Miyakogusa Predicted Gene
- Lj6g3v0948300.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0948300.1 Non Chatacterized Hit- tr|F6HA19|F6HA19_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,88.55,0,REGULATOR OF CHROMOSOME CONDENSATION (RCC1),NULL;
REGULATOR OF CHROMOSOME CONDENSATION,NULL; no desc,CUFF.58715.1
(688 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G19420.1 | Symbols: | Regulator of chromosome condensation (... 1063 0.0
AT5G19420.2 | Symbols: | Regulator of chromosome condensation (... 1050 0.0
AT5G12350.1 | Symbols: | Regulator of chromosome condensation (... 1026 0.0
AT5G42140.1 | Symbols: | Regulator of chromosome condensation (... 745 0.0
AT1G76950.1 | Symbols: PRAF1 | Regulator of chromosome condensat... 726 0.0
AT1G69710.1 | Symbols: | Regulator of chromosome condensation (... 721 0.0
AT3G47660.1 | Symbols: | Regulator of chromosome condensation (... 654 0.0
AT3G23270.1 | Symbols: | Regulator of chromosome condensation (... 560 e-159
AT4G14368.1 | Symbols: | Regulator of chromosome condensation (... 554 e-158
AT1G65920.1 | Symbols: | Regulator of chromosome condensation (... 426 e-119
AT5G63860.1 | Symbols: UVR8 | Regulator of chromosome condensati... 188 1e-47
AT1G27060.1 | Symbols: | Regulator of chromosome condensation (... 151 1e-36
AT3G15430.2 | Symbols: | Regulator of chromosome condensation (... 135 8e-32
AT3G15430.1 | Symbols: | Regulator of chromosome condensation (... 135 8e-32
AT5G60870.1 | Symbols: | Regulator of chromosome condensation (... 130 5e-30
AT5G08710.1 | Symbols: | Regulator of chromosome condensation (... 128 1e-29
AT5G60870.2 | Symbols: | Regulator of chromosome condensation (... 123 4e-28
AT3G02510.1 | Symbols: | Regulator of chromosome condensation (... 120 3e-27
AT5G16040.1 | Symbols: | Regulator of chromosome condensation (... 120 4e-27
AT3G26100.2 | Symbols: | Regulator of chromosome condensation (... 112 9e-25
AT3G26100.1 | Symbols: | Regulator of chromosome condensation (... 109 5e-24
AT3G02300.1 | Symbols: | Regulator of chromosome condensation (... 106 5e-23
AT3G55580.1 | Symbols: | Regulator of chromosome condensation (... 102 7e-22
AT1G19880.1 | Symbols: | Regulator of chromosome condensation (... 99 1e-20
AT5G60870.3 | Symbols: | Regulator of chromosome condensation (... 99 1e-20
AT3G03790.1 | Symbols: | ankyrin repeat family protein / regula... 98 3e-20
AT3G03790.2 | Symbols: | ankyrin repeat family protein / regula... 97 3e-20
AT3G03790.3 | Symbols: | ankyrin repeat family protein / regula... 97 3e-20
AT3G53830.1 | Symbols: | Regulator of chromosome condensation (... 97 4e-20
AT3G02510.2 | Symbols: | Regulator of chromosome condensation (... 97 5e-20
AT5G11580.1 | Symbols: | Regulator of chromosome condensation (... 88 2e-17
AT5G48330.2 | Symbols: | Regulator of chromosome condensation (... 86 7e-17
AT5G48330.1 | Symbols: | Regulator of chromosome condensation (... 86 9e-17
>AT5G19420.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:6547945-6552866 REVERSE LENGTH=1105
Length = 1105
Score = 1063 bits (2749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/674 (76%), Positives = 559/674 (82%), Gaps = 3/674 (0%)
Query: 16 DPNRTGTAERDTEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKRLK 75
D +R G RD EQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEK LK
Sbjct: 11 DLSRAGPVTRDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLK 70
Query: 76 LTNVSRIISGQRTPIFQRYPRPEKEYQSFSLIYSDRSLDLICKDKDEAEVWFSGLKTLIS 135
L++VSRIISGQRTPIFQRYPRPEKEYQSFSLIY +RSLDLICKDKDEAEVWFSGLK LIS
Sbjct: 71 LSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYDERSLDLICKDKDEAEVWFSGLKALIS 130
Query: 136 RSHNRKWRTESRSDGIPSGANSPRTYTR-SSPLNSPFGSNESFQKDSGDHLPLHSPYESP 194
R H RKWRTESRSDG PS ANSPRTYTR SSPL+SPF SNESFQK+ +HL LHSPYESP
Sbjct: 131 RCHQRKWRTESRSDGTPSEANSPRTYTRRSSPLHSPFSSNESFQKEGSNHLRLHSPYESP 190
Query: 195 PKNGLDKAFSDVIYYPLPPKGFFPPXXXXXXXXXXXXXXXXXXXXXXKTMPMDAFRVXXX 254
PKNG+DKAFSD+ Y +PPKGFFPP K M MDAFRV
Sbjct: 191 PKNGVDKAFSDMSLYAVPPKGFFPPGSATMSVHSLSSGGSDTLHGHMKGMGMDAFRVSLS 250
Query: 255 XXXXXXXXXXXXXXXXXXXXVFIWXXXXXXXXXXXXAHQVGSCFDAKMDSLLPKALESAV 314
VF+W H+VGS + KMDSLLPKALES +
Sbjct: 251 SAISSSSHGSGHDDGDTLGDVFMWGEGIGEGVLGGGNHRVGSSLEIKMDSLLPKALESTI 310
Query: 315 VLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVA 374
VLDVQNIACGG+HA LV+KQGE FSWGEES GRLGHGVDS+V HPKLI++L++TNIELVA
Sbjct: 311 VLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVA 370
Query: 375 CGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWH 434
CGEYH+CAVTLSGDLYTWG G ++G+LGHGN+VSHW PKRV+ L+EGIHVSSI+CGP+H
Sbjct: 371 CGEYHSCAVTLSGDLYTWGKG--DFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYH 428
Query: 435 TAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVM 494
TAVVTSA QLFTFGDGTFGVLGHGDRKSV +PRE++SLKGLRTV+AACGVWHTAAVVEVM
Sbjct: 429 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVM 488
Query: 495 VGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTVAL 554
VG GKLFTWGDGDK RLGHGDKE KLVPTCV AL+EPNFCQVACGHS+TVAL
Sbjct: 489 VGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVAL 548
Query: 555 SRSGHVYTMGSCVYGQLGNPKADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYT 614
+ SGHVYTMGS VYGQLGNP ADGK+PTRV+GKL KSFVEEIACGAYHVAVLTSRTEVYT
Sbjct: 549 TTSGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYT 608
Query: 615 WGKGANGRLGHGDTDDKNSPTLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSG 674
WGKG+NGRLGHGD DD+NSPTLVE+LKDKQVKSIACG+NFTAA+CLHKW SG+DQSMCSG
Sbjct: 609 WGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVCLHKWASGMDQSMCSG 668
Query: 675 CRLPFNFKRKRHNC 688
CR PFNFKRKRHNC
Sbjct: 669 CRQPFNFKRKRHNC 682
>AT5G19420.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:6547945-6552981 REVERSE LENGTH=1139
Length = 1139
Score = 1050 bits (2716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/665 (76%), Positives = 553/665 (83%), Gaps = 3/665 (0%)
Query: 25 RDTEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKRLKLTNVSRIIS 84
++ AITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEK LKL++VSRIIS
Sbjct: 54 KNALHAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLKLSHVSRIIS 113
Query: 85 GQRTPIFQRYPRPEKEYQSFSLIYSDRSLDLICKDKDEAEVWFSGLKTLISRSHNRKWRT 144
GQRTPIFQRYPRPEKEYQSFSLIY +RSLDLICKDKDEAEVWFSGLK LISR H RKWRT
Sbjct: 114 GQRTPIFQRYPRPEKEYQSFSLIYDERSLDLICKDKDEAEVWFSGLKALISRCHQRKWRT 173
Query: 145 ESRSDGIPSGANSPRTYTR-SSPLNSPFGSNESFQKDSGDHLPLHSPYESPPKNGLDKAF 203
ESRSDG PS ANSPRTYTR SSPL+SPF SNESFQK+ +HL LHSPYESPPKNG+DKAF
Sbjct: 174 ESRSDGTPSEANSPRTYTRRSSPLHSPFSSNESFQKEGSNHLRLHSPYESPPKNGVDKAF 233
Query: 204 SDVIYYPLPPKGFFPPXXXXXXXXXXXXXXXXXXXXXXKTMPMDAFRVXXXXXXXXXXXX 263
SD+ Y +PPKGFFPP K M MDAFRV
Sbjct: 234 SDMSLYAVPPKGFFPPGSATMSVHSLSSGGSDTLHGHMKGMGMDAFRVSLSSAISSSSHG 293
Query: 264 XXXXXXXXXXXVFIWXXXXXXXXXXXXAHQVGSCFDAKMDSLLPKALESAVVLDVQNIAC 323
VF+W H+VGS + KMDSLLPKALES +VLDVQNIAC
Sbjct: 294 SGHDDGDTLGDVFMWGEGIGEGVLGGGNHRVGSSLEIKMDSLLPKALESTIVLDVQNIAC 353
Query: 324 GGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVACGEYHTCAV 383
GG+HA LV+KQGE FSWGEES GRLGHGVDS+V HPKLI++L++TNIELVACGEYH+CAV
Sbjct: 354 GGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHSCAV 413
Query: 384 TLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWHTAVVTSAVQ 443
TLSGDLYTWG G ++G+LGHGN+VSHW PKRV+ L+EGIHVSSI+CGP+HTAVVTSA Q
Sbjct: 414 TLSGDLYTWGKG--DFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQ 471
Query: 444 LFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGXXXXXXX 503
LFTFGDGTFGVLGHGDRKSV +PRE++SLKGLRTV+AACGVWHTAAVVEVMVG
Sbjct: 472 LFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNC 531
Query: 504 XXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTVALSRSGHVYTM 563
GKLFTWGDGDK RLGHGDKE KLVPTCV AL+EPNFCQVACGHS+TVAL+ SGHVYTM
Sbjct: 532 SSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTM 591
Query: 564 GSCVYGQLGNPKADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRL 623
GS VYGQLGNP ADGK+PTRV+GKL KSFVEEIACGAYHVAVLTSRTEVYTWGKG+NGRL
Sbjct: 592 GSPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRL 651
Query: 624 GHGDTDDKNSPTLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNFKR 683
GHGD DD+NSPTLVE+LKDKQVKSIACG+NFTAA+CLHKW SG+DQSMCSGCR PFNFKR
Sbjct: 652 GHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVCLHKWASGMDQSMCSGCRQPFNFKR 711
Query: 684 KRHNC 688
KRHNC
Sbjct: 712 KRHNC 716
>AT5G12350.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:3995789-4000545 FORWARD LENGTH=1075
Length = 1075
Score = 1026 bits (2654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/674 (74%), Positives = 551/674 (81%), Gaps = 6/674 (0%)
Query: 16 DPNRTGTAERDTEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKRLK 75
D +R G ERD EQAI ALKKGAYLLKYGRRGKPKFCPFRLSNDE+VLIWFSG EEK LK
Sbjct: 10 DLSRAGPVERDIEQAIIALKKGAYLLKYGRRGKPKFCPFRLSNDETVLIWFSGNEEKHLK 69
Query: 76 LTNVSRIISGQRTPIFQRYPRPEKEYQSFSLIYSDRSLDLICKDKDEAEVWFSGLKTLIS 135
L++VSRIISGQRTPIFQRYPRPEKEYQSFSLIYS+RSLD+ICKDKDEAEVWF+GLK LIS
Sbjct: 70 LSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYSERSLDVICKDKDEAEVWFTGLKALIS 129
Query: 136 RSHNRKWRTESRSDGIPSGANSPRTYTR-SSPLNSPFGSNESFQKDSGDHLPLHSPYESP 194
H R RTESRSDG PS ANSPRTYTR SSPL+SPF SN+S QKD +HL +HSP+ESP
Sbjct: 130 HCHQRNRRTESRSDGTPSEANSPRTYTRRSSPLHSPFSSNDSLQKDGSNHLRIHSPFESP 189
Query: 195 PKNGLDKAFSDVIYYPLPPKGFFPPXXXXXXXXXXXXXXXXXXXXXXKTMPMDAFRVXXX 254
PKNGLDKAFSD+ Y +PPKGF+P + M MDAFRV
Sbjct: 190 PKNGLDKAFSDMALYAVPPKGFYP---SDSATISVHSGGSDSMHGHMRGMGMDAFRVSMS 246
Query: 255 XXXXXXXXXXXXXXXXXXXXVFIWXXXXXXXXXXXXAHQVGSCFDAKMDSLLPKALESAV 314
VFIW +VGS FD KMDSLLPKALES +
Sbjct: 247 SAVSSSSHGSGHDDGDALGDVFIWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALESTI 306
Query: 315 VLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVA 374
VLDVQNIACGG+HA LV+KQGE FSWGEES GRLGHGVDS++ PKLI++L++TNIELVA
Sbjct: 307 VLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVA 366
Query: 375 CGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWH 434
CGE+H+CAVTLSGDLYTWG G ++G+LGHGN+VSHW PKRV+ LLEGIHVSSI+CGP+H
Sbjct: 367 CGEFHSCAVTLSGDLYTWGKG--DFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYH 424
Query: 435 TAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVM 494
TAVVTSA QLFTFGDGTFGVLGHGD+KSV +PRE++SLKGLRTV+AACGVWHTAAVVEVM
Sbjct: 425 TAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVM 484
Query: 495 VGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTVAL 554
VG GKLFTWGDGDKGRLGHG+KE KLVPTCV AL+EPNFCQVACGHS+TVAL
Sbjct: 485 VGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVAL 544
Query: 555 SRSGHVYTMGSCVYGQLGNPKADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYT 614
+ SGHVYTMGS VYGQLGN ADGK P RVEGKL KSFVEEIACGAYHVAVLTSRTEVYT
Sbjct: 545 TTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYT 604
Query: 615 WGKGANGRLGHGDTDDKNSPTLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSG 674
WGKG+NGRLGHGD DD+NSPTLVE+LKDKQVKSIACGTNFTAA+C+H+W SG+DQSMCSG
Sbjct: 605 WGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVCIHRWASGMDQSMCSG 664
Query: 675 CRLPFNFKRKRHNC 688
CR PF+FKRKRHNC
Sbjct: 665 CRQPFSFKRKRHNC 678
>AT5G42140.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:16837547-16841640 REVERSE LENGTH=1073
Length = 1073
Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/662 (57%), Positives = 456/662 (68%), Gaps = 31/662 (4%)
Query: 29 QAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKRLKLTNVSRIISGQRT 88
QA+ ALKKGA LLKYGR+GKPKFCPFRLSNDE+ LIW S EKRLKL VS+I+ GQRT
Sbjct: 11 QALIALKKGAQLLKYGRKGKPKFCPFRLSNDETSLIWISNGGEKRLKLATVSKIVPGQRT 70
Query: 89 PIFQRYPRPEKEYQSFSLIYSDR--SLDLICKDKDEAEVWFSGLKTLISRSHNRKWRTES 146
+FQRY RP+K+Y SFSLIYS+R +LDLICKDK EAEVW +GLK LIS R + +
Sbjct: 71 AVFQRYLRPDKDYLSFSLIYSNRKRTLDLICKDKVEAEVWIAGLKALISGQAGRS-KIDG 129
Query: 147 RSDGIPSGANSPRTYTRSSPLNSPFGSNESFQKDSGDHLPLHSPYESPPKNGLDKAFSDV 206
SDG S A+S R T SSP NS ++ F + + P S +N + S V
Sbjct: 130 WSDGGLSIADS-RDLTLSSPTNSSVCASRDFNIADSPYNSTNFPRTSRTENSVSSERSHV 188
Query: 207 IYYPLPPKGFFPPXXXXXXXXXXXXXXXXXXXXXXKTMPMDAFRVXXXXXXXXXXXXXXX 266
+ DAFRV
Sbjct: 189 --------------------------ASDSPNMLVRGTGSDAFRVSVSSVQSSSSHGSAP 222
Query: 267 XXXXXXXXVFIWXXXXXXXXXXXXAHQVGSCFDAKMDSLLPKALESAVVLDVQNIACGGK 326
V+IW A + ++ D L+PK LES VVLDV +IACG K
Sbjct: 223 DDCDALGDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVHHIACGVK 282
Query: 327 HAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVACGEYHTCAVTLS 386
HAALVS+QGE+F+WGE SGGRLGHG+ DV P+LIESL++T+I+ VACGE+HTCAVT++
Sbjct: 283 HAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMT 342
Query: 387 GDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWHTAVVTSAVQLFT 446
G++YTWGDGT+N GLLGHG VSHW PKR+ G LEG+ ++S+SCGPWHTA++TS QLFT
Sbjct: 343 GEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFT 402
Query: 447 FGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGXXXXXXXXXG 506
FGDGTFGVLGHGD+++V PRE+ESL GLRT+ ACGVWH AA+VEV+V G
Sbjct: 403 FGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIV-THSSSSVSSG 461
Query: 507 KLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTVALSRSGHVYTMGSC 566
KLFTWGDGDK RLGHGDKE +L PTCV AL++ F +VACGHS+TV L+ SG VYTMGS
Sbjct: 462 KLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGST 521
Query: 567 VYGQLGNPKADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHG 626
VYGQLGNP ADGKLP VE KL+K VEEIACGAYHVAVLTSR EV+TWGKGANGRLGHG
Sbjct: 522 VYGQLGNPNADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHG 581
Query: 627 DTDDKNSPTLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNFKRKRH 686
D +D+ +PTLV+ALK++ VK+IACG+NFTAAICLHKWVSG +QS CS CR F F RKRH
Sbjct: 582 DVEDRKAPTLVDALKERHVKNIACGSNFTAAICLHKWVSGTEQSQCSACRQAFGFTRKRH 641
Query: 687 NC 688
NC
Sbjct: 642 NC 643
>AT1G76950.1 | Symbols: PRAF1 | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:28906952-28911325 FORWARD LENGTH=1103
Length = 1103
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/670 (55%), Positives = 450/670 (67%), Gaps = 27/670 (4%)
Query: 22 TAERDTEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKRLKLTNVSR 81
A+ + EQA+ LKKG LLKYGR+GKPKF PFRLS+DE LIW S EKRLKL +VS+
Sbjct: 9 NADHNLEQALITLKKGTQLLKYGRKGKPKFYPFRLSSDEKSLIWISSSGEKRLKLASVSK 68
Query: 82 IISGQRTPIFQRYPRPEKEYQSFSLIYS--DRSLDLICKDKDEAEVWFSGLKTLISRSHN 139
I+ GQRT +FQRY RPEK+Y SFSL+Y+ +SLDLICKDK EAE+W GLKTLIS
Sbjct: 69 IVPGQRTAVFQRYLRPEKDYLSFSLLYNGKKKSLDLICKDKVEAEIWIGGLKTLISTGQG 128
Query: 140 RKWRTESRSDGIPSGANSPRTYTRSSPLNSPFGSNESFQKDSGDHLPLHSPYESPPKNGL 199
+ S+ DG G S S L S S+ S G P +P+ P
Sbjct: 129 GR----SKIDGWSGGGLS---VDASRELTSSSPSSSSASASRGHSSP-GTPFNIDP---- 176
Query: 200 DKAFSDVIYYPLPPKGFFPPXXXXXXXXXXXXXXXXXXXXXXKTMPMDAFRVXXXXXXXX 259
I P + PP K D FRV
Sbjct: 177 -------ITSPKSAEPEVPPTDSEKSHVALDNKNMQT-----KVSGSDGFRVSVSSAQSS 224
Query: 260 XXXXXXXXXXXXXXXVFIWXXXXXXXXXXXXAHQVGSCFDAKMDSLLPKALESAVVLDVQ 319
V+IW + S + D L+PK LES +VLDV
Sbjct: 225 SSHGSAADDSDALGDVYIWGEVICDNVVKVGIDKNASYLTTRTDVLVPKPLESNIVLDVH 284
Query: 320 NIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLIESLSSTN-IELVACGEY 378
IACG +HAA V++QGEIF+WGEESGGRLGHG+ DV HP+L+ESL++T+ ++ VACGE+
Sbjct: 285 QIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEF 344
Query: 379 HTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWHTAVV 438
HTCAVTL+G+LYTWGDGT+N GLLGHG+ +SHW PKR+ G LEG+HV+S+SCGPWHTA++
Sbjct: 345 HTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHTALI 404
Query: 439 TSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGXX 498
TS +LFTFGDGTFGVLGHGD+++V PRE+ESL GLRT+ +CGVWHTAAVVE++V
Sbjct: 405 TSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQS 464
Query: 499 XXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTVALSRSG 558
GKLFTWGDGDK RLGHGDK+ +L PTCV AL++ NF ++ACGHS+TV L+ SG
Sbjct: 465 NSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSG 524
Query: 559 HVYTMGSCVYGQLGNPKADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKG 618
V+TMGS VYGQLGN + DGKLP VE KL+ FVEEI+CGAYHVA LTSR EVYTWGKG
Sbjct: 525 QVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKG 584
Query: 619 ANGRLGHGDTDDKNSPTLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLP 678
ANGRLGHGD +D+ PT+VEALKD+ VK IACG+N+TAAICLHKWVSG +QS CS CRL
Sbjct: 585 ANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICLHKWVSGAEQSQCSTCRLA 644
Query: 679 FNFKRKRHNC 688
F F RKRHNC
Sbjct: 645 FGFTRKRHNC 654
>AT1G69710.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:26222325-26226530 FORWARD LENGTH=1041
Length = 1041
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/674 (53%), Positives = 453/674 (67%), Gaps = 17/674 (2%)
Query: 16 DPNRTGTAERDTEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKRLK 75
D RT +ERD EQAIT+LKKG+YLLKYGRRGKPKFCPF+L++DES L+W+SGKEEK++K
Sbjct: 16 DSLRTSFSERDVEQAITSLKKGSYLLKYGRRGKPKFCPFQLTSDESALVWYSGKEEKQIK 75
Query: 76 LTNVSRIISGQRTPIFQRYPRPEKEYQSFSLIYSDRSLDLICKDKDEAEVWFSGLKTLIS 135
L+ V RI+ GQRTP F+RYPRPEKEYQSFSLI DRSLDLICKDKDEAEVW GLK+LI+
Sbjct: 76 LSQVLRIVPGQRTPTFKRYPRPEKEYQSFSLICPDRSLDLICKDKDEAEVWVVGLKSLIT 135
Query: 136 RSHNRKWRTESRSDGIPSGANSPRTYTRSSPLNSPFGSNESFQKDSGDHLPLHSPYESPP 195
R KW+T + + + +P R SP + D + + E+
Sbjct: 136 RVKVSKWKTTIKPEITSAECPTPHAR-RVSPFVTIL-----------DQV-IQPSNETST 182
Query: 196 KNGLDKAFSDVIYYPLPPKGFFPPXXXXXXXXXXXXXXXXXXXXXXKTMPMDAFRVXXXX 255
+ L K FSD++ PP + D FR+
Sbjct: 183 QTRLGKVFSDIVAITAPPSNNNQTEASGNLFCPFSPTPANVENSNLRFSTNDPFRLSLSS 242
Query: 256 XXXXXXXXXXXXXXXXXXXVFIWXXXXXXXXXXXXAHQVGSCFDAKMDSLLPKALESAVV 315
VF+W + + S + D+LLPKALES +V
Sbjct: 243 AVSTSSHGSYHEDFDALGDVFVWGESISDGVLSGTGNSLNSTTE---DALLPKALESTIV 299
Query: 316 LDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVAC 375
LD QNIACG HA LV+KQGEIFSWGE GG+LGHG+++D PK I S+ + +AC
Sbjct: 300 LDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLAC 359
Query: 376 GEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWHT 435
G++HTCA+T SGDLY+WGDGT+N LLGHGN+ S W PKRV G L+G++VS ++CGPWHT
Sbjct: 360 GDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHT 419
Query: 436 AVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVM- 494
AVV S+ QLFTFGDGTFG LGHGDR+S S+PRE+ESL GL + ACGVWHTAAVVEV
Sbjct: 420 AVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTN 479
Query: 495 VGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTVAL 554
G++FTWGDG+KG+LGHGD + KL+P CV++L N CQVACGHS+TV+
Sbjct: 480 EASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQVACGHSLTVSR 539
Query: 555 SRSGHVYTMGSCVYGQLGNPKADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYT 614
+ GHVYTMGS YGQLGNP A G P RVEG + ++ VEEIACG+YHVAVLTS++E+YT
Sbjct: 540 TSRGHVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYT 599
Query: 615 WGKGANGRLGHGDTDDKNSPTLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSG 674
WGKG NG+LGHG+ ++K P +V L++KQVK+I CG+NFTA IC+HKWV G + S+C+G
Sbjct: 600 WGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITCGSNFTAVICVHKWVPGSEHSLCAG 659
Query: 675 CRLPFNFKRKRHNC 688
CR PFNF+RKRHNC
Sbjct: 660 CRNPFNFRRKRHNC 673
>AT3G47660.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:17571192-17574805 FORWARD
LENGTH=954
Length = 954
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/677 (50%), Positives = 433/677 (63%), Gaps = 31/677 (4%)
Query: 19 RTGTAERDTEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKRLKLTN 78
R+ +R+ EQAI LKKGAYLLKYGRRGKPKF PFRLS+DE L+W+ GK+EKRLKL++
Sbjct: 9 RSVPTDRENEQAIAILKKGAYLLKYGRRGKPKFYPFRLSSDEIYLLWYCGKKEKRLKLSS 68
Query: 79 VSRIISGQRTPIFQRYPRPEKEYQSFSLIYSDRSLDLICKDKDEAEVWFSGLKTLISRSH 138
V+RII GQRT +F+RYP+P KEYQSFSLIY +RSLDL DKDEAE W + L+ L+SR++
Sbjct: 69 VTRIIPGQRTAVFRRYPQPTKEYQSFSLIYGERSLDL---DKDEAEFWLTTLRALLSRNN 125
Query: 139 NRKWRTESRSDGI-PSGANSPRTYTRSSPLNSPFGSNESFQ----KDSGDHLPLHSPYES 193
+ SRS + P + S S+ S++ K SG H +
Sbjct: 126 SSALVLHSRSRSLAPENGEQSSSSQNSKSNIRSVSSDTSYEEHAKKASGSHC------NT 179
Query: 194 PPKNGLDKAFSDVIYYPLPPKGFFPPXXXXXXXXXXXXXXXXXXXXXXKTMP-MDAFRVX 252
P + L K FS+V+ K + P +D +
Sbjct: 180 PQR--LGKVFSEVLSQTAVLKAL--SLDELVHKPHTSPPETIENRPTNHSSPGVDTSKYS 235
Query: 253 XXXXXXXXXXXXXXXXXXXXXXVFIWXXXXXXXXXXXXAHQVGSCFDAKMDSLLPKALES 312
VF+W H+ GS DS LPK L+S
Sbjct: 236 ISSAVSSSSQGSTFEDLKSLCDVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKS 295
Query: 313 AVVLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIEL 372
V LD Q+I+CG +A LV+KQG+++SWGEESGGRLGHGV S VPHPKLI+ + + +EL
Sbjct: 296 HVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVEL 355
Query: 373 VACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGP 432
CGE+HTCAVT SGDLY WGDG +N GLLG G+ SHW P R+ G +EGI+V +ISCGP
Sbjct: 356 ADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGP 415
Query: 433 WHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVE 492
WHTA VTS +LFTFGDGTFG LGHGDR S ++PRE+E+L G RT++AACGVWH+AAVV
Sbjct: 416 WHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVS 475
Query: 493 VMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTV 552
V GKLFTWGDGD GRLGHGD E +L+P+CV L +F QVACG S+TV
Sbjct: 476 VF-----GEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITV 530
Query: 553 ALSRSGHVYTMGSCVYGQLGNPKAD-GKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTE 611
ALS SG VY MG+ +P D + P+ +EG L KSFV+E+ACG +H+AVL S+ E
Sbjct: 531 ALSMSGQVYAMGT------ADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAE 584
Query: 612 VYTWGKGANGRLGHGDTDDKNSPTLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 671
VYTWGKG+NG+LGHGDT+ + PTLV+ALK KQV+ + CG+N+TA ICLHK ++G D +
Sbjct: 585 VYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGTDSTK 644
Query: 672 CSGCRLPFNFKRKRHNC 688
CSGCR PFN+ RK HNC
Sbjct: 645 CSGCRHPFNYMRKLHNC 661
>AT3G23270.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr3:8316436-8320337 FORWARD LENGTH=1045
Length = 1045
Score = 560 bits (1442), Expect = e-159, Method: Compositional matrix adjust.
Identities = 252/388 (64%), Positives = 313/388 (80%), Gaps = 2/388 (0%)
Query: 301 KMDSLLPKALESAVVLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPK 360
K D L P+ LES VVLDV I CG +H ALV++QGE+F+WGEE GGRLGHG+ D+ PK
Sbjct: 236 KTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPK 295
Query: 361 LIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLL 420
L+E L+ TNI+ VACGEYHTC V+ SGDL++WGDG +N GLLGHG+ +SHW PKRV G L
Sbjct: 296 LVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPL 355
Query: 421 EGIHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQA 480
EG+ V S++CG WH+A+ T+ +LFTFGDG FGVLGHG+R+SVS P+E++SL GL+TV+
Sbjct: 356 EGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKV 415
Query: 481 ACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPN 540
AC +WHTAA+VEVM KLFTWGDGDK RLGHG+KE L+PTCV +L++ N
Sbjct: 416 ACSIWHTAAIVEVM--GQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYN 473
Query: 541 FCQVACGHSMTVALSRSGHVYTMGSCVYGQLGNPKADGKLPTRVEGKLSKSFVEEIACGA 600
F ++ACGH+ TVAL+ SGHV+TMG +GQLGN +DGKLP V+ +L FVEEIACGA
Sbjct: 474 FHKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGA 533
Query: 601 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNSPTLVEALKDKQVKSIACGTNFTAAICL 660
+HVAVLTSR+EV+TWGKGANGRLGHGDT+DK +PTLVEAL+D+ VKS++CG+NFT++IC+
Sbjct: 534 HHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGSNFTSSICI 593
Query: 661 HKWVSGVDQSMCSGCRLPFNFKRKRHNC 688
HKWVSG DQS+CSGCR F F RKRHNC
Sbjct: 594 HKWVSGADQSICSGCRQAFGFTRKRHNC 621
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/124 (62%), Positives = 92/124 (74%), Gaps = 6/124 (4%)
Query: 24 ERDTEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKRLKLTNVSRII 83
ERD +QA+ LKKG LLKY R+GKPKF FRLS DE LIWFS EEK LKL VSRI+
Sbjct: 12 ERDVDQALVVLKKGTQLLKYSRKGKPKFRAFRLSPDEKTLIWFSRGEEKGLKLFEVSRIV 71
Query: 84 SGQRTPIFQRYPRPEKEYQSFSLIYS--DRSLDLICKDKDEAEVWFSGLKTLISRSHNRK 141
GQRT R+ RPEK++ SFSL+Y+ +RSLDLICKDK E EVWF+ LK LI +S NR+
Sbjct: 72 PGQRT----RFLRPEKDHLSFSLLYNNRERSLDLICKDKAETEVWFAALKFLIEKSRNRR 127
Query: 142 WRTE 145
R+E
Sbjct: 128 ARSE 131
>AT4G14368.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr4:8274279-8278810 REVERSE
LENGTH=1106
Length = 1106
Score = 554 bits (1428), Expect = e-158, Method: Compositional matrix adjust.
Identities = 251/389 (64%), Positives = 314/389 (80%), Gaps = 2/389 (0%)
Query: 300 AKMDSLLPKALESAVVLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHP 359
K+D L+PK LES VVLDV IACG +H ALV++QGE+F+W EE+GGRLGHG+ DV P
Sbjct: 254 VKIDVLIPKPLESNVVLDVHQIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRP 313
Query: 360 KLIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGL 419
KL+E L+ TNI+ VACGEYHTCAV+ SGDL+TWGDG +N GLLGHG+ +SHW PKRV G
Sbjct: 314 KLVEFLALTNIDFVACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGP 373
Query: 420 LEGIHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQ 479
+EG+ V S++CG WH+A+ T+ +LFTFGDG FGVLGHGDR+SVS P+E++ L GL+T++
Sbjct: 374 VEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLK 433
Query: 480 AACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEP 539
ACGVWHT A+VEVM KLFTWGDGDK RLGHG+KE L+PTCV +L++
Sbjct: 434 VACGVWHTVAIVEVM--NQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY 491
Query: 540 NFCQVACGHSMTVALSRSGHVYTMGSCVYGQLGNPKADGKLPTRVEGKLSKSFVEEIACG 599
NF Q+ACGH+ TVAL+ SGHV+TMG +GQLG+ +DGKLP V+ +L FVEEI+CG
Sbjct: 492 NFNQIACGHTFTVALTTSGHVFTMGGTSHGQLGSSNSDGKLPCLVQDRLVGEFVEEISCG 551
Query: 600 AYHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNSPTLVEALKDKQVKSIACGTNFTAAIC 659
+HVAVLTSR+EV+TWGKG+NGRLGHGD DD+ +PTLVEAL+++ VKSI+CG+NFT++IC
Sbjct: 552 DHHVAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRERHVKSISCGSNFTSSIC 611
Query: 660 LHKWVSGVDQSMCSGCRLPFNFKRKRHNC 688
+HKWVSG DQS+CSGCR F F RKRHNC
Sbjct: 612 IHKWVSGADQSVCSGCRQAFGFTRKRHNC 640
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 99/132 (75%), Gaps = 2/132 (1%)
Query: 16 DPNRTGTAERDTEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKRLK 75
DP+ +RD +QA+ +LKKG LLKY R+G+PKF FRLS DE+ L W S EEK LK
Sbjct: 8 DPSSYVNHDRDIDQALVSLKKGTQLLKYSRKGRPKFRSFRLSPDETTLFWLSHGEEKGLK 67
Query: 76 LTNVSRIISGQRTPIFQRYPRPEKEYQSFSLIY--SDRSLDLICKDKDEAEVWFSGLKTL 133
L VSRI+ GQRT +F+RY RPEK+Y SFSLIY DRSLDLICKDK E EVWF+GLK+L
Sbjct: 68 LATVSRILPGQRTAVFRRYLRPEKDYLSFSLIYHNGDRSLDLICKDKAETEVWFAGLKSL 127
Query: 134 ISRSHNRKWRTE 145
I ++ N++ ++E
Sbjct: 128 IRQNRNKQAKSE 139
>AT1G65920.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:24525267-24529204 REVERSE LENGTH=1006
Length = 1006
Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/388 (54%), Positives = 274/388 (70%), Gaps = 8/388 (2%)
Query: 303 DSLLPKALESAVVLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLI 362
D+L PK LESA + DVQ+I+ G KHAALV++QGE+F WG + G+LG V+ D+ HPK +
Sbjct: 279 DALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRV 338
Query: 363 ESLSSTNIELVACGEYHTCAVTLSGDLYTWG-DGTYNYGLLGHGNQVSHWAPKRVHGLLE 421
ESL + VAC ++ TCAVT SG+LY WG DG G + S + +++ +L
Sbjct: 339 ESLEDVAVRSVACSDHQTCAVTESGELYLWGIDG----GTIEQSG--SQFLTRKISDVLG 392
Query: 422 G-IHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQA 480
G + V S++CG WHTA+VTS+ QLFT+G GTFGVLGHG +SV+ P+E+ESL+ ++ +
Sbjct: 393 GSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISV 452
Query: 481 ACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPN 540
+CG WHTAA+VE GKLFTWGDGDKGRLGH D + KLVPTCV L++ +
Sbjct: 453 SCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHD 512
Query: 541 FCQVACGHSMTVALSRSGHVYTMGSCVYGQLGNPKADGKLPTRVEGKLSKSFVEEIACGA 600
F +V+CG ++TVALS SG VYTMGS ++GQLG P+A K V G L++ FV++IA G+
Sbjct: 513 FIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGS 572
Query: 601 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNSPTLVEALKDKQVKSIACGTNFTAAICL 660
+HVAVLTS VYTWGKG NG+LG GD D+NSP LVE L D+ V+SIACG N TAAICL
Sbjct: 573 HHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGLNLTAAICL 632
Query: 661 HKWVSGVDQSMCSGCRLPFNFKRKRHNC 688
HK +S DQ+ CS C+ F F R++HNC
Sbjct: 633 HKEISLNDQTACSSCKSAFGFTRRKHNC 660
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/143 (52%), Positives = 101/143 (70%), Gaps = 3/143 (2%)
Query: 24 ERDTEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKRLKLTNVSRII 83
+R EQAI ALKKGA LLK RRG PKFCPF+LS DE LIW+SG+EE++L+L++V I+
Sbjct: 13 DRTDEQAILALKKGAQLLKCRRRGNPKFCPFKLSMDEKYLIWYSGEEERQLRLSSVITIV 72
Query: 84 SGQRTPIFQRYPRPEKEYQSFSLIYS--DRSLDLICKDKDEAEVWFSGLKTLISRSHNRK 141
GQ TP FQ+ + +++ QSFSLIY+ + +LDLICKDK +A+ WF GL+ +I++ HN +
Sbjct: 73 RGQITPNFQKQAQSDRKEQSFSLIYANGEHTLDLICKDKAQADSWFKGLRAVITKHHNIR 132
Query: 142 WRTESRSD-GIPSGANSPRTYTR 163
RS G S NSP + R
Sbjct: 133 NSVNHRSSRGAQSCINSPAGFMR 155
>AT5G63860.1 | Symbols: UVR8 | Regulator of chromosome condensation
(RCC1) family protein | chr5:25554821-25558587 REVERSE
LENGTH=440
Length = 440
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/369 (34%), Positives = 186/369 (50%), Gaps = 22/369 (5%)
Query: 321 IACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVACGEYHT 380
I+ G H+ + + SWG G+LGHG D P P + +L I V CG HT
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79
Query: 381 CAVTLSG-DLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWHTAVVT 439
A + SG ++Y+WG G ++G LGHGN + P + L GI + I+CG H VT
Sbjct: 80 VAYSQSGMEVYSWGWG--DFGRLGHGNSSDLFTPLPIKAL-HGIRIKQIACGDSHCLAVT 136
Query: 440 SAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGXXX 499
++ ++G G LG GD + +P++I++ +G+R A G HTAAV E
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 189
Query: 500 XXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTVALSRSGH 559
G L+ WG G G LG GD+ +LVP V + VACG T+++S SG
Sbjct: 190 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 244
Query: 560 VYTMGSCVYGQLGNPK-ADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKG 618
+YT G YGQLG+ D +P ++E LS SF+ +I+ G H LTS ++Y WG
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALTSDGKLYGWGWN 303
Query: 619 ANGRLGHGDTDDKNSPTLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVDQSMCSG 674
G++G G+ D+ SP V D++V ++CG T A+ + W G + + G
Sbjct: 304 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIG 363
Query: 675 CRLPFNFKR 683
+ NF +
Sbjct: 364 ESVDRNFPK 372
Score = 182 bits (461), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 172/336 (51%), Gaps = 18/336 (5%)
Query: 307 PKALESAVVLDVQNIACGGKHAALVSKQG-EIFSWGEESGGRLGHGVDSDVPHPKLIESL 365
P L + + ++ CG H S+ G E++SWG GRLGHG SD+ P I++L
Sbjct: 58 PTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKAL 117
Query: 366 SSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHV 425
I+ +ACG+ H AVT+ G++ +WG G LG G+ P+++ EGI +
Sbjct: 118 HGIRIKQIACGDSHCLAVTMEGEVQSWG--RNQNGQLGLGDTEDSLVPQKIQAF-EGIRI 174
Query: 426 SSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVW 485
++ G HTA VT L+ +G G +G LG GDR +P + S G + ACG
Sbjct: 175 KMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWR 234
Query: 486 HTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVA 545
HT +V G L+T+G G+LGHGD E L+P + AL Q++
Sbjct: 235 HTISV------------SYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQIS 282
Query: 546 CGHSMTVALSRSGHVYTMGSCVYGQLG-NPKADGKLPTRVEGKLSKSFVEEIACGAYHVA 604
G T+AL+ G +Y G +GQ+G D P +V + V+ ++CG H
Sbjct: 283 GGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ-VSCGWRHTL 341
Query: 605 VLTSRTEVYTWGKGANGRLGHGDTDDKNSPTLVEAL 640
+T R V+ WG+G NG+LG G++ D+N P ++EAL
Sbjct: 342 AVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 377
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 303 DSLLPKALESAVVLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLI 362
D P +++ + ++ IACG H V+ +GE+ SWG G+LG G D P+ I
Sbjct: 107 DLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKI 166
Query: 363 ESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEG 422
++ I++VA G HT AVT GDLY WG G YG LG G++ P+RV G
Sbjct: 167 QAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWG--RYGNLGLGDRTDRLVPERVTS-TGG 223
Query: 423 IHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAAC 482
+S ++CG HT V+ + L+T+G +G LGHGD + +P ++E+L Q +
Sbjct: 224 EKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISG 283
Query: 483 GVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFC 542
G HT A+ GKL+ WG G++G G+ + P V +
Sbjct: 284 GWRHTMALTS------------DGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVV 331
Query: 543 QVACGHSMTVALSRSGHVYTMGSCVYGQLG-NPKADGKLPTRVE 585
QV+CG T+A++ +V+ G GQLG D P +E
Sbjct: 332 QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIE 375
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 93/173 (53%), Gaps = 5/173 (2%)
Query: 301 KMDSLLPKALESAVVLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPK 360
+ D L+P+ + S + +ACG +H VS G ++++G G+LGHG D P
Sbjct: 209 RTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH 268
Query: 361 LIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYN-YGLLGHGNQVSHWAPKRVHGL 419
+E+LS++ I ++ G HT A+T G LY WG +N +G +G GN + +P +V
Sbjct: 269 KLEALSNSFISQISGGWRHTMALTSDGKLYGWG---WNKFGQVGVGNNLDQCSPVQVR-F 324
Query: 420 LEGIHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESL 472
+ V +SCG HT VT +F +G GT G LG G+ + P+ IE+L
Sbjct: 325 PDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 377
>AT1G27060.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr1:9395023-9396673 FORWARD
LENGTH=386
Length = 386
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/368 (33%), Positives = 186/368 (50%), Gaps = 39/368 (10%)
Query: 303 DSLLPKALESAVVLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLI 362
D LLP+ L + + +ACGG H ++ G++F+WG S G+LGHG ++ PKL+
Sbjct: 35 DELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSSGQLGHGDILNITLPKLV 94
Query: 363 ESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEG 422
+ I A G H+ V+ SG ++T G+G+ +G LGHG+ +S P +V
Sbjct: 95 SFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGS--FGQLGHGDTLSLSTPAKVS-HFNN 151
Query: 423 IHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGH-GDR-KSVSLPREIESLKGLRTVQA 480
V ++CG H+ V+ + Q+ FG G G LG DR KSV+LP + LK + V+
Sbjct: 152 DSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRI 211
Query: 481 ACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPN 540
+ H+AA+ G+ F+WG +G G D A P + + L +
Sbjct: 212 SANGDHSAAI------------SADGQFFSWG---RGFCGGPDVHA---PQSLPSPL--S 251
Query: 541 FCQVACGHSMTVALSRSGHVYTMGSCVYGQLGNPKADGKLPTRVEGKLSK--SF----VE 594
F +VA G + + L+ G V+ +GS + Q P+ E K F V
Sbjct: 252 FREVAVGWNHALLLTVDGEVFKLGSTLNKQ---PEKQQLQIDSSEALFEKVPDFDGVKVM 308
Query: 595 EIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNSPTLVEA----LKDKQVKSIAC 650
+IA GA H A +T EV TWG G +G+LG G+T+D+ SP LV L+ K++K + C
Sbjct: 309 QIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTSPELVSLGSIDLRTKEIK-VYC 367
Query: 651 GTNFTAAI 658
G+ FT A+
Sbjct: 368 GSGFTYAV 375
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 106/220 (48%), Gaps = 18/220 (8%)
Query: 443 QLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQA-ACGVWHTAAVVEVMVGXXXXX 501
Q++++G GT G LG + LP ++ SL L ++ ACG H A+
Sbjct: 16 QVWSWGAGTDGQLGTTKLQDELLP-QLLSLTSLPSISMLACGGAHVIALTS--------- 65
Query: 502 XXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTVALSRSGHVY 561
GK+FTWG G G+LGHGD +P V + Q A G S + +S SG ++
Sbjct: 66 ---GGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIF 122
Query: 562 TMGSCVYGQLGNPKADG-KLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGAN 620
T G+ +GQLG+ P +V + V+ +ACG H VL + +V +G G
Sbjct: 123 TCGNGSFGQLGHGDTLSLSTPAKVS-HFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKR 181
Query: 621 GRLGHGDTDDK--NSPTLVEALKDKQVKSIACGTNFTAAI 658
G+LG K N P +V LKD +V I+ + +AAI
Sbjct: 182 GQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAI 221
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 4/179 (2%)
Query: 507 KLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTVALSRSGHVYTMGSC 566
++++WG G G+LG + +L+P + P+ +ACG + +AL+ G V+T G
Sbjct: 16 QVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRG 75
Query: 567 VYGQLGNPKADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHG 626
GQLG+ ++ S + + A G H ++ ++T G G+ G+LGHG
Sbjct: 76 SSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHG 135
Query: 627 DTDDKNSPTLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNFKRKR 685
DT ++P V + VK +ACG + + V G SG R F R
Sbjct: 136 DTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCG----FGSGKRGQLGFSSDR 190
>AT3G15430.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:5209408-5211562 FORWARD
LENGTH=488
Length = 488
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 152/326 (46%), Gaps = 22/326 (6%)
Query: 317 DVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVP--HPKLIESLSSTNIELVA 374
V ++ H+A V + G++ + G+ S GH +D+ P PKL+E+L T + VA
Sbjct: 164 QVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGH-LDTSRPIFRPKLVEALKGTPCKQVA 222
Query: 375 CGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWH 434
G + T ++ G YT G T+ G LGHG+ + PK V L V I+ GP +
Sbjct: 223 AGLHFTVFLSREGHAYTCGSNTH--GQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSY 280
Query: 435 TAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESL--KGLRTVQAACGVWHTAAVVE 492
VT +++FG G+ LGHG+++ PR I++ KG+ ++ + G H A+
Sbjct: 281 VLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVAL-- 338
Query: 493 VMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTV 552
G+++TWG G G LGHGD+ K+ P +V L QV T
Sbjct: 339 ----------DSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTF 388
Query: 553 ALSRSGHVYTMGSCVYGQLGNPK---ADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSR 609
L G +Y G +G LG P +D L RV L V +++ G YH V+T R
Sbjct: 389 VLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQR 448
Query: 610 TEVYTWGKGANGRLGHGDTDDKNSPT 635
++ +G +LGH PT
Sbjct: 449 GRIFGFGDNERAQLGHDSLRGCLEPT 474
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 143/317 (45%), Gaps = 23/317 (7%)
Query: 331 VSKQGEIFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVACGEYHTCAVTLSGDLY 390
++ Q E+F+ E + RL + S ++E+ S +A G+YHT + S
Sbjct: 76 LTTQKELFANCEGNWKRLFSFLQSVEQSSDMVET--SQGKMQIATGKYHTLLINNS---K 130
Query: 391 TWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWHTAVVTSAVQLFTFGDG 450
+ G G+L HG++ + V+ +S H+A V + Q+ T GD
Sbjct: 131 VYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQSGQVLTCGDN 190
Query: 451 TFGVLGHGD-RKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGXXXXXXXXXGKLF 509
+ GH D + + P+ +E+LKG Q A G+ T + G +
Sbjct: 191 SSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFL------------SREGHAY 238
Query: 510 TWGDGDKGRLGHGDKEAKLVPTCVVALLEP--NFCQVACGHSMTVALSRSGHVYTMGSCV 567
T G G+LGHGD + VP VV L+ Q+A G S +A+++ G VY+ GS
Sbjct: 239 TCGSNTHGQLGHGDTLDRPVPK-VVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGS 297
Query: 568 YGQLGNPKADGKLPTRVEGKLSKSFVE--EIACGAYHVAVLTSRTEVYTWGKGANGRLGH 625
LG+ + +L RV + + ++ G H L S VYTWGKG G LGH
Sbjct: 298 NFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGH 357
Query: 626 GDTDDKNSPTLVEALKD 642
GD +DK +P ++ L +
Sbjct: 358 GDENDKITPQVLVNLNN 374
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 135/284 (47%), Gaps = 20/284 (7%)
Query: 307 PKALESAVVLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLIESLS 366
PK +E+ + +A G +S++G ++ G + G+LGHG D P PK++E L
Sbjct: 207 PKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLK 266
Query: 367 STN-IELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGL-LEGIH 424
+ + +A G + AVT G +Y++G G+ N+ LGHG Q P+ + +GIH
Sbjct: 267 TIGPVVQIAAGPSYVLAVTQDGSVYSFGSGS-NF-CLGHGEQQDELQPRVIQAFKRKGIH 324
Query: 425 VSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGV 484
+ +S G H + S +++T+G G G LGHGD P+ + +L VQ
Sbjct: 325 ILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARK 384
Query: 485 WHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDK--EAKLVPTCVVALLEPN-F 541
T +VE G L+ +G G LG D+ K++ V+ L+P+
Sbjct: 385 RKTFVLVE------------GGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRV 432
Query: 542 CQVACGHSMTVALSRSGHVYTMGSCVYGQLGNPKADGKL-PTRV 584
QV+ G T+ +++ G ++ G QLG+ G L PT +
Sbjct: 433 SQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI 476
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 115/246 (46%), Gaps = 27/246 (10%)
Query: 414 KRVHGLLEGIHVSS-----------ISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKS 462
KR+ L+ + SS I+ G +HT ++ ++ ++++ G GVL HG +
Sbjct: 91 KRLFSFLQSVEQSSDMVETSQGKMQIATGKYHTLLINNS-KVYSCGVSLSGVLAHGSETT 149
Query: 463 VSLP-REIESLKGLRTVQAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGH 521
+ IE + Q + H+A V++ G++ T GD GH
Sbjct: 150 QCVAFTPIEFPFPAQVAQVSATQNHSAFVLQ------------SGQVLTCGDNSSHCCGH 197
Query: 522 GDKEAKLVPTCVVALLEPNFC-QVACGHSMTVALSRSGHVYTMGSCVYGQLGNPKA-DGK 579
D + +V L+ C QVA G TV LSR GH YT GS +GQLG+ D
Sbjct: 198 LDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRP 257
Query: 580 LPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNSPTLVEA 639
+P VE + V +IA G +V +T VY++G G+N LGHG+ D+ P +++A
Sbjct: 258 VPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQA 317
Query: 640 LKDKQV 645
K K +
Sbjct: 318 FKRKGI 323
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 87/173 (50%), Gaps = 6/173 (3%)
Query: 301 KMDSLLPKALESAVV--LDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPH 358
+ D L P+ +++ + + ++ G +HA + G +++WG+ G LGHG ++D
Sbjct: 306 QQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKIT 365
Query: 359 PKLIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQ-VSHWAPK-RV 416
P+++ +L++ + + C V + G L +G G +G LG ++ VS + RV
Sbjct: 366 PQVLVNLNNC-LAVQVCARKRKTFVLVEGGLL-YGFGWMGFGSLGFPDRGVSDKVLRPRV 423
Query: 417 HGLLEGIHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREI 469
L+ VS +S G +HT VVT ++F FGD LGH + P EI
Sbjct: 424 LECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI 476
>AT3G15430.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:5209408-5211562 FORWARD
LENGTH=488
Length = 488
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 152/326 (46%), Gaps = 22/326 (6%)
Query: 317 DVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVP--HPKLIESLSSTNIELVA 374
V ++ H+A V + G++ + G+ S GH +D+ P PKL+E+L T + VA
Sbjct: 164 QVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGH-LDTSRPIFRPKLVEALKGTPCKQVA 222
Query: 375 CGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWH 434
G + T ++ G YT G T+ G LGHG+ + PK V L V I+ GP +
Sbjct: 223 AGLHFTVFLSREGHAYTCGSNTH--GQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSY 280
Query: 435 TAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESL--KGLRTVQAACGVWHTAAVVE 492
VT +++FG G+ LGHG+++ PR I++ KG+ ++ + G H A+
Sbjct: 281 VLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVAL-- 338
Query: 493 VMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTV 552
G+++TWG G G LGHGD+ K+ P +V L QV T
Sbjct: 339 ----------DSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTF 388
Query: 553 ALSRSGHVYTMGSCVYGQLGNPK---ADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSR 609
L G +Y G +G LG P +D L RV L V +++ G YH V+T R
Sbjct: 389 VLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQR 448
Query: 610 TEVYTWGKGANGRLGHGDTDDKNSPT 635
++ +G +LGH PT
Sbjct: 449 GRIFGFGDNERAQLGHDSLRGCLEPT 474
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 143/317 (45%), Gaps = 23/317 (7%)
Query: 331 VSKQGEIFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVACGEYHTCAVTLSGDLY 390
++ Q E+F+ E + RL + S ++E+ S +A G+YHT + S
Sbjct: 76 LTTQKELFANCEGNWKRLFSFLQSVEQSSDMVET--SQGKMQIATGKYHTLLINNS---K 130
Query: 391 TWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWHTAVVTSAVQLFTFGDG 450
+ G G+L HG++ + V+ +S H+A V + Q+ T GD
Sbjct: 131 VYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQSGQVLTCGDN 190
Query: 451 TFGVLGHGD-RKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGXXXXXXXXXGKLF 509
+ GH D + + P+ +E+LKG Q A G+ T + G +
Sbjct: 191 SSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFL------------SREGHAY 238
Query: 510 TWGDGDKGRLGHGDKEAKLVPTCVVALLEP--NFCQVACGHSMTVALSRSGHVYTMGSCV 567
T G G+LGHGD + VP VV L+ Q+A G S +A+++ G VY+ GS
Sbjct: 239 TCGSNTHGQLGHGDTLDRPVPK-VVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGS 297
Query: 568 YGQLGNPKADGKLPTRVEGKLSKSFVE--EIACGAYHVAVLTSRTEVYTWGKGANGRLGH 625
LG+ + +L RV + + ++ G H L S VYTWGKG G LGH
Sbjct: 298 NFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGH 357
Query: 626 GDTDDKNSPTLVEALKD 642
GD +DK +P ++ L +
Sbjct: 358 GDENDKITPQVLVNLNN 374
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 135/284 (47%), Gaps = 20/284 (7%)
Query: 307 PKALESAVVLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLIESLS 366
PK +E+ + +A G +S++G ++ G + G+LGHG D P PK++E L
Sbjct: 207 PKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLK 266
Query: 367 STN-IELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGL-LEGIH 424
+ + +A G + AVT G +Y++G G+ N+ LGHG Q P+ + +GIH
Sbjct: 267 TIGPVVQIAAGPSYVLAVTQDGSVYSFGSGS-NF-CLGHGEQQDELQPRVIQAFKRKGIH 324
Query: 425 VSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGV 484
+ +S G H + S +++T+G G G LGHGD P+ + +L VQ
Sbjct: 325 ILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARK 384
Query: 485 WHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDK--EAKLVPTCVVALLEPN-F 541
T +VE G L+ +G G LG D+ K++ V+ L+P+
Sbjct: 385 RKTFVLVE------------GGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRV 432
Query: 542 CQVACGHSMTVALSRSGHVYTMGSCVYGQLGNPKADGKL-PTRV 584
QV+ G T+ +++ G ++ G QLG+ G L PT +
Sbjct: 433 SQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI 476
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 115/246 (46%), Gaps = 27/246 (10%)
Query: 414 KRVHGLLEGIHVSS-----------ISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKS 462
KR+ L+ + SS I+ G +HT ++ ++ ++++ G GVL HG +
Sbjct: 91 KRLFSFLQSVEQSSDMVETSQGKMQIATGKYHTLLINNS-KVYSCGVSLSGVLAHGSETT 149
Query: 463 VSLP-REIESLKGLRTVQAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGH 521
+ IE + Q + H+A V++ G++ T GD GH
Sbjct: 150 QCVAFTPIEFPFPAQVAQVSATQNHSAFVLQ------------SGQVLTCGDNSSHCCGH 197
Query: 522 GDKEAKLVPTCVVALLEPNFC-QVACGHSMTVALSRSGHVYTMGSCVYGQLGNPKA-DGK 579
D + +V L+ C QVA G TV LSR GH YT GS +GQLG+ D
Sbjct: 198 LDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRP 257
Query: 580 LPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNSPTLVEA 639
+P VE + V +IA G +V +T VY++G G+N LGHG+ D+ P +++A
Sbjct: 258 VPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQA 317
Query: 640 LKDKQV 645
K K +
Sbjct: 318 FKRKGI 323
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 87/173 (50%), Gaps = 6/173 (3%)
Query: 301 KMDSLLPKALESAVV--LDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPH 358
+ D L P+ +++ + + ++ G +HA + G +++WG+ G LGHG ++D
Sbjct: 306 QQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKIT 365
Query: 359 PKLIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQ-VSHWAPK-RV 416
P+++ +L++ + + C V + G L +G G +G LG ++ VS + RV
Sbjct: 366 PQVLVNLNNC-LAVQVCARKRKTFVLVEGGLL-YGFGWMGFGSLGFPDRGVSDKVLRPRV 423
Query: 417 HGLLEGIHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREI 469
L+ VS +S G +HT VVT ++F FGD LGH + P EI
Sbjct: 424 LECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI 476
>AT5G60870.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:24485788-24487771 REVERSE
LENGTH=445
Length = 445
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 162/350 (46%), Gaps = 44/350 (12%)
Query: 336 EIFSWGEESGGRLGHGVDSDVPHPKLIESL---SSTNIEL-----------------VAC 375
++FSWG + G+LG G++ +P + +L S + L ++C
Sbjct: 49 QLFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGISC 108
Query: 376 GEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWHT 435
G +H+ +T+ GDL+ WG G + G LG G + S + P ++ L E + I+ G H+
Sbjct: 109 GLFHS-GLTIDGDLWIWGKG--DGGRLGFGQENSVFVPN-LNPLFEEHSIRCIALGGLHS 164
Query: 436 AVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMV 495
+T +FT+G G FG LGH +PR ++ + A HTAA+ E
Sbjct: 165 VALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITE--- 221
Query: 496 GXXXXXXXXXGKLFTWG--DGDKGRLGH-----GDKEAKLVPTCVVALLEPNFCQVACGH 548
G+L+ WG +GD + VP+ V AL P V+CG
Sbjct: 222 ---------SGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVP-VASVSCGG 271
Query: 549 SMTVALSRSGHVYTMGSCVYGQLGNPKADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTS 608
T+AL++ G ++ G+ +LG G L + +IACG YH LT
Sbjct: 272 FFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTE 331
Query: 609 RTEVYTWGKGANGRLGHGDTDDKNSPTLVEALKDKQVKSIACGTNFTAAI 658
+V +WG G +G+LG ++ PT +EAL DK++ IA G + +AAI
Sbjct: 332 EGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAI 381
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 145/309 (46%), Gaps = 34/309 (11%)
Query: 318 VQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVACGE 377
++ IA GG H+ ++ QG++F+WG G LGH V + P+ ++ I +A
Sbjct: 154 IRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSG 213
Query: 378 YHTCAVTLSGDLYTW----GDGTYNYGLLGHGNQVSHWA-PKRVHGLLEGIHVSSISCGP 432
HT A+T SG+LY W GDG G N+ + P +V L + V+S+SCG
Sbjct: 214 THTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT--VPVASVSCGG 271
Query: 433 WHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVE 492
+ T +T QL+ +G + LG GD P + SL+G+R Q ACG +H+ A+ E
Sbjct: 272 FFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTE 331
Query: 493 VMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTV 552
GK+ +WG G G+LG + VPT + AL + +A G S +
Sbjct: 332 ------------EGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSA 379
Query: 553 ALSRSGHVYTMGSCVYGQLGNPKADGKLPTRVEGKLSKSFVEE-----------IACGAY 601
A++ G ++ G+ QLG P LP + +F+ E I+ GA
Sbjct: 380 AITDGGELWMWGNAKDFQLGVP----GLPEIQTTPVEVNFLTEEDECQPHKVISISIGAS 435
Query: 602 HVAVLTSRT 610
H L SR+
Sbjct: 436 HALCLVSRS 444
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 169/355 (47%), Gaps = 35/355 (9%)
Query: 321 IACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVACGEYHT 380
I+CG H+ L + G+++ WG+ GGRLG G ++ V P L +I +A G H+
Sbjct: 106 ISCGLFHSGL-TIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHS 164
Query: 381 CAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWHTAVVTS 440
A+T GD++TWG G +G LGH P+RV + +S+I+ HTA +T
Sbjct: 165 VALTHQGDVFTWGYG--GFGALGHKVYTRELVPRRVDDSWD-CKISAIATSGTHTAAITE 221
Query: 441 AVQLFTFG-------DGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEV 493
+ +L+ +G G G + +S+P ++++L + +CG + T A+ +
Sbjct: 222 SGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTK- 279
Query: 494 MVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTVA 553
G+L+ WG LG GD P V +L Q+ACG ++A
Sbjct: 280 -----------EGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLA 328
Query: 554 LSRSGHVYTMGSCVYGQLGNPKA-DGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEV 612
L+ G V + G +GQLG+ + K+PT +E K V IA G A +T E+
Sbjct: 329 LTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIV-FIASGGSSSAAITDGGEL 387
Query: 613 YTWGKGANGRLG-HGDTDDKNSPTLVEALKDK------QVKSIACGTNFTAAICL 660
+ WG + +LG G + + +P V L ++ +V SI+ G + A+CL
Sbjct: 388 WMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASH--ALCL 440
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 120/247 (48%), Gaps = 24/247 (9%)
Query: 305 LLPKALESAVVLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPH------ 358
L+P+ ++ + + IA G H A +++ GE++ WG E G P+
Sbjct: 193 LVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLS 252
Query: 359 -PKLIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVH 417
P +++L + + V+CG + T A+T G L+ WG + NY LG G+ + W P V
Sbjct: 253 VPSKVKAL-TVPVASVSCGGFFTMALTKEGQLWNWGANS-NY-ELGRGDNLGGWEPMPVP 309
Query: 418 GLLEGIHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRT 477
LEG+ ++ I+CG +H+ +T ++ ++G G G LG ++ +P EIE+L +
Sbjct: 310 S-LEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKI 368
Query: 478 VQAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLG-HGDKEAKLVPTCVVAL 536
V A G +AA+ + G+L+ WG+ +LG G E + P V L
Sbjct: 369 VFIASGGSSSAAITD------------GGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFL 416
Query: 537 LEPNFCQ 543
E + CQ
Sbjct: 417 TEEDECQ 423
>AT5G08710.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:2834858-2837866 REVERSE
LENGTH=434
Length = 434
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 177/390 (45%), Gaps = 51/390 (13%)
Query: 301 KMDSLLPKALESAVV-LDVQNIACGGKHAALVSKQGEIFSWGEESGGRLG-HGVDSDVPH 358
+DS A+ SA+ + +ACGG H +++ +F+ G G+LG V S
Sbjct: 66 NLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMD 125
Query: 359 PKLIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWA--PKRV 416
P + L +I ++ G YH+ A+T+ G+LY WG + G LG G + + P +V
Sbjct: 126 PLEVSGLDK-DILHISAGYYHSAAITVDGELYMWGKNSS--GQLGLGKKAARVVRVPTKV 182
Query: 417 HGLLEGIHVSSISCGPWHTAVVTSAVQLFTFG------------DGTFGVLGHGDRKSVS 464
L GI + S++ G H+ VT ++ ++G FG+L S
Sbjct: 183 EAL-HGITIQSVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGIL---RSNSEF 238
Query: 465 LPREIESLKGLRTVQAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDK 524
PR I+ L+G++ A G+ H+A E G F +G+ ++G G
Sbjct: 239 TPRLIKELEGIKVTNVAAGLLHSACTDE------------NGSAFMFGEKSINKMGFGGV 286
Query: 525 EAKLVPTCVVALLEPNFCQVACGHSMTVALSRSGHVYTMGSCVYGQLGNPKA-DGKLPTR 583
P+ + + P +VACG T ++R G +YT GS G LG P R
Sbjct: 287 RNATTPSIISEV--PYAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVR 344
Query: 584 VEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDK 631
VEG +S V +++CG H A + S V+TWG G + G+LGHG D
Sbjct: 345 VEGPFLESTVSQVSCGWKHTAAI-SDNNVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDY 403
Query: 632 NSPTLVEALKDKQVKSIACGTNFTAAICLH 661
P +V+ K+ + I+CG N TAA+ H
Sbjct: 404 ARPAMVDLGKNVRAVHISCGFNHTAAVLEH 433
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 143/333 (42%), Gaps = 15/333 (4%)
Query: 332 SKQGEIFS--WGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVACGEYHTCAVTLSGDL 389
S+ G+ F+ WG GRLG G P + +LS +I VACG HT +T + +
Sbjct: 44 SESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRV 103
Query: 390 YTWGDGTYNYGLLGHGNQVSH-WAPKRVHGLLEGIHVSSISCGPWHTAVVTSAVQLFTFG 448
+ G + G LG + SH P V GL + I IS G +H+A +T +L+ +G
Sbjct: 104 FA--TGLNDCGQLGVSDVKSHAMDPLEVSGLDKDI--LHISAGYYHSAAITVDGELYMWG 159
Query: 449 DGTFGVLGHGDR--KSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGXXXXXXXXXG 506
+ G LG G + + V +P ++E+L G+ A G H+ AV + G G
Sbjct: 160 KNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTD---GGEVLSWGGGG 216
Query: 507 KLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTVALSRSGHVYTMGSC 566
G ++ P + L VA G + +G + G
Sbjct: 217 SGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEK 276
Query: 567 VYGQLGNPKADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHG 626
++G + ++ + EE+ACG YH V+T E+YTWG NG LG
Sbjct: 277 SINKMGFGGVRNATTPSIISEVP--YAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTD 334
Query: 627 DTDDKNSPTLVEA-LKDKQVKSIACGTNFTAAI 658
T +SP VE + V ++CG TAAI
Sbjct: 335 STYVSHSPVRVEGPFLESTVSQVSCGWKHTAAI 367
>AT5G60870.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:24485788-24487564 REVERSE
LENGTH=383
Length = 383
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 148/312 (47%), Gaps = 24/312 (7%)
Query: 359 PKLIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHG 418
P I++ SS+ ++CG +H+ +T+ GDL+ WG G + G LG G + S + P ++
Sbjct: 23 PGRIDADSSSFRIGISCGLFHS-GLTIDGDLWIWGKG--DGGRLGFGQENSVFVPN-LNP 78
Query: 419 LLEGIHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTV 478
L E + I+ G H+ +T +FT+G G FG LGH +PR ++ +
Sbjct: 79 LFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKIS 138
Query: 479 QAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWG--DGDKGRLGH-----GDKEAKLVPT 531
A HTAA+ E G+L+ WG +GD + VP+
Sbjct: 139 AIATSGTHTAAITE------------SGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPS 186
Query: 532 CVVALLEPNFCQVACGHSMTVALSRSGHVYTMGSCVYGQLGNPKADGKLPTRVEGKLSKS 591
V AL P V+CG T+AL++ G ++ G+ +LG G L
Sbjct: 187 KVKALTVP-VASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGV 245
Query: 592 FVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNSPTLVEALKDKQVKSIACG 651
+ +IACG YH LT +V +WG G +G+LG ++ PT +EAL DK++ IA G
Sbjct: 246 RITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASG 305
Query: 652 TNFTAAICLHKW 663
+ +AAI W
Sbjct: 306 GSSSAAITGWDW 317
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 170/361 (47%), Gaps = 40/361 (11%)
Query: 321 IACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVACGEYHT 380
I+CG H+ L + G+++ WG+ GGRLG G ++ V P L +I +A G H+
Sbjct: 37 ISCGLFHSGL-TIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHS 95
Query: 381 CAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWHTAVVTS 440
A+T GD++TWG G +G LGH P+RV + +S+I+ HTA +T
Sbjct: 96 VALTHQGDVFTWGYG--GFGALGHKVYTRELVPRRVDDSWD-CKISAIATSGTHTAAITE 152
Query: 441 AVQLFTFG-------DGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEV 493
+ +L+ +G G G + +S+P ++++L + +CG + T A+ +
Sbjct: 153 SGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTK- 210
Query: 494 MVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTVA 553
G+L+ WG LG GD P V +L Q+ACG ++A
Sbjct: 211 -----------EGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLA 259
Query: 554 LSRSGHVYTMGSCVYGQLGNPKA-DGKLPTRVEGKLSKSFVEEIACGAYHVAV------L 606
L+ G V + G +GQLG+ + K+PT +E K V + G+ A+ L
Sbjct: 260 LTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITGWDWFL 319
Query: 607 TSRTEVYTWGKGANGRLG-HGDTDDKNSPTLVEALKDK------QVKSIACGTNFTAAIC 659
T E++ WG + +LG G + + +P V L ++ +V SI+ G + A+C
Sbjct: 320 TDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASH--ALC 377
Query: 660 L 660
L
Sbjct: 378 L 378
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 145/316 (45%), Gaps = 41/316 (12%)
Query: 318 VQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVACGE 377
++ IA GG H+ ++ QG++F+WG G LGH V + P+ ++ I +A
Sbjct: 85 IRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSG 144
Query: 378 YHTCAVTLSGDLYTW----GDGTYNYGLLGHGNQVSHWA-PKRVHGLLEGIHVSSISCGP 432
HT A+T SG+LY W GDG G N+ + P +V L + V+S+SCG
Sbjct: 145 THTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT--VPVASVSCGG 202
Query: 433 WHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVE 492
+ T +T QL+ +G + LG GD P + SL+G+R Q ACG +H+ A+ E
Sbjct: 203 FFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTE 262
Query: 493 VMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTV 552
GK+ +WG G G+LG + VPT + AL + +A G S +
Sbjct: 263 ------------EGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSA 310
Query: 553 A-------LSRSGHVYTMGSCVYGQLGNPKADGKLPTRVEGKLSKSFVEE---------- 595
A L+ G ++ G+ QLG P LP + +F+ E
Sbjct: 311 AITGWDWFLTDGGELWMWGNAKDFQLGVP----GLPEIQTTPVEVNFLTEEDECQPHKVI 366
Query: 596 -IACGAYHVAVLTSRT 610
I+ GA H L SR+
Sbjct: 367 SISIGASHALCLVSRS 382
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 119/247 (48%), Gaps = 17/247 (6%)
Query: 305 LLPKALESAVVLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPH------ 358
L+P+ ++ + + IA G H A +++ GE++ WG E G P+
Sbjct: 124 LVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLS 183
Query: 359 -PKLIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVH 417
P +++L + + V+CG + T A+T G L+ WG + NY LG G+ + W P V
Sbjct: 184 VPSKVKAL-TVPVASVSCGGFFTMALTKEGQLWNWGANS-NY-ELGRGDNLGGWEPMPVP 240
Query: 418 GLLEGIHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRT 477
LEG+ ++ I+CG +H+ +T ++ ++G G G LG ++ +P EIE+L +
Sbjct: 241 S-LEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKI 299
Query: 478 VQAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLG-HGDKEAKLVPTCVVAL 536
V A G +AA+ G+L+ WG+ +LG G E + P V L
Sbjct: 300 VFIASGGSSSAAIT-----GWDWFLTDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFL 354
Query: 537 LEPNFCQ 543
E + CQ
Sbjct: 355 TEEDECQ 361
>AT3G02510.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:522086-524536 REVERSE
LENGTH=393
Length = 393
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 151/329 (45%), Gaps = 50/329 (15%)
Query: 306 LPKALESAVVLDVQNIACGGKHAALVSKQGEIFSWGEESGGR---------LGHGVDSDV 356
+P +++ + + A GG H V QG ++WG G+ +G V D+
Sbjct: 81 IPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDI 140
Query: 357 PHPKLIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRV 416
PK + VA G H+ +T G ++TWG + G + Q+S P RV
Sbjct: 141 VIPK--RCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ-PWPPGDI---KQIS--VPVRV 192
Query: 417 HGLLEGIHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLR 476
GL +V I+ G +H + +L +G+ +G LG GD + S P ++ L L
Sbjct: 193 QGLE---NVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLT 249
Query: 477 TVQAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGD--KEAKLVPTCVV 534
V A G WH+ A+ + G+++ WG G+ GRLG GD K +K+VP V
Sbjct: 250 LVDIAAGGWHSTALTD------------KGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVN 297
Query: 535 ALLEPNFCQVACGHSMTVALSRSGHVYTMGSCVYGQLGNPKADG-----KLPTRV---EG 586
L E + QV+CG + +VAL+R G +++ G +G+LG + +LP ++ EG
Sbjct: 298 LLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEG 357
Query: 587 KLSKSFVEE--------IACGAYHVAVLT 607
+ + EE IACG H +
Sbjct: 358 SFNHTDEEEEGKWSAKSIACGGRHTLAIV 386
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 163/372 (43%), Gaps = 49/372 (13%)
Query: 318 VQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPH-PKLIESLSSTNIELVACG 376
V+++ G +++ + G +F+WG G LGH ++ + P +++L++ I A G
Sbjct: 40 VRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIG 99
Query: 377 EYHTCAVTLSGDLYTWGDGTYNY-------GLLGHGNQVSHWAPKRVHGLLEGIHVSSIS 429
+H AV G Y WG Y +G + PKR L V ++
Sbjct: 100 GWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLT---VRQVA 156
Query: 430 CGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAA 489
G H+ V+T ++T+G GD K +S+P ++ L+ +R + A G +H A
Sbjct: 157 AGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLENVRLI--AVGAFHNLA 210
Query: 490 VVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHS 549
+ E G+L WG+ + G+LG GD + P V L + +A G
Sbjct: 211 LEE------------DGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGW 258
Query: 550 MTVALSRSGHVYTMGSCVYGQLG---NPKADGKLPTRVEGKLSKSFVEEIACGAYHVAVL 606
+ AL+ G VY G +G+LG N K+ +P +V L++ + +++CG H L
Sbjct: 259 HSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVN-LLAEEDIIQVSCGGTHSVAL 317
Query: 607 TSRTEVYTWGKGANGRLGHGDTDDKNSP----------------TLVEALKDKQVKSIAC 650
T ++++G+G +GRLG+G P T E KSIAC
Sbjct: 318 TRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSAKSIAC 377
Query: 651 GTNFTAAICLHK 662
G T AI K
Sbjct: 378 GGRHTLAIVEWK 389
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 145/336 (43%), Gaps = 39/336 (11%)
Query: 337 IFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGT 396
I +WG G+LG G + + ++E+L ++ V G ++ A+ G ++TWG
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWG--- 63
Query: 397 YNY-GLLGHGNQV-SHWAPKRVHGLLEGIHVSSISCGPWHTAVVTSAVQLFTFGDGTFGV 454
+N G LGH + + P RV L + ++ + G WH V + + +G +G
Sbjct: 64 WNQRGTLGHQPETKTENIPSRVKALAN-VKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 122
Query: 455 ---------LGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGXXXXXXXXX 505
+G R+ + +P+ +R Q A G H+ +
Sbjct: 123 CGEEPLKDEMGRPVRRDIVIPKRCAPKLTVR--QVAAGGTHSVVLTR------------E 168
Query: 506 GKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTVALSRSGHVYTMGS 565
G ++TWG GD + VP V L N +A G +AL G + G+
Sbjct: 169 GHVWTWGQ----PWPPGDIKQISVPVRVQGL--ENVRLIAVGAFHNLALEEDGRLLAWGN 222
Query: 566 CVYGQLGNPKAD-GKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLG 624
YGQLG P V+G + V+ IA G +H LT + EVY WG+G +GRLG
Sbjct: 223 NEYGQLGTGDTQPTSHPVPVQGLDDLTLVD-IAAGGWHSTALTDKGEVYGWGRGEHGRLG 281
Query: 625 HGDTD--DKNSPTLVEALKDKQVKSIACGTNFTAAI 658
GD D K P V L ++ + ++CG + A+
Sbjct: 282 LGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVAL 317
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 17/192 (8%)
Query: 317 DVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVACG 376
+V+ IA G H + + G + +WG G+LG G HP ++ L + +A G
Sbjct: 197 NVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAG 256
Query: 377 EYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWHTA 436
+H+ A+T G++Y WG G + LG ++ S P++V+ LL + +SCG H+
Sbjct: 257 GWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVN-LLAEEDIIQVSCGGTHSV 315
Query: 437 VVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREI---------------ESLKGLRTVQA- 480
+T ++F+FG G G LG+G + + P E+ E +G + ++
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSAKSI 375
Query: 481 ACGVWHTAAVVE 492
ACG HT A+VE
Sbjct: 376 ACGGRHTLAIVE 387
>AT5G16040.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:5240860-5243308 REVERSE
LENGTH=396
Length = 396
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 157/332 (47%), Gaps = 33/332 (9%)
Query: 306 LPKALESAVVLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPH-PKLIES 364
L +++ +V+++ G +++ + G++F+WG G LGH ++ P L++S
Sbjct: 28 LASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKS 87
Query: 365 LSSTNIELVACGEYHTCAVTLSGDLYTWGDGTY-------NYGLLGHGNQVSHWAPKRVH 417
L++ I A G +H AV G Y WG Y + G + PKR
Sbjct: 88 LANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRC- 146
Query: 418 GLLEGIHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRT 477
+ + V ++ G H+ V+T ++T+G GD K +S+P ++ L+ +R
Sbjct: 147 --AQQLTVRQVAAGGTHSVVLTREGYVWTWGQ----PWPPGDIKQISVPVRVQGLENVRL 200
Query: 478 VQAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALL 537
+ A G +H A+ E G L+ WG+ + G+LG GD + + P V L
Sbjct: 201 I--AVGAFHNLALKE------------DGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLD 246
Query: 538 EPNFCQVACGHSMTVALSRSGHVYTMGSCVYGQLG---NPKADGKLPTRVEGKLSKSFVE 594
+ +A G + AL+ G VY G +G+LG N K+ LP +V L+ +
Sbjct: 247 DLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVN-LLAGEDII 305
Query: 595 EIACGAYHVAVLTSRTEVYTWGKGANGRLGHG 626
+++CG H LT ++++G+G +GRLG+G
Sbjct: 306 QVSCGGTHSVALTRDGRIFSFGRGDHGRLGYG 337
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 142/328 (43%), Gaps = 50/328 (15%)
Query: 307 PKALESAVVLDVQNIACGGKHAALVSKQGEIFSWG---------EESGGRLGHGVDSDVP 357
P ++S + + A GG H V QG ++WG E S G V D+
Sbjct: 82 PSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIV 141
Query: 358 HPKLIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVH 417
PK + VA G H+ +T G ++TWG + G + Q+S P RV
Sbjct: 142 IPK--RCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQ-PWPPGDI---KQIS--VPVRVQ 193
Query: 418 GLLEGIHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRT 477
GL +V I+ G +H + L+ +G+ +G LG GD + S P ++ L L
Sbjct: 194 GLE---NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTL 250
Query: 478 VQAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGD--KEAKLVPTCVVA 535
V A G WH+ A+ G+++ WG G+ GRLG GD K +K++P V
Sbjct: 251 VDIAAGGWHSTALTN------------EGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNL 298
Query: 536 LLEPNFCQVACGHSMTVALSRSGHVYTMGSCVYGQLGN----------------PKADGK 579
L + QV+CG + +VAL+R G +++ G +G+LG P +G+
Sbjct: 299 LAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIHIPPPEGR 358
Query: 580 LPTRVEGKLSKSFVEEIACGAYHVAVLT 607
E K + +ACG H +
Sbjct: 359 FNHTDEEDDGKWIAKHVACGGRHTLAIV 386
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 142/335 (42%), Gaps = 37/335 (11%)
Query: 337 IFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGT 396
+ +WG G+LG G D + ++++L N+ V G ++ A+ G L+TWG
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWG--- 63
Query: 397 YNY-GLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVL 455
+N G LGH + + + L + + + G WH V + + +G +G
Sbjct: 64 WNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 123
Query: 456 GHGD---------RKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGXXXXXXXXXG 506
G R+ + +P+ +R Q A G H+ + G
Sbjct: 124 GEEPSKDETGRPVRRDIVIPKRCAQQLTVR--QVAAGGTHSVVLTR------------EG 169
Query: 507 KLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTVALSRSGHVYTMGSC 566
++TWG GD + VP V L N +A G +AL G ++ G+
Sbjct: 170 YVWTWGQ----PWPPGDIKQISVPVRVQGL--ENVRLIAVGAFHNLALKEDGTLWAWGNN 223
Query: 567 VYGQLGNPKADGK-LPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGH 625
YGQLG + P V+G + V+ IA G +H LT+ EVY WG+G +GRLG
Sbjct: 224 EYGQLGTGDTQPRSYPIPVQGLDDLTLVD-IAAGGWHSTALTNEGEVYGWGRGEHGRLGF 282
Query: 626 GDTD--DKNSPTLVEALKDKQVKSIACGTNFTAAI 658
GD D K P V L + + ++CG + A+
Sbjct: 283 GDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVAL 317
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 17/192 (8%)
Query: 317 DVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVACG 376
+V+ IA G H + + G +++WG G+LG G +P ++ L + +A G
Sbjct: 197 NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAG 256
Query: 377 EYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWHTA 436
+H+ A+T G++Y WG G + G ++ S P++V+ LL G + +SCG H+
Sbjct: 257 GWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVN-LLAGEDIIQVSCGGTHSV 315
Query: 437 VVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREI----------------ESLKGLRTVQA 480
+T ++F+FG G G LG+G + + P E+ E
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHV 375
Query: 481 ACGVWHTAAVVE 492
ACG HT A+VE
Sbjct: 376 ACGGRHTLAIVE 387
>AT3G26100.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:9538063-9540149 FORWARD
LENGTH=532
Length = 532
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 143/326 (43%), Gaps = 38/326 (11%)
Query: 322 ACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVP--HPKLIESLSSTNIELVACGEYH 379
A G L+S G++++ G+ES G +G P P+L+ SL + + A G Y
Sbjct: 201 AAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYF 260
Query: 380 TCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWHT---A 436
T ++ G +YT+ G N G LGH + + P+ + G LE + V I+ G + A
Sbjct: 261 TAVLSREGKVYTFSWG--NDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALA 318
Query: 437 VVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLK--GLRTVQAACGVWHTAAVVEVM 494
+ + +++ G G G LGHG R PR IE + L+ A G WH A V +
Sbjct: 319 CQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQ-- 376
Query: 495 VGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTVAL 554
G++ TWG G G LGHG++E + VP V L VA G T +
Sbjct: 377 ----------DGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVV 426
Query: 555 SRSGHVYTMGSC---------VYGQLGNPKADGKLPTRV-------EGKLSKSFVEEIAC 598
S G VY+ G + + GN A+ PT V E + S I
Sbjct: 427 SDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYW 486
Query: 599 GAYHVAVLTSRTEVYTWGKGANGRLG 624
A H LT +++ +G G G+LG
Sbjct: 487 NA-HTFALTESGKLFAFGAGDQGQLG 511
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 156/321 (48%), Gaps = 25/321 (7%)
Query: 376 GEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWHT 435
G H+ AVT G++YT+G N G LGHG+ + V L +G+ + + G T
Sbjct: 151 GPGHSVAVTSKGEVYTFG--YNNSGQLGHGHTEDEARIQPVRSL-QGVRIIQAAAGAART 207
Query: 436 AVVTSAVQLFTFGDGTFGVLGHGDR--KSVSLPREIESLKGLRTVQAACGVWHTAAVVEV 493
+++ +++ G +FG +G + K V+ P+ + SLK + VQAA G + TA +
Sbjct: 208 MLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVL--- 264
Query: 494 MVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEP-NFCQVACGHSMTV 552
GK++T+ G+ GRLGH + A + P ++ LE Q+A G+ +
Sbjct: 265 ---------SREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLL 315
Query: 553 ALS---RSGHVYTMGSCVYGQLGN-PKADGKLPTRVEG-KLSKSFVEEIACGAYHVAVLT 607
AL+ VY++G + G+LG+ + D K P +E ++ +A GA+H AV+
Sbjct: 316 ALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVG 375
Query: 608 SRTEVYTWGKGANGRLGHGDTDDKNSPTLVEALKDKQVKSIACG--TNFTAAICLHKWVS 665
V TWG G G LGHG+ + ++ P +VE L + +A G T F + +
Sbjct: 376 QDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSF 435
Query: 666 GVDQSMCSGCRLPFNFKRKRH 686
G +S G F+ + RH
Sbjct: 436 GCGESASLGHHPSFDEQGNRH 456
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 149/309 (48%), Gaps = 42/309 (13%)
Query: 307 PKALESAVVLDVQNIACGGKHAALVSKQGEI--FSWGEESGGRLGHGVDS-DVPHPKLIE 363
P+ + S + V A G A++S++G++ FSWG + GRLGH ++ DV L+
Sbjct: 240 PQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGND--GRLGHQTEAADVEPRPLLG 297
Query: 364 SLSSTNIELVACGEYHTCAVTLSGD---LYTWGDGTYNYGLLGHGNQVSHWAPKRVHGL- 419
L + + +A G + A+ + +Y+ G G G LGHG++ P+ +
Sbjct: 298 PLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLG--GKLGHGSRTDEKYPRVIEQFQ 355
Query: 420 LEGIHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQ 479
+ + ++ G WH AVV ++ T+G G +G LGHG+ + S+P+ +E L ++ V
Sbjct: 356 ILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVH 415
Query: 480 AACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGH-------GDKEAK-LVPT 531
A G + T V + G ++++G G+ LGH G++ A L PT
Sbjct: 416 VATGDYTTFVVSD------------DGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPT 463
Query: 532 CVVALLEPN--FCQVACGHSM-----TVALSRSGHVYTMGSCVYGQLGNPKADGK----L 580
V +L + N Q++ +S+ T AL+ SG ++ G+ GQLG + +
Sbjct: 464 VVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLGTELGKNQKERCV 523
Query: 581 PTRVEGKLS 589
P +V+ LS
Sbjct: 524 PEKVDIDLS 532
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 112/254 (44%), Gaps = 23/254 (9%)
Query: 426 SSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVW 485
S GP H+ VTS +++TFG G LGHG + + + + SL+G+R +QAA G
Sbjct: 146 SQAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAA 205
Query: 486 HTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLV--PTCVVALLEPNFCQ 543
T + + GK++ G G +G + K V P V +L Q
Sbjct: 206 RTMLISD------------DGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQ 253
Query: 544 VACGHSMTVALSRSGHVYTMGSCVYGQLGNPKADGKL-PTRVEGKLSKSFVEEIACGAYH 602
A G+ T LSR G VYT G+LG+ + P + G L V +IA G +
Sbjct: 254 AAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCY 313
Query: 603 VAVLTSR---TEVYTWGKGANGRLGHGDTDDKNSPTLVEALKDKQVKSIACGTNFTAAIC 659
+ L + VY+ G G G+LGHG D+ P ++E Q + + AA
Sbjct: 314 LLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIE-----QFQILNLQPRVVAAGA 368
Query: 660 LHKWVSGVDQSMCS 673
H V G D +C+
Sbjct: 369 WHAAVVGQDGRVCT 382
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 18/173 (10%)
Query: 300 AKMDSLLPKALESAVVLDVQN--IACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVP 357
++ D P+ +E +L++Q +A G HAA+V + G + +WG G LGHG +
Sbjct: 341 SRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 400
Query: 358 HPKLIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGH-------GNQVSH 410
PK++E LS VA G+Y T V+ GD+Y++G G LGH GN+ ++
Sbjct: 401 VPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCG--ESASLGHHPSFDEQGNRHAN 458
Query: 411 -WAPKRVHGLLE----GIHVSSISCGPW--HTAVVTSAVQLFTFGDGTFGVLG 456
+P V L + + +S + W HT +T + +LF FG G G LG
Sbjct: 459 VLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLG 511
>AT3G26100.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:9538458-9540149 FORWARD
LENGTH=432
Length = 432
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 143/328 (43%), Gaps = 42/328 (12%)
Query: 322 ACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVP--HPKLIESLSSTNIELVACGEYH 379
A G L+S G++++ G+ES G +G P P+L+ SL + + A G Y
Sbjct: 101 AAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYF 160
Query: 380 TCAVTLSGDLYT--WGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWHTAV 437
T ++ G +YT WG N G LGH + + P+ + G LE + V I+ G +
Sbjct: 161 TAVLSREGKVYTFSWG----NDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLA 216
Query: 438 VT---SAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLK--GLRTVQAACGVWHTAAVVE 492
+ + + +++ G G G LGHG R PR IE + L+ A G WH A V +
Sbjct: 217 LACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQ 276
Query: 493 VMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTV 552
G++ TWG G G LGHG++E + VP V L VA G T
Sbjct: 277 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTF 324
Query: 553 ALSRSGHVYTMGSC---------VYGQLGNPKADGKLPTRV-------EGKLSKSFVEEI 596
+S G VY+ G + + GN A+ PT V E + S I
Sbjct: 325 VVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSI 384
Query: 597 ACGAYHVAVLTSRTEVYTWGKGANGRLG 624
A H LT +++ +G G G+LG
Sbjct: 385 YWNA-HTFALTESGKLFAFGAGDQGQLG 411
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 156/321 (48%), Gaps = 25/321 (7%)
Query: 376 GEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWHT 435
G H+ AVT G++YT+G N G LGHG+ + V L +G+ + + G T
Sbjct: 51 GPGHSVAVTSKGEVYTFG--YNNSGQLGHGHTEDEARIQPVRSL-QGVRIIQAAAGAART 107
Query: 436 AVVTSAVQLFTFGDGTFGVLGHGDR--KSVSLPREIESLKGLRTVQAACGVWHTAAVVEV 493
+++ +++ G +FG +G + K V+ P+ + SLK + VQAA G + TA +
Sbjct: 108 MLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVL--- 164
Query: 494 MVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEP-NFCQVACGHSMTV 552
GK++T+ G+ GRLGH + A + P ++ LE Q+A G+ +
Sbjct: 165 ---------SREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLL 215
Query: 553 ALS---RSGHVYTMGSCVYGQLGN-PKADGKLPTRVEG-KLSKSFVEEIACGAYHVAVLT 607
AL+ VY++G + G+LG+ + D K P +E ++ +A GA+H AV+
Sbjct: 216 ALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVG 275
Query: 608 SRTEVYTWGKGANGRLGHGDTDDKNSPTLVEALKDKQVKSIACG--TNFTAAICLHKWVS 665
V TWG G G LGHG+ + ++ P +VE L + +A G T F + +
Sbjct: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSF 335
Query: 666 GVDQSMCSGCRLPFNFKRKRH 686
G +S G F+ + RH
Sbjct: 336 GCGESASLGHHPSFDEQGNRH 356
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 149/309 (48%), Gaps = 42/309 (13%)
Query: 307 PKALESAVVLDVQNIACGGKHAALVSKQGEI--FSWGEESGGRLGHGVDS-DVPHPKLIE 363
P+ + S + V A G A++S++G++ FSWG + GRLGH ++ DV L+
Sbjct: 140 PQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGND--GRLGHQTEAADVEPRPLLG 197
Query: 364 SLSSTNIELVACGEYHTCAVTLSGD---LYTWGDGTYNYGLLGHGNQVSHWAPKRVHGL- 419
L + + +A G + A+ + +Y+ G G G LGHG++ P+ +
Sbjct: 198 PLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLG--GKLGHGSRTDEKYPRVIEQFQ 255
Query: 420 LEGIHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQ 479
+ + ++ G WH AVV ++ T+G G +G LGHG+ + S+P+ +E L ++ V
Sbjct: 256 ILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVH 315
Query: 480 AACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGH-------GDKEAK-LVPT 531
A G + T V + G ++++G G+ LGH G++ A L PT
Sbjct: 316 VATGDYTTFVVSD------------DGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPT 363
Query: 532 CVVALLEPN--FCQVACGHSM-----TVALSRSGHVYTMGSCVYGQLGNPKADGK----L 580
V +L + N Q++ +S+ T AL+ SG ++ G+ GQLG + +
Sbjct: 364 VVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLGTELGKNQKERCV 423
Query: 581 PTRVEGKLS 589
P +V+ LS
Sbjct: 424 PEKVDIDLS 432
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 112/254 (44%), Gaps = 23/254 (9%)
Query: 426 SSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVW 485
S GP H+ VTS +++TFG G LGHG + + + + SL+G+R +QAA G
Sbjct: 46 SQAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAA 105
Query: 486 HTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLV--PTCVVALLEPNFCQ 543
T + + GK++ G G +G + K V P V +L Q
Sbjct: 106 RTMLISD------------DGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQ 153
Query: 544 VACGHSMTVALSRSGHVYTMGSCVYGQLGNPKADGKL-PTRVEGKLSKSFVEEIACGAYH 602
A G+ T LSR G VYT G+LG+ + P + G L V +IA G +
Sbjct: 154 AAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCY 213
Query: 603 VAVLTSR---TEVYTWGKGANGRLGHGDTDDKNSPTLVEALKDKQVKSIACGTNFTAAIC 659
+ L + VY+ G G G+LGHG D+ P ++E Q + + AA
Sbjct: 214 LLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIE-----QFQILNLQPRVVAAGA 268
Query: 660 LHKWVSGVDQSMCS 673
H V G D +C+
Sbjct: 269 WHAAVVGQDGRVCT 282
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 18/173 (10%)
Query: 300 AKMDSLLPKALESAVVLDVQN--IACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVP 357
++ D P+ +E +L++Q +A G HAA+V + G + +WG G LGHG +
Sbjct: 241 SRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
Query: 358 HPKLIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGH-------GNQVSH 410
PK++E LS VA G+Y T V+ GD+Y++G G LGH GN+ ++
Sbjct: 301 VPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCG--ESASLGHHPSFDEQGNRHAN 358
Query: 411 -WAPKRVHGLLE----GIHVSSISCGPW--HTAVVTSAVQLFTFGDGTFGVLG 456
+P V L + + +S + W HT +T + +LF FG G G LG
Sbjct: 359 VLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLG 411
>AT3G02300.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:461551-463929 FORWARD
LENGTH=471
Length = 471
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 164/373 (43%), Gaps = 61/373 (16%)
Query: 320 NIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVACGEYH 379
+I+CG +H A V+ G +F+WG G+LG G + HPK ++ L S ++ V+CG +
Sbjct: 65 DISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFC 124
Query: 380 TCAV--------TLSGD-LYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEG-IHVSSIS 429
T A+ TLS L+ WG NQ S+ P+ G + +S
Sbjct: 125 TAAIAEPRENDGTLSTSRLWVWGQ-----------NQGSN-LPRLFSGAFPATTAIRQVS 172
Query: 430 CGPWHTAVVTSAVQLFTFGDGTFGVLGHGDR-KSVSLPREI--------ESLKGLRTVQA 480
CG H ++ L +G G LG G + + PR I E+ + ++ +Q
Sbjct: 173 CGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQL 232
Query: 481 ACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGH-----GDKEAKLVPTCVVA 535
+CG +HTAA+ + G+++TWG G G+LGH GDKE L+P VV
Sbjct: 233 SCGEYHTAALSDA------------GEVYTWGLGSMGQLGHVSLQSGDKE--LIPRRVVG 278
Query: 536 LLEPNFCQVACGHSMTVALSRSGHVYTMGSCVYGQLGNPKADG----------KLPTRVE 585
L + +VACG T ALS G +Y G GQLG G L V
Sbjct: 279 LDGVSMKEVACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVP 338
Query: 586 GKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNSPTLVEALKDKQV 645
+ + V +ACG H V + WG + G+ + + P+ V+ QV
Sbjct: 339 VLVIPTDVRLVACGHSHTLVYMREGRICGWGYNSYGQAANEKSSYAWYPSPVDWCVG-QV 397
Query: 646 KSIACGTNFTAAI 658
+ +A G +A +
Sbjct: 398 RKLAAGGGHSAVL 410
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 84/158 (53%), Gaps = 17/158 (10%)
Query: 304 SLLPKALESA--VVLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSD-VPHPK 360
S LP+ A ++ ++CG H +S++G + +WG G+LG GV + + P+
Sbjct: 152 SNLPRLFSGAFPATTAIRQVSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPR 211
Query: 361 LIESLSS--------TNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVS--- 409
+I + + I ++CGEYHT A++ +G++YTWG G+ G LGH + S
Sbjct: 212 VINAYAKFLDEAPELVKIMQLSCGEYHTAALSDAGEVYTWGLGS--MGQLGHVSLQSGDK 269
Query: 410 HWAPKRVHGLLEGIHVSSISCGPWHTAVVTSAVQLFTF 447
P+RV G L+G+ + ++CG HT ++ L+ +
Sbjct: 270 ELIPRRVVG-LDGVSMKEVACGGVHTCALSLEGALYAW 306
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 12/154 (7%)
Query: 311 ESAVVLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGH----GVDSDVPHPKLIESLS 366
E+ ++ + ++CG H A +S GE+++WG S G+LGH D ++ P+ + L
Sbjct: 222 EAPELVKIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELI-PRRVVGLD 280
Query: 367 STNIELVACGEYHTCAVTLSGDLYTWGDGTY-------NYGLLGHGNQVSHWAPKRVHGL 419
+++ VACG HTCA++L G LY WG G G + S + V L
Sbjct: 281 GVSMKEVACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVL 340
Query: 420 LEGIHVSSISCGPWHTAVVTSAVQLFTFGDGTFG 453
+ V ++CG HT V ++ +G ++G
Sbjct: 341 VIPTDVRLVACGHSHTLVYMREGRICGWGYNSYG 374
>AT3G55580.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:20612766-20615730 FORWARD
LENGTH=488
Length = 488
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 118/260 (45%), Gaps = 40/260 (15%)
Query: 419 LLEGIHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDR-KSVSLPREIESLK---- 473
L G+ + S++ G HT ++ Q++ +G G G LG G R + VS P I ++
Sbjct: 230 LAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSY 289
Query: 474 --------------------GLRTVQAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGD 513
G + ACG H+A + + G L T+G
Sbjct: 290 GKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDT------------GALLTFGW 337
Query: 514 GDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTVALSRSGHVYTMGSCVYGQLGN 573
G G+ G G + +L PTCV +LL +VA G T S G VY G +GQLG
Sbjct: 338 GLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGT 397
Query: 574 PKADGK-LPTRVEG-KLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDK 631
+ LP +E L V+ I+CGA H AV+T V+ WG G+LG GD D+
Sbjct: 398 GCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDR 457
Query: 632 NSPTLVEALKDKQVKSIACG 651
N+P V +KD K+IACG
Sbjct: 458 NAPAEVR-IKDCFPKNIACG 476
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Query: 318 VQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVACGE 377
V+ IACGG+H+A+++ G + ++G G+ G G D P + SL IE VA G
Sbjct: 313 VKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGL 372
Query: 378 YHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGL-LEGIHVSSISCGPWHTA 436
+HT + GD+Y +G +G LG G + PK + LE ++V +ISCG HTA
Sbjct: 373 WHTTCASSDGDVYAFGGN--QFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTA 430
Query: 437 VVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHT 487
V+T ++F +G +G LG GD + P E+ +K ACG WHT
Sbjct: 431 VITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEVR-IKDCFPKNIACGWWHT 480
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 130/313 (41%), Gaps = 53/313 (16%)
Query: 304 SLLPKALESAVVLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDV---PHPK 360
S LP + A + + ++A GG+H +S G+++ WG G+LG G + PHP
Sbjct: 222 SALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPI 281
Query: 361 LIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLL 420
IE + G+ + V +S + G +
Sbjct: 282 PC-------IEPSSYGKATSSGVNMSSVVQC--------------------------GRV 308
Query: 421 EGIHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQA 480
G +V I+CG H+AV+T L TFG G +G G G P + SL G+R +
Sbjct: 309 LGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEV 368
Query: 481 ACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVA--LLE 538
A G+WHT G ++ +G G+LG G +A+ +P + A L
Sbjct: 369 AAGLWHTTCA------------SSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLEN 416
Query: 539 PNFCQVACGHSMTVALSRSGHVYTMGSCVYGQLG-NPKADGKLPTRVEGKLSKSFVEEIA 597
N ++CG T ++ G V+ G YGQLG D P V ++ F + IA
Sbjct: 417 VNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEV--RIKDCFPKNIA 474
Query: 598 CGAYHVAVLTSRT 610
CG +H +L T
Sbjct: 475 CGWWHTLLLGQPT 487
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 39/222 (17%)
Query: 464 SLPREIESLKGLRTVQAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGD 523
+LP + G+R V A G HT A+ ++ G+++ WG G +G+LG G
Sbjct: 223 ALPCLVSLAPGVRIVSVAAGGRHTLALSDI------------GQVWGWGYGGEGQLGLGS 270
Query: 524 KEAKLVPTCVVALLEPN-------------------------FCQVACGHSMTVALSRSG 558
+ + + +EP+ ++ACG + ++ +G
Sbjct: 271 RVRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTG 330
Query: 559 HVYTMGSCVYGQLGNPKADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKG 618
+ T G +YGQ G D +L L +EE+A G +H +S +VY +G
Sbjct: 331 ALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGN 390
Query: 619 ANGRLGHGDTDDKNSPTLVEA--LKDKQVKSIACGTNFTAAI 658
G+LG G + P L+EA L++ VK+I+CG TA I
Sbjct: 391 QFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVI 432
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 75/139 (53%), Gaps = 8/139 (5%)
Query: 303 DSLLPKALESAVVLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLI 362
D L P + S + + ++ +A G H S G+++++G G+LG G D PKL+
Sbjct: 350 DELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLL 409
Query: 363 ES--LSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYN-YGLLGHGNQVSHWAPKRVHGL 419
E+ L + N++ ++CG HT +T G ++ WG +N YG LG G+ + AP V
Sbjct: 410 EAPNLENVNVKTISCGARHTAVITDEGRVFCWG---WNKYGQLGIGDVIDRNAPAEVR-- 464
Query: 420 LEGIHVSSISCGPWHTAVV 438
++ +I+CG WHT ++
Sbjct: 465 IKDCFPKNIACGWWHTLLL 483
>AT1G19880.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr1:6900648-6903818 REVERSE
LENGTH=538
Length = 538
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 159/374 (42%), Gaps = 51/374 (13%)
Query: 307 PKALESAVVLDVQNIA--CGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLIES 364
P L V ++++ +A C H + +G ++WG G+LGHG P ++
Sbjct: 47 PTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSG 106
Query: 365 LSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGL----L 420
LS I A G HT V +S D + G G YG LG G+ + + V +
Sbjct: 107 LSKHKIVKAAAGRNHT--VVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCV 164
Query: 421 EGIHVSSISCGPWHTAVVTS--AVQLFTFGDGTFGVLGHGDRKSVSL------------- 465
V++++CG T ++S + T G +G LGHG ++
Sbjct: 165 VSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQP 224
Query: 466 -PREIESLKGLRTVQAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDK 524
P+ I SL G V+ ACG HT AV G ++TWG G GRLGH ++
Sbjct: 225 RPKAIASLAGETIVKVACGTNHTVAV------------DKNGYVYTWGFGGYGRLGHREQ 272
Query: 525 EAKLVPTCVVA-----LLEPNFCQVACGHSMTVALSRSGHVYTMGSCVYGQLGNPKADGK 579
+ + P + +L PN ++ G + + + G +Y ++G++ N D
Sbjct: 273 KDEWAPRRIDVFQRNNVLPPNAI-LSAGSANSACTAGGGQLY-----MWGKIKNNGDDWM 326
Query: 580 LPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNS--PTLV 637
P + LS + + G+ H + + + +WG G LG+G K+S P V
Sbjct: 327 YPKPMM-DLSGWNLRWMDSGSMH-HFVGADSSCISWGHAQYGELGYGPNGQKSSAAPKKV 384
Query: 638 EALKDKQVKSIACG 651
+ L+ V +ACG
Sbjct: 385 DMLEGMHVMGVACG 398
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 116/269 (43%), Gaps = 50/269 (18%)
Query: 310 LESAVVLDVQNIACGGKHAA-LVSKQG-EIFSWGEESGGRLGHGVDSDV----------- 356
L V +V N+ACG L S +G I + G G+LGHG D++
Sbjct: 161 LPCVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAY 220
Query: 357 ---PHPKLIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAP 413
P PK I SL+ I VACG HT AV +G +YTWG G YG LGH Q WAP
Sbjct: 221 EAQPRPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFG--GYGRLGHREQKDEWAP 278
Query: 414 KRVHGLLEGIHV----SSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREI 469
+R+ + + +V + +S G ++A QL+ +G + +GD P+ +
Sbjct: 279 RRID-VFQRNNVLPPNAILSAGSANSACTAGGGQLYMWGK----IKNNGD--DWMYPKPM 331
Query: 470 ESLKG--LRTVQAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHG--DKE 525
L G LR W + + VG +WG G LG+G ++
Sbjct: 332 MDLSGWNLR--------WMDSGSMHHFVGADSS-------CISWGHAQYGELGYGPNGQK 376
Query: 526 AKLVPTCVVALLEPNFCQVACG--HSMTV 552
+ P V L + VACG HSM +
Sbjct: 377 SSAAPKKVDMLEGMHVMGVACGFCHSMVI 405
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 94/222 (42%), Gaps = 35/222 (15%)
Query: 466 PREIESLKG--LRTVQAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGD 523
P + L G +R V C +H A+ G+ +TWG +KG+LGHGD
Sbjct: 47 PTRLRPLVGVNIRFVATGCASFHCVAL------------DVEGRCYTWGRNEKGQLGHGD 94
Query: 524 KEAKLVPTCVVALLEPNFCQVACGHSMTVALSRSGHVYTMGSCVYGQLGNPKA-DGKLPT 582
+ PT V L + + A G + TV +S G G YGQLG A +G +
Sbjct: 95 MIQRDRPTVVSGLSKHKIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSV 154
Query: 583 RVEGK----LSKSFVEEIACGAYHVAVLTSR--TEVYTWGKGANGRLGHGDTDDKN---- 632
VE + V +ACGA L+S + T G G+LGHG ++ N
Sbjct: 155 EVESTPLPCVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDS 214
Query: 633 ----------SPTLVEALKDKQVKSIACGTNFTAAICLHKWV 664
P + +L + + +ACGTN T A+ + +V
Sbjct: 215 SVRLAYEAQPRPKAIASLAGETIVKVACGTNHTVAVDKNGYV 256
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 307 PKALESAVVLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLIESLS 366
PKA+ S + +ACG H V K G +++WG GRLGH D P+ I+
Sbjct: 226 PKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQ 285
Query: 367 STNI----ELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEG 422
N+ +++ G ++ G LY WG N W + L G
Sbjct: 286 RNNVLPPNAILSAGSANSACTAGGGQLYMWGKIK---------NNGDDWMYPKPMMDLSG 336
Query: 423 IHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHG--DRKSVSLPREIESLKGLRTVQA 480
++ + G H V + ++G +G LG+G +KS + P++++ L+G+ +
Sbjct: 337 WNLRWMDSGSMHH-FVGADSSCISWGHAQYGELGYGPNGQKSSAAPKKVDMLEGMHVMGV 395
Query: 481 ACGVWHTAAVVE 492
ACG H+ +V+
Sbjct: 396 ACGFCHSMVIVD 407
>AT5G60870.3 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:24485788-24487257 REVERSE
LENGTH=276
Length = 276
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 127/281 (45%), Gaps = 34/281 (12%)
Query: 346 GRLGHGVDSDVPHPKLIESLSSTNIELVACGEYHTCAVTLSGDLYTWG----DGTYNYGL 401
G LGH V + P+ ++ I +A HT A+T SG+LY WG DG G
Sbjct: 13 GALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 72
Query: 402 LGHGNQVSHWA-PKRVHGLLEGIHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDR 460
N+ + P +V L + V+S+SCG + T +T QL+ +G + LG GD
Sbjct: 73 GRGPNEGGGLSVPSKVKALT--VPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDN 130
Query: 461 KSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLG 520
P + SL+G+R Q ACG +H+ A+ E GK+ +WG G G+LG
Sbjct: 131 LGGWEPMPVPSLEGVRITQIACGGYHSLALTE------------EGKVLSWGHGGHGQLG 178
Query: 521 HGDKEAKLVPTCVVALLEPNFCQVACGHSMTVALSRSGHVYTMGSCVYGQLGNPKADGKL 580
+ VPT + AL + +A G S + A++ G ++ G+ QLG P L
Sbjct: 179 SSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVP----GL 234
Query: 581 PTRVEGKLSKSFVEE-----------IACGAYHVAVLTSRT 610
P + +F+ E I+ GA H L SR+
Sbjct: 235 PEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLVSRS 275
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 120/247 (48%), Gaps = 24/247 (9%)
Query: 305 LLPKALESAVVLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPH------ 358
L+P+ ++ + + IA G H A +++ GE++ WG E G P+
Sbjct: 24 LVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLS 83
Query: 359 -PKLIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVH 417
P +++L + + V+CG + T A+T G L+ WG + NY LG G+ + W P V
Sbjct: 84 VPSKVKAL-TVPVASVSCGGFFTMALTKEGQLWNWGANS-NY-ELGRGDNLGGWEPMPVP 140
Query: 418 GLLEGIHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRT 477
LEG+ ++ I+CG +H+ +T ++ ++G G G LG ++ +P EIE+L +
Sbjct: 141 S-LEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKI 199
Query: 478 VQAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLG-HGDKEAKLVPTCVVAL 536
V A G +AA+ + G+L+ WG+ +LG G E + P V L
Sbjct: 200 VFIASGGSSSAAITD------------GGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFL 247
Query: 537 LEPNFCQ 543
E + CQ
Sbjct: 248 TEEDECQ 254
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 444 LFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGXXXXXXX 503
L G G FG LGH +PR ++ + A HTAA+ E
Sbjct: 4 LVVRGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITE----------- 52
Query: 504 XXGKLFTWG--DGDKGRLGH-----GDKEAKLVPTCVVALLEPNFCQVACGHSMTVALSR 556
G+L+ WG +GD + VP+ V AL P V+CG T+AL++
Sbjct: 53 -SGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVP-VASVSCGGFFTMALTK 110
Query: 557 SGHVYTMGSCVYGQLGNPKADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWG 616
G ++ G+ +LG G L + +IACG YH LT +V +WG
Sbjct: 111 EGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWG 170
Query: 617 KGANGRLGHGDTDDKNSPTLVEALKDKQVKSIACGTNFTAAI 658
G +G+LG ++ PT +EAL DK++ IA G + +AAI
Sbjct: 171 HGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAI 212
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 126/281 (44%), Gaps = 32/281 (11%)
Query: 395 GTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWHTAVVTSAVQLFTFG------ 448
G +G LGH P+RV + +S+I+ HTA +T + +L+ +G
Sbjct: 8 GYGGFGALGHKVYTRELVPRRVDDSWD-CKISAIATSGTHTAAITESGELYMWGREEGDG 66
Query: 449 -DGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGXXXXXXXXXGK 507
G G + +S+P ++++L + +CG + T A+ + G+
Sbjct: 67 RLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTK------------EGQ 113
Query: 508 LFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTVALSRSGHVYTMGSCV 567
L+ WG LG GD P V +L Q+ACG ++AL+ G V + G
Sbjct: 114 LWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGG 173
Query: 568 YGQLGNPKA-DGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLG-H 625
+GQLG+ + K+PT +E K V IA G A +T E++ WG + +LG
Sbjct: 174 HGQLGSSSLRNQKVPTEIEALADKKIVF-IASGGSSSAAITDGGELWMWGNAKDFQLGVP 232
Query: 626 GDTDDKNSPTLVEALKDK------QVKSIACGTNFTAAICL 660
G + + +P V L ++ +V SI+ G + A+CL
Sbjct: 233 GLPEIQTTPVEVNFLTEEDECQPHKVISISIGASH--ALCL 271
>AT3G03790.1 | Symbols: | ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein |
chr3:963195-967857 FORWARD LENGTH=1078
Length = 1078
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 117/252 (46%), Gaps = 25/252 (9%)
Query: 323 CGGKHAALVSKQ--GEIFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVACGEYHT 380
G A ++ +Q E+FSWG + +LG G P ++SL I+LV+ ++H+
Sbjct: 136 VSGPVAQVIGEQQSSEVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHS 195
Query: 381 CAVTLSGDLYTWGDGTYNYGLLG------HGNQVSHWAPKRVHGLLEGIHVSSISCGPWH 434
A++ G++YTWG G G LG H Q + P++V L V +++ H
Sbjct: 196 VAISTHGEVYTWGFG--RGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHH 253
Query: 435 TAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVM 494
T + T ++T+G G LG+ + + PR++ SLK + V + HTA V +
Sbjct: 254 TVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSLKA-KIVAVSAANKHTAVVSDC- 311
Query: 495 VGXXXXXXXXXGKLFTWGDGDKGRLGHG--DKEAKLVPTCVVALLEPNFCQVACGHSMTV 552
G++FTWG +G+LG+G + + P V L F +A T+
Sbjct: 312 -----------GEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTL 360
Query: 553 ALSRSGHVYTMG 564
L G VYT G
Sbjct: 361 VLRNDGEVYTWG 372
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 117/258 (45%), Gaps = 25/258 (9%)
Query: 368 TNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSS 427
T ++LV+ S ++++WG+G NY L G GNQ P RV L G +
Sbjct: 131 TPVDLVSGPVAQVIGEQQSSEVFSWGNGA-NYQL-GTGNQHVQKVPGRVDSL-HGCFIKL 187
Query: 428 ISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGD------RKSVSLPREIESLKGLRTVQAA 481
+S +H+ +++ +++T+G G G LGH + + +V PR++ S G R V+A
Sbjct: 188 VSAAKFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAV 247
Query: 482 CGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNF 541
H + G ++TWG +G+LG+ + + P V +L +
Sbjct: 248 AAAKHHTVIA-----------TEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSL-KAKI 295
Query: 542 CQVACGHSMTVALSRSGHVYTMGSCVYGQLG---NPKADGKLPTRVEGKLSKSFVEEIAC 598
V+ + T +S G V+T G GQLG + A P V+ K F IA
Sbjct: 296 VAVSAANKHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTA-IAS 354
Query: 599 GAYHVAVLTSRTEVYTWG 616
YH VL + EVYTWG
Sbjct: 355 SKYHTLVLRNDGEVYTWG 372
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 137/318 (43%), Gaps = 40/318 (12%)
Query: 318 VQNIACGGKHAALVSKQGEIFSWGEESGGRLGH-------GVDSDVPHPKLIESLSSTNI 370
++ ++ H+ +S GE+++WG GGRLGH G + + ++I L S +
Sbjct: 185 IKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRV 244
Query: 371 ELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISC 430
+ VA ++HT T GD+YTW G+ G LG+ + + P++V L + ++S
Sbjct: 245 KAVAAAKHHTVIATEGGDVYTW--GSNREGQLGYTSVDTQATPRKVTSL--KAKIVAVSA 300
Query: 431 GPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVS--LPREIESLKGLRTVQAACGVWHTA 488
HTAVV+ ++FT+G G LG+G S S PR ++ LKG A +HT
Sbjct: 301 ANKHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTL 360
Query: 489 AVVEVMVGXXXXXXXXXGKLFTWG----DGDKGRLGHGDKEAKLVPTCVVALLEPNFCQV 544
+ G+++TWG + + K+A +
Sbjct: 361 VL------------RNDGEVYTWGHRLVTPRRVIISRNLKKAGNTLLNFHRRRPLRLTAI 408
Query: 545 ACGHSMTVALSRSGHVYTMGSCVYGQLGNPKADGKLPTRVEGKLSKSFVEEIACGAYHVA 604
A G ++AL+ G + S +D L + L V I+ G Y +
Sbjct: 409 AAGMVHSLALAEDGAFFYWVS----------SDSNLRCQQLHSLHGKTVVSISAGKYWAS 458
Query: 605 VLTSRTEVYTWGKGANGR 622
+TS EVY W G NG+
Sbjct: 459 AVTSTGEVYMW-DGKNGK 475
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 106/225 (47%), Gaps = 22/225 (9%)
Query: 443 QLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGXXXXXX 502
++F++G+G LG G++ +P ++SL G + +H+ A+
Sbjct: 151 EVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAI------------ 198
Query: 503 XXXGKLFTWGDGDKGRLGHGD------KEAKLVPTCVVALLEPNFCQ-VACGHSMTVALS 555
G+++TWG G GRLGH + + A + P V++ L + VA TV +
Sbjct: 199 STHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIAT 258
Query: 556 RSGHVYTMGSCVYGQLGNPKADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTW 615
G VYT GS GQLG D + R L K+ + ++ H AV++ EV+TW
Sbjct: 259 EGGDVYTWGSNREGQLGYTSVDTQATPRKVTSL-KAKIVAVSAANKHTAVVSDCGEVFTW 317
Query: 616 GKGANGRLGHGDTDDKN--SPTLVEALKDKQVKSIACGTNFTAAI 658
G G+LG+G ++ + SP LV+ LK K +IA T +
Sbjct: 318 GCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVL 362
>AT3G03790.2 | Symbols: | ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein |
chr3:963195-967857 FORWARD LENGTH=1081
Length = 1081
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 23/237 (9%)
Query: 336 EIFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDG 395
E+FSWG + +LG G P ++SL I+LV+ ++H+ A++ G++YTWG G
Sbjct: 154 EVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFG 213
Query: 396 TYNYGLLG------HGNQVSHWAPKRVHGLLEGIHVSSISCGPWHTAVVTSAVQLFTFGD 449
G LG H Q + P++V L V +++ HT + T ++T+G
Sbjct: 214 --RGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGS 271
Query: 450 GTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGXXXXXXXXXGKLF 509
G LG+ + + PR++ SLK + V + HTA V + G++F
Sbjct: 272 NREGQLGYTSVDTQATPRKVTSLKA-KIVAVSAANKHTAVVSDC------------GEVF 318
Query: 510 TWGDGDKGRLGHG--DKEAKLVPTCVVALLEPNFCQVACGHSMTVALSRSGHVYTMG 564
TWG +G+LG+G + + P V L F +A T+ L G VYT G
Sbjct: 319 TWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWG 375
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 137/318 (43%), Gaps = 40/318 (12%)
Query: 318 VQNIACGGKHAALVSKQGEIFSWGEESGGRLGH-------GVDSDVPHPKLIESLSSTNI 370
++ ++ H+ +S GE+++WG GGRLGH G + + ++I L S +
Sbjct: 188 IKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRV 247
Query: 371 ELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISC 430
+ VA ++HT T GD+YTW G+ G LG+ + + P++V L + ++S
Sbjct: 248 KAVAAAKHHTVIATEGGDVYTW--GSNREGQLGYTSVDTQATPRKVTSL--KAKIVAVSA 303
Query: 431 GPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVS--LPREIESLKGLRTVQAACGVWHTA 488
HTAVV+ ++FT+G G LG+G S S PR ++ LKG A +HT
Sbjct: 304 ANKHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTL 363
Query: 489 AVVEVMVGXXXXXXXXXGKLFTWG----DGDKGRLGHGDKEAKLVPTCVVALLEPNFCQV 544
+ G+++TWG + + K+A +
Sbjct: 364 VL------------RNDGEVYTWGHRLVTPRRVIISRNLKKAGNTLLNFHRRRPLRLTAI 411
Query: 545 ACGHSMTVALSRSGHVYTMGSCVYGQLGNPKADGKLPTRVEGKLSKSFVEEIACGAYHVA 604
A G ++AL+ G + S +D L + L V I+ G Y +
Sbjct: 412 AAGMVHSLALAEDGAFFYWVS----------SDSNLRCQQLHSLHGKTVVSISAGKYWAS 461
Query: 605 VLTSRTEVYTWGKGANGR 622
+TS EVY W G NG+
Sbjct: 462 AVTSTGEVYMW-DGKNGK 478
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 114/251 (45%), Gaps = 28/251 (11%)
Query: 375 CGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWH 434
GE + T ++++WG+G NY L G GNQ P RV L G + +S +H
Sbjct: 144 IGEQQSSVAT---EVFSWGNGA-NYQL-GTGNQHVQKVPGRVDSL-HGCFIKLVSAAKFH 197
Query: 435 TAVVTSAVQLFTFGDGTFGVLGHGD------RKSVSLPREIESLKGLRTVQAACGVWHTA 488
+ +++ +++T+G G G LGH + + +V PR++ S G R V+A H
Sbjct: 198 SVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHT 257
Query: 489 AVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGH 548
+ G ++TWG +G+LG+ + + P V +L + V+ +
Sbjct: 258 VIA-----------TEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSL-KAKIVAVSAAN 305
Query: 549 SMTVALSRSGHVYTMGSCVYGQLG---NPKADGKLPTRVEGKLSKSFVEEIACGAYHVAV 605
T +S G V+T G GQLG + A P V+ K F IA YH V
Sbjct: 306 KHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTA-IASSKYHTLV 364
Query: 606 LTSRTEVYTWG 616
L + EVYTWG
Sbjct: 365 LRNDGEVYTWG 375
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 107/227 (47%), Gaps = 22/227 (9%)
Query: 441 AVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGXXXX 500
A ++F++G+G LG G++ +P ++SL G + +H+ A+
Sbjct: 152 ATEVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAI---------- 201
Query: 501 XXXXXGKLFTWGDGDKGRLGHGD------KEAKLVPTCVVALLEPNFCQ-VACGHSMTVA 553
G+++TWG G GRLGH + + A + P V++ L + VA TV
Sbjct: 202 --STHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVI 259
Query: 554 LSRSGHVYTMGSCVYGQLGNPKADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVY 613
+ G VYT GS GQLG D + R L K+ + ++ H AV++ EV+
Sbjct: 260 ATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSL-KAKIVAVSAANKHTAVVSDCGEVF 318
Query: 614 TWGKGANGRLGHGDTDDKN--SPTLVEALKDKQVKSIACGTNFTAAI 658
TWG G+LG+G ++ + SP LV+ LK K +IA T +
Sbjct: 319 TWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVL 365
>AT3G03790.3 | Symbols: | ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein |
chr3:963195-968011 FORWARD LENGTH=1099
Length = 1099
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 23/237 (9%)
Query: 336 EIFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDG 395
E+FSWG + +LG G P ++SL I+LV+ ++H+ A++ G++YTWG G
Sbjct: 154 EVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFG 213
Query: 396 TYNYGLLG------HGNQVSHWAPKRVHGLLEGIHVSSISCGPWHTAVVTSAVQLFTFGD 449
G LG H Q + P++V L V +++ HT + T ++T+G
Sbjct: 214 --RGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGS 271
Query: 450 GTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGXXXXXXXXXGKLF 509
G LG+ + + PR++ SLK + V + HTA V + G++F
Sbjct: 272 NREGQLGYTSVDTQATPRKVTSLKA-KIVAVSAANKHTAVVSDC------------GEVF 318
Query: 510 TWGDGDKGRLGHG--DKEAKLVPTCVVALLEPNFCQVACGHSMTVALSRSGHVYTMG 564
TWG +G+LG+G + + P V L F +A T+ L G VYT G
Sbjct: 319 TWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWG 375
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 137/318 (43%), Gaps = 40/318 (12%)
Query: 318 VQNIACGGKHAALVSKQGEIFSWGEESGGRLGH-------GVDSDVPHPKLIESLSSTNI 370
++ ++ H+ +S GE+++WG GGRLGH G + + ++I L S +
Sbjct: 188 IKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRV 247
Query: 371 ELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISC 430
+ VA ++HT T GD+YTW G+ G LG+ + + P++V L + ++S
Sbjct: 248 KAVAAAKHHTVIATEGGDVYTW--GSNREGQLGYTSVDTQATPRKVTSL--KAKIVAVSA 303
Query: 431 GPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVS--LPREIESLKGLRTVQAACGVWHTA 488
HTAVV+ ++FT+G G LG+G S S PR ++ LKG A +HT
Sbjct: 304 ANKHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTL 363
Query: 489 AVVEVMVGXXXXXXXXXGKLFTWG----DGDKGRLGHGDKEAKLVPTCVVALLEPNFCQV 544
+ G+++TWG + + K+A +
Sbjct: 364 VL------------RNDGEVYTWGHRLVTPRRVIISRNLKKAGNTLLNFHRRRPLRLTAI 411
Query: 545 ACGHSMTVALSRSGHVYTMGSCVYGQLGNPKADGKLPTRVEGKLSKSFVEEIACGAYHVA 604
A G ++AL+ G + S +D L + L V I+ G Y +
Sbjct: 412 AAGMVHSLALAEDGAFFYWVS----------SDSNLRCQQLHSLHGKTVVSISAGKYWAS 461
Query: 605 VLTSRTEVYTWGKGANGR 622
+TS EVY W G NG+
Sbjct: 462 AVTSTGEVYMW-DGKNGK 478
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 114/251 (45%), Gaps = 28/251 (11%)
Query: 375 CGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLLEGIHVSSISCGPWH 434
GE + T ++++WG+G NY L G GNQ P RV L G + +S +H
Sbjct: 144 IGEQQSSVAT---EVFSWGNGA-NYQL-GTGNQHVQKVPGRVDSL-HGCFIKLVSAAKFH 197
Query: 435 TAVVTSAVQLFTFGDGTFGVLGHGD------RKSVSLPREIESLKGLRTVQAACGVWHTA 488
+ +++ +++T+G G G LGH + + +V PR++ S G R V+A H
Sbjct: 198 SVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHT 257
Query: 489 AVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGH 548
+ G ++TWG +G+LG+ + + P V +L + V+ +
Sbjct: 258 VIA-----------TEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSL-KAKIVAVSAAN 305
Query: 549 SMTVALSRSGHVYTMGSCVYGQLG---NPKADGKLPTRVEGKLSKSFVEEIACGAYHVAV 605
T +S G V+T G GQLG + A P V+ K F IA YH V
Sbjct: 306 KHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTA-IASSKYHTLV 364
Query: 606 LTSRTEVYTWG 616
L + EVYTWG
Sbjct: 365 LRNDGEVYTWG 375
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 107/227 (47%), Gaps = 22/227 (9%)
Query: 441 AVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGXXXX 500
A ++F++G+G LG G++ +P ++SL G + +H+ A+
Sbjct: 152 ATEVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAI---------- 201
Query: 501 XXXXXGKLFTWGDGDKGRLGHGD------KEAKLVPTCVVALLEPNFCQ-VACGHSMTVA 553
G+++TWG G GRLGH + + A + P V++ L + VA TV
Sbjct: 202 --STHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVI 259
Query: 554 LSRSGHVYTMGSCVYGQLGNPKADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVY 613
+ G VYT GS GQLG D + R L K+ + ++ H AV++ EV+
Sbjct: 260 ATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSL-KAKIVAVSAANKHTAVVSDCGEVF 318
Query: 614 TWGKGANGRLGHGDTDDKN--SPTLVEALKDKQVKSIACGTNFTAAI 658
TWG G+LG+G ++ + SP LV+ LK K +IA T +
Sbjct: 319 TWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVL 365
>AT3G53830.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:19940814-19943592 FORWARD
LENGTH=472
Length = 472
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 160/375 (42%), Gaps = 62/375 (16%)
Query: 318 VQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVACGE 377
V + G H A+V++ GE F+WG + + S P K +S SS ++ + G
Sbjct: 107 VVQASSGWAHCAVVTETGEAFTWGWK------ECIPSKDPVGKQ-QSGSSEQGDIASQGS 159
Query: 378 YHTCAVTLSGDLYTWGD--------GTYNYGLLGH--GNQVSHWAPKRVHGLLEGIHVSS 427
TL + G+ T GH G P V L G+ ++S
Sbjct: 160 NAASGTTLQNENQKVGEESVKRRRVSTAKDETEGHTSGGDFFATTPSLVSVGL-GVRITS 218
Query: 428 ISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDR-KSVSLPREIESLK------------- 473
++ G HT ++ Q++ +G G G LG G R K VS P I L+
Sbjct: 219 VATGGRHTLALSDLGQIWGWGYGGEGQLGLGSRIKMVSSPHLIPCLESIGSGKERSFILH 278
Query: 474 --GLRTVQA-------------ACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGR 518
G T A +CG H+AA+ + G L T+G G G+
Sbjct: 279 QGGTTTTSAQASREPGQYIKAISCGGRHSAAITDA------------GGLITFGWGLYGQ 326
Query: 519 LGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTVALSRSGHVYTMGSCVYGQLGNPKADG 578
GHG+ +L P V + VA G T+ +S G VY G +GQLG
Sbjct: 327 CGHGNTNDQLRPMAVSEVKSVRMESVAAGLWHTICISSDGKVYAFGGNQFGQLGTGTDHA 386
Query: 579 K-LPTRVEGK-LSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNSPTL 636
+ LP ++G+ L + ++CGA H AVL ++ WG G+LG GDT+D+N PT
Sbjct: 387 EILPRLLDGQNLEGKHAKAVSCGARHSAVLAEDGQLLCWGWNKYGQLGLGDTNDRNIPTQ 446
Query: 637 VEALKDKQVKSIACG 651
V+ L +++ +ACG
Sbjct: 447 VQ-LDGCRLRKVACG 460
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 134/320 (41%), Gaps = 49/320 (15%)
Query: 291 AHQVGSCFDAKMDSLLPKALESAVVLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGH 350
H G F A SL+ L + + ++A GG+H +S G+I+ WG G+LG
Sbjct: 193 GHTSGGDFFATTPSLVSVGLG----VRITSVATGGRHTLALSDLGQIWGWGYGGEGQLGL 248
Query: 351 GVDSD-VPHPKLIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVS 409
G V P LI L S G G +L G +
Sbjct: 249 GSRIKMVSSPHLIPCLESI------------------------GSGKERSFILHQGGTTT 284
Query: 410 HWAPKRVHGLLEGIHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREI 469
A G ++ +ISCG H+A +T A L TFG G +G GHG+ P +
Sbjct: 285 TSAQASRE---PGQYIKAISCGGRHSAAITDAGGLITFGWGLYGQCGHGNTNDQLRPMAV 341
Query: 470 ESLKGLRTVQAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLV 529
+K +R A G+WHT + GK++ +G G+LG G A+++
Sbjct: 342 SEVKSVRMESVAAGLWHTICI------------SSDGKVYAFGGNQFGQLGTGTDHAEIL 389
Query: 530 PTCVVAL-LEPNFCQ-VACGHSMTVALSRSGHVYTMGSCVYGQLG-NPKADGKLPTRVEG 586
P + LE + V+CG + L+ G + G YGQLG D +PT+V+
Sbjct: 390 PRLLDGQNLEGKHAKAVSCGARHSAVLAEDGQLLCWGWNKYGQLGLGDTNDRNIPTQVQ- 448
Query: 587 KLSKSFVEEIACGAYHVAVL 606
L + ++ACG +H +L
Sbjct: 449 -LDGCRLRKVACGWWHTLLL 467
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 148/388 (38%), Gaps = 72/388 (18%)
Query: 317 DVQNIACGGKHAALVSKQGEIFSWG---EESGGRLGHGVDSDVPHPKLIESLSSTNIELV 373
DV CG A +S++G++ +WG +E + G + P P + + +
Sbjct: 55 DVCGGGCG--FAMAISEKGKLITWGSTDDEGQSYVASGKHGETPEPFPLPT--EAPVVQA 110
Query: 374 ACGEYHTCAVTLSGDLYTWG----------DGTYNYGLLGHGNQVSHWAPKRVHGLL--E 421
+ G H VT +G+ +TWG G G G+ S + L E
Sbjct: 111 SSGWAHCAVVTETGEAFTWGWKECIPSKDPVGKQQSGSSEQGDIASQGSNAASGTTLQNE 170
Query: 422 GIHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAA 481
V S + + T G F + P + G+R A
Sbjct: 171 NQKVGEESVKRRRVSTAKDETEGHTSGGDFF----------ATTPSLVSVGLGVRITSVA 220
Query: 482 CGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDK-----EAKLVP------ 530
G HT A+ ++ G+++ WG G +G+LG G + L+P
Sbjct: 221 TGGRHTLALSDL------------GQIWGWGYGGEGQLGLGSRIKMVSSPHLIPCLESIG 268
Query: 531 ----------------TCVVALLEPN--FCQVACGHSMTVALSRSGHVYTMGSCVYGQLG 572
T A EP ++CG + A++ +G + T G +YGQ G
Sbjct: 269 SGKERSFILHQGGTTTTSAQASREPGQYIKAISCGGRHSAAITDAGGLITFGWGLYGQCG 328
Query: 573 NPKADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDKN 632
+ + +L ++ +E +A G +H ++S +VY +G G+LG G +
Sbjct: 329 HGNTNDQLRPMAVSEVKSVRMESVAAGLWHTICISSDGKVYAFGGNQFGQLGTGTDHAEI 388
Query: 633 SPTLVEA--LKDKQVKSIACGTNFTAAI 658
P L++ L+ K K+++CG +A +
Sbjct: 389 LPRLLDGQNLEGKHAKAVSCGARHSAVL 416
>AT3G02510.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:522524-524536 REVERSE
LENGTH=310
Length = 310
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 139/326 (42%), Gaps = 39/326 (11%)
Query: 337 IFSWGEESGGRLGHGVDSDVPHPKLIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGT 396
I +WG G+LG G + + ++E+L ++ V G ++ A+ G ++TWG
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWG--- 63
Query: 397 YNY-GLLGHGNQV-SHWAPKRVHGLLEGIHVSSISCGPWHTAVVTSAVQLFTFGDGTFGV 454
+N G LGH + + P RV L + ++ + G WH V + + +G +G
Sbjct: 64 WNQRGTLGHQPETKTENIPSRVKALAN-VKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 122
Query: 455 ---------LGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGXXXXXXXXX 505
+G R+ + +P+ +R Q A G H+ +
Sbjct: 123 CGEEPLKDEMGRPVRRDIVIPKRCAPKLTVR--QVAAGGTHSVVLTR------------E 168
Query: 506 GKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTVALSRSGHVYTMGS 565
G ++TWG GD + VP V L N +A G +AL G + G+
Sbjct: 169 GHVWTWGQ----PWPPGDIKQISVPVRVQGL--ENVRLIAVGAFHNLALEEDGRLLAWGN 222
Query: 566 CVYGQLGNPKAD-GKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLG 624
YGQLG P V+G + V+ IA G +H LT + EVY WG+G +GRLG
Sbjct: 223 NEYGQLGTGDTQPTSHPVPVQGLDDLTLVD-IAAGGWHSTALTDKGEVYGWGRGEHGRLG 281
Query: 625 HGDTD--DKNSPTLVEALKDKQVKSI 648
GD D K P V L ++ + +
Sbjct: 282 LGDNDKSSKMVPQKVNLLAEEDIIQV 307
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 113/250 (45%), Gaps = 34/250 (13%)
Query: 306 LPKALESAVVLDVQNIACGGKHAALVSKQGEIFSWGEESGGR---------LGHGVDSDV 356
+P +++ + + A GG H V QG ++WG G+ +G V D+
Sbjct: 81 IPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDI 140
Query: 357 PHPKLIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRV 416
PK + VA G H+ +T G ++TWG + G + Q+S P RV
Sbjct: 141 VIPK--RCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ-PWPPGDI---KQIS--VPVRV 192
Query: 417 HGLLEGIHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLR 476
GL +V I+ G +H + +L +G+ +G LG GD + S P ++ L L
Sbjct: 193 QGLE---NVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLT 249
Query: 477 TVQAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHG--DKEAKLVPTCVV 534
V A G WH+ A+ + G+++ WG G+ GRLG G DK +K+VP V
Sbjct: 250 LVDIAAGGWHSTALTD------------KGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVN 297
Query: 535 ALLEPNFCQV 544
L E + QV
Sbjct: 298 LLAEEDIIQV 307
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 125/282 (44%), Gaps = 37/282 (13%)
Query: 389 LYTWGDGTYNYGLLGHG-NQVSHWAPKRVHGLLEGIHVSSISCGPWHTAVVTSAVQLFTF 447
+ WG G G LG G N+ WA V LE V S+ G ++ + +FT+
Sbjct: 7 IIAWGSG--EDGQLGIGTNEEKEWAC--VVEALEPYSVRSVVSGSRNSLAICDDGTMFTW 62
Query: 448 GDGTFGVLGHG-DRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGXXXXXXXXXG 506
G G LGH + K+ ++P +++L ++ QAA G WH AV + G
Sbjct: 63 GWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDD------------QG 110
Query: 507 KLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFC-------QVACGHSMTVALSRSGH 559
+ + WG + G+ G + ++ ++ P C QVA G + +V L+R GH
Sbjct: 111 RAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGH 170
Query: 560 VYTMGSCVYGQLGNPKADGK---LPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWG 616
V+T G P D K +P RV+G + V IA GA+H L + WG
Sbjct: 171 VWTWGQPW------PPGDIKQISVPVRVQGLEN---VRLIAVGAFHNLALEEDGRLLAWG 221
Query: 617 KGANGRLGHGDTDDKNSPTLVEALKDKQVKSIACGTNFTAAI 658
G+LG GDT + P V+ L D + IA G + A+
Sbjct: 222 NNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTAL 263
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 124/278 (44%), Gaps = 32/278 (11%)
Query: 318 VQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPH-PKLIESLSSTNIELVACG 376
V+++ G +++ + G +F+WG G LGH ++ + P +++L++ I A G
Sbjct: 40 VRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIG 99
Query: 377 EYHTCAVTLSGDLYTWGDGTYNY-------GLLGHGNQVSHWAPKRVHGLLEGIHVSSIS 429
+H AV G Y WG Y +G + PKR L V ++
Sbjct: 100 GWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLT---VRQVA 156
Query: 430 CGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAA 489
G H+ V+T ++T+G GD K +S+P ++ L+ +R + A G +H A
Sbjct: 157 AGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLENVRLI--AVGAFHNLA 210
Query: 490 VVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHS 549
+ E G+L WG+ + G+LG GD + P V L + +A G
Sbjct: 211 LEE------------DGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGW 258
Query: 550 MTVALSRSGHVYTMGSCVYGQLG---NPKADGKLPTRV 584
+ AL+ G VY G +G+LG N K+ +P +V
Sbjct: 259 HSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKV 296
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 13/181 (7%)
Query: 301 KMDSLLPKALESAVVLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPK 360
+ D ++PK A L V+ +A GG H+ +++++G +++WG+ G + P
Sbjct: 137 RRDIVIPK--RCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPV 190
Query: 361 LIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWAPKRVHGLL 420
++ L N+ L+A G +H A+ G L WG+ YG LG G+ P V G L
Sbjct: 191 RVQGLE--NVRLIAVGAFHNLALEEDGRLLAWGNN--EYGQLGTGDTQPTSHPVPVQG-L 245
Query: 421 EGIHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHG--DRKSVSLPREIESLKGLRTV 478
+ + + I+ G WH+ +T +++ +G G G LG G D+ S +P+++ L +
Sbjct: 246 DDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDII 305
Query: 479 Q 479
Q
Sbjct: 306 Q 306
>AT5G11580.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:3718913-3721125 FORWARD
LENGTH=553
Length = 553
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 154/373 (41%), Gaps = 47/373 (12%)
Query: 318 VQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVPHPKLIESLSSTN-----IEL 372
+ ++A G H ++ G ++SWG GRLG G +SD P L+E + I
Sbjct: 18 IISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVG 77
Query: 373 VACGEYHTCAVTLSGDLYTWGDGTYN-YGLLGHGNQVSHWAPKRVHGLLE---------- 421
VA G YH+ AV+ G ++ WG YN YG LG + S AP + L E
Sbjct: 78 VAAGAYHSLAVSDDGSVWCWG---YNIYGQLGFDGENS-LAPCLIKNLFERETSSSSLND 133
Query: 422 -------GIHVSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDR---KSVSLPREIES 471
+ V ++ G + + + L+ +G+ R S+ +P I
Sbjct: 134 SGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPIPFPILD 193
Query: 472 LKGLRTVQAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPT 531
G ++ ACG H A+V L++WG+ G+LG GD E++ P
Sbjct: 194 FHGRTVLKVACGDEHVVALVGPG-DIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQ 252
Query: 532 CVVALLEPN---FCQVACGHSMTVALSRSGHV-------YTMGSCVYGQLGN-PKADGKL 580
V + + +ACG T L+ +T G GQLG+ L
Sbjct: 253 TVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSL 312
Query: 581 PTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNSPTLVEAL 640
P V +++ + CG +H +V++S V++WG G G D N T VEA
Sbjct: 313 PEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWGM----ERGLGLCPDVNF-TEVEAG 367
Query: 641 KDKQVKSIACGTN 653
D + I+ G++
Sbjct: 368 DDSVPRKISGGSS 380
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 162/392 (41%), Gaps = 73/392 (18%)
Query: 303 DSLLPKALE-----SAVVLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGVDSDVP 357
D L+P +E + + +A G H+ VS G ++ WG G+LG ++ +
Sbjct: 55 DELVPVLVEFPNQAEGDRIRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLA 114
Query: 358 HPKLIESL------------------SSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNY 399
P LI++L S + V G + A+ G L+ WG+
Sbjct: 115 -PCLIKNLFERETSSSSLNDSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGNVP--- 170
Query: 400 GLLGHGNQVSHWAPKRVHGLL---------EGIHVSSISCGPWHTAVVT----------- 439
Q S P+ + G V ++CG H +
Sbjct: 171 ------PQDSEPDPRLSFTSIPIPFPILDFHGRTVLKVACGDEHVVALVGPGDIHKDNSY 224
Query: 440 SAVQLFTFGDGTFGVLGHGDRKSVSLPREIESLK---GLRTVQAACGVWHTAAVVEVMVG 496
L+++G+ G LG GD +S + P+ +E+ GL ACG HTA ++
Sbjct: 225 DVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTA-----LLT 279
Query: 497 XXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNF-CQVACGHSMTVALS 555
+T+G G+ G+LGH ++ +P V L E + V CG T +S
Sbjct: 280 YRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVS 339
Query: 556 RSGHVYT------MGSCVYGQLGNPKA-DGKLPTRVEGKLSKSFVE--EIACGAYH-VAV 605
G+V++ +G C +A D +P ++ G S+ F + +++CGA H V V
Sbjct: 340 SEGYVWSWGMERGLGLCPDVNFTEVEAGDDSVPRKISGGSSR-FRDPVQVSCGAAHTVLV 398
Query: 606 LTSRTEVYTWGKGANGRLGHGDTDDKNSPTLV 637
+ ++++WG+G NG LG G+ D PTLV
Sbjct: 399 VDGGYKLWSWGRGRNGVLGTGNVSDCYVPTLV 430
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 108/286 (37%), Gaps = 69/286 (24%)
Query: 425 VSSISCGPWHTAVVTSAVQLFTFGDGTFGVLGHGDRKS------VSLPREIESLKGLRTV 478
+ S++ G HT +T ++++G G FG LG G V P + E + +R V
Sbjct: 18 IISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDR-IRIV 76
Query: 479 QAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLE 538
A G +H+ AV + G ++ WG G+LG D E L P + L E
Sbjct: 77 GVAAGAYHSLAVSD------------DGSVWCWGYNIYGQLGF-DGENSLAPCLIKNLFE 123
Query: 539 PN------------------FCQVACGHSMTVALSRSGHVYTMGSCVYGQLGNPKADGKL 580
C V G M++A+ G ++ G+ P D +
Sbjct: 124 RETSSSSLNDSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGNV-------PPQDSEP 176
Query: 581 PTRVEG----------KLSKSFVEEIACGAYHVAVLTSRTEV-----------YTWGKGA 619
R+ V ++ACG HV L ++ Y+WG
Sbjct: 177 DPRLSFTSIPIPFPILDFHGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNH 236
Query: 620 NGRLGHGDTDDKNSPTLVEALKDKQ---VKSIACGTNFTAAICLHK 662
+G+LG GD + + P VE K V IACG + TA + K
Sbjct: 237 HGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRK 282
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 11/126 (8%)
Query: 530 PTCVVAL-LEPNFCQVACGHSMTVALSRSGHVYTMGSCVYGQLGNPKADGKL-------P 581
PT +++ L +A G + T+AL+ G VY+ G ++G+LG K +L P
Sbjct: 6 PTLLISEDLSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFP 65
Query: 582 TRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNSPTLVEALK 641
+ EG + + +A GAYH ++ V+ WG G+LG D ++ +P L++ L
Sbjct: 66 NQAEGDRIR--IVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGF-DGENSLAPCLIKNLF 122
Query: 642 DKQVKS 647
+++ S
Sbjct: 123 ERETSS 128
>AT5G48330.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:19585989-19587729 FORWARD
LENGTH=454
Length = 454
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 160/383 (41%), Gaps = 43/383 (11%)
Query: 302 MDSLLPKALESAVVLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGV-DS--DVPH 358
MD+ P + S + D+ +I+ G H+ V+ GEI++WG G+LG V DS
Sbjct: 69 MDAYEPTVV-SNLPSDISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSRDSRSE 127
Query: 359 PKLIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQ-VSHWAPKRVH 417
PK +E L + N++ + A+ G L+ W G G LG GN + P RV
Sbjct: 128 PKRVEGLENVNVQAAFASGVVSAAIGDDGSLWVW--GRSKRGQLGLGNGIIEARVPSRVE 185
Query: 418 GLLEGIHVSSISCGPWHTAVVTSAVQLFTFG---DGTFGVLGHGDRKSVSLPREIESLKG 474
L HV +S G H +T ++F +G DG G +G S+ S+KG
Sbjct: 186 N-LAAEHVVKVSLGWGHALALTVDGKVFGWGYVADGRVGNVGLPLEASLLDSITDGSMKG 244
Query: 475 -------------LRTVQAA------------CGVWHTA--AVVEVMVGXXXXXXX-XXG 506
+ V+A C V T V ++ G G
Sbjct: 245 HHAAGDLNLEAAEKKVVEAMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLILCHDG 304
Query: 507 KLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTVALSRSGHVYTMGSC 566
L + G G+LG ++ + P + P GHS+ + ++ + G
Sbjct: 305 TLLSAGSNIYGQLGRSKQDLGMKPVDITE--SPISIAAGLGHSLAICNRGERNILSWGWN 362
Query: 567 VYGQLGNPKADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHG 626
QLG K + LP VEG +S ++ G H +T + E + WG G NGRLG G
Sbjct: 363 RSRQLGRGKPE-NLPREVEGFDGESPA-SVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLG 420
Query: 627 DTDDKNSPTLVEALKDKQVKSIA 649
+ D+ P L+E ++ ++++A
Sbjct: 421 SSSDEPEPMLLEDVEGCVLQAVA 443
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 125/284 (44%), Gaps = 41/284 (14%)
Query: 389 LYTWGDGTYNYGLLGH------GNQVSHWAPKRVHGLLEGIHVSSISCGPWHTAVVTSAV 442
+ ++GDG N G LG G + + P V L I SSIS G +H+ VTS+
Sbjct: 46 VMSFGDG--NLGALGLSSSSIPGMGMDAYEPTVVSNLPSDI--SSISAGHYHSLAVTSSG 101
Query: 443 QLFTFGDGTFGVLGH---GDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGXXX 499
+++ +G G LG R S S P+ +E L+ + VQAA + VV +G
Sbjct: 102 EIWAWGRNDEGQLGRIVIDSRDSRSEPKRVEGLENV-NVQAA----FASGVVSAAIG--- 153
Query: 500 XXXXXXGKLFTWGDGDKGRLGHGDK--EAKLVPTCVVALLEPNFCQVACGHSMTVALSRS 557
G L+ WG +G+LG G+ EA+ VP+ V L + +V+ G +AL+
Sbjct: 154 ----DDGSLWVWGRSKRGQLGLGNGIIEAR-VPSRVENLAAEHVVKVSLGWGHALALTVD 208
Query: 558 GHVYTMGSCVYGQLGNPKADGKLPTRVEGKLSKSFVEEIACGAY--HVAVLTSRTEVYTW 615
G V+ G G++GN LP L S ++ I G+ H A E
Sbjct: 209 GKVFGWGYVADGRVGNV----GLP------LEASLLDSITDGSMKGHHAAGDLNLEAAE- 257
Query: 616 GKGANGRLGHGDTDDKNSPTLVEALKDKQVKSIACGTNFTAAIC 659
K D P LVE +++V IACG++ + +C
Sbjct: 258 KKVVEAMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLILC 301
>AT5G48330.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:19585989-19587729 FORWARD
LENGTH=455
Length = 455
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 160/384 (41%), Gaps = 44/384 (11%)
Query: 302 MDSLLPKALESAVVLDVQNIACGGKHAALVSKQGEIFSWGEESGGRLGHGV-DS---DVP 357
MD+ P + S + D+ +I+ G H+ V+ GEI++WG G+LG V DS
Sbjct: 69 MDAYEPTVV-SNLPSDISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRS 127
Query: 358 HPKLIESLSSTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQ-VSHWAPKRV 416
PK +E L + N++ + A+ G L+ W G G LG GN + P RV
Sbjct: 128 EPKRVEGLENVNVQAAFASGVVSAAIGDDGSLWVW--GRSKRGQLGLGNGIIEARVPSRV 185
Query: 417 HGLLEGIHVSSISCGPWHTAVVTSAVQLFTFG---DGTFGVLGHGDRKSVSLPREIESLK 473
L HV +S G H +T ++F +G DG G +G S+ S+K
Sbjct: 186 EN-LAAEHVVKVSLGWGHALALTVDGKVFGWGYVADGRVGNVGLPLEASLLDSITDGSMK 244
Query: 474 G-------------LRTVQAA------------CGVWHTA--AVVEVMVGXXXXXXX-XX 505
G + V+A C V T V ++ G
Sbjct: 245 GHHAAGDLNLEAAEKKVVEAMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLILCHD 304
Query: 506 GKLFTWGDGDKGRLGHGDKEAKLVPTCVVALLEPNFCQVACGHSMTVALSRSGHVYTMGS 565
G L + G G+LG ++ + P + P GHS+ + ++ + G
Sbjct: 305 GTLLSAGSNIYGQLGRSKQDLGMKPVDITE--SPISIAAGLGHSLAICNRGERNILSWGW 362
Query: 566 CVYGQLGNPKADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGH 625
QLG K + LP VEG +S ++ G H +T + E + WG G NGRLG
Sbjct: 363 NRSRQLGRGKPE-NLPREVEGFDGESPA-SVSAGRVHSLCVTEKGEAWVWGCGKNGRLGL 420
Query: 626 GDTDDKNSPTLVEALKDKQVKSIA 649
G + D+ P L+E ++ ++++A
Sbjct: 421 GSSSDEPEPMLLEDVEGCVLQAVA 444
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 125/285 (43%), Gaps = 42/285 (14%)
Query: 389 LYTWGDGTYNYGLLGH------GNQVSHWAPKRVHGLLEGIHVSSISCGPWHTAVVTSAV 442
+ ++GDG N G LG G + + P V L I SSIS G +H+ VTS+
Sbjct: 46 VMSFGDG--NLGALGLSSSSIPGMGMDAYEPTVVSNLPSDI--SSISAGHYHSLAVTSSG 101
Query: 443 QLFTFGDGTFGVLGH----GDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGXX 498
+++ +G G LG R S S P+ +E L+ + VQAA + VV +G
Sbjct: 102 EIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENV-NVQAA----FASGVVSAAIGDD 156
Query: 499 XXXXXXXGKLFTWGDGDKGRLGHGDK--EAKLVPTCVVALLEPNFCQVACGHSMTVALSR 556
G L+ WG +G+LG G+ EA+ VP+ V L + +V+ G +AL+
Sbjct: 157 -------GSLWVWGRSKRGQLGLGNGIIEAR-VPSRVENLAAEHVVKVSLGWGHALALTV 208
Query: 557 SGHVYTMGSCVYGQLGNPKADGKLPTRVEGKLSKSFVEEIACGAY--HVAVLTSRTEVYT 614
G V+ G G++GN LP L S ++ I G+ H A E
Sbjct: 209 DGKVFGWGYVADGRVGNVG----LP------LEASLLDSITDGSMKGHHAAGDLNLEAAE 258
Query: 615 WGKGANGRLGHGDTDDKNSPTLVEALKDKQVKSIACGTNFTAAIC 659
K D P LVE +++V IACG++ + +C
Sbjct: 259 -KKVVEAMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLILC 302