Miyakogusa Predicted Gene

Lj6g3v1008180.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1008180.1 Non Chatacterized Hit- tr|I3T103|I3T103_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.96,0,4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL
KINASE,4-diphosphocytidyl-2C-methyl-D-erythritol kinase; ,CUFF.58757.1
         (392 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G26930.1 | Symbols: ATCDPMEK, PDE277, ISPE, CDPMEK | 4-(cytid...   483   e-136

>AT2G26930.1 | Symbols: ATCDPMEK, PDE277, ISPE, CDPMEK | 4-(cytidine
           5'-phospho)-2-C-methyl-D-erithritol kinase |
           chr2:11491829-11494229 REVERSE LENGTH=383
          Length = 383

 Score =  483 bits (1242), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 235/337 (69%), Positives = 276/337 (81%), Gaps = 1/337 (0%)

Query: 42  PHLVKAMVSDS-NTSRKQLEVVYDHDERINKLADEVDKNAPLSRLTLFSPCKINVFLRMT 100
           P L++ ++S S   SRKQ+E+V+D DER+NK+ D+VDK APLSRL LFSPCKINVFLR+T
Sbjct: 29  PKLLRPLLSFSVKASRKQVEIVFDPDERLNKIGDDVDKEAPLSRLKLFSPCKINVFLRIT 88

Query: 101 NKREDGYHDLASLFHVISLGDTIKFSLSPSKTTDRLSTNVSGVPLDDRNLIIRALNLYRK 160
            KREDG+HDLASLFHVISLGDTIKFSLSPSK+ DRLSTNV GVP+D RNLII+ALNLYRK
Sbjct: 89  GKREDGFHDLASLFHVISLGDTIKFSLSPSKSKDRLSTNVQGVPVDGRNLIIKALNLYRK 148

Query: 161 KTGSDNFFWIHLDKKVPXXXXXXXXXXXXXXXXWAANQFSGCPSTEKELQEWSGEIGSDV 220
           KTGS+ FFWIHLDKKVP                WAAN+ +G   TE ELQ+WS EIGSD+
Sbjct: 149 KTGSNRFFWIHLDKKVPTGAGLGGGSSNAATALWAANELNGGLVTENELQDWSSEIGSDI 208

Query: 221 PFFFSQGAAYCTGRGEIVEDIPPPVSLDIPMVLIKPPQACSTAEVYKRLRLDQTSNVDPS 280
           PFFFS GAAYCTGRGEIV+D+PPP  LD+PMVLIKP +ACSTAEVYKRLRLDQTSN++P 
Sbjct: 209 PFFFSHGAAYCTGRGEIVQDLPPPFPLDLPMVLIKPREACSTAEVYKRLRLDQTSNINPL 268

Query: 281 TLLEKISRNGISQDVCINDLEPPAFEVLPSLKRLKQRITAAGRGKYDAVFMXXXXXXXXX 340
           TLLE ++ NG+SQ +C+NDLEPPAF VLPSLKRLKQRI A+GRG+YDAVFM         
Sbjct: 269 TLLENVTSNGVSQSICVNDLEPPAFSVLPSLKRLKQRIIASGRGEYDAVFMSGSGSTIIG 328

Query: 341 XXXPDPPQFVYDDDEYQDVFLSDAYFLTREPNQWYRE 377
              PDPPQF+YDD+EY++VFLS+A F+TRE N+WY+E
Sbjct: 329 IGSPDPPQFIYDDEEYKNVFLSEANFMTREANEWYKE 365