Miyakogusa Predicted Gene

Lj6g3v0963650.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0963650.1 tr|E9C288|E9C288_CAPO3 Predicted protein
OS=Capsaspora owczarzaki (strain ATCC 30864) GN=CAOG_02471
,29.37,0.00000006,Thioredoxin-like,Thioredoxin-like fold; no
description,Thioredoxin-like fold,CUFF.58736.1
         (160 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G57230.1 | Symbols:  | Thioredoxin superfamily protein | chr5...   257   2e-69

>AT5G57230.1 | Symbols:  | Thioredoxin superfamily protein |
           chr5:23190572-23191485 FORWARD LENGTH=160
          Length = 160

 Score =  257 bits (656), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 117/160 (73%), Positives = 141/160 (88%)

Query: 1   MEDSSFFDMMIGHLRSTCKYYTGYPKYLGPSRVIHFTSEREFVKLLHEGFPVVVAFTIRG 60
           M DS+F D M+  LRSTCKYY+GYPK LGPSRV+HFTSEREFV+LLH+G+PVVVAFTIR 
Sbjct: 1   MGDSTFLDRMLLQLRSTCKYYSGYPKDLGPSRVLHFTSEREFVQLLHQGYPVVVAFTIRS 60

Query: 61  SYTRHLDKVLDEAAAEFYPHVKFMRVECPKYPGFCITRQKKEYPFIEIFQSPTQAANQGK 120
           +YT+HLD++L+EAAAEFYP++KFMRVECPKYPGFCITRQK EYPFIEIF SP  A N+GK
Sbjct: 61  NYTQHLDRMLEEAAAEFYPNIKFMRVECPKYPGFCITRQKNEYPFIEIFHSPQHAGNEGK 120

Query: 121 VADPNVTKYNVKVLPFHNDVSAYGFREFFKRHGLWSPDLK 160
           V DPN+T+Y+VKV+P++ D+S YGFREFFKR G+ + D K
Sbjct: 121 VQDPNITRYSVKVVPYNYDMSPYGFREFFKRQGVRTSDPK 160