Miyakogusa Predicted Gene

Lj6g3v1008150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1008150.1 Non Chatacterized Hit- tr|F6HBY3|F6HBY3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,78.99,0,seg,NULL; NUDIX,NUDIX hydrolase domain;
Peptidase_M49,NULL; Nudix,NUDIX hydrolase domain-like; no
de,CUFF.59105.1
         (777 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79690.1 | Symbols: atnudt3, NUDT3 | nudix hydrolase homolog ...  1138   0.0  
AT5G16440.1 | Symbols: IPP1 | isopentenyl diphosphate isomerase ...    55   2e-07
AT3G02780.1 | Symbols: IPP2, IPIAT1, IDI2 | isopentenyl pyrophos...    54   3e-07

>AT1G79690.1 | Symbols: atnudt3, NUDT3 | nudix hydrolase homolog 3 |
           chr1:29985360-29990171 FORWARD LENGTH=772
          Length = 772

 Score = 1138 bits (2944), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 544/767 (70%), Positives = 638/767 (83%), Gaps = 5/767 (0%)

Query: 16  FDVLTKEGHKTGISKPRGEVHRDGDYHRAVHVWIFAESTQQLLLQRRATCKDSWPDLWDI 75
           FDVLTK G KTG+SKPRGEVHRDGDYHRAVHVWIF E+TQQLLLQ R+  KDSWP  WDI
Sbjct: 6   FDVLTKSGEKTGVSKPRGEVHRDGDYHRAVHVWIFVETTQQLLLQLRSDDKDSWPGQWDI 65

Query: 76  SSAGHISAGDSSLFTARRELEEELGVTLPQDAFELIFIFLQECVINDGKFINNEYNDVYL 135
           SSAGHISAGD+SL +A+RELEEELGV LP+DAFE IF+FLQECV NDGKFINNE+NDVYL
Sbjct: 66  SSAGHISAGDTSLLSAQRELEEELGVKLPKDAFEKIFVFLQECVTNDGKFINNEFNDVYL 125

Query: 136 VTTIDPIPLEAFTLQETEVSEVKYISYEEYKRLLAKEDLDYVPYDVHGQYGQLFDIIEQR 195
           VT + PIPLEAFTLQ+ EVS VKY+ YEEY+  L+KED  YVPYDV+G+YG+LFDII QR
Sbjct: 126 VTILHPIPLEAFTLQKEEVSAVKYVPYEEYRNFLSKEDPAYVPYDVNGEYGKLFDIIRQR 185

Query: 196 YKENTVARSLALQKQLSRYAPISLNVELTGLTDSDKKALVSILKAAAVMDEIFYLQSWYS 255
            + NT ARSL+LQKQL RY+P++L  +LT L+++D+KAL  I+KAA +MD+IFY Q W S
Sbjct: 186 CQVNTEARSLSLQKQLQRYSPVTLEAKLTELSEADQKALGLIVKAAKIMDDIFYEQVWNS 245

Query: 256 NPALRDWLKEHADTSELNKLKWSYYLINKTPWSSLDEDEAFLTTADSAIRLLAKATKTVR 315
           NPALRDWLK+HA+ S+L+KLKW Y+ INK+PWSSLDE+EAFL+TADSA++LL  ATK + 
Sbjct: 246 NPALRDWLKDHANASKLDKLKWDYFTINKSPWSSLDENEAFLSTADSAVKLLPGATKAIA 305

Query: 316 EWKGLEYRAAFPVQKPAGANFYPPDMDKKEFEIWKESLGNDEQKEATSFFSVIKRHSEFI 375
            WKGLEYRAAFPV KP GANFYPPDMDK EF +W   L  +++  AT FFSVIKR SE  
Sbjct: 306 GWKGLEYRAAFPVTKPPGANFYPPDMDKMEFTLWLNGLTEEQKHAATGFFSVIKRRSEAN 365

Query: 376 LDS--HPSNSK---AGSSHDLYIVPYSQEYXXXXXXXXXXXXXXGDITDSPSLKSLLHGK 430
           LD+  H ++S      S+ DLY +PYS+ Y              GD+  SPSLK LLH K
Sbjct: 366 LDASDHLASSTKKLPDSNSDLYSIPYSEIYRPFLKKASEFLQKAGDLVSSPSLKKLLHSK 425

Query: 431 ADAFLSNDYYDSDIAWMELDSKLDITIGPYETYEDKLFGYKATFEAYIGIRDDEATAQLK 490
           A+AFLSN+YY+SDIAWM+LDSKLDITIGPYETYED++FGYKATFE +IGIRDD+ATA LK
Sbjct: 426 AEAFLSNEYYESDIAWMDLDSKLDITIGPYETYEDEIFGYKATFETFIGIRDDKATADLK 485

Query: 491 LFGDNLQLLEQNLPMDSAYKSKDVNAAPIRVIQLLYNAGDVGGPQTLAFNLPNDERIVND 550
           LFGDNL+LLE NLP++S YKS DV+AAPIRVIQL+YN+GDV GPQT+A+NLPNDE+IV D
Sbjct: 486 LFGDNLKLLEDNLPLESVYKSTDVSAAPIRVIQLIYNSGDVKGPQTVAYNLPNDEKIVKD 545

Query: 551 RGTSMVMLKNVSEAKFTHILLPIAAGCIALEQQELVDFESFFTHTICHECCHGIGPHTIT 610
           RGTSMVMLKNV EAKF HIL PIA   I+ EQ+ LVDF+SFFTHTICHECCHGIGPHTIT
Sbjct: 546 RGTSMVMLKNVQEAKFEHILKPIAEITISKEQRGLVDFDSFFTHTICHECCHGIGPHTIT 605

Query: 611 LPNGQKSTVRLELQEFHSALEEAKADIVGLWALRFLISQDLLSESLLKSMYVSFLAGCFR 670
           LP GQ STVR ELQE HSA+EEAKADIVGLWAL+FLI++ LLS+S+++SMYVSFLAGCFR
Sbjct: 606 LPGGQTSTVRKELQEVHSAMEEAKADIVGLWALKFLITKGLLSKSMVESMYVSFLAGCFR 665

Query: 671 SVRFGLEEAHGKGQALQFNWLYEKGAFVLHSEDTFSVDFSKVEGAVESLSTEILTIQAKG 730
           S+RFGL EAHGKGQALQFN+LYEKGAFV H + TFSVDF+K+EGAVESLS EILTIQ KG
Sbjct: 666 SIRFGLTEAHGKGQALQFNYLYEKGAFVFHEDSTFSVDFAKIEGAVESLSHEILTIQGKG 725

Query: 731 DKEAAGLLLQKYGVMTEALQVALKKLENIQVPVDVAPTFATANKILQ 777
           DK AA LLL KY  +T  L+ AL+ LE ++VPVD++PTF  A  ++ 
Sbjct: 726 DKNAATLLLNKYCTITGPLKTALENLERVKVPVDISPTFPLAEALMN 772


>AT5G16440.1 | Symbols: IPP1 | isopentenyl diphosphate isomerase 1 |
           chr5:5371765-5373575 FORWARD LENGTH=291
          Length = 291

 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 19/144 (13%)

Query: 42  HRAVHVWIFAESTQQLLLQRRATCKDSWPDLWDISSAGHISAGDSSLF---------TAR 92
           HRA  V++F  S  +LLLQ+R+  K ++P +W  +   H    +S L           A+
Sbjct: 111 HRAFSVFLF-NSKYELLLQQRSKTKVTFPLVWTNTCCSHPLYRESELIEENVLGVRNAAQ 169

Query: 93  RELEEELGVT---LPQDAFELIFIFLQECVINDGKFINNEYNDVYLVTTIDPIPLEAFTL 149
           R+L +ELG+    +P D F  +   L +   +DGK+  +E +  YL+  +  + L+    
Sbjct: 170 RKLFDELGIVAEDVPVDEFTPLGRMLYKAP-SDGKWGEHEVD--YLLFIVRDVKLQP--- 223

Query: 150 QETEVSEVKYISYEEYKRLLAKED 173
              EV+E+KY+S EE K L+ K D
Sbjct: 224 NPDEVAEIKYVSREELKELVKKAD 247


>AT3G02780.1 | Symbols: IPP2, IPIAT1, IDI2 | isopentenyl
           pyrophosphate:dimethylallyl pyrophosphate isomerase 2 |
           chr3:602578-604648 REVERSE LENGTH=284
          Length = 284

 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 19/144 (13%)

Query: 42  HRAVHVWIFAESTQQLLLQRRATCKDSWPDLWDISSAGHISAGDSSLF---------TAR 92
           HRA  V++F  S  +LLLQ+R+  K ++P +W  +   H    +S L           A+
Sbjct: 104 HRAFSVFLF-NSKYELLLQQRSNTKVTFPLVWTNTCCSHPLYRESELIQDNALGVRNAAQ 162

Query: 93  RELEEELGVT---LPQDAFELIFIFLQECVINDGKFINNEYNDVYLVTTIDPIPLEAFTL 149
           R+L +ELG+    +P D F  +   L +   +DGK+  +E +  YL+  +  + ++    
Sbjct: 163 RKLLDELGIVAEDVPVDEFTPLGRMLYKAP-SDGKWGEHELD--YLLFIVRDVKVQP--- 216

Query: 150 QETEVSEVKYISYEEYKRLLAKED 173
              EV+E+KY+S EE K L+ K D
Sbjct: 217 NPDEVAEIKYVSREELKELVKKAD 240