Miyakogusa Predicted Gene

Lj6g3v1008170.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1008170.1 Non Chatacterized Hit- tr|I1NE01|I1NE01_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40025
PE,81.16,0,UBA-like,UBA-like; UBA,Ubiquitin-associated/translation
elongation factor EF1B, N-terminal, eukaryot,CUFF.58756.1
         (648 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G26920.1 | Symbols:  | Ubiquitin-associated/translation elong...   437   e-123
AT5G12120.1 | Symbols:  | Ubiquitin-associated/translation elong...   390   e-108

>AT2G26920.1 | Symbols:  | Ubiquitin-associated/translation
           elongation factor EF1B protein | chr2:11489648-11491588
           FORWARD LENGTH=646
          Length = 646

 Score =  437 bits (1125), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 300/667 (44%), Positives = 395/667 (59%), Gaps = 45/667 (6%)

Query: 1   MSPASKSKSKDKRVGKEAQKSPAKPTGSANAVAGVPASAYNPLLGTFHTLEISPTSSTSP 60
           MSPA+KSKSKDK+ GKEAQK+  KP+ S N  + + AS YNPLLGTF  L+    +S SP
Sbjct: 6   MSPATKSKSKDKKTGKEAQKASPKPSLSVNGNSSLAASGYNPLLGTFQALDSVSIASISP 65

Query: 61  VHSNGRFQNIDETDEHPIGSAVAGVEYDSVSNNDSWSGESEDHKEKASNLAVRLEAVPGA 120
           +  + RF++IDE D       V G+E DSVSNN S SGESEDHKEK +NL ++ E +PGA
Sbjct: 66  LQYS-RFRSIDEAD-------VNGIESDSVSNNGSCSGESEDHKEKTTNLPLKQEVIPGA 117

Query: 121 DNDKREKIRQKNEKKHQRQKERRAQELHDRCNGYLMSRKLEALAQQLVAMGFSHERATVA 180
           DNDKREK+RQKNE+KHQRQKERRAQEL+++C+ YL+SRKLEA  QQ+VAMG S E AT A
Sbjct: 118 DNDKREKVRQKNERKHQRQKERRAQELNEKCSTYLISRKLEARTQQIVAMGISQEHATTA 177

Query: 181 LMLNEGRVEESVAWLFEGGEEADNQMDRNRGGGNLRIDISEELARIADLETRYSCSKQEV 240
           LM+N+G+VEESV WLF+  EE + +    +  GNL+IDI+EELARI  +E +  C++QE+
Sbjct: 178 LMMNDGKVEESVHWLFDRLEE-EIEKQSIQSPGNLKIDITEELARITKMELQLKCTRQEI 236

Query: 241 ERAVVACEGDLDKAAESLRELKMDRLSGQPKPEENGD--SPS--YKLSGVVSQSPRVQAK 296
           ERAVV  EGDLD+A E L+  K +  S   K EE GD  +PS    + G+  Q+  V+  
Sbjct: 237 ERAVVQAEGDLDRAEEVLKGTKYEEFSVPVKQEECGDPLTPSNGKLIVGIGYQNSDVERS 296

Query: 297 PFLSPN-QPKKDDKDFNYTKSAVMITGSTESSNRHLQPLLKRIQPKSEWAKPQQAAVTAD 355
              SP   P +DDK+FNYTKS      +TES N+ L   +KR + K +W KPQQ+A  AD
Sbjct: 297 EIPSPGLHPTRDDKNFNYTKSP----STTESVNKMLAQPMKRPELKLDWPKPQQSAALAD 352

Query: 356 RRWPGAGSN--PSVSYSLASPLQVSPTPAKTEASYMAGGADYNHIQPV----STREPVIV 409
           +RWP        +     +SP        + EA Y+A G ++ + Q      + RE V+V
Sbjct: 353 KRWPPTTGQVPSASYSLPSSPSPSPQPAVRVEARYLASGNEFKNFQQQQQQPANRESVMV 412

Query: 410 M-QRPQTVNAKKVPTAGLSSSPSDAAGSWYPTNNGEVMRPNGFMPPHN-PSTRSLNSNYG 467
           M QRPQ V    VPT+ +S+ P+    SW+P  + E+M+ NGFM  HN PS RS + N+ 
Sbjct: 413 MRQRPQVVITNPVPTSSMSAPPT----SWHPAASIEIMKSNGFMQTHNIPSARSPSPNHL 468

Query: 468 SSNXXXXXXXXXXXXXFVAGSGNAVD----LQATNQNMWNR-TGASPTLAAASSLGLFXX 522
           + N             F   + N VD    +   N   W R T +SP ++AASSLGLF  
Sbjct: 469 NPNQVYQQLQYQNQKRFT--NNNQVDPHGSMARGNGGQWTRNTASSPPISAASSLGLFSA 526

Query: 523 XXXXXXXXXXXXVDWSTGGSIKFDYTNIDWSLDRG-SSPPRSNALWRGLSPFIKSNAQIN 581
                       +DW +GGS+  DYTNIDWSLD+  S   R N  W GL    KS++QI 
Sbjct: 527 VGSAGTSGASSPIDWISGGSV--DYTNIDWSLDQSLSQNSRVNGNWSGL----KSSSQIY 580

Query: 582 GSNASGMAAQPSIRSLPSNGSMGPLHGLQDXXXXXXXXXXXXXXXXXPFEGKDIFTLPRQ 641
             N +  +   S+    +N +   +                      PFEGKDIF+L RQ
Sbjct: 581 DENMNRYSLNGSMGGRLNNSNGVSMENSGAGVIVETQQAATSPDWTSPFEGKDIFSLSRQ 640

Query: 642 FVSSPSL 648
           +V SPSL
Sbjct: 641 YV-SPSL 646


>AT5G12120.1 | Symbols:  | Ubiquitin-associated/translation
           elongation factor EF1B protein | chr5:3916229-3918088
           REVERSE LENGTH=619
          Length = 619

 Score =  390 bits (1002), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 266/674 (39%), Positives = 378/674 (56%), Gaps = 81/674 (12%)

Query: 1   MSPASKSKSKDKRVGKEAQKSPAKPTGSANAVAGVPASAYNPLLGTFHTLEISPTSSTSP 60
           MS ASK KS+DK+V  ++QK+P+K +GS    + V    YNPLLGTF T+E    + +S 
Sbjct: 1   MSSASKMKSRDKKVMNDSQKTPSKASGSMGG-SSVVVGGYNPLLGTFQTIESLSATGSSS 59

Query: 61  VHSNGRFQNIDETDEHPIGSAVAGVEYDSVSNNDSWSGESEDHKEK--ASNLAVRLEAVP 118
           +H+NGRF++IDE+D         G + DSVSNN SWSGESEDHKEK  ++++A + E +P
Sbjct: 60  LHNNGRFRHIDESDS-------TGADCDSVSNNGSWSGESEDHKEKVPSTSIAAKQEIIP 112

Query: 119 GADNDKREKIRQKNEKKHQRQKERRAQELHDRCNGYLMSRKLEALAQQLVAMGFSHERAT 178
           GADNDKR+K+R KNE+KHQRQKE+RAQELH+RC  YLMSRKLE  AQ +++MG  HERAT
Sbjct: 113 GADNDKRDKMRLKNERKHQRQKEKRAQELHERCCQYLMSRKLEVHAQLIISMGIPHERAT 172

Query: 179 VALMLNEGRVEESVAWLFE--GGEEADNQMDRNRGGGNLRIDISEELARIADLETRYSCS 236
            ALMLNEG++EES+ WLF+  G + AD ++D     GNL++DIS+EL RI +LET+Y C+
Sbjct: 173 YALMLNEGKIEESINWLFDDGGAKVADKKLDPT--SGNLKLDISQELGRILELETKYKCT 230

Query: 237 KQEVERAVVACEGDLDKAAESLRELKMDRLSGQPKPEENGDSPSYKLSGV----VSQSPR 292
           KQ+VERAVV  EGD++KA E+LR  K D+ +   KPE+  DS S   S V     SQ+  
Sbjct: 231 KQDVERAVVTAEGDIEKAEEALRRQKQDQSTASRKPEDISDSTSVNNSKVPSVLTSQNTV 290

Query: 293 VQAKP----FLSPNQPKKDDKDFNYTKSAVMITGSTESSNRHLQPLLKRIQPKSEWAKPQ 348
            Q +P    + +  +   D K+  Y + +  I+G  ES N+ +   L+RI  K +W K Q
Sbjct: 291 GQLQPNSGMYPAGREEALDRKNLGYPRGSSYISG--ESENQSVNS-LERIHMKLQWMKLQ 347

Query: 349 QAA-VTADRRWPGAGSNPSVSYSLASPLQVSPTPAKTEASYM--AGGADYNHIQPVSTRE 405
           Q A +  ++R                P Q +P    TE ++   A G  +  +Q    RE
Sbjct: 348 QNAPLEENKRI---------------PYQQTPLSRSTEETHYVTALGDQFKRLQQQDMRE 392

Query: 406 PVIVM-------QRPQTVNAKKVPTAGLSSSPSDAAGS---WYPTNNGEVMRPNGFMPPH 455
           PV+VM       QR Q+ N   +P + +++S + AA +   W+P N  E  + NG++P  
Sbjct: 393 PVMVMQQQQQQQQRSQSANTNVLPVSTMNASFTGAAAAGSGWHPANRSEAAQSNGYLP-- 450

Query: 456 NPSTRSLNSNYGSSNXXXXXXXXXXXXXFVAGSGNAVDLQATNQNMWNRTGASPTLAAAS 515
              +RSL  N  +SN              V  +G+ +            + A P +A A+
Sbjct: 451 ---SRSLPPNDLNSNLMYQQLQYQQYQGQVNNNGHRMA----------GSSAPPAVAPAA 497

Query: 516 SLGLFXXXXXXXXXXXXXXVDWSTGGSI-KFDYTNIDWSLDRGSSPPRSNALWRGLSPFI 574
           SLGLF              +DW+T GS+   DY NIDWSLD+G +  R +  +   S   
Sbjct: 498 SLGLF-SGFGSLAGSSSSGLDWNTDGSLGHLDYNNIDWSLDKGLACVRPSQQYVAASSPY 556

Query: 575 KSNAQINGSNASGMAAQPSIRSLPSNGSMGPLHGLQDXXXXXXXXXXXXXXXXXPFEGKD 634
            + +    ++ +G       R + +   MG   G+Q+                 PFEGKD
Sbjct: 557 SAASSPYEAHMNG-----RTRMMTNGNGMGVAMGVQE-----AALVGNGREWTSPFEGKD 606

Query: 635 IFTLPRQFVSSPSL 648
           +F+L RQ+V  PSL
Sbjct: 607 LFSLSRQYV-PPSL 619