DCI
Sbjct: 192 DRPGPPPASEPTINSLPSVKITPQHLTNDMSQCTVCMEEFIVGGDATELPCKHIYHKDCI 251
Query: 232 VPWLVQHNSCPVCRIELP 249
VPWL +NSCP+CR +LP
Sbjct: 252 VPWLRLNNSCPICRRDLP 269
>AT3G10815.1 | Symbols: | RING/U-box superfamily protein |
chr3:3385009-3385608 REVERSE LENGTH=199
Length = 199
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 86/138 (62%), Gaps = 25/138 (18%)
Query: 162 LEQLIEQL-NVNDRLGPAPASRSSIDAMPTIKIAQAHLRSDSHCPVCQERFELGSKAREM 220
E+L +L + DR GP PAS ++I+++ IKI Q HL D +CPVCQ++FE+GS AR+M
Sbjct: 78 FEELFNRLPALQDRRGPPPASLAAINSLQKIKIRQKHLGLDPYCPVCQDQFEIGSDARKM 137
Query: 221 PCNHIYHSDCIVPWLVQHNSCPVCRIELPPEXXXXXXXXXXXXXXXXXXXXENSQLNHRR 280
PC HIYHS+CI+PWLVQ N+CPVCR ELP + N+ R
Sbjct: 138 PCKHIYHSECILPWLVQRNTCPVCRKELPQDR------------------------NNSR 173
Query: 281 RNPLSFLWPFRSSSSNAN 298
+NPL LWPFRSS +N
Sbjct: 174 KNPLWHLWPFRSSGLASN 191
>AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:23998422-23999645 REVERSE
LENGTH=407
Length = 407
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 126/270 (46%), Gaps = 71/270 (26%)
Query: 14 ATYWCYTCRQPILLAGR-------DVTCPYCDGSFVQELNERQGIAPQHGFSSLDPQAPD 66
A+YWCY+C + + + V CP+CDG F++++N+ A + P + +
Sbjct: 16 ASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSSSAATELTI----PASTE 71
Query: 67 I------------------FDAIHSVIGQRGSAPRIGLRDAVDSYMRRRMAGNRDPNFDI 108
+ + + VI +G A + D+ RR F
Sbjct: 72 VRSINNNRRSVIRRRRSGRRPSFNPVIVLQGGAGEREEGEEGDAARDRRAF-----EFYY 126
Query: 109 RRGSGSGLVPEQTWGVFSSGSYLIVHDQGPGFSLPTGSSRGVPRRVEFGMGPGLEQLIEQ 168
GSGSGL P LP S E MG G E+L+EQ
Sbjct: 127 DDGSGSGLRP-----------------------LPDSVS-------EILMGSGFERLLEQ 156
Query: 169 LNVND-------RLGPAPASRSSIDAMPTIKIAQAHLRSDSHCPVCQERFELGSKAREMP 221
L+ + R G PAS+S+I+++P ++I+ H+ S+++C VC E FE ++AREMP
Sbjct: 157 LSQIEASATGIGRSGNPPASKSAIESLPRVEISDCHIGSEANCAVCTEIFETETEAREMP 216
Query: 222 CNHIYHSDCIVPWLVQHNSCPVCRIELPPE 251
C H++H DCIVPWL NSCPVCR ELP E
Sbjct: 217 CKHLFHDDCIVPWLSIRNSCPVCRFELPSE 246
>AT1G55530.1 | Symbols: | RING/U-box superfamily protein |
chr1:20729472-20730527 REVERSE LENGTH=351
Length = 351
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 132/278 (47%), Gaps = 52/278 (18%)
Query: 13 VATYWCYTCRQ---PILLAGRDVTCPYCDGSFVQELNERQGIA---PQHGFSSLDPQAPD 66
V YWC+ C Q P++ A ++ CP+C FV+E+ + P ++ AP
Sbjct: 6 VTRYWCHMCSQTVNPVMEA--EIKCPFCQSGFVEEMEDDDDHDSSDPADVRANNSLWAPI 63
Query: 67 IFDAIHSVIGQRGSAPRIGLRDAVDSYMRRRMAGNRDPNFD------IRR---------- 110
+ + ++ + +R + + D + + + + D +RR
Sbjct: 64 LMELMNDPVRRRRNQSVESVEDNQNEVQTENNEDDGENDLDWQLQEILRRRRRHSAAVLQ 123
Query: 111 ---GSGSGL-VPEQTWG-----------VFSSGSYLIVHDQGPGFSLPTGSSRGVPRRVE 155
G +GL V ++ G + +S + V + S+P GS +
Sbjct: 124 LLQGIRAGLSVESESTGNGGNNPGRVILINTSNQTITVQNSADMDSVPAGSLG------D 177
Query: 156 FGMGPGLEQLIEQLNVND--RLGPAPASRSSIDAMPTIKIAQAHLRSDSHCPVCQERFEL 213
+ +GPG E L+++L ND R G PA + +++A+ T+KI + C VC + FE+
Sbjct: 178 YFIGPGFEMLLQRLAENDPNRYGTPPAKKEAVEALATVKIEETL-----QCSVCLDDFEI 232
Query: 214 GSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIELPPE 251
G++A+ MPC H +HSDC++PWL H+SCPVCR +LP +
Sbjct: 233 GTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPAD 270
>AT3G13430.3 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 132/277 (47%), Gaps = 48/277 (17%)
Query: 11 SSVATYWCYTCRQPI--LLAGRDVTCPYCDGSFVQEL--NERQGIAP------------- 53
+S +YWC+ C + + L+ + C +C FV+E+ N+ A
Sbjct: 4 ASETSYWCHMCSRSVIPLIQDEIIKCNFCQSGFVEEMDNNDDHQAADSLWTPILMEMMNN 63
Query: 54 ---QHGFSSLDPQAPDIFDAIHSVIGQRGSAPRIGLRDAVDSY--MRRRMAGNRDPNFDI 108
QH + D ++ + G G G D +RR + ++
Sbjct: 64 NHDQHSTNQEDSESILEDEDEDEDDGDDGDQNNDGEIDITHQLEEIRRIRTRHSTAIVNL 123
Query: 109 RRGSGSGLV---------PEQTWGVFSSGSY---LIVH-DQGPGFSLPTGSSRGVPRRVE 155
+G +GL+ P+ + V S+ + VH D S+P+GS +
Sbjct: 124 LQGIRAGLLIESENNEDNPDNSELVVLINSFNQRIRVHQDSVDTTSVPSGSLG------D 177
Query: 156 FGMGPGLEQLIEQL---NVNDRLGPAPASRSSIDAMPTIKIAQAHLRSDSHCPVCQERFE 212
+ +GPG E L+++L ++N+R G PA++ +++A+ +KI + L+ C VC + FE
Sbjct: 178 YFIGPGFETLLQRLAENDLNNRYGTPPATKEAVEALAMVKIEDSLLQ----CSVCLDDFE 233
Query: 213 LGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIELP 249
+G +A+EMPC H +HSDC++PWL H+SCPVCR LP
Sbjct: 234 IGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLP 270
>AT3G13430.2 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 132/277 (47%), Gaps = 48/277 (17%)
Query: 11 SSVATYWCYTCRQPI--LLAGRDVTCPYCDGSFVQEL--NERQGIAP------------- 53
+S +YWC+ C + + L+ + C +C FV+E+ N+ A
Sbjct: 4 ASETSYWCHMCSRSVIPLIQDEIIKCNFCQSGFVEEMDNNDDHQAADSLWTPILMEMMNN 63
Query: 54 ---QHGFSSLDPQAPDIFDAIHSVIGQRGSAPRIGLRDAVDSY--MRRRMAGNRDPNFDI 108
QH + D ++ + G G G D +RR + ++
Sbjct: 64 NHDQHSTNQEDSESILEDEDEDEDDGDDGDQNNDGEIDITHQLEEIRRIRTRHSTAIVNL 123
Query: 109 RRGSGSGLV---------PEQTWGVFSSGSY---LIVH-DQGPGFSLPTGSSRGVPRRVE 155
+G +GL+ P+ + V S+ + VH D S+P+GS +
Sbjct: 124 LQGIRAGLLIESENNEDNPDNSELVVLINSFNQRIRVHQDSVDTTSVPSGSLG------D 177
Query: 156 FGMGPGLEQLIEQL---NVNDRLGPAPASRSSIDAMPTIKIAQAHLRSDSHCPVCQERFE 212
+ +GPG E L+++L ++N+R G PA++ +++A+ +KI + L+ C VC + FE
Sbjct: 178 YFIGPGFETLLQRLAENDLNNRYGTPPATKEAVEALAMVKIEDSLLQ----CSVCLDDFE 233
Query: 213 LGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIELP 249
+G +A+EMPC H +HSDC++PWL H+SCPVCR LP
Sbjct: 234 IGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLP 270
>AT3G13430.1 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 132/277 (47%), Gaps = 48/277 (17%)
Query: 11 SSVATYWCYTCRQPI--LLAGRDVTCPYCDGSFVQEL--NERQGIAP------------- 53
+S +YWC+ C + + L+ + C +C FV+E+ N+ A
Sbjct: 4 ASETSYWCHMCSRSVIPLIQDEIIKCNFCQSGFVEEMDNNDDHQAADSLWTPILMEMMNN 63
Query: 54 ---QHGFSSLDPQAPDIFDAIHSVIGQRGSAPRIGLRDAVDSY--MRRRMAGNRDPNFDI 108
QH + D ++ + G G G D +RR + ++
Sbjct: 64 NHDQHSTNQEDSESILEDEDEDEDDGDDGDQNNDGEIDITHQLEEIRRIRTRHSTAIVNL 123
Query: 109 RRGSGSGLV---------PEQTWGVFSSGSY---LIVH-DQGPGFSLPTGSSRGVPRRVE 155
+G +GL+ P+ + V S+ + VH D S+P+GS +
Sbjct: 124 LQGIRAGLLIESENNEDNPDNSELVVLINSFNQRIRVHQDSVDTTSVPSGSLG------D 177
Query: 156 FGMGPGLEQLIEQL---NVNDRLGPAPASRSSIDAMPTIKIAQAHLRSDSHCPVCQERFE 212
+ +GPG E L+++L ++N+R G PA++ +++A+ +KI + L+ C VC + FE
Sbjct: 178 YFIGPGFETLLQRLAENDLNNRYGTPPATKEAVEALAMVKIEDSLLQ----CSVCLDDFE 233
Query: 213 LGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIELP 249
+G +A+EMPC H +HSDC++PWL H+SCPVCR LP
Sbjct: 234 IGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLP 270
>AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |
chr5:22818254-22819444 FORWARD LENGTH=396
Length = 396
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 10/124 (8%)
Query: 131 LIVHDQGPGFSLPTGSSRGVPRRVEFG---MGPGLEQLIEQLNVND--RLGPAPASRSSI 185
++++ +P+ ++ P G +GPGL+ L++ L ND R G PA + ++
Sbjct: 186 IMINPYNQSLVVPSDQNQNHPSLTSLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAV 245
Query: 186 DAMPTIKIAQAHLRSDSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCR 245
+A+PT+KI + C VC + FE G++A+EMPC H +H CIVPWL H+SCPVCR
Sbjct: 246 EALPTVKIMEP-----LQCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCR 300
Query: 246 IELP 249
ELP
Sbjct: 301 FELP 304
>AT4G26400.1 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 65/99 (65%), Gaps = 7/99 (7%)
Query: 155 EFGMGPGLEQLIEQLNVND--RLGPAPASRSSIDAMPTIKIAQAHLRSDSHCPVCQERFE 212
++ +G L+ L+E L ND R G PA + +D +PT+KI+++ C +C + F+
Sbjct: 195 DYFVGSSLDHLLEHLADNDSIRHGSLPARKEVVDNLPTVKISESL-----QCSICLDDFD 249
Query: 213 LGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIELPPE 251
GS+A+EMPC H +H CIVPWL H+SCPVCR ELPP+
Sbjct: 250 KGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPPD 288
>AT4G26400.2 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 65/99 (65%), Gaps = 7/99 (7%)
Query: 155 EFGMGPGLEQLIEQLNVND--RLGPAPASRSSIDAMPTIKIAQAHLRSDSHCPVCQERFE 212
++ +G L+ L+E L ND R G PA + +D +PT+KI+++ C +C + F+
Sbjct: 195 DYFVGSSLDHLLEHLADNDSIRHGSLPARKEVVDNLPTVKISESL-----QCSICLDDFD 249
Query: 213 LGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIELPPE 251
GS+A+EMPC H +H CIVPWL H+SCPVCR ELPP+
Sbjct: 250 KGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPPD 288
>AT5G01980.1 | Symbols: | RING/U-box superfamily protein |
chr5:375542-377023 FORWARD LENGTH=493
Length = 493
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Query: 161 GLEQLIEQL--NVNDRLGPAPASRSSIDAMPTIKIAQAHLRSDSHCPVCQERFELGSKAR 218
G ++L+EQL + N R G PAS S + +P + IA+ H+ C +C+E F L ++
Sbjct: 305 GFDELLEQLAESDNSRRGAPPASVSCVRNLPRVIIAEEHVMKGLVCAICKELFSLRNETT 364
Query: 219 EMPCNHIYHSDCIVPWLVQHNSCPVCRIELPPE 251
++PC H+YH+ CIVPWL NSCP+CR ELP +
Sbjct: 365 QLPCLHLYHAHCIVPWLSARNSCPLCRYELPTD 397
>AT3G60080.1 | Symbols: | RING/U-box superfamily protein |
chr3:22187635-22188555 FORWARD LENGTH=306
Length = 306
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 50/73 (68%), Gaps = 8/73 (10%)
Query: 185 IDAMPTIKIAQAHLRSDSH--------CPVCQERFELGSKAREMPCNHIYHSDCIVPWLV 236
ID++PTI+I+ + L S C VC+E F +G AR +PC+HIYHSDCIVPWL
Sbjct: 142 IDSIPTIQISSSLLCSTDDSDPDSVLLCAVCKEDFIIGESARRLPCSHIYHSDCIVPWLS 201
Query: 237 QHNSCPVCRIELP 249
HNSCP+CR ELP
Sbjct: 202 DHNSCPLCRFELP 214
>AT1G68180.1 | Symbols: | RING/U-box superfamily protein |
chr1:25554816-25555562 FORWARD LENGTH=248
Length = 248
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 53/75 (70%)
Query: 174 RLGPAPASRSSIDAMPTIKIAQAHLRSDSHCPVCQERFELGSKAREMPCNHIYHSDCIVP 233
++GP PAS+S+I+A+ T+ I L + C +C+E FE+G + +E+ C H+YHS CIV
Sbjct: 108 QIGPPPASQSAIEAVRTVIITDEDLVKEKVCAICKEEFEVGEEGKELKCLHLYHSSCIVS 167
Query: 234 WLVQHNSCPVCRIEL 248
WL HN+CP+CR E+
Sbjct: 168 WLNIHNTCPICRFEV 182
>AT2G44330.1 | Symbols: | RING/U-box superfamily protein |
chr2:18310621-18311163 FORWARD LENGTH=180
Length = 180
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 52/71 (73%), Gaps = 6/71 (8%)
Query: 185 IDAMPTIKIAQAHLRSDSH------CPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQH 238
++++PTIKI+ + L S S C +C+E F +G AR +PCNH+YH+DCI+PWL H
Sbjct: 71 MESLPTIKISSSMLSSASSDDSALPCAICREDFVVGESARRLPCNHLYHNDCIIPWLTSH 130
Query: 239 NSCPVCRIELP 249
NSCP+CR+ELP
Sbjct: 131 NSCPLCRVELP 141
>AT5G08139.1 | Symbols: | RING/U-box superfamily protein |
chr5:2616487-2617617 FORWARD LENGTH=376
Length = 376
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 175 LGPAPASRSSIDAMPTIKIAQAHLRSDSH--CPVCQERFELGSKAREMPCNHIYHSDCIV 232
+G P S+S ++ +P + + + D C VC++ +G+KA ++PCNH YHS+CIV
Sbjct: 279 IGLPPTSKSFLNNLPVV-LLEGENDDDGGLVCAVCKDEMNIGNKAVQLPCNHKYHSECIV 337
Query: 233 PWLVQHNSCPVCRIELPPE 251
PWL N+CPVCR ELP +
Sbjct: 338 PWLKVRNTCPVCRYELPTD 356
>AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein |
chr5:7092663-7094310 REVERSE LENGTH=310
Length = 310
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 143 PTGSSRGVPRRVEFGMGPGLEQLIEQLNVNDRLGPA---PASRSSIDAMPTIKIAQAHLR 199
PT ++ G + + GL+ +I ++ D GP PAS+ ++ +P I + L+
Sbjct: 165 PTENTIGETANLMQELINGLDMIIP--DILDDGGPPRAPPASKEVVEKLPVIIFTEELLK 222
Query: 200 ---SDSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIELPPE 251
+++ C +C+E +G K +E+PC H +H C+ PWL +HNSCP+CR ELP +
Sbjct: 223 KFGAEAECCICKENLVIGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTD 277
>AT3G02340.1 | Symbols: | RING/U-box superfamily protein |
chr3:477032-478261 FORWARD LENGTH=409
Length = 409
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 176 GPAPASRSSIDAMPTIKIAQAHL-RSDSHCPVCQERFELGSKAREMPCNHIYHSDCIVPW 234
G PA++S I +P +++A L + ++ C VC++ + K R +PC+H YH +CI+PW
Sbjct: 306 GNPPAAKSVIQDLPVVELAVEELDKGNNVCAVCKDEMLVEEKVRRLPCSHFYHGECIIPW 365
Query: 235 LVQHNSCPVCRIELPPE 251
L N+CPVCR ELP +
Sbjct: 366 LGIRNTCPVCRYELPTD 382
>AT5G15820.1 | Symbols: | RING/U-box superfamily protein |
chr5:5161787-5162833 FORWARD LENGTH=348
Length = 348
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 176 GPAPASRSSIDAMPTIKIAQAHLRSDS-HCPVCQERFELGSKAREMPCNHIYHSDCIVPW 234
G PAS+S +D +P +++ L S S C +C++ K + +PC H YH +CI+PW
Sbjct: 262 GTPPASKSVVDGLPDVELTIEELSSVSIVCAICKDEVVFKEKVKRLPCKHYYHGECIIPW 321
Query: 235 LVQHNSCPVCRIELPPE 251
L N+CPVCR ELP +
Sbjct: 322 LGIRNTCPVCRHELPTD 338
>AT1G26800.1 | Symbols: | RING/U-box superfamily protein |
chr1:9285576-9286190 REVERSE LENGTH=204
Length = 204
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Query: 157 GMGPGLEQLIEQLNVNDRLGPAPASRSSIDAMPTIKIAQAHLRSDSHCPVCQERFELGSK 216
GM P L L+E + G PAS++SIDAMP ++I + C +C E ++
Sbjct: 74 GMNPLLRSLLE----SREEGRPPASKASIDAMPIVEIDGC----EGECVICLEEWKSEET 125
Query: 217 AREMPCNHIYHSDCIVPWLVQHNSCPVCRIELP 249
+EMPC H +H CI WL H SCPVCR E+P
Sbjct: 126 VKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMP 158
>AT1G14200.1 | Symbols: | RING/U-box superfamily protein |
chr1:4854532-4855071 REVERSE LENGTH=179
Length = 179
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 151 PRRVEFGMGPGLEQLIEQLNVNDRLGPAPASRSSIDAMPTIKIAQAHLRSDSHCPVCQER 210
PR V G GL+ + G +PA +S ++ MP + I + + C +C +
Sbjct: 59 PRFVMIGSRSGLDDFFSD---GGKQGRSPALKSEVENMPRVVIGEDKEKYGGSCAICLDE 115
Query: 211 FELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIELP 249
+ G A EMPC H +HS C+ WL +H +CP+CR E+P
Sbjct: 116 WSKGDVAAEMPCKHKFHSKCVEEWLGRHATCPMCRYEMP 154
>AT5G64920.1 | Symbols: CIP8 | COP1-interacting protein 8 |
chr5:25944338-25945342 REVERSE LENGTH=334
Length = 334
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 46/70 (65%)
Query: 179 PASRSSIDAMPTIKIAQAHLRSDSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQH 238
PA++S+I+A+ T +++ + C VC++ +G +++PC H YH DCIVPWL
Sbjct: 232 PAAKSAIEALETFEVSSSEGEMVMVCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTR 291
Query: 239 NSCPVCRIEL 248
NSCPVCR +L
Sbjct: 292 NSCPVCRFQL 301
>AT5G60820.1 | Symbols: | RING/U-box superfamily protein |
chr5:24469636-24470895 FORWARD LENGTH=419
Length = 419
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
Query: 164 QLIEQLNVNDRLGPAPASRSSIDAMPTIKIAQAHLRSDSH----CPVCQERFELGSKARE 219
+++ + ++ +G PAS+S I + ++ + + C VC+E +G + E
Sbjct: 328 EMLFEAEISSGIGKPPASKSFIKNLKVSPLSNEDVMENDDDAVCCAVCKEEMIVGKEVAE 387
Query: 220 MPCNHIYHSDCIVPWLVQHNSCPVCRIELPPE 251
+PC H YHS+CIVPWL N+CPVCR ELP +
Sbjct: 388 LPCRHKYHSECIVPWLGIRNTCPVCRFELPSD 419
>AT1G18780.1 | Symbols: | RING/U-box superfamily protein |
chr1:6476258-6477235 REVERSE LENGTH=325
Length = 325
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 146 SSRGVPRRVEFGMGPGLEQLIE-QLNVNDRLGPAPASRSSIDAM--PTIKIAQAHLRSDS 202
+S G ++E +E++ + N + + PAS+ ++ A+ T K A + +
Sbjct: 216 ASFGFDHQIEEASHSQIEEVFQVSFNETNTVRLKPASKLTVGALNRKTYKKASGVVCEND 275
Query: 203 HCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIELPPE 251
C +C E F+ G +PC H + +C++ W V+ + CP+CR+ELP E
Sbjct: 276 VCTICLEEFDDGRSIVTLPCGHEFDEECVLEWFVRSHVCPLCRLELPCE 324
>AT5G02750.1 | Symbols: | RING/U-box superfamily protein |
chr5:620101-620952 FORWARD LENGTH=283
Length = 283
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 204 CPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIELPPE 251
C +C+E G EMPC H +H CI+PWL + N+CP CR +LP +
Sbjct: 214 CVICKEEMSEGRDVCEMPCQHFFHWKCILPWLSKKNTCPFCRFQLPTD 261
>AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 181 SRSSIDAMPTIKIAQAHL----RSDSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLV 236
S+ I+ +PT K + R+ C +CQ ++++G + +PC H+YHS+CI WL
Sbjct: 170 SQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLS 229
Query: 237 QHNSCPVCRIEL 248
+ CPVC E+
Sbjct: 230 INKVCPVCNSEV 241
>AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 181 SRSSIDAMPTIKIAQAHL----RSDSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLV 236
S+ I+ +PT K + R+ C +CQ ++++G + +PC H+YHS+CI WL
Sbjct: 170 SQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLS 229
Query: 237 QHNSCPVCRIEL 248
+ CPVC E+
Sbjct: 230 INKVCPVCNSEV 241
>AT4G10150.1 | Symbols: | RING/U-box superfamily protein |
chr4:6328136-6329558 FORWARD LENGTH=236
Length = 236
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 171 VNDRLGPAPA--SRSSIDAMPTIKIAQAHLRSDSHCPVCQERFELGSKAREMP-CNHIYH 227
N+ L A S+ + +P + ++ + DS C VC ++ K ++MP C H +H
Sbjct: 76 TNNNLSTAELGLSKDIREMLPVVIYKESFIVKDSQCSVCLGDYQAEEKLQQMPSCGHTFH 135
Query: 228 SDCIVPWLVQHNSCPVCRIELPPE 251
+CI WL H +CP+CR+ L P+
Sbjct: 136 MECIDLWLTSHTTCPLCRLSLIPK 159
>AT4G35840.1 | Symbols: | RING/U-box superfamily protein |
chr4:16981083-16982266 FORWARD LENGTH=236
Length = 236
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 158 MGPGLEQLIEQLNVNDRLGPAPASRSSIDAMPTIKIA-----QAHLRSDSHCPVCQERFE 212
MG E ++ D G + +D +P IKI A DS C VC + F+
Sbjct: 141 MGAVDSTFEELSSIFDTGGSKGLTGDLVDKIPKIKITGKNNLDASGNKDS-CSVCLQDFQ 199
Query: 213 LGSKAREMP-CNHIYHSDCIVPWLVQHNSCPVCRIEL 248
LG R +P C+H++H CI WL +H SCP+CR +L
Sbjct: 200 LGETVRSLPHCHHMFHLPCIDNWLFRHGSCPMCRRDL 236
>AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 |
chr3:22254790-22255794 REVERSE LENGTH=334
Length = 334
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 174 RLGPAPASRSSIDAMPTIKIAQAHLRSDS----HCPVCQERFELGSKAREMP-CNHIYHS 228
R+ P S +D++P K + RS S C VC +FE + R +P C H +H+
Sbjct: 83 RVSPETERSSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHA 142
Query: 229 DCIVPWLVQHNSCPVCR 245
DCI WLV + +CP+CR
Sbjct: 143 DCIDIWLVSNQTCPLCR 159
>AT5G52140.1 | Symbols: | RING/U-box superfamily protein |
chr5:21184566-21186872 REVERSE LENGTH=280
Length = 280
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 191 IKIAQAHLRSDSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIELPP 250
+ + + + DS C +C + G K +PC HIYH DCI WL Q+ C +C+ E+ P
Sbjct: 221 LHMKKKFVADDSQCSICLMEYAKGDKITTLPCKHIYHKDCISQWLKQNKVCCICKAEVYP 280
>AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:6471150-6471824 REVERSE LENGTH=224
Length = 224
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 179 PASRSSIDAMPTIKIAQAHLRSDSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQH 238
PA++ ++++ KI + S C +C E F G+K +PC H + +C++ W +
Sbjct: 151 PANKLVVNSLAR-KIYKKTTSSTERCTICLEEFNDGTKVMTLPCGHEFDDECVLTWFETN 209
Query: 239 NSCPVCRIELPPE 251
+ CP+CR +LP E
Sbjct: 210 HDCPLCRFKLPCE 222
>AT4G24015.1 | Symbols: | RING/U-box superfamily protein |
chr4:12469887-12471197 REVERSE LENGTH=174
Length = 174
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 201 DSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSCPVCR 245
DS C VC FEL + EMP C HI+H DCI WL HN+CP+CR
Sbjct: 102 DSLCCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPLCR 147
>AT2G29840.1 | Symbols: | RING/U-box superfamily protein |
chr2:12732387-12733983 REVERSE LENGTH=293
Length = 293
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 153 RVEFGMGPGLEQLIE-QLNVNDRLGPAPASRSSIDAM--PTIKIAQAHLRSDSHCPVCQE 209
+ E P EQ+++ N + PAS+ +++++ T K A + + C +C E
Sbjct: 190 QTEEAFHPQFEQVLQASFNETNTARLKPASKLAVESLNRKTYKKASDVVGENEMCSICLE 249
Query: 210 RFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIELPPE 251
F+ G +PC H + +C + W ++ CP+CR +LP E
Sbjct: 250 EFDDGRSIVALPCGHEFDDECALKWFETNHDCPLCRFKLPCE 291
>AT4G10160.1 | Symbols: | RING/U-box superfamily protein |
chr4:6336023-6337301 FORWARD LENGTH=225
Length = 225
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 172 NDRLGPAPA--SRSSIDAMPTIKIAQAHLRSDSHCPVCQERFELGSKAREMP-CNHIYHS 228
N+ L A S+ + +P + ++ +D+ C VC ++ K ++MP C H +H
Sbjct: 63 NNNLSTAELGLSKDIREMLPIVIYKESFTVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHM 122
Query: 229 DCIVPWLVQHNSCPVCRIELPPE 251
+CI WL H +CP+CR+ L P+
Sbjct: 123 ECIDLWLTSHTTCPLCRLSLIPK 145
>AT2G42360.1 | Symbols: | RING/U-box superfamily protein |
chr2:17640907-17641617 FORWARD LENGTH=236
Length = 236
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 185 IDAMPTIKIAQAH--LRSDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSC 241
I ++PT + S + C VC + KARE+P C HI+H DC+ WL ++C
Sbjct: 87 IASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTC 146
Query: 242 PVCRIELPP 250
PVCR E+ P
Sbjct: 147 PVCRTEVEP 155
>AT1G33480.1 | Symbols: | RING/U-box superfamily protein |
chr1:12148758-12150121 REVERSE LENGTH=261
Length = 261
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 186 DAMPTIKIAQAHLRSDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSCPVC 244
+ +P + ++ DS C VC ++ K +++P C H +H DCI WL H +CP+C
Sbjct: 82 EMLPIVVFKESFTVMDSQCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTSHTTCPLC 141
Query: 245 RIELPP 250
R+ L P
Sbjct: 142 RLALIP 147
>AT2G44578.1 | Symbols: | RING/U-box superfamily protein |
chr2:18400864-18401301 REVERSE LENGTH=145
Length = 145
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 192 KIAQAHLRSDSHCPVCQERFELGSKAREM-PCNHIYHSDCIVPWLVQHNSCPVCRIELPP 250
K A S +C +C E G K R + C+H +H DCI PWL++ ++CP+CR E+PP
Sbjct: 58 KTAAEEKHSSPYCTICLEDAAEGEKMRRITACSHCFHVDCIDPWLMKKSTCPLCRAEIPP 117
>AT1G04790.1 | Symbols: | RING/U-box superfamily protein |
chr1:1345469-1348143 FORWARD LENGTH=634
Length = 634
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 172 NDRLGPAPASRSSIDAMPTIKIAQAHLRSDSHCPVCQERFELGSKAREMPCNHIYHSDCI 231
N R G A A+R I+ +P + + + C +C E ++G R +PC H +H DCI
Sbjct: 561 NHRHGGASANR--INNLPESTVQTDNFQET--CVICLETPKIGDTIRHLPCLHKFHKDCI 616
Query: 232 VPWLVQHNSCPVCR 245
PWL + SCPVC+
Sbjct: 617 DPWLGRSKSCPVCK 630
>AT3G58720.1 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717892 REVERSE LENGTH=238
Length = 238
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 25/46 (54%)
Query: 201 DSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRI 246
D C VC E FE PC H++H +CIVPWL CPVCR
Sbjct: 141 DKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCRF 186
>AT3G58720.2 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717908 REVERSE LENGTH=266
Length = 266
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 25/46 (54%)
Query: 201 DSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRI 246
D C VC E FE PC H++H +CIVPWL CPVCR
Sbjct: 169 DKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCRF 214
>AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein |
chr5:1746938-1747999 FORWARD LENGTH=353
Length = 353
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 182 RSSIDAMPTIKIAQAHLRSDS-HCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHN 239
RS I+++P + D C VC RFE R +P C H +H +C+ WL H+
Sbjct: 69 RSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHS 128
Query: 240 SCPVCRIELPPE 251
+CP+CR + PE
Sbjct: 129 TCPLCRYRVDPE 140
>AT1G73760.1 | Symbols: | RING/U-box superfamily protein |
chr1:27739366-27741161 REVERSE LENGTH=367
Length = 367
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 200 SDSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCR 245
+D C +CQ+ +E + E+ C H +H DC+ WLV+ NSCPVC+
Sbjct: 315 ADRKCIICQDEYEAKDEVGELRCGHRFHIDCVNQWLVRKNSCPVCK 360
>AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705312 FORWARD LENGTH=241
Length = 241
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 158 MGPGLEQLIEQLNVNDRLGPAPASRSSIDAMPTIKIA-----QAHLRSDSHCPVCQERFE 212
MG + ++ D G + ++ +P + I A +DS C VC + F+
Sbjct: 146 MGAVDTAFDDHTSLFDTGGSKGLTGDLVEKIPKMTITGNNNTDASENTDS-CSVCLQDFQ 204
Query: 213 LGSKAREMP-CNHIYHSDCIVPWLVQHNSCPVCR 245
LG R +P C+H++H CI WL++H SCP+CR
Sbjct: 205 LGETVRSLPHCHHMFHLPCIDNWLLRHGSCPMCR 238
>AT1G18770.1 | Symbols: | RING/U-box superfamily protein |
chr1:6473370-6474048 REVERSE LENGTH=106
Length = 106
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 173 DRLGPAPASRSSIDAMPTIKIAQAHLRSDSHCPVCQERFELGSKAREMPCNHIYHSDCIV 232
D P PAS+ + ++ + C +C E F G + +PC H + +C++
Sbjct: 28 DGYNPTPASKLVVKSLARKIYKMTTSSTGEMCIICLEEFSEGRRVVTLPCGHDFDDECVL 87
Query: 233 PWLVQHNSCPVCRIELP 249
W ++SCP+CR +LP
Sbjct: 88 KWFETNHSCPLCRFKLP 104
>AT2G42350.1 | Symbols: | RING/U-box superfamily protein |
chr2:17639245-17639898 FORWARD LENGTH=217
Length = 217
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 185 IDAMPTIKIAQAHLRSDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSCPV 243
I ++PT + + + + C VC E AR +P C H++H C+ WL ++CPV
Sbjct: 81 IASLPTFVVGIKNDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPV 140
Query: 244 CRIELPP 250
CR E P
Sbjct: 141 CRTEAEP 147
>AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein |
chr2:8086860-8088131 REVERSE LENGTH=423
Length = 423
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 164 QLIEQLNVNDRLGPAPASRSSIDAMPTI--KIAQAHLRSDSHCPVCQERFELGSKAREMP 221
QL + N++D + +S ID +P K S CPVC FE K R +P
Sbjct: 88 QLQQLFNLHD----SGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLP 143
Query: 222 -CNHIYHSDCIVPWLVQHNSCPVCRIEL 248
C+H +H +CI WL+ H++CP+CR L
Sbjct: 144 KCSHAFHVECIDTWLLSHSTCPLCRSNL 171
>AT5G36001.1 | Symbols: | RING/U-box superfamily protein |
chr5:14142050-14143143 FORWARD LENGTH=322
Length = 322
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 199 RSDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSCPVCR 245
R+D+ CP+C + + +P C H +H++CI PWL HNSCPVCR
Sbjct: 259 RNDTLCPICLSEYTSEETVKCLPECEHCFHTECIDPWLKLHNSCPVCR 306
>AT5G66070.1 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=221
Length = 221
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 154 VEFGMGPGLEQLIEQLNVNDRLGPAPASRSSIDAMPTIKIAQAHLRSDSHCPVCQERFEL 213
V+ MG Q + ++ D + S++ +P ++I S C VC + F++
Sbjct: 127 VQSQMGAVESQFQDHTDIFDTAISKGLTGDSLNRIPKVRITDTSPEIVS-CSVCLQDFQV 185
Query: 214 GSKAREMP-CNHIYHSDCIVPWLVQHNSCPVCR 245
G R +P C+H++H CI WL +H SCP+CR
Sbjct: 186 GETVRSLPHCHHMFHLPCIDKWLRRHASCPLCR 218
>AT1G17970.1 | Symbols: | RING/U-box superfamily protein |
chr1:6185032-6187202 FORWARD LENGTH=368
Length = 368
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 163 EQLIEQLNVNDRLGPAPASRSSID---AMPTIKIAQAHLRSDSHCPVCQERFELGSKARE 219
EQL+E + DR+G + + IK + +H D C +CQ+ +E + E
Sbjct: 279 EQLLE---LGDRIGYVNTGLKESEIHRCLGKIKPSVSHTLVDRKCSICQDEYEREDEVGE 335
Query: 220 MPCNHIYHSDCIVPWLVQHNSCPVCR 245
+ C H +H C+ WL + N+CPVC+
Sbjct: 336 LNCGHSFHVHCVKQWLSRKNACPVCK 361
>AT1G74410.1 | Symbols: | RING/U-box superfamily protein |
chr1:27965723-27967681 FORWARD LENGTH=223
Length = 223
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 167 EQLNVNDRLGPAPASRSSIDAMPTIKIAQAHLRSD-SHCPVCQERFELGSKAREMP-CNH 224
E+ +V L S S+ +P ++ +R +HC +C + + G R +P C+H
Sbjct: 138 EREDVYGELEARGLSGDSLRKLPCYIMSSEMVRRQVTHCTICLQDIKTGEITRSLPKCDH 197
Query: 225 IYHSDCIVPWLVQHNSCPVCR 245
+H C+ WL++H SCP+CR
Sbjct: 198 TFHLVCVDKWLIRHGSCPICR 218
>AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein |
chr3:20595300-20597188 REVERSE LENGTH=273
Length = 273
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 204 CPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRI 246
C VC E+ +G R +PC H +H+ CI PWL Q +CPVC+
Sbjct: 211 CSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGTCPVCKF 253
>AT5G66070.2 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=245
Length = 245
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 158 MGPGLEQLIEQLNVNDRLGPAPASRSSIDAMPTIKIAQAHLRSDSHCPVCQERFELGSKA 217
MG Q + ++ D + S++ +P ++I S C VC + F++G
Sbjct: 155 MGAVESQFQDHTDIFDTAISKGLTGDSLNRIPKVRITDTSPEIVS-CSVCLQDFQVGETV 213
Query: 218 REMP-CNHIYHSDCIVPWLVQHNSCPVCR 245
R +P C+H++H CI WL +H SCP+CR
Sbjct: 214 RSLPHCHHMFHLPCIDKWLRRHASCPLCR 242
>AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:25515412-25516767 REVERSE
LENGTH=343
Length = 343
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 198 LRSDSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIEL 248
L D+ C +C +E G++ +PCNH +HS CIV WL + +CP+C+ +
Sbjct: 286 LPEDADCCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCKFNI 336
>AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogenesis
| chr2:324499-325895 FORWARD LENGTH=359
Length = 359
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 155 EFGMGPGLEQLIEQLNVNDRLGPAPASRSSIDAMPTIKIAQAHLRSDSHCPVCQERFELG 214
E G+ P + N + GP I+ + + + L D+ C +C +E G
Sbjct: 259 ELGVLPLYKFKAFHSNEKNITGPGKMVPIPINGL-CLATERTLLAEDADCCICLSSYEDG 317
Query: 215 SKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIEL 248
++ +PCNH +HS CIV WL +CP+C+ +
Sbjct: 318 AELHALPCNHHFHSTCIVKWLKMRATCPLCKYNI 351
>AT3G30460.1 | Symbols: | RING/U-box superfamily protein |
chr3:12104433-12104876 FORWARD LENGTH=147
Length = 147
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 204 CPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCR--IELP 249
C +C+E + E+PC H YH +CI WL N+CP+CR +ELP
Sbjct: 97 CAICREELAANERLSELPCRHYYHKECISNWLSNRNTCPLCRHNVELP 144
>AT3G13228.1 | Symbols: | RING/U-box superfamily protein |
chr3:4267075-4268052 FORWARD LENGTH=325
Length = 325
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 6/116 (5%)
Query: 141 SLPTGSSRGVPRRVEFGMGPGLEQLIEQ-----LNVNDRLGPAPASRSSIDAMPTIKIAQ 195
S G S G +V + P E IE+ + PAS+ + ++ T KI
Sbjct: 208 SASNGHSPGCALQVSLYLFPHDETDIEEAVQVSFDETTNFCLGPASKLVVKSL-TRKIYD 266
Query: 196 AHLRSDSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIELPPE 251
+ C +C E F G +PC H + +C V W ++ CP+CR ELP E
Sbjct: 267 KINYTGERCTICLEEFNAGGILVALPCGHDFDDECAVKWFETNHFCPLCRYELPRE 322
>AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein |
chr1:27226405-27227379 FORWARD LENGTH=324
Length = 324
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 173 DRLGPAPASRSSIDAMPTIKIAQAHLRSDSHCPVCQERFELGSKAREMP-CNHIYHSDCI 231
D L + + ++P + Q + C +C G KAR +P CNH +H +CI
Sbjct: 96 DALSNTGLTSFELSSLPIVFFRQDSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECI 155
Query: 232 VPWLVQHNSCPVCR 245
W H++CP+CR
Sbjct: 156 DMWFQSHSTCPICR 169
>AT5G01880.1 | Symbols: | RING/U-box superfamily protein |
chr5:339017-339496 FORWARD LENGTH=159
Length = 159
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 159 GPGLEQLIEQLNVNDRLGPAPASRSSIDAMPTIKIAQAHLR-SDSHCPVCQERFELGSKA 217
G GL V DR G + + P + ++ + + C +C F G +
Sbjct: 62 GFGLSSSAAAGTVADRAG---LKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERV 118
Query: 218 REMP-CNHIYHSDCIVPWLVQHNSCPVCRIEL 248
R +P CNH +H CI WLV H+SCP CR L
Sbjct: 119 RVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSL 150
>AT2G03000.1 | Symbols: | RING/U-box superfamily protein |
chr2:875233-877207 FORWARD LENGTH=535
Length = 535
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Query: 161 GLEQLIEQLNVNDRL--GPAPASRSSIDAMPTIKIAQAHLRSDSHCPVCQERFELGSKAR 218
L + RL +PA+ ++ +P + + + C +C E +
Sbjct: 441 SLRATVSSTRTTARLLTNESPATIRAVAMLPRVAMVE-----KGECVICFEEWSKSDMET 495
Query: 219 EMPCNHIYHSDCIVPWLVQHNSCPVCRIEL 248
E+PC H YH +C+ WL H SCP CR +L
Sbjct: 496 ELPCKHKYHLECVEKWLKIHTSCPQCRYKL 525
>AT2G44581.1 | Symbols: | RING/U-box superfamily protein |
chr2:18397996-18398433 REVERSE LENGTH=145
Length = 145
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 200 SDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSCPVCRIELPP 250
S +C +C E G K R + C+H +H DCI PWL + + CP+CR E+PP
Sbjct: 66 SSPYCTICLENATEGEKMRRIAACSHCFHVDCIDPWLEKKSMCPLCRAEIPP 117
>AT2G34990.1 | Symbols: | RING/U-box superfamily protein |
chr2:14750260-14751168 REVERSE LENGTH=302
Length = 302
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 185 IDAMPTIKIAQAHLR----SDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHN 239
I++ PT ++ R C VC FE R MP C H++H+DC+ WL H+
Sbjct: 73 INSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDHS 132
Query: 240 SCPVCRIEL 248
+CP+CR++L
Sbjct: 133 TCPLCRVDL 141
>AT1G80400.1 | Symbols: | RING/U-box superfamily protein |
chr1:30225864-30227360 FORWARD LENGTH=407
Length = 407
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 32/48 (66%)
Query: 201 DSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIEL 248
D+ C +C R+ + RE+PC+H++H DC+ WL + +CP+C+ E+
Sbjct: 352 DASCCICLTRYGDDEQVRELPCSHVFHVDCVDKWLKINATCPLCKNEV 399
>AT2G35000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14751809-14752945 REVERSE LENGTH=378
Length = 378
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 174 RLGPAPASRSSIDAMPTIKIAQAHL----RSDSHCPVCQERFELGSKAREMP-CNHIYHS 228
RL +I+ PT ++ + C VC FE R MP C H++H+
Sbjct: 101 RLTARGLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHA 160
Query: 229 DCIVPWLVQHNSCPVCRIEL 248
DC+ WL +H++CP+CR +L
Sbjct: 161 DCVDVWLSEHSTCPLCRADL 180
>AT5G57750.1 | Symbols: | RING/U-box superfamily protein |
chr5:23399668-23400300 FORWARD LENGTH=210
Length = 210
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 175 LGPAPASRSSIDAMPTIKI-AQAHLRSD-SHCPVCQERFELGSKAREMP-CNHIYHSDCI 231
L A +S IDA+P + LR D S C VC F + R +P C+H +H +CI
Sbjct: 91 LHDAEIDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAFHVECI 150
Query: 232 VPWLVQHNSCPVCR 245
WL+ +++CP+CR
Sbjct: 151 DTWLLTNSTCPLCR 164
>AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:8021854-8023516 REVERSE
LENGTH=422
Length = 422
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 182 RSSIDAMPTIKIAQAHLRSDS--HCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHN 239
R ++ AMP++ A + + + C +C E + +G K R +PC+H +H C+ WL+
Sbjct: 208 RRTVKAMPSVTFTCAKIDNTTGFSCAICLEDYIVGDKLRVLPCSHKFHVACVDSWLISWR 267
Query: 240 S-CPVCR 245
+ CPVC+
Sbjct: 268 TFCPVCK 274
>AT4G40070.1 | Symbols: | RING/U-box superfamily protein |
chr4:18576533-18577504 FORWARD LENGTH=323
Length = 323
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 201 DSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSCPVCRIELPPE 251
D C +C E R +P CNH++H DCI WL H +CPVCR L +
Sbjct: 121 DLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNLTAK 172
>AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348728-4350512 FORWARD LENGTH=408
Length = 408
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 193 IAQAHLRSDSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCR 245
I L+ D+ C +C +E G++ RE+PC H +H C+ WL + +CP+C+
Sbjct: 342 IEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCK 394
>AT3G15070.2 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 167 EQLNVNDRLGPAPASRSSIDAMPTIKIAQA-----------HLRSDSHCPVCQERFELGS 215
E L ++D++G SS D +K + L +DS C +CQE ++
Sbjct: 381 ELLALSDQIGTVKTGLSSEDVKELLKRRTSTRINLEEGPSTDLETDS-CTICQENYKNED 439
Query: 216 KAREMPCNHIYHSDCIVPWLVQHNSCPVCRIE 247
K + C H YH++C+ WLV N CP+C+ E
Sbjct: 440 KIATLDCMHKYHAECLKKWLVIKNVCPICKSE 471
>AT3G15070.1 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 167 EQLNVNDRLGPAPASRSSIDAMPTIKIAQA-----------HLRSDSHCPVCQERFELGS 215
E L ++D++G SS D +K + L +DS C +CQE ++
Sbjct: 381 ELLALSDQIGTVKTGLSSEDVKELLKRRTSTRINLEEGPSTDLETDS-CTICQENYKNED 439
Query: 216 KAREMPCNHIYHSDCIVPWLVQHNSCPVCRIE 247
K + C H YH++C+ WLV N CP+C+ E
Sbjct: 440 KIATLDCMHKYHAECLKKWLVIKNVCPICKSE 471
>AT1G21960.1 | Symbols: | RING/U-box superfamily protein |
chr1:7725972-7726586 FORWARD LENGTH=204
Length = 204
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 179 PASRSSIDAMPTIKIAQAHLRSDSH---CPVCQERFELGSKAREMPCNHIYHSDCIVPWL 235
PA++ +D + K+ +S+S C +C E FE G +PC H + CI W
Sbjct: 131 PANKLVVDRLAR-KVYNKKKKSNSDASVCTICLEEFEKGEIVVTLPCGHEFDDGCIGKWF 189
Query: 236 VQHNSCPVCRIELP 249
++ + CP+CR ELP
Sbjct: 190 LKDHVCPLCRFELP 203
>AT5G45290.1 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=545
Length = 545
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 175 LGPAPASRSSIDAMPTIKIAQAHLRSDSHCPVCQERFELGSKAREMPCNHIYHSDCIVPW 234
+G PA +D +P ++ S C +C +E R +PC+H +H C+ W
Sbjct: 461 IGSVPAPNDVVDLLPIKLYTKSQSEDPSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKW 520
Query: 235 LVQ-HNSCPVCR 245
L + H CP+CR
Sbjct: 521 LKEIHRVCPLCR 532
>AT2G15580.1 | Symbols: | RING/U-box superfamily protein |
chr2:6797687-6798815 FORWARD LENGTH=196
Length = 196
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 198 LRSDSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIEL 248
+R C +C +RF+ G +PC H +HS C++PWL + CP CR ++
Sbjct: 144 VREQQDCAICLDRFKKGETLVHLPCAHKFHSICLLPWLDTNVYCPYCRTDI 194
>AT4G30400.1 | Symbols: | RING/U-box superfamily protein |
chr4:14867068-14868486 FORWARD LENGTH=472
Length = 472
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 204 CPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSCPVCR 245
C VC FE K R +P C+H +H DCI WL+ H++CP+CR
Sbjct: 134 CAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCR 176
>AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348941-4350512 FORWARD LENGTH=337
Length = 337
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 193 IAQAHLRSDSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCR 245
I L+ D+ C +C +E G++ RE+PC H +H C+ WL + +CP+C+
Sbjct: 271 IEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCK 323
>AT2G18670.1 | Symbols: | RING/U-box superfamily protein |
chr2:8093469-8094452 FORWARD LENGTH=181
Length = 181
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 185 IDAMPTIKIAQ--AHLRSDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSC 241
+ +P K ++ + R +S C VC + F G R +P C H++H C+ WL++ ++C
Sbjct: 89 VKKLPQFKFSEPSTYTRYESDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLKASTC 148
Query: 242 PVCR 245
P+CR
Sbjct: 149 PICR 152
>AT5G54990.1 | Symbols: | RING/U-box superfamily protein |
chr5:22317505-22318185 FORWARD LENGTH=226
Length = 226
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 204 CPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIE 247
CP+C G ++PC+H++H DCI+ WL ++ SCP+CR +
Sbjct: 174 CPICLTELSSGVSRMKLPCSHVFHRDCIMTWLKKNPSCPICRTK 217
>AT5G10650.2 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 201 DSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIELPPE 251
D C +CQE + G + +PC H+YH C+ WL N CP+C+ E
Sbjct: 472 DIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICKTSAEEE 522
>AT5G10650.1 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 201 DSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIELPPE 251
D C +CQE + G + +PC H+YH C+ WL N CP+C+ E
Sbjct: 472 DIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICKTSAEEE 522
>AT4G12190.1 | Symbols: | RING/U-box superfamily protein |
chr4:7278545-7278760 REVERSE LENGTH=71
Length = 71
Score = 52.8 bits (125), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 204 CPVCQERFELGSKARE---MPCNHIYHSDCIVPWLVQHNSCPVCRIEL 248
C +C E G K R+ M C+H++H+ C++ WL + N+CP+CR EL
Sbjct: 22 CSICLESLVSGPKPRDITRMTCSHVFHNGCLLEWLKRKNTCPLCRTEL 69
>AT2G27940.1 | Symbols: | RING/U-box superfamily protein |
chr2:11897963-11898742 FORWARD LENGTH=237
Length = 237
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 184 SIDAMPTIKIAQAHLRSDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSCP 242
++ ++P + +A + + C +C FE G + +P C H++H DC+ WL + +CP
Sbjct: 120 AVRSLPVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCP 179
Query: 243 VCR 245
+CR
Sbjct: 180 LCR 182
>AT1G35330.1 | Symbols: | RING/U-box superfamily protein |
chr1:12965046-12966113 FORWARD LENGTH=327
Length = 327
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 204 CPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSCPVCRIELPPE 251
C +C FE R MP C+H +H+ CI WL ++CPVCR LPP+
Sbjct: 128 CAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASLPPK 176
>AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446878 FORWARD LENGTH=310
Length = 310
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 196 AHLRSDSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQH-NSCPVCRIELPPE 251
AH ++ C +C E + G R +PC H +H +CI WL + SCPVC+ ++ E
Sbjct: 224 AHHKAGETCAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCPVCKHDIRTE 280
>AT1G72220.1 | Symbols: | RING/U-box superfamily protein |
chr1:27184388-27185629 REVERSE LENGTH=413
Length = 413
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 202 SHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSCPVCR 245
+ CPVC FE R +P CNH +H CI WL H +CP+CR
Sbjct: 175 TDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCR 219
>AT1G22500.1 | Symbols: | RING/U-box superfamily protein |
chr1:7949581-7950726 FORWARD LENGTH=381
Length = 381
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Query: 157 GMGPGLEQLIEQLNVNDRLGPAPASRSSIDAMPTIKIAQAHL----RSDSHCPVCQERFE 212
G GPG LNV P S I+ PT + + CPVC FE
Sbjct: 73 GGGPG-----NWLNVRQTTEPG-LDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFE 126
Query: 213 LGSKAREMP-CNHIYHSDCIVPWLVQHNSCPVCRIELPP 250
R +P C H++H CI WL +CP+CR L P
Sbjct: 127 DDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANLVP 165
>AT5G66160.2 | Symbols: RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446722 FORWARD LENGTH=290
Length = 290
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 196 AHLRSDSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQH-NSCPVCRIELPPE 251
AH ++ C +C E + G R +PC H +H +CI WL + SCPVC+ ++ E
Sbjct: 224 AHHKAGETCAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCPVCKHDIRTE 280
>AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:27098250-27099881 FORWARD
LENGTH=448
Length = 448
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 181 SRSSIDAMPTIKIAQAHLRSDS--HCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQH 238
SR + AMP++ + H + + C +C E + +G K R +PC H +H+ C+ WL
Sbjct: 207 SRRLVKAMPSLIFSSFHEDNTTAFTCAICLEDYTVGDKLRLLPCCHKFHAACVDSWLTSW 266
Query: 239 NS-CPVCR 245
+ CPVC+
Sbjct: 267 RTFCPVCK 274
>AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr3:4777731-4778345 REVERSE LENGTH=204
Length = 204
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 169 LNVNDRLGPAPASRSSIDAMPTIKIAQAHLRSDSHCPVCQERFELGSKAREMP-CNHIYH 227
+ + +R+G P SI P + + C VC G KAR +P C+H +H
Sbjct: 56 ITIKERVGIKPYVLRSI---PIVDFNTKDFKYVLECVVCLSELADGDKARVLPSCDHWFH 112
Query: 228 SDCIVPWLVQHNSCPVCR 245
+CI WL +++CP+CR
Sbjct: 113 VECIDSWLQSNSTCPICR 130
>AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 |
chr3:5692880-5693794 FORWARD LENGTH=304
Length = 304
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 185 IDAMPTIKIAQAHLRSDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSCPV 243
I ++P + + C VC FE R +P C H +H DCI W H++CP+
Sbjct: 100 IKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPL 159
Query: 244 CR 245
CR
Sbjct: 160 CR 161
>AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B |
chr4:6906066-6906539 FORWARD LENGTH=157
Length = 157
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 9/125 (7%)
Query: 136 QGPGFSLPTGSSRGVPRRVEFGMGP--GLEQLIEQLNVN----DRLGPAPASRSSIDAMP 189
Q PG+ L T G R + + P GL ++ + RL + ++ + + +P
Sbjct: 11 QIPGYVLKTLYVIGFFRDMVDALCPYIGLPSFLDHNETSRSDPTRLALSTSATLANELIP 70
Query: 190 TIKIAQAHLRSDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHN--SCPVCRI 246
++ + + C VC F K R++P C H++H C+ W+V N +CP+CR
Sbjct: 71 VVRFSDLLTDPEDCCTVCLSDFVSDDKIRQLPKCGHVFHHRCLDRWIVDCNKITCPICRN 130
Query: 247 ELPPE 251
PE
Sbjct: 131 RFLPE 135
>AT1G72200.1 | Symbols: | RING/U-box superfamily protein |
chr1:27169935-27171149 REVERSE LENGTH=404
Length = 404
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 187 AMPTIKIAQAHLRSDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSCPVCR 245
+ T++I + L C VC FE R +P C H++H CI WL H +CP+CR
Sbjct: 131 TVKTLRIGKEAL----ECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCR 186
Query: 246 IELPP 250
+L P
Sbjct: 187 ADLIP 191
>AT4G15975.1 | Symbols: | RING/U-box superfamily protein |
chr4:9052313-9053020 FORWARD LENGTH=235
Length = 235
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 183 SSIDAMPTIKIAQAHLRSDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSC 241
S I ++P + C VC F+ R MP C H +H DCI W H+SC
Sbjct: 55 SIIKSLPIFTFSAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVDCIDMWFHSHSSC 114
Query: 242 PVCRIELPP 250
P+CR + P
Sbjct: 115 PLCRSLIEP 123
>AT5G42940.1 | Symbols: | RING/U-box superfamily protein |
chr5:17216649-17219171 REVERSE LENGTH=691
Length = 691
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 204 CPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRI 246
C VCQE + G + C H +HS CI WL Q N CP+C+
Sbjct: 637 CCVCQEEYTEGEDMGTLECGHEFHSQCIKEWLKQKNLCPICKT 679
>AT4G31450.1 | Symbols: | RING/U-box superfamily protein |
chr4:15255955-15257977 REVERSE LENGTH=497
Length = 497
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 199 RSDSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCR 245
+ D+ C +CQE + +G + + C H YH C+ WL + CP+C+
Sbjct: 443 KEDAKCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRIKSWCPICK 489
>AT1G53190.2 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 204 CPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIE 247
C +CQE F+ K + C H YH++C+ WL+ N CP+C+ E
Sbjct: 442 CTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICKSE 485
>AT1G53190.1 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 204 CPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIE 247
C +CQE F+ K + C H YH++C+ WL+ N CP+C+ E
Sbjct: 442 CTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICKSE 485
>AT3G20395.1 | Symbols: | RING/U-box superfamily protein |
chr3:7112020-7113792 REVERSE LENGTH=223
Length = 223
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 181 SRSSIDAMPTIKIAQAHLRSDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHN 239
S+SSI +P H ++ S C +C + +E G R++ C H +H +CI WL++
Sbjct: 149 SKSSIQNIPMFYNRSEH-QTKSSCSICLQDWEEGEVGRKLARCGHTFHMNCIDEWLLRQE 207
Query: 240 SCPVCR 245
+CP+CR
Sbjct: 208 TCPICR 213
>AT2G20030.1 | Symbols: | RING/U-box superfamily protein |
chr2:8647813-8648985 FORWARD LENGTH=390
Length = 390
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 182 RSSIDAMPTIKI-AQAHLRSDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHN 239
+ +I+++P + A L+ C VC +FE R +P C H +H CI WL QH
Sbjct: 101 KKAIESLPFFRFSALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHA 160
Query: 240 SCPVCR 245
+CP+CR
Sbjct: 161 TCPLCR 166
>AT3G61180.1 | Symbols: | RING/U-box superfamily protein |
chr3:22645680-22647290 FORWARD LENGTH=379
Length = 379
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 198 LRSDSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIEL 248
L D+ C +C +E G + RE+PC H +HS C+ WL + +CP+C+ +
Sbjct: 317 LSEDAECSICLCAYEDGVELRELPCRHHFHSLCVDKWLRINATCPLCKFNI 367
>AT5G42200.1 | Symbols: | RING/U-box superfamily protein |
chr5:16860523-16861014 FORWARD LENGTH=163
Length = 163
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 196 AHLRSDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSCPVCRIELPP 250
A + + C VC E E G R +P CNH +H C WL H CPVCR EL P
Sbjct: 96 AVIARSTECAVCLEDIESGQSTRLVPGCNHGFHQLCADTWLSNHTVCPVCRAELAP 151
>AT5G45290.2 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=546
Length = 546
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 175 LGPAPASRSSIDAMPTIKIAQAHLRSDSHCPVCQERFELGSKAREMPCNHIYHSDCIVPW 234
+G PA +D +P ++ S C +C +E R +PC+H +H C+ W
Sbjct: 461 IGSVPAPNDVVDLLPIKLYTKSQSEDPSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKW 520
Query: 235 LVQHNS--CPVCR 245
L + +S CP+CR
Sbjct: 521 LKEIHSRVCPLCR 533
>AT3G15740.1 | Symbols: | RING/U-box superfamily protein |
chr3:5333879-5334553 REVERSE LENGTH=224
Length = 224
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 167 EQLNVNDRLGPAPASRSSIDAMPTIKIAQAHLRSDSHCPVCQERFELGS--KAREMPCNH 224
+ ++V +L APA+ +++ + + + ++ +C +C + +GS +A MPC+H
Sbjct: 143 DHVDVQVQLAVAPANDEAVE----MHLETLVVENEGYCVICMDNIRVGSDVEAGRMPCSH 198
Query: 225 IYHSDCIVPWLVQHNSCPVCRIELP 249
++H C WL CPVCR P
Sbjct: 199 VFHRTCGEEWLRNSGICPVCRALFP 223
>AT5G24870.2 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 201 DSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRI 246
D C +CQE + G + +PC H YH C WL N CP+C+
Sbjct: 465 DVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICKT 510
>AT5G24870.1 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 201 DSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRI 246
D C +CQE + G + +PC H YH C WL N CP+C+
Sbjct: 465 DVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICKT 510
>AT4G32600.1 | Symbols: | RING/U-box superfamily protein |
chr4:15724010-15725737 FORWARD LENGTH=453
Length = 453
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 201 DSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIEL 248
D+ C +C ++ + RE+PC+H +H +C+ WL + SCP+C+ E+
Sbjct: 360 DAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSEV 407
>AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr4:7053737-7055516 REVERSE LENGTH=390
Length = 390
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 201 DSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIEL 248
D+ C +C +E G + RE+PCNH +H CI WL ++ CP+C+ +
Sbjct: 335 DAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNI 382
>AT4G05350.1 | Symbols: | RING/U-box superfamily protein |
chr4:2726910-2727530 REVERSE LENGTH=206
Length = 206
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 204 CPVCQERFELGSKARE---MPCNHIYHSDCIVPWLVQHNSCPVCRIEL 248
C +C E G K R+ M C+H++H+ C++ WL + N+CP+CR E+
Sbjct: 157 CSICLESLVSGPKPRDVTRMTCSHVFHNGCLLEWLKRKNTCPLCRTEI 204
>AT3G60966.1 | Symbols: | RING/U-box superfamily protein |
chr3:22552718-22553137 FORWARD LENGTH=139
Length = 139
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 203 HCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSCPVCRIELPP 250
C VC + E G K R + C H +H+DCI WL + + CP+CR ++PP
Sbjct: 61 FCAVCLQEAEEGEKMRRLTICRHCFHADCIDTWLSEMSKCPLCRAQIPP 109
>AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein |
chr3:1477377-1478573 FORWARD LENGTH=398
Length = 398
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 183 SSIDAMPTIKIAQAHL----RSDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQ 237
S ++ PT + + + C +C FE R +P C+H++H CI WL
Sbjct: 103 SVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEA 162
Query: 238 HNSCPVCRIEL 248
H +CPVCR L
Sbjct: 163 HVTCPVCRANL 173
>AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily
protein | chr5:3267819-3268724 FORWARD LENGTH=301
Length = 301
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 182 RSSIDAMPTIKIAQAH-LRSDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHN 239
RS+I+++ + + + + C VC FE R +P C+H +H +CI WL+ H
Sbjct: 112 RSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHK 171
Query: 240 SCPVCR 245
+CP+CR
Sbjct: 172 NCPLCR 177
>AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive 1
| chr5:9684119-9685225 FORWARD LENGTH=368
Length = 368
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 184 SIDAMPTIKIAQAHL----RSDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQH 238
+I+ PT ++ + C +C FE R +P C+H++H CI WL H
Sbjct: 100 TIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGH 159
Query: 239 NSCPVCRIEL 248
+CPVCR L
Sbjct: 160 VTCPVCRTNL 169
>AT1G49850.1 | Symbols: | RING/U-box superfamily protein |
chr1:18455326-18456444 REVERSE LENGTH=250
Length = 250
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 177 PAPASRSSIDAMPTIKIAQAHLRSDSH-CPVCQERFELGSKAREMPCNHIYHSDCIVPWL 235
P ++ +I+ + + A ++S+ C +C E F G +PC H +HS C+ PWL
Sbjct: 175 PQGLTQDAINCLHRQTFSSAEVKSEMRDCSICLESFTKGDMLISLPCTHSFHSSCLNPWL 234
Query: 236 VQHNSCPVCRIELPPE 251
CP CR + E
Sbjct: 235 RACGDCPCCRRAIAKE 250
>AT3G10910.1 | Symbols: | RING/U-box superfamily protein |
chr3:3413068-3413613 REVERSE LENGTH=181
Length = 181
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 202 SHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSCPVCRIELPPE 251
+ C +C FE G K R +P CNH +H CI WL+ +SCP CR L E
Sbjct: 112 TECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLLLE 162
>AT1G53820.1 | Symbols: | RING/U-box superfamily protein |
chr1:20091491-20092423 FORWARD LENGTH=310
Length = 310
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Query: 151 PRRVEFGMGPGLEQLIEQLNVNDRLGPAPASRSSIDAMPTIKIAQAHLRSDSHCPVCQER 210
P G P + + + D L A + ++ + + C VC
Sbjct: 67 PGSTVIGRNPRRRRFVFAQSQEDPLHNAGLDSKILQSIHVVVFKCTDFKDGLECAVCLSD 126
Query: 211 FELGSKAREMP-CNHIYHSDCIVPWLVQHNSCPVCR 245
G KAR +P CNH +H DCI W H++CP+CR
Sbjct: 127 LVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCR 162
>AT2G25410.1 | Symbols: | RING/U-box superfamily protein |
chr2:10814470-10815917 FORWARD LENGTH=377
Length = 377
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 183 SSIDAMPTIKIAQAHL----RSDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQ 237
S+I++ +++ ++ +D CP+C + R +P C H +H++CI WL
Sbjct: 302 STIESYKKVELGESRRLPTGSNDVVCPICLSEYATKETVRCLPECEHCFHTECIDAWLKL 361
Query: 238 HNSCPVCR 245
H+SCPVCR
Sbjct: 362 HSSCPVCR 369
>AT4G28890.1 | Symbols: | RING/U-box superfamily protein |
chr4:14256437-14257735 REVERSE LENGTH=432
Length = 432
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 182 RSSIDAMPTIKI-AQAHLRSDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHN 239
+++I+++P + A + C VC +FE R +P C H +H CI WL QH
Sbjct: 100 KTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHA 159
Query: 240 SCPVCRIELPPE 251
+CP+CR + E
Sbjct: 160 TCPLCRDRVSME 171
>AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A |
chr4:6907777-6908256 FORWARD LENGTH=159
Length = 159
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 131 LIVHDQGPGFSLPTGSSRGVPRRVEFGMGP--GLEQLIE--QLNVNDRLGPAPASRSSI- 185
I Q P + L G R + + P GL + ++ + + D A ++ +S+
Sbjct: 7 FITELQIPSYILKILYVIGFFRDIVDALCPYIGLPRFLDHNETSAPDLTRHALSTSASLA 66
Query: 186 -DAMPTIKIAQAHLRSDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHN--SC 241
+ +P ++ + + C VC FE K R++P C H++H C+ W+V +N C
Sbjct: 67 NELIPVVRFSDLPTDPEDCCTVCLSDFESDDKVRQLPKCGHVFHHYCLDRWIVDYNKMKC 126
Query: 242 PVCRIELPPE 251
PVCR P+
Sbjct: 127 PVCRHRFLPK 136
>AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A |
chr2:7576640-7577197 REVERSE LENGTH=185
Length = 185
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 182 RSSIDAMPTIKIAQAHLRSDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNS 240
RS+ A + A A + C +C F G + R +P C H +H +CI WLV +S
Sbjct: 80 RSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSS 139
Query: 241 CPVCRIELPP 250
CP CR L P
Sbjct: 140 CPSCRRILTP 149
>AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zinc
finger (C3HC4-type RING finger) family protein |
chr3:17725410-17727954 REVERSE LENGTH=349
Length = 349
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 182 RSSIDAMPTIKIAQAHLRSDS--HCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQH 238
+++IDA+P + + C VC F K R +P C+H +H CI WL+ +
Sbjct: 183 QTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSN 242
Query: 239 NSCPVCR 245
++CP+CR
Sbjct: 243 STCPLCR 249
>AT5G07225.1 | Symbols: | RING/U-box superfamily protein |
chr5:2268642-2270227 REVERSE LENGTH=234
Length = 234
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 185 IDAMPTIKIAQAHLRSDSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVC 244
I +PTIK + D C +C + G K +PC H YH DCI WL C VC
Sbjct: 171 ISQLPTIKFKPS--LEDKMCMICHSDYVRGDKLTILPCTHKYHKDCISHWLQNSKLCCVC 228
Query: 245 RIEL 248
+ E+
Sbjct: 229 QREV 232
>AT2G15530.3 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 204 CPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIE 247
C +CQE + G + C H +H DCI W++ N CP+C+ E
Sbjct: 656 CCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTE 699
>AT2G15530.2 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 204 CPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIE 247
C +CQE + G + C H +H DCI W++ N CP+C+ E
Sbjct: 656 CCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTE 699
>AT2G15530.1 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 204 CPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIE 247
C +CQE + G + C H +H DCI W++ N CP+C+ E
Sbjct: 656 CCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTE 699
>AT5G17600.1 | Symbols: | RING/U-box superfamily protein |
chr5:5800029-5801117 REVERSE LENGTH=362
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 202 SHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSCPVCR 245
S C VC FE R +P CNH +H CI WL H++CP+CR
Sbjct: 140 SDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCR 184
>AT1G23980.1 | Symbols: | RING/U-box superfamily protein |
chr1:8484879-8485988 REVERSE LENGTH=369
Length = 369
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 155 EFGMGPGLEQLIEQLNVNDRLGPAPASRSSIDAMPTIKIAQAH-LRSDSHCPVCQERFEL 213
EF ++ ++QL L + ++ IDA+P + + C VC F
Sbjct: 97 EFSDSDTYQRQLQQL---FHLHDSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSE 153
Query: 214 GSKAREMP-CNHIYHSDCIVPWLVQHNSCPVCR 245
K R +P C+H +H DCI WL+ +++CP+CR
Sbjct: 154 DDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCR 186
>AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 |
chr3:17713367-17716051 REVERSE LENGTH=358
Length = 358
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 204 CPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIELPPE 251
C +C E F +G + R +PC H +H +CI WL + CP CR + P+
Sbjct: 235 CLICLEEFHIGHEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVFPD 282
>AT3G16090.1 | Symbols: | RING/U-box superfamily protein |
chr3:5456513-5458694 FORWARD LENGTH=492
Length = 492
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 200 SDSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCR-IELPPE 251
SD+ C +C+E + A+++ C H++H C+ WL + +CP CR + +PPE
Sbjct: 288 SDATCIICREEM---TNAKKLICGHLFHVHCLRSWLERQQTCPTCRALVVPPE 337
>AT5G06490.1 | Symbols: | RING/U-box superfamily protein |
chr5:1977996-1978589 REVERSE LENGTH=197
Length = 197
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 195 QAHLRSDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSCPVCR 245
Q + S C +C ++ R +P CNH++H +C+ PWL H +CPVCR
Sbjct: 120 QKESSTTSCCSICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCR 171
>AT4G12140.1 | Symbols: | RING/U-box superfamily protein |
chr4:7266546-7267154 REVERSE LENGTH=202
Length = 202
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 185 IDAMPTIKIAQAHLRSDSHCPVCQERFELGSKA--REMPCNHIYHSDCIVPWLVQHNSCP 242
+ +M ++ ++ +DS C +C + SK M C+H++HS C+V WL + N+CP
Sbjct: 135 LGSMKAEELKSFNMETDS-CSICLQSLVSSSKTGPTRMSCSHVFHSSCLVEWLKRKNTCP 193
Query: 243 VCRIEL 248
+CR L
Sbjct: 194 MCRTVL 199
>AT3G14970.1 | Symbols: | RING/U-box superfamily protein |
chr3:5039071-5039733 REVERSE LENGTH=220
Length = 220
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 174 RLGPAPASRSSIDAMPTIKIAQAHLRSDSHCPVCQERFELG--SKAREMPCNHIYHSDCI 231
RL APAS +++ + + ++S C +C ++ +G A MPC+H++H C
Sbjct: 146 RLAVAPASNEAVEQ----HLETVVVENESWCVICMDKIRIGLDVAAGRMPCSHVFHRTCG 201
Query: 232 VPWLVQHNSCPVCRIELP 249
WL CPVCR P
Sbjct: 202 EDWLRCSGICPVCRAMFP 219
>AT4G12210.1 | Symbols: | RING/U-box superfamily protein |
chr4:7281308-7281919 REVERSE LENGTH=203
Length = 203
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 204 CPVCQERFELG---SKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIEL 248
C +C E G S M C+H++H+ C++ W ++ N+CP+CR EL
Sbjct: 153 CSICLENLVSGPKPSDLTRMTCSHVFHNPCLLEWFMRKNTCPLCRTEL 200
>AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr4:6041652-6043681 REVERSE
LENGTH=448
Length = 448
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 204 CPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNS-CPVCR 245
C +C E +E G K R +PC+H +H C+ WL Q S CPVC+
Sbjct: 234 CCICLENYEKGDKLRILPCHHKFHVACVDLWLGQRKSFCPVCK 276
>AT4G26580.2 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 170 NVNDRLGPAPASRSSIDAMPTIKIAQAHLRSDS-------HCPVCQERFELGSKAREMPC 222
N+N AS I ++P+ K SDS C +C +++ + R++PC
Sbjct: 248 NMNVGSSEKGASDDQISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKEEVRKLPC 307
Query: 223 NHIYHSDCIVPWLVQHNSCPVCRIELP 249
+H +H C+ WL + CP+C+ +LP
Sbjct: 308 SHRFHLKCVDQWLRIISCCPLCKQDLP 334
>AT4G26580.1 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 170 NVNDRLGPAPASRSSIDAMPTIKIAQAHLRSDS-------HCPVCQERFELGSKAREMPC 222
N+N AS I ++P+ K SDS C +C +++ + R++PC
Sbjct: 248 NMNVGSSEKGASDDQISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKEEVRKLPC 307
Query: 223 NHIYHSDCIVPWLVQHNSCPVCRIELP 249
+H +H C+ WL + CP+C+ +LP
Sbjct: 308 SHRFHLKCVDQWLRIISCCPLCKQDLP 334
>AT1G04360.1 | Symbols: | RING/U-box superfamily protein |
chr1:1167507-1168652 REVERSE LENGTH=381
Length = 381
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query: 183 SSIDAMPTIKIAQAHL--------RSDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVP 233
S+I A+P K + + ++ C VC F+ K R +P C H++H DCI
Sbjct: 105 SAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDI 164
Query: 234 WLVQHNSCPVCRIELPPE 251
WL + +CP+CR + E
Sbjct: 165 WLQGNANCPLCRTSVSCE 182
>AT5G55970.2 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 201 DSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIELP 249
D C +C +++ + R++PC+H +HS C+ WL + CP+C+ +LP
Sbjct: 294 DPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDLP 342
>AT5G55970.1 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 201 DSHCPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIELP 249
D C +C +++ + R++PC+H +HS C+ WL + CP+C+ +LP
Sbjct: 294 DPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDLP 342
>AT1G74620.1 | Symbols: | RING/U-box superfamily protein |
chr1:28028252-28029001 FORWARD LENGTH=249
Length = 249
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 204 CPVCQERFELGSK-AREMPCNHIYHSDCIVPWLVQHNSCPVCRIELPPE 251
C +C E + GS ++PC+H +H DCI WL ++ CP+CR +P +
Sbjct: 183 CAICMEDYIEGSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCRSSIPKD 231
>AT5G05280.1 | Symbols: | RING/U-box superfamily protein |
chr5:1565509-1566039 REVERSE LENGTH=176
Length = 176
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 202 SHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSCPVCRIEL 248
+ C +C F G R +P CNH +H CI WL+ H+SCP CR L
Sbjct: 111 TECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSL 158
>AT3G03550.1 | Symbols: | RING/U-box superfamily protein |
chr3:850391-851461 REVERSE LENGTH=356
Length = 356
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 202 SHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSCPVCR 245
S C VC F+ R +P CNH +H CI WL H++CP+CR
Sbjct: 157 SDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCR 201
>AT1G53010.1 | Symbols: | RING/U-box superfamily protein |
chr1:19747847-19748383 FORWARD LENGTH=178
Length = 178
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Query: 188 MPTIKIAQAHLRSDSH-------CPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHN 239
+P + + Q + D C +C + + + R P C HIYH+ CI WL H
Sbjct: 107 LPKLLVGQGNHEEDEEKSLESRECAICLSGYVVNEECRVFPVCRHIYHALCIDAWLKNHL 166
Query: 240 SCPVCRIELP 249
+CP CR +LP
Sbjct: 167 TCPTCRKDLP 176
>AT5G53910.1 | Symbols: | RING/U-box superfamily protein |
chr5:21890643-21891335 FORWARD LENGTH=230
Length = 230
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 204 CPVCQERFELGSKAREMPCNHIYHSDCIVPWLVQHNSCPVCRIELPPE 251
C +C + F+ G + + C H + + CI+ W +CP+CR ELP E
Sbjct: 172 CAICFQEFKTGREVATLLCGHEFDNKCIMEWFKVRYNCPLCRFELPRE 219
>AT3G18930.2 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 204 CPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSCPVCRIEL 248
C VC FE G R +P C H +H +CI WL H +CP+CR +
Sbjct: 156 CAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAI 201
>AT3G18930.1 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 204 CPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSCPVCRIEL 248
C VC FE G R +P C H +H +CI WL H +CP+CR +
Sbjct: 156 CAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAI 201
>AT5G53110.1 | Symbols: | RING/U-box superfamily protein |
chr5:21529022-21533008 FORWARD LENGTH=382
Length = 382
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 184 SIDAMPTIKIAQAH---LRSDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHN 239
+I++ P I + ++ D+ C +C +E R +P C H +H+DCI WL +
Sbjct: 307 TIESYPKIVLGESKRLPKVDDATCAICLSEYEPKETLRTIPQCQHCFHADCIDEWLKLNG 366
Query: 240 SCPVCR 245
+CPVCR
Sbjct: 367 TCPVCR 372
>AT1G28040.1 | Symbols: | RING/U-box superfamily protein |
chr1:9773580-9774910 REVERSE LENGTH=299
Length = 299
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 204 CPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSCPVCR 245
CP+C + R MP C+H +H CI WL H+SCPVCR
Sbjct: 253 CPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCPVCR 295
>AT2G46495.1 | Symbols: | RING/U-box superfamily protein |
chr2:19084134-19085704 REVERSE LENGTH=372
Length = 372
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 201 DSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLVQHNSCPVCR 245
D CP+C + R +P C+H +HS+CI WL H SCP+CR
Sbjct: 317 DIVCPICLSEYASKETVRCIPECDHCFHSECIDVWLKIHGSCPLCR 362
>AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVERSE
LENGTH=257
Length = 257
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 179 PASRSSIDAMPT-IKIAQAHLRSDSHCPVCQERFELGSKAREMP-CNHIYHSDCIVPWLV 236
P + ++ +P + + H C VC FE + R +P C H++H DCI W
Sbjct: 87 PLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFR 146
Query: 237 QHNSCPVCRIELPP 250
+SCP+CR + P
Sbjct: 147 SRSSCPLCRAPVQP 160