Miyakogusa Predicted Gene
- Lj6g3v0938270.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0938270.1 Non Chatacterized Hit- tr|I1KXU9|I1KXU9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,81.31,0,no
description,Tetratricopeptide-like helical; PENTATRICOPEPTIDE (PPR)
REPEAT-CONTAINING PROTEIN,NUL,CUFF.58704.1
(729 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 922 0.0
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 496 e-140
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 493 e-139
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 486 e-137
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 484 e-136
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 476 e-134
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 472 e-133
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 462 e-130
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 461 e-130
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 457 e-128
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 456 e-128
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 455 e-128
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 453 e-127
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 453 e-127
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 453 e-127
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 451 e-126
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 449 e-126
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 447 e-125
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 446 e-125
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 446 e-125
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 446 e-125
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 445 e-125
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 439 e-123
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 438 e-123
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 437 e-122
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 434 e-122
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 433 e-121
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 432 e-121
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 429 e-120
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 429 e-120
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 427 e-119
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 425 e-119
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 424 e-118
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 424 e-118
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 422 e-118
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 420 e-117
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 419 e-117
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 416 e-116
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 414 e-115
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 411 e-115
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 410 e-114
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 409 e-114
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 407 e-113
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 407 e-113
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 404 e-113
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 404 e-112
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 403 e-112
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 403 e-112
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 402 e-112
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 401 e-112
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 401 e-111
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 399 e-111
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 397 e-110
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 396 e-110
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 392 e-109
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 391 e-109
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 391 e-108
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 389 e-108
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 386 e-107
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 386 e-107
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 385 e-107
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 385 e-107
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 384 e-106
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 384 e-106
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 384 e-106
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 379 e-105
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 379 e-105
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 377 e-104
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 374 e-103
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 374 e-103
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 371 e-103
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 367 e-101
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 366 e-101
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 363 e-100
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 363 e-100
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 360 2e-99
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 360 3e-99
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 358 6e-99
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 350 2e-96
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 349 4e-96
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 348 5e-96
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 347 2e-95
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 343 4e-94
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 338 6e-93
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 334 1e-91
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 332 4e-91
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 331 1e-90
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 327 2e-89
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 327 2e-89
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 5e-89
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 324 2e-88
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 4e-88
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 322 7e-88
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 321 1e-87
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 1e-86
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 316 4e-86
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 314 2e-85
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 4e-85
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 312 5e-85
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 311 8e-85
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 2e-84
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 2e-84
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 3e-84
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 309 5e-84
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 308 9e-84
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 2e-83
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 2e-82
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 303 3e-82
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 301 8e-82
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 3e-81
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 4e-81
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 6e-81
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 6e-81
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 6e-81
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 1e-80
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 2e-80
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 294 1e-79
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 294 1e-79
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 9e-79
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 3e-78
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 288 1e-77
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 285 6e-77
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 1e-76
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 1e-76
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 283 2e-76
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 283 3e-76
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 4e-76
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 281 9e-76
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 281 2e-75
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 5e-75
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 6e-75
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 279 6e-75
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 278 1e-74
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 4e-74
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 1e-73
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 273 4e-73
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 272 5e-73
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 270 4e-72
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 268 1e-71
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 1e-71
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 6e-71
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 6e-71
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 7e-71
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 264 2e-70
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 264 2e-70
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 263 2e-70
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 7e-69
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 4e-68
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 6e-68
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 2e-66
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 5e-66
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 5e-66
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 249 5e-66
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 5e-66
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 1e-65
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 5e-65
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 243 4e-64
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 6e-64
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 2e-63
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 7e-63
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 3e-62
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 5e-62
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 7e-62
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 5e-59
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 6e-59
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 4e-58
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 2e-55
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 3e-55
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 206 7e-53
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 7e-53
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 1e-51
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 2e-51
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 6e-49
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 2e-48
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 3e-48
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 181 2e-45
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 6e-42
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 4e-39
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 7e-38
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 1e-33
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 3e-33
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 124 2e-28
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 9e-25
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 1e-24
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 4e-23
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 6e-23
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 6e-23
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 8e-23
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 104 2e-22
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 8e-22
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 98 2e-20
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 3e-20
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 96 6e-20
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 9e-20
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 1e-19
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 1e-19
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 4e-19
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 5e-19
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 93 8e-19
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 8e-19
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 92 9e-19
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 92 1e-18
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 2e-18
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 91 2e-18
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 91 3e-18
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 4e-18
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 7e-18
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 89 9e-18
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 5e-17
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 6e-17
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 7e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 2e-16
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 85 2e-16
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 5e-16
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 81 3e-15
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 81 3e-15
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 80 4e-15
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 77 4e-14
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 4e-14
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 6e-14
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 9e-14
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 1e-13
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 1e-13
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-13
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-13
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-13
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-13
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 70 7e-12
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 7e-12
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-11
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 67 6e-11
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 64 5e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 64 6e-10
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 6e-10
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 6e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 63 7e-10
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 63 1e-09
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 62 2e-09
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 61 3e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 7e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 7e-09
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 9e-09
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 4e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 53 6e-07
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 53 7e-07
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 53 8e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 52 2e-06
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 50 4e-06
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 7e-06
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 7e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 8e-06
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 922 bits (2384), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/713 (62%), Positives = 551/713 (77%), Gaps = 2/713 (0%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF +LL + +++RD+ TGKSLHALY+K+ + STYLSNHF LYSKCG L AR +F T
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
PNVFSYN I+ A K S +H+AR+LFDEIP+PD VSYNTLI+ +A E A+ LFK
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLL 197
R+ G +DGFTLSG+I AC + V L+ QLHCF+V G+ Y+SV NA + Y GLL
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLL 189
Query: 198 SEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLT 257
EA VF+ M E RDE+SWN+MIVA GQ +EG +AL L+ EM+ G KIDMFT+ASVL
Sbjct: 190 REAVSVFYGMDE-LRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248
Query: 258 AFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAP-RGMLDCMKVFEEISEPD 316
A T L+ L GG QFHG++IK+GF+ N HVGSGLID YSKC GM D KVF+EI PD
Sbjct: 249 ALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPD 308
Query: 317 LVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVH 376
LV+WNTMISG+S +E+LSE+A+ F+ MQR G RPDDCSF CVTSACSNLSSPS KQ+H
Sbjct: 309 LVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIH 368
Query: 377 ALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVE 436
LAIKS IPSNR+SVNNAL+++Y K GNL DAR VFD MPE N VS N MI GYAQHG
Sbjct: 369 GLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHG 428
Query: 437 GESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSC 496
E+L L++ M+ I PN ITF++VLSACAH GKV+EGQ+YFN MKE F IEPEA+H+SC
Sbjct: 429 TEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSC 488
Query: 497 MVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHN 556
M+DLLGRAGKLEEAER I+ MP+ PGS+ WAALLGACRKH N+ LA +AAN+ + ++P
Sbjct: 489 MIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLA 548
Query: 557 AVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMI 616
A PYVML+NMYA A +WEE A+V++ MR + ++KKPGCSWI++ K HVFVAED SHPMI
Sbjct: 549 ATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMI 608
Query: 617 KEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKE 676
+E++EY+ EM++KMK+ GYV D +WA+ K+++ ++E RL +HSEKLAVAFGL+ST++
Sbjct: 609 REVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRD 668
Query: 677 GVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
G ++VVKNLRICGDCHNAIK +SA++GREI VRD RFHCFK+G CSC DYW
Sbjct: 669 GEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 496 bits (1278), Expect = e-140, Method: Compositional matrix adjust.
Identities = 279/741 (37%), Positives = 413/741 (55%), Gaps = 41/741 (5%)
Query: 23 LKQCI---SQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNN 79
+KQCI ++ K +H I+ T+L N+ Y+ + AR F
Sbjct: 10 IKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ 69
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE- 138
PN+FS+N ++ A K + F+++P D V++N LI ++ G G AV+ +
Sbjct: 70 PNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
Query: 139 AREAGLCLDGFTLSGVIKACRED--VGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGL 196
R+ L TL ++K + V L Q+H + G+ Y V + +L Y G
Sbjct: 130 MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 197 LSEAWRVFHEMGE--------------GC--------------RDEISWNAMIVACGQCR 228
+S+A +VF+ + + C +D +SW AMI Q
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNG 249
Query: 229 EGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGS 288
KEA+ F EM G+K+D + SVL A L + G Q H +I++ F + +VGS
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 289 GLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAG 348
LIDMY KC + + VF+ + + ++V W M+ G+ Q +E+A+ F DMQR+G
Sbjct: 310 ALIDMYCKC--KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQ-TGRAEEAVKIFLDMQRSG 366
Query: 349 FRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDA 408
PD + SAC+N+SS G Q H AI S + + V+V+N+LV +Y KCG++ D+
Sbjct: 367 IDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLI-HYVTVSNSLVTLYGKCGDIDDS 425
Query: 409 RRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHT 468
R+F+ M + VS +M++ YAQ G E++QLF+ M+Q + P+ +T V+SAC+
Sbjct: 426 TRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRA 485
Query: 469 GKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAA 528
G VE+GQ+YF +M ++GI P H+SCM+DL R+G+LEEA R I MPF P +I W
Sbjct: 486 GLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTT 545
Query: 529 LLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGV 588
LL ACR GN+E+ AA ++L+PH+ Y +LS++YAS G+W+ A ++R MRE+ V
Sbjct: 546 LLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNV 605
Query: 589 KKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDED 648
KK+PG SWI+ K+H F A+D S P + +I+ + E+ K+ GY PD + D
Sbjct: 606 KKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFV---HHD 662
Query: 649 VAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREIT 708
V K + L YHSE+LA+AFGLI G PI V KNLR+C DCHNA K IS+++GREI
Sbjct: 663 VEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREIL 722
Query: 709 VRDAHRFHCFKEGHCSCKDYW 729
VRDA RFH FK+G CSC D+W
Sbjct: 723 VRDAVRFHRFKDGTCSCGDFW 743
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 201/461 (43%), Gaps = 44/461 (9%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T +LK S +S GK +H IK + + +Y+ G + +A+ F
Sbjct: 141 TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGL 200
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
++ N YN+++ + + A +LF + + D VS+ +I A G A+ F+
Sbjct: 201 DDRNTVMYNSLMGGLLACGMIEDALQLFRGMEK-DSVSWAAMIKGLAQNGLAKEAIECFR 259
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLV---MQLHCFAVLCGYSCYASVCNAVLARYGGR 194
E + GL +D + V+ AC +G + Q+H + + + V +A++ Y
Sbjct: 260 EMKVQGLKMDQYPFGSVLPAC-GGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC 318
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
L A VF M + ++ +SW AM+V GQ +EA+ +F +M R G+ D +T+
Sbjct: 319 KCLHYAKTVFDRMKQ--KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQ 376
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISE 314
++A + L G QFHG+ I SG V + L+ +Y KC + D ++F E++
Sbjct: 377 AISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGD--IDDSTRLFNEMNV 434
Query: 315 PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQ 374
D V W M+S ++Q E + F M + G +PD + + V SACS G++
Sbjct: 435 RDAVSWTAMVSAYAQFGRAVE-TIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQR 493
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHG 434
L + + ++ ++S+ G L +A R + MP
Sbjct: 494 YFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP------------------ 535
Query: 435 VEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQ 475
P+ I + ++LSAC + G +E G+
Sbjct: 536 ----------------FPPDAIGWTTLLSACRNKGNLEIGK 560
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 493 bits (1270), Expect = e-139, Method: Compositional matrix adjust.
Identities = 296/781 (37%), Positives = 436/781 (55%), Gaps = 82/781 (10%)
Query: 20 TNLLKQCISQRDIS-TGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTN 78
TNLL++ +++ + T + +H IK+ + S YL N+ +YSK G +AR F
Sbjct: 17 TNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMP 76
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
FS+N ++ A K + E FD++P+ D VS+ T+I + + G++ A+R+ +
Sbjct: 77 LRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGD 136
Query: 139 AREAGLCLDGFTLSGVIKA-----CREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYG- 192
+ G+ FTL+ V+ + C E ++H F V G SV N++L Y
Sbjct: 137 MVKEGIEPTQFTLTNVLASVAATRCMETGK---KVHSFIVKLGLRGNVSVSNSLLNMYAK 193
Query: 193 -GRGLLSE------------AWRV-----------------FHEMGEGCRDEISWNAMIV 222
G ++++ +W F +M E RD ++WN+MI
Sbjct: 194 CGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE--RDIVTWNSMIS 251
Query: 223 ACGQCREGKEALVLFGEMVRMGM-KIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFN 281
Q AL +F +M+R + D FT+ASVL+A LE L G Q H ++ +GF+
Sbjct: 252 GFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFD 311
Query: 282 WNPHVGSGLIDMYSKCA----------PRGMLD---------------------CMKVFE 310
+ V + LI MYS+C RG D +F
Sbjct: 312 ISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFV 371
Query: 311 EISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPS 370
+ + D+V W MI G+ QH E A+ F+ M G RP+ + + + S S+L+S S
Sbjct: 372 SLKDRDVVAWTAMIVGYEQHGSYGE-AINLFRSMVGGGQRPNSYTLAAMLSVASSLASLS 430
Query: 371 LGKQVHALAIKS-DIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP-EHNTVSLNSMIT 428
GKQ+H A+KS +I S VSV+NAL+ MY+K GN+ A R FD + E +TVS SMI
Sbjct: 431 HGKQIHGSAVKSGEIYS--VSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMII 488
Query: 429 GYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIE 488
AQHG E+L+LFE M+ E + P++IT++ V SAC H G V +G++YF+MMK+ I
Sbjct: 489 ALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKII 548
Query: 489 PEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANK 548
P H++CMVDL GRAG L+EA+ IE MP +P + W +LL ACR H N++L AA +
Sbjct: 549 PTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAER 608
Query: 549 FLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVA 608
L LEP N+ Y L+N+Y++ G+WEE+A +++ M++ VKK+ G SWI++ +KVHVF
Sbjct: 609 LLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGV 668
Query: 609 EDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVA 668
ED +HP EI+ M ++ ++K+ GYVPD L D+ E KE+ L +HSEKLA+A
Sbjct: 669 EDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVL---HDLEEEVKEQILRHHSEKLAIA 725
Query: 669 FGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDY 728
FGLIST + + ++KNLR+C DCH AIK IS + GREI VRD RFH FK+G CSC+DY
Sbjct: 726 FGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDY 785
Query: 729 W 729
W
Sbjct: 786 W 786
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 146/536 (27%), Positives = 245/536 (45%), Gaps = 76/536 (14%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T TN+L + R + TGK +H+ +K + + +SN +Y+KCG A+ F
Sbjct: 148 TLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRM 207
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLF- 136
++ S+NA+I ++ + LA F+++ DIV++N++I+ RG A+ +F
Sbjct: 208 VVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFS 267
Query: 137 KEAREAGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGR 194
K R++ L D FTL+ V+ AC E + + Q+H V G+ V NA+++ Y
Sbjct: 268 KMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRC 327
Query: 195 GLLSEAWRVFHEMG------EGC-------------------------RDEISWNAMIVA 223
G + A R+ + G EG RD ++W AMIV
Sbjct: 328 GGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVG 387
Query: 224 CGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWN 283
Q EA+ LF MV G + + +T+A++L+ + L L+ G Q HG +KSG ++
Sbjct: 388 YEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYS 447
Query: 284 PHVGSGLIDMYSKCAPRGMLDCMKVFEEIS-EPDLVLWNTMISGFSQHEDLSEDALICFQ 342
V + LI MY+K + + F+ I E D V W +MI +QH +E+AL F+
Sbjct: 448 VSVSNALITMYAKAG--NITSASRAFDLIRCERDTVSWTSMIIALAQHGH-AEEALELFE 504
Query: 343 DMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKC 402
M G RPD ++ V SAC++ + G+Q + D +S +V ++ +
Sbjct: 505 TMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRA 564
Query: 403 GNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVL 462
G L +A+ + MP I P+ +T+ S+L
Sbjct: 565 GLLQEAQEFIEKMP----------------------------------IEPDVVTWGSLL 590
Query: 463 SACAHTGKVEEGQKYFNMMKEKFGIEPE-AKHFSCMVDLLGRAGKLEEAERIIETM 517
SAC ++ G+ + +EPE + +S + +L GK EEA +I ++M
Sbjct: 591 SACRVHKNIDLGKVAAERL---LLLEPENSGAYSALANLYSACGKWEEAAKIRKSM 643
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 45/249 (18%)
Query: 351 PDDCSFSCVTSACSNLSSPSLGKQ--------VHALAIKSDIPSNRVSVNNALVAMYSKC 402
P S S + C+NL S+ K VH IKS + + +NN L+ +YSK
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNN-LMNVYSKT 62
Query: 403 GNLHDARRVFDTM-------------------------------PEHNTVSLNSMITGYA 431
G AR++FD M P+ ++VS +MI GY
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYK 122
Query: 432 QHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEA 491
G +++++ M++E I P T +VL++ A T +E G+K + + K G+
Sbjct: 123 NIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIV-KLGLRGNV 181
Query: 492 KHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ 551
+ ++++ + G A+ + + M S W A++ + G ++LA+ +F Q
Sbjct: 182 SVSNSLLNMYAKCGDPMMAKFVFDRMVVRDIS-SWNAMIALHMQVGQMDLAMA---QFEQ 237
Query: 552 LEPHNAVPY 560
+ + V +
Sbjct: 238 MAERDIVTW 246
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 486 bits (1251), Expect = e-137, Method: Compositional matrix adjust.
Identities = 265/655 (40%), Positives = 389/655 (59%), Gaps = 12/655 (1%)
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
NP + N ++ + + L LA LF+EIP D V++NTLI + G + ++ LF
Sbjct: 180 TNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFL 239
Query: 138 EAREAGLCLDGFTLSGVIKAC--REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
+ R++G FT SGV+KA D L QLH +V G+S ASV N +L Y
Sbjct: 240 KMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHD 299
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
+ E +F EM E D +S+N +I + Q + + +L F EM MG F A++
Sbjct: 300 RVLETRMLFDEMPE--LDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATM 357
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEP 315
L+ L L G Q H + + + + HVG+ L+DMY+KC + +F+ + +
Sbjct: 358 LSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKC--EMFEEAELIFKSLPQR 415
Query: 316 DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQV 375
V W +ISG+ Q + L L F M+ + R D +F+ V A ++ +S LGKQ+
Sbjct: 416 TTVSWTALISGYVQ-KGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQL 474
Query: 376 HALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGV 435
HA I+S N S + LV MY+KCG++ DA +VF+ MP+ N VS N++I+ +A +G
Sbjct: 475 HAFIIRSGNLENVFS-GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGD 533
Query: 436 EGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFS 495
++ F M++ + P++++ + VL+AC+H G VE+G +YF M +GI P+ KH++
Sbjct: 534 GEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYA 593
Query: 496 CMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEP- 554
CM+DLLGR G+ EAE++++ MPF+P I W+++L ACR H N LA +AA K +E
Sbjct: 594 CMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKL 653
Query: 555 HNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHP 614
+A YV +SN+YA+AG WE+ VK+ MRERG+KK P SW+++++K+HVF + D +HP
Sbjct: 654 RDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHP 713
Query: 615 MIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLIST 674
EI + E+ ++++ GY PD + +DV + K L YHSE+LAVAF LIST
Sbjct: 714 NGDEIVRKINELTAEIEREGYKPDTSSVV---QDVDEQMKIESLKYHSERLAVAFALIST 770
Query: 675 KEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
EG PI+V+KNLR C DCH AIKLIS I REITVRD RFH F EG CSC DYW
Sbjct: 771 PEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 221 bits (563), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 158/527 (29%), Positives = 266/527 (50%), Gaps = 16/527 (3%)
Query: 36 KSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAIIDACVKH 95
+ + A IKT T SN + G + AR + + N S N +I VK
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 96 SHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCL--DGFTLSG 153
+ AR+LFD +P +V++ L+ +A A +LF++ + C D T +
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 154 VIKACREDV--GLVMQLHCFAVLCGYSC--YASVCNAVLARYGGRGLLSEAWRVFHEMGE 209
++ C + V V Q+H FAV G+ + +V N +L Y L A +F E+ E
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 210 GCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGM 269
+D +++N +I + E++ LF +M + G + FT + VL A L D A G
Sbjct: 213 --KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQ 270
Query: 270 QFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQ 329
Q H + +GF+ + VG+ ++D YSK +L+ +F+E+ E D V +N +IS +SQ
Sbjct: 271 QLHALSVTTGFSRDASVGNQILDFYSK--HDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 330 HEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRV 389
D E +L F++MQ GF + F+ + S +NLSS +G+Q+H A+ + S +
Sbjct: 329 -ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADS-IL 386
Query: 390 SVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQE 449
V N+LV MY+KC +A +F ++P+ TVS ++I+GY Q G+ G L+LF M
Sbjct: 387 HVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGS 446
Query: 450 DIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEE 509
++ + TF +VL A A + G++ + +E S +VD+ + G +++
Sbjct: 447 NLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVDMYAKCGSIKD 505
Query: 510 AERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ--LEP 554
A ++ E MP D ++ W AL+ A +G+ E A+ A K ++ L+P
Sbjct: 506 AVQVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQP 551
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 93/211 (44%), Gaps = 37/211 (17%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF +LK S + GK LHA I++ G L+N
Sbjct: 454 TFATVLKASASFASLLLGKQLHAFIIRS-------------------GNLEN-------- 486
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
VFS + ++D K + A ++F+E+P + VS+N LI+AHA G+ A+ F
Sbjct: 487 ----VFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFA 542
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQ----LHCFAVLCGYSCYASVCNAVLARYGG 193
+ E+GL D ++ GV+ AC G V Q + + G + +L G
Sbjct: 543 KMIESGLQPDSVSILGVLTACSH-CGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGR 601
Query: 194 RGLLSEAWRVFHEMGEGCRDEISWNAMIVAC 224
G +EA ++ EM DEI W++++ AC
Sbjct: 602 NGRFAEAEKLMDEMPFE-PDEIMWSSVLNAC 631
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 484 bits (1245), Expect = e-136, Method: Compositional matrix adjust.
Identities = 263/647 (40%), Positives = 381/647 (58%), Gaps = 13/647 (2%)
Query: 86 NAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLC 145
N++I+ K AR +FD + D++S+N++IA A G AV LF + GL
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK 413
Query: 146 LDGFTLSGVIKACR---EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWR 202
D +T++ V+KA E + L Q+H A+ + V A++ Y + EA
Sbjct: 414 PDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEI 473
Query: 203 VFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCL 262
+F D ++WNAM+ Q +G + L LF M + G + D FT+A+V L
Sbjct: 474 LFERHN---FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFL 530
Query: 263 EDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNT 322
+ G Q H IKSG++ + V SG++DMY KC M F+ I PD V W T
Sbjct: 531 FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGD--MSAAQFAFDSIPVPDDVAWTT 588
Query: 323 MISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKS 382
MISG ++ + E A F M+ G PD+ + + + A S L++ G+Q+HA A+K
Sbjct: 589 MISGCIENGE-EERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKL 647
Query: 383 DIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQL 442
+ +N V +LV MY+KCG++ DA +F + N + N+M+ G AQHG E+LQL
Sbjct: 648 NC-TNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQL 706
Query: 443 FELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLG 502
F+ M I P+ +TFI VLSAC+H+G V E K+ M +GI+PE +H+SC+ D LG
Sbjct: 707 FKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALG 766
Query: 503 RAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVM 562
RAG +++AE +IE+M + + + LL ACR G+ E + A K L+LEP ++ YV+
Sbjct: 767 RAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVL 826
Query: 563 LSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEY 622
LSNMYA+A +W+E + +M+ VKK PG SWI++ NK+H+FV +D S+ + I+
Sbjct: 827 LSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRK 886
Query: 623 MGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILV 682
+ +M+R +KQ GYVP+ + L DV EEKER L YHSEKLAVAFGL+ST PI V
Sbjct: 887 VKDMIRDIKQEGYVPETDFTL---VDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRV 943
Query: 683 VKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
+KNLR+CGDCHNA+K I+ + REI +RDA+RFH FK+G CSC DYW
Sbjct: 944 IKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 216/482 (44%), Gaps = 51/482 (10%)
Query: 83 FSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREA 142
F A+++ +K + + LF+E+P D+V +N ++ A+ G A+ L +
Sbjct: 181 FVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSS 240
Query: 143 GLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVC--NAVLARYGGRGLLSEA 200
GL + TL + + +D Q+ FA S + + N L+ Y G S
Sbjct: 241 GLNPNEITLRLLARISGDDSD-AGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSAL 299
Query: 201 WRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFT 260
+ F +M E V C Q V F M+ +K+D
Sbjct: 300 LKCFADMVES----------DVECDQ--------VTFILMLATAVKVD------------ 329
Query: 261 CLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLW 320
LA G Q H +K G + V + LI+MY K G VF+ +SE DL+ W
Sbjct: 330 ---SLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGF--ARTVFDNMSERDLISW 384
Query: 321 NTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNL-SSPSLGKQVHALA 379
N++I+G +Q+ L +A+ F + R G +PD + + V A S+L SL KQVH A
Sbjct: 385 NSVIAGIAQN-GLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHA 443
Query: 380 IKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHN--TVSLNSMITGYAQHGVEG 437
IK + S+ V+ AL+ YS+ + +A +F+ HN V+ N+M+ GY Q
Sbjct: 444 IKINNVSDSF-VSTALIDAYSRNRCMKEAEILFE---RHNFDLVAWNAMMAGYTQSHDGH 499
Query: 438 ESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCM 497
++L+LF LM ++ ++ T +V C + +G K + K G + + S +
Sbjct: 500 KTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQG-KQVHAYAIKSGYDLDLWVSSGI 558
Query: 498 VDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNA 557
+D+ + G + A+ +++P P + W ++ C ++G E +A + F Q+
Sbjct: 559 LDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCIENGEEE---RAFHVFSQMRLMGV 614
Query: 558 VP 559
+P
Sbjct: 615 LP 616
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 130/517 (25%), Positives = 215/517 (41%), Gaps = 78/517 (15%)
Query: 22 LLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPN 81
L+ I+ D+ GK HA + +L N+ +YSKCG+L
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLT------------- 91
Query: 82 VFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGE-----HGPAVRLF 136
AR +FD++P D+VS+N+++AA+A E A LF
Sbjct: 92 ------------------YARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLF 133
Query: 137 KEAREAGLCLDGFTLSGVIKACRED--VGLVMQLHCFAVLCGYSCYASVCNAVLARYGGR 194
+ R+ + TLS ++K C V H +A G V A++ Y
Sbjct: 134 RILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKF 193
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
G + E +F EM RD + WN M+ A + +EA+ L G+ + T+
Sbjct: 194 GKVKEGKVLFEEMPY--RDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLR- 250
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISE 314
L A +D G +KS N N + S
Sbjct: 251 -LLARISGDDSDAG------QVKSFANGN--------------------------DASSV 277
Query: 315 PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQ 374
+++ N +S + H L CF DM + D +F + + + S +LG+Q
Sbjct: 278 SEIIFRNKGLSEY-LHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQ 336
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHG 434
VH +A+K + ++V+N+L+ MY K AR VFD M E + +S NS+I G AQ+G
Sbjct: 337 VHCMALKLGLDL-MLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNG 395
Query: 435 VEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHF 494
+E E++ LF +++ + P+ T SVL A + + K ++ K ++
Sbjct: 396 LEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVS 455
Query: 495 SCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLG 531
+ ++D R ++EAE + E FD + W A++
Sbjct: 456 TALIDAYSRNRCMKEAEILFERHNFDL--VAWNAMMA 490
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 99/184 (53%), Gaps = 8/184 (4%)
Query: 371 LGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGY 430
LGK HA + + R +NN L++MYSKCG+L ARRVFD MP+ + VS NS++ Y
Sbjct: 57 LGKCTHARILTFEENPERFLINN-LISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAY 115
Query: 431 AQHG---VEG--ESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKF 485
AQ VE ++ LF ++ Q+ + + +T +L C H+G V + F+ K
Sbjct: 116 AQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASES-FHGYACKI 174
Query: 486 GIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKA 545
G++ + +V++ + GK++E + + E MP+ + W +L A + G E A+
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPY-RDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 546 ANKF 549
++ F
Sbjct: 234 SSAF 237
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 476 bits (1224), Expect = e-134, Method: Compositional matrix adjust.
Identities = 254/648 (39%), Positives = 394/648 (60%), Gaps = 16/648 (2%)
Query: 86 NAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLC 145
N++I+ +K ++ AR LFD+ +V++N++I+ +A G A+ +F R +
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVR 292
Query: 146 LDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRV 203
L + + VIK C +++ QLHC V G+ ++ A++ Y + +A R+
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRL 352
Query: 204 FHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLE 263
F E+G + +SW AMI Q +EA+ LF EM R G++ + FT + +LTA +
Sbjct: 353 FKEIG-CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS 411
Query: 264 DLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTM 323
+ H +++K+ + + VG+ L+D Y K + + KVF I + D+V W+ M
Sbjct: 412 P----SEVHAQVVKTNYERSSTVGTALLDAYVKLGK--VEEAAKVFSGIDDKDIVAWSAM 465
Query: 324 ISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNL-SSPSLGKQVHALAIKS 382
++G++Q + +E A+ F ++ + G +P++ +FS + + C+ +S GKQ H AIKS
Sbjct: 466 LAGYAQTGE-TEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKS 524
Query: 383 DIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQL 442
+ S+ + V++AL+ MY+K GN+ A VF E + VS NSMI+GYAQHG ++L +
Sbjct: 525 RLDSS-LCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDV 583
Query: 443 FELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLG 502
F+ M + + + +TFI V +AC H G VEEG+KYF++M I P +H SCMVDL
Sbjct: 584 FKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYS 643
Query: 503 RAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVM 562
RAG+LE+A ++IE MP GS W +L ACR H EL AA K + ++P ++ YV+
Sbjct: 644 RAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVL 703
Query: 563 LSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEY 622
LSNMYA +G W+E A V++LM ER VKK+PG SWI++ NK + F+A D SHP+ +I+
Sbjct: 704 LSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMK 763
Query: 623 MGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILV 682
+ ++ ++K GY PD + L +D+ E KE L HSE+LA+AFGLI+T +G P+L+
Sbjct: 764 LEDLSTRLKDLGYEPDTSYVL---QDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLI 820
Query: 683 VKNLRICGDCHNAIKLISAISGREITVRDAHRFHCF-KEGHCSCKDYW 729
+KNLR+CGDCH IKLI+ I REI VRD++RFH F +G CSC D+W
Sbjct: 821 IKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 182 bits (461), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 242/471 (51%), Gaps = 17/471 (3%)
Query: 86 NAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLC 145
+++D +K S+ R++FDE+ ++V++ TLI+ +A + + LF + G
Sbjct: 132 TSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ 191
Query: 146 LDGFTLSGVIKACRED--VGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRV 203
+ FT + + E+ G +Q+H V G V N+++ Y G + +A R+
Sbjct: 192 PNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKA-RI 250
Query: 204 FHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLE 263
+ E + ++WN+MI EAL +F M +++ + ASV+ L+
Sbjct: 251 LFDKTE-VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLK 309
Query: 264 DLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEIS-EPDLVLWNT 322
+L Q H ++K GF ++ ++ + L+ YSKC MLD +++F+EI ++V W
Sbjct: 310 ELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT--AMLDALRLFKEIGCVGNVVSWTA 367
Query: 323 MISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKS 382
MISGF Q+ D E+A+ F +M+R G RP++ ++S + +A + SPS +VHA +K+
Sbjct: 368 MISGFLQN-DGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI-SPS---EVHAQVVKT 422
Query: 383 DIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQL 442
+ + +V AL+ Y K G + +A +VF + + + V+ ++M+ GYAQ G ++++
Sbjct: 423 NYERSS-TVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKM 481
Query: 443 FELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLG 502
F + + I PN TF S+L+ CA T K F+ K ++ S ++ +
Sbjct: 482 FGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYA 541
Query: 503 RAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLE 553
+ G +E AE + + + + W +++ +HG A+KA + F +++
Sbjct: 542 KKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQHGQ---AMKALDVFKEMK 588
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 137/495 (27%), Positives = 232/495 (46%), Gaps = 22/495 (4%)
Query: 56 HFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVS 115
FT + +L+N + FR+ N V V S L+ A LFD+ P D S
Sbjct: 2 RFTTTIWRPPSLENFKPKFRIYAN-GVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRES 60
Query: 116 YNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKA----CREDVGLVMQLHCF 171
Y +L+ + G A RLF G+ +D S V+K C E G QLHC
Sbjct: 61 YISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFG--RQLHCQ 118
Query: 172 AVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGK 231
+ G+ SV +++ Y + +VF EM E R+ ++W +I +
Sbjct: 119 CIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKE--RNVVTWTTLISGYARNSMND 176
Query: 232 EALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAG-GMQFHGRMIKSGFNWNPHVGSGL 290
E L LF M G + + FT A+ L E + G G+Q H ++K+G + V + L
Sbjct: 177 EVLTLFMRMQNEGTQPNSFTFAAALGVL-AEEGVGGRGLQVHTVVVKNGLDKTIPVSNSL 235
Query: 291 IDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFR 350
I++Y KC + +F++ +V WN+MISG++ + L +AL F M+ R
Sbjct: 236 INLYLKCG--NVRKARILFDKTEVKSVVTWNSMISGYAAN-GLDLEALGMFYSMRLNYVR 292
Query: 351 PDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARR 410
+ SF+ V C+NL +Q+H +K ++ ++ AL+ YSKC + DA R
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ-NIRTALMVAYSKCTAMLDALR 351
Query: 411 VFDTMP-EHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTG 469
+F + N VS +MI+G+ Q+ + E++ LF M ++ + PN T+ +L+A
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP--- 408
Query: 470 KVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAAL 529
+ + + ++K + E + + ++D + GK+EEA ++ + D + W+A+
Sbjct: 409 VISPSEVHAQVVKTNY--ERSSTVGTALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAM 465
Query: 530 LGACRKHGNVELAVK 544
L + G E A+K
Sbjct: 466 LAGYAQTGETEAAIK 480
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 193/390 (49%), Gaps = 17/390 (4%)
Query: 212 RDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQF 271
RD S+ +++ + +EA LF + R+GM++D +SVL L D G Q
Sbjct: 56 RDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQL 115
Query: 272 HGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHE 331
H + IK GF + VG+ L+D Y K + D KVF+E+ E ++V W T+ISG++++
Sbjct: 116 HCQCIKFGFLDDVSVGTSLVDTYMKGS--NFKDGRKVFDEMKERNVVTWTTLISGYARNS 173
Query: 332 DLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSV 391
++++ L F MQ G +P+ +F+ + G QVH + +K+ + + V
Sbjct: 174 -MNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT-IPV 231
Query: 392 NNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDI 451
+N+L+ +Y KCGN+ AR +FD + V+ NSMI+GYA +G++ E+L +F M +
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291
Query: 452 VPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAE 511
+ +F SV+ CA+ ++ ++ + K+G + + ++ + + +A
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQ-LHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDAL 350
Query: 512 RIIETMPFDPGSIEWAALLGACRKHGNVELAVK----------AANKFLQLEPHNAVPYV 561
R+ + + + W A++ ++ E AV N+F A+P +
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI 410
Query: 562 MLSNMYASAGR--WEESATVKRLMRERGVK 589
S ++A + +E S+TV + + VK
Sbjct: 411 SPSEVHAQVVKTNYERSSTVGTALLDAYVK 440
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 472 bits (1215), Expect = e-133, Method: Compositional matrix adjust.
Identities = 286/794 (36%), Positives = 415/794 (52%), Gaps = 89/794 (11%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF++LLK CI RD GK +HA I+ I + L N LYSK G A F
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 78 -------------------NN-------------------PNVFSYNAIIDACVKHSHLH 99
NN PN + Y A+I AC +
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 100 LAR-------------------------------------ELFDEIPRPDIVSYNTLIAA 122
+ R ++FD++ ++V++ +I
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITR 243
Query: 123 HAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCY 180
G A+R F + +G D FTLS V AC E ++ L QLH +A+ G
Sbjct: 244 CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD 303
Query: 181 ASVCNAV--LARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVA-CGQCREGKEALVLF 237
C+ V A+ G + + +VF M + +SW A+I C EA+ LF
Sbjct: 304 VE-CSLVDMYAKCSADGSVDDCRKVFDRMED--HSVMSWTALITGYMKNCNLATEAINLF 360
Query: 238 GEMVRMG-MKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSK 296
EM+ G ++ + FT +S A L D G Q G+ K G N V + +I M+ K
Sbjct: 361 SEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVK 420
Query: 297 CAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSF 356
M D + FE +SE +LV +NT + G ++ + E A ++ +F
Sbjct: 421 --SDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF-EQAFKLLSEITERELGVSAFTF 477
Query: 357 SCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP 416
+ + S +N+ S G+Q+H+ +K + N+ V NAL++MYSKCG++ A RVF+ M
Sbjct: 478 ASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQ-PVCNALISMYSKCGSIDTASRVFNFME 536
Query: 417 EHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQK 476
N +S SMITG+A+HG L+ F M++E + PN +T++++LSAC+H G V EG +
Sbjct: 537 NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWR 596
Query: 477 YFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKH 536
+FN M E I+P+ +H++CMVDLL RAG L +A I TMPF + W LGACR H
Sbjct: 597 HFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVH 656
Query: 537 GNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSW 596
N EL AA K L+L+P+ Y+ LSN+YA AG+WEES ++R M+ER + K+ GCSW
Sbjct: 657 SNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSW 716
Query: 597 IQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKER 656
I++ +K+H F D++HP +I++ + ++ ++K+ GYVPD L K E+ E ++
Sbjct: 717 IEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKE 776
Query: 657 RLLY-HSEKLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRF 715
RLLY HSEK+AVAFGLIST + P+ V KNLR+CGDCHNA+K IS +SGREI +RD +RF
Sbjct: 777 RLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRF 836
Query: 716 HCFKEGHCSCKDYW 729
H FK+G CSC DYW
Sbjct: 837 HHFKDGKCSCNDYW 850
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 161/367 (43%), Gaps = 18/367 (4%)
Query: 225 GQCREGKEALVLFGEMVRMGMK-IDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWN 283
G R AL L M R G++ +D T +S+L + D G H R+I+ +
Sbjct: 40 GDLRGAVSALDL---MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPD 96
Query: 284 PHVGSGLIDMYSKCAPRGML-DCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQ 342
+ + LI +YSK D + + D+V W+ M++ + + DA+ F
Sbjct: 97 SVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNN-GRELDAIKVFV 155
Query: 343 DMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKC 402
+ G P+D ++ V ACSN +G+ +K+ + V V +L+ M+ K
Sbjct: 156 EFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKG 215
Query: 403 GN-LHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISV 461
N +A +VFD M E N V+ MIT Q G E+++ F M+ + T SV
Sbjct: 216 ENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSV 275
Query: 462 LSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRA---GKLEEAERIIETMP 518
SACA + G K + + G+ + + +VD+ + G +++ ++ + M
Sbjct: 276 FSACAELENLSLG-KQLHSWAIRSGLVDDVE--CSLVDMYAKCSADGSVDDCRKVFDRME 332
Query: 519 FDPGSIEWAALLGACRKHGNVELAVKAANKFLQL--EPHNAVPYVMLSNMYASAGRWEES 576
D + W AL+ K N LA +A N F ++ + H + S+ + + G +
Sbjct: 333 -DHSVMSWTALITGYMK--NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 389
Query: 577 ATVKRLM 583
K+++
Sbjct: 390 RVGKQVL 396
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 462 bits (1189), Expect = e-130, Method: Compositional matrix adjust.
Identities = 266/713 (37%), Positives = 390/713 (54%), Gaps = 43/713 (6%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTN 78
FT LLK C + ++ GK +H L +K+ + +Y+KC ++ AR
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR------- 190
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
++FD +P D+VS+NT++A ++ G A+ + K
Sbjct: 191 ------------------------KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKS 226
Query: 139 AREAGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGL 196
E L T+ V+ A + + ++H +A+ G+ ++ A++ Y G
Sbjct: 227 MCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGS 286
Query: 197 LSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVL 256
L A ++F M E R+ +SWN+MI A Q KEA+++F +M+ G+K ++ L
Sbjct: 287 LETARQLFDGMLE--RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGAL 344
Query: 257 TAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPD 316
A L DL G H ++ G + N V + LI MY KC M F ++
Sbjct: 345 HACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASM--FGKLQSRT 402
Query: 317 LVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVH 376
LV WN MI GF+Q+ DAL F M+ +PD ++ V +A + LS K +H
Sbjct: 403 LVSWNAMILGFAQN-GRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIH 461
Query: 377 ALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVE 436
+ ++S + N V V ALV MY+KCG + AR +FD M E + + N+MI GY HG
Sbjct: 462 GVVMRSCLDKN-VFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFG 520
Query: 437 GESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSC 496
+L+LFE M + I PN +TF+SV+SAC+H+G VE G K F MMKE + IE H+
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA 580
Query: 497 MVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHN 556
MVDLLGRAG+L EA I MP P + A+LGAC+ H NV A KAA + +L P +
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDD 640
Query: 557 AVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMI 616
+V+L+N+Y +A WE+ V+ M +G++K PGCS ++I N+VH F + ++HP
Sbjct: 641 GGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDS 700
Query: 617 KEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKE 676
K+I+ ++ +++ +K+AGYVPD LG + DV KE+ L HSEKLA++FGL++T
Sbjct: 701 KKIYAFLEKLICHIKEAGYVPDTNLVLGVENDV----KEQLLSTHSEKLAISFGLLNTTA 756
Query: 677 GVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
G I V KNLR+C DCHNA K IS ++GREI VRD RFH FK G CSC DYW
Sbjct: 757 GTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 197/436 (45%), Gaps = 45/436 (10%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T ++L + R IS GK +H +++ +S +Y+KCG+L+ AR F
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM 297
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
NV S+N++IDA V+ +E P+ A+ +F+
Sbjct: 298 LERNVVSWNSMIDAYVQ-----------NENPK--------------------EAMLIFQ 326
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQ---LHCFAVLCGYSCYASVCNAVLARYGGR 194
+ + G+ ++ G + AC D+G + + +H +V G SV N++++ Y
Sbjct: 327 KMLDEGVKPTDVSVMGALHAC-ADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKC 385
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
+ A +F ++ R +SWNAMI+ Q +AL F +M +K D FT S
Sbjct: 386 KEVDTAASMFGKLQS--RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVS 443
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISE 314
V+TA L HG +++S + N V + L+DMY+KC ++ +F+ +SE
Sbjct: 444 VITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCG--AIMIARLIFDMMSE 501
Query: 315 PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQ 374
+ WN MI G+ H + AL F++MQ+ +P+ +F V SACS+ G +
Sbjct: 502 RHVTTWNAMIDGYGTH-GFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLK 560
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQ-- 432
+ ++ + A+V + + G L++A MP V++ + G Q
Sbjct: 561 CFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIH 620
Query: 433 ---HGVEGESLQLFEL 445
+ E + +LFEL
Sbjct: 621 KNVNFAEKAAERLFEL 636
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 145/276 (52%), Gaps = 6/276 (2%)
Query: 275 MIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLS 334
+ K+G + L+ ++ C + + +VFE I VL++TM+ GF++ DL
Sbjct: 60 VFKNGLYQEHFFQTKLVSLF--CRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDL- 116
Query: 335 EDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNA 394
+ AL F M+ P +F+ + C + + +GK++H L +KS + ++
Sbjct: 117 DKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM-TG 175
Query: 395 LVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPN 454
L MY+KC +++AR+VFD MPE + VS N+++ GY+Q+G+ +L++ + M +E++ P+
Sbjct: 176 LENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPS 235
Query: 455 NITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERII 514
IT +SVL A + + G K + + G + + +VD+ + G LE A ++
Sbjct: 236 FITIVSVLPAVSALRLISVG-KEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLF 294
Query: 515 ETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFL 550
+ M + + W +++ A ++ N + A+ K L
Sbjct: 295 DGM-LERNVVSWNSMIDAYVQNENPKEAMLIFQKML 329
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 461 bits (1186), Expect = e-130, Method: Compositional matrix adjust.
Identities = 255/678 (37%), Positives = 393/678 (57%), Gaps = 29/678 (4%)
Query: 69 NARTSFRLTNNPNVFSYNAIIDAC--------------VKHSHLHLARELFDEIPRPDIV 114
+A + FR V A++D C K + AR++FD +P D +
Sbjct: 127 SAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTI 186
Query: 115 SYNTLIAAHAHRGEHGPAVRLFKE-AREAGLCLDGFTLSGVIKACRE--DVGLVMQLHCF 171
+NT+I+ + + ++++F++ E+ LD TL ++ A E ++ L MQ+H
Sbjct: 187 LWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSL 246
Query: 172 AVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGK 231
A G + V ++ Y G + +F E + D +++NAMI E +
Sbjct: 247 ATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKP--DIVAYNAMIHGYTSNGETE 304
Query: 232 EALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLI 291
+L LF E++ G ++ T+ S++ L + HG +KS F + V + L
Sbjct: 305 LSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA---IHGYCLKSNFLSHASVSTALT 361
Query: 292 DMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRP 351
+YSK + K+F+E E L WN MISG++Q+ L+EDA+ F++MQ++ F P
Sbjct: 362 TVYSKL--NEIESARKLFDESPEKSLPSWNAMISGYTQN-GLTEDAISLFREMQKSEFSP 418
Query: 352 DDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRV 411
+ + +C+ SAC+ L + SLGK VH L +D S+ + V+ AL+ MY+KCG++ +ARR+
Sbjct: 419 NPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS-IYVSTALIGMYAKCGSIAEARRL 477
Query: 412 FDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKV 471
FD M + N V+ N+MI+GY HG E+L +F M+ I P +TF+ VL AC+H G V
Sbjct: 478 FDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLV 537
Query: 472 EEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLG 531
+EG + FN M ++G EP KH++CMVD+LGRAG L+ A + IE M +PGS W LLG
Sbjct: 538 KEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLG 597
Query: 532 ACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKK 591
ACR H + LA + K +L+P N +V+LSN++++ + ++ATV++ ++R + K
Sbjct: 598 ACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKA 657
Query: 592 PGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAA 651
PG + I+I HVF + D SHP +KEI+E + ++ KM++AGY P+ AL DV
Sbjct: 658 PGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELAL---HDVEE 714
Query: 652 EEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRD 711
EE+E + HSE+LA+AFGLI+T+ G I ++KNLR+C DCH KLIS I+ R I VRD
Sbjct: 715 EERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRD 774
Query: 712 AHRFHCFKEGHCSCKDYW 729
A+RFH FK+G CSC DYW
Sbjct: 775 ANRFHHFKDGVCSCGDYW 792
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/479 (26%), Positives = 231/479 (48%), Gaps = 24/479 (5%)
Query: 98 LHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREA-GLCLDGFTLSGVIK 156
++ AR++F + RPD+ +N L+ + ++ +F R++ L + T + I
Sbjct: 68 IYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAIS 127
Query: 157 AC---RED-VGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCR 212
A R+D G V +H AV+ G + + ++ Y + +A +VF M E +
Sbjct: 128 AASGFRDDRAGRV--IHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPE--K 183
Query: 213 DEISWNAMIVACGQCREGKEALVLFGEMVRMG-MKIDMFTMASVLTAFTCLEDLAGGMQF 271
D I WN MI + E++ +F +++ ++D T+ +L A L++L GMQ
Sbjct: 184 DTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQI 243
Query: 272 HGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHE 331
H K+G + +V +G I +YSKC M + F E +PD+V +N MI G++ +
Sbjct: 244 HSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSAL--FREFRKPDIVAYNAMIHGYTSNG 301
Query: 332 DLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSV 391
+ +E +L F+++ +G R + + +L L +H +KS+ S+ SV
Sbjct: 302 E-TELSLSLFKELMLSGARLRSSTLVSLVPVSGHL---MLIYAIHGYCLKSNFLSH-ASV 356
Query: 392 NNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDI 451
+ AL +YSK + AR++FD PE + S N+MI+GY Q+G+ +++ LF M + +
Sbjct: 357 STALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEF 416
Query: 452 VPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAE 511
PN +T +LSACA G + G+ ++++ E + ++ + + G + EA
Sbjct: 417 SPNPVTITCILSACAQLGALSLGKWVHDLVRST-DFESSIYVSTALIGMYAKCGSIAEAR 475
Query: 512 RIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ--LEPHNAVPYVMLSNMYA 568
R+ + M + W ++ HG + A+ + L + P P L +YA
Sbjct: 476 RLFDLMT-KKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITP---TPVTFLCVLYA 530
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 170/398 (42%), Gaps = 37/398 (9%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T ++L +++ G +H+L KT Y+ F LYSKCG + FR
Sbjct: 223 TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREF 282
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
P++ +YNA +I + GE ++ LFK
Sbjct: 283 RKPDIVAYNA-------------------------------MIHGYTSNGETELSLSLFK 311
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLL 197
E +G L TL ++ + L+ +H + + + +ASV A+ Y +
Sbjct: 312 ELMLSGARLRSSTLVSLVPVSGH-LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEI 370
Query: 198 SEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLT 257
A ++F E E + SWNAMI Q ++A+ LF EM + + T+ +L+
Sbjct: 371 ESARKLFDESPE--KSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILS 428
Query: 258 AFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDL 317
A L L+ G H + + F + +V + LI MY+KC + + ++F+ +++ +
Sbjct: 429 ACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCG--SIAEARRLFDLMTKKNE 486
Query: 318 VLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHA 377
V WNTMISG+ H ++AL F +M +G P +F CV ACS+ G ++
Sbjct: 487 VTWNTMISGYGLHGQ-GQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFN 545
Query: 378 LAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTM 415
I V +V + + G+L A + + M
Sbjct: 546 SMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAM 583
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/469 (23%), Positives = 192/469 (40%), Gaps = 56/469 (11%)
Query: 167 QLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQ 226
Q H +L G+ S+ + R G + A +F + D +N ++
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRP--DVFLFNVLMRGFSV 95
Query: 227 CREGKEALVLFGEMVR-MGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPH 285
+L +F + + +K + T A ++A + D G HG+ + G +
Sbjct: 96 NESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELL 155
Query: 286 VGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDM- 344
+GS ++ MY K + D KVF+ + E D +LWNTMISG+ ++E + +++ F+D+
Sbjct: 156 LGSNIVKMYFKFWR--VEDARKVFDRMPEKDTILWNTMISGYRKNE-MYVESIQVFRDLI 212
Query: 345 QRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGN 404
+ R D + + A + L LG Q+H+LA K+ S+ V +++YSKCG
Sbjct: 213 NESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY-VLTGFISLYSKCGK 271
Query: 405 LHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSA 464
+ +F + + V+ N+MI GY +G SL LF+ +M + T +S++
Sbjct: 272 IKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPV 331
Query: 465 CAH--------------------------------TGKVEEGQKYFNMMKEKFGIEPEAK 492
H ++E +K F+ EK
Sbjct: 332 SGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEK-----SLP 386
Query: 493 HFSCMVDLLGRAGKLEEAERIIETMP---FDPGSIEWAALLGACRKHGNVELAVKAANKF 549
++ M+ + G E+A + M F P + +L AC + G + L K +
Sbjct: 387 SWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG-KWVHDL 445
Query: 550 LQLEPHNAVPYV--MLSNMYASAGRWEESATVKRLMRERGVKKKPGCSW 596
++ + YV L MYA G E+ + LM KK +W
Sbjct: 446 VRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM-----TKKNEVTW 489
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 457 bits (1176), Expect = e-128, Method: Compositional matrix adjust.
Identities = 262/668 (39%), Positives = 395/668 (59%), Gaps = 31/668 (4%)
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
N F N ++ K L ++ L D+V++NT++++ + A+ +E
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
Query: 141 EAGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYAS-VCNAVLARYGGRGLL 197
G+ D FT+S V+ AC E + +LH +A+ G S V +A++ Y +
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354
Query: 198 SEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLF-GEMVRMGMKIDMFTMASVL 256
RVF M + R WNAMI Q KEAL+LF G G+ + TMA V+
Sbjct: 355 LSGRRVFDGMFD--RKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVV 412
Query: 257 TAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD-CMKVFEEISEP 315
A + HG ++K G + + V + L+DMYS+ G +D M++F ++ +
Sbjct: 413 PACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL---GKIDIAMRIFGKMEDR 469
Query: 316 DLVLWNTMISG--FSQHEDLSEDALICFQDMQ-----------RAGFRPDDCSFSCVTSA 362
DLV WNTMI+G FS+H EDAL+ MQ R +P+ + + +
Sbjct: 470 DLVTWNTMITGYVFSEHH---EDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPS 526
Query: 363 CSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVS 422
C+ LS+ + GK++HA AIK+++ ++ V+V +ALV MY+KCG L +R+VFD +P+ N ++
Sbjct: 527 CAALSALAKGKEIHAYAIKNNLATD-VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 585
Query: 423 LNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMK 482
N +I Y HG E++ L +MM + + PN +TFISV +AC+H+G V+EG + F +MK
Sbjct: 586 WNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
Query: 483 EKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSI-EWAALLGACRKHGNVEL 541
+G+EP + H++C+VDLLGRAG+++EA +++ MP D W++LLGA R H N+E+
Sbjct: 646 PDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEI 705
Query: 542 AVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDN 601
AA +QLEP+ A YV+L+N+Y+SAG W+++ V+R M+E+GV+K+PGCSWI+ +
Sbjct: 706 GEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGD 765
Query: 602 KVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYH 661
+VH FVA DSSHP +++ Y+ + +M++ GYVPD L +V +EKE L H
Sbjct: 766 EVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVL---HNVEEDEKEILLCGH 822
Query: 662 SEKLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEG 721
SEKLA+AFG+++T G I V KNLR+C DCH A K IS I REI +RD RFH FK G
Sbjct: 823 SEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNG 882
Query: 722 HCSCKDYW 729
CSC DYW
Sbjct: 883 TCSCGDYW 890
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 151/544 (27%), Positives = 258/544 (47%), Gaps = 59/544 (10%)
Query: 19 FTNLLKQCISQRDISTGKSLHA-LYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
F LLK +D+ GK +HA +Y + S ++N LY KCG
Sbjct: 100 FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG------------ 147
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+ A+ ++FD I + VS+N+LI++ + A+ F+
Sbjct: 148 ------DFGAVY-------------KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFR 188
Query: 138 EAREAGLCLDGFTLSGVIKACRE---DVGLVM--QLHCFAVLCGYSCYASVCNAVLARYG 192
+ + FTL V+ AC GL+M Q+H + + G + + N ++A YG
Sbjct: 189 CMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYG 247
Query: 193 GRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTM 252
G L+ + + G RD ++WN ++ + Q + EAL EMV G++ D FT+
Sbjct: 248 KLGKLASSKVLLGSF--GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTI 305
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSG-FNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEE 311
+SVL A + LE L G + H +K+G + N VGS L+DMY C + +L +VF+
Sbjct: 306 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC--KQVLSGRRVFDG 363
Query: 312 ISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQR-AGFRPDDCSFSCVTSACSNLSSPS 370
+ + + LWN MI+G+SQ+E ++AL+ F M+ AG + + + V AC + S
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEH-DKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFS 422
Query: 371 LGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGY 430
+ +H +K + +R V N L+ MYS+ G + A R+F M + + V+ N+MITGY
Sbjct: 423 RKEAIHGFVVKRGLDRDRF-VQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGY 481
Query: 431 AQHGVEGESLQLFELMMQED-----------IVPNNITFISVLSACAHTGKVEEGQKYFN 479
++L L M + + PN+IT +++L +CA + +G K +
Sbjct: 482 VFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG-KEIH 540
Query: 480 MMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNV 539
K + + S +VD+ + G L+ + ++ + +P I W ++ A HGN
Sbjct: 541 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGNG 599
Query: 540 ELAV 543
+ A+
Sbjct: 600 QEAI 603
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 194/397 (48%), Gaps = 19/397 (4%)
Query: 143 GLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSC-YASVCNAVLARYGGRGLLSE 199
G+ D + ++KA +D+ L Q+H GY +V N ++ Y G
Sbjct: 92 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 151
Query: 200 AWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAF 259
++VF + E R+++SWN++I + + + AL F M+ ++ FT+ SV+TA
Sbjct: 152 VYKVFDRISE--RNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTAC 209
Query: 260 TCL---EDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKV-FEEISEP 315
+ L E L G Q H ++ G N + + L+ MY K G L KV
Sbjct: 210 SNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKL---GKLASSKVLLGSFGGR 265
Query: 316 DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQV 375
DLV WNT++S Q+E L E AL ++M G PD+ + S V ACS+L GK++
Sbjct: 266 DLVTWNTVLSSLCQNEQLLE-ALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
Query: 376 HALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGV 435
HA A+K+ V +ALV MY C + RRVFD M + N+MI GY+Q+
Sbjct: 325 HAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH 384
Query: 436 EGESLQLFELMMQED--IVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKH 493
+ E+L LF + M+E ++ N+ T V+ AC +G + + ++ G++ +
Sbjct: 385 DKEALLLF-IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR-GLDRDRFV 442
Query: 494 FSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALL 530
+ ++D+ R GK++ A RI M D + W ++
Sbjct: 443 QNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMI 478
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 153/307 (49%), Gaps = 12/307 (3%)
Query: 231 KEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNP-HVGSG 289
+EA++ + +M+ +G+K D + ++L A L+D+ G Q H + K G+ + V +
Sbjct: 79 REAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANT 138
Query: 290 LIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGF 349
L+++Y KC G + KVF+ ISE + V WN++IS E E AL F+ M
Sbjct: 139 LVNLYRKCGDFGAV--YKVFDRISERNQVSWNSLISSLCSFEKW-EMALEAFRCMLDENV 195
Query: 350 RPDDCSFSCVTSACSNLSSPS---LGKQVHALAI-KSDIPSNRVSVNNALVAMYSKCGNL 405
P + V +ACSNL P +GKQVHA + K ++ S + N LVAMY K G L
Sbjct: 196 EPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS---FIINTLVAMYGKLGKL 252
Query: 406 HDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSAC 465
++ + + + V+ N++++ Q+ E+L+ M+ E + P+ T SVL AC
Sbjct: 253 ASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPAC 312
Query: 466 AHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIE 525
+H + G++ + ++ + S +VD+ ++ R+ + M FD
Sbjct: 313 SHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKIGL 371
Query: 526 WAALLGA 532
W A++
Sbjct: 372 WNAMIAG 378
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 103/189 (54%), Gaps = 11/189 (5%)
Query: 332 DLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSV 391
+L +A++ + DM G +PD+ +F + A ++L LGKQ+HA K + V+V
Sbjct: 76 NLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTV 135
Query: 392 NNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDI 451
N LV +Y KCG+ +VFD + E N VS NS+I+ +L+ F M+ E++
Sbjct: 136 ANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENV 195
Query: 452 VPNNITFISVLSACAHTGKVEEGQKYFNMMKEK---FGIEP-EAKHF--SCMVDLLGRAG 505
P++ T +SV++AC++ + EG MM ++ +G+ E F + +V + G+ G
Sbjct: 196 EPSSFTLVSVVTACSNL-PMPEGL----MMGKQVHAYGLRKGELNSFIINTLVAMYGKLG 250
Query: 506 KLEEAERII 514
KL ++ ++
Sbjct: 251 KLASSKVLL 259
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 4/123 (3%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T +L C + ++ GK +HA IK + + + +Y+KCG L +R F
Sbjct: 519 TLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQI 578
Query: 78 NNPNVFSYNAIIDACVKHSH----LHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAV 133
NV ++N II A H + + L R + + +P+ V++ ++ AA +H G +
Sbjct: 579 PQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGL 638
Query: 134 RLF 136
R+F
Sbjct: 639 RIF 641
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 456 bits (1174), Expect = e-128, Method: Compositional matrix adjust.
Identities = 260/698 (37%), Positives = 389/698 (55%), Gaps = 75/698 (10%)
Query: 101 ARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACRE 160
A + IP P I S+++LI A ++ +F GL D L + K C E
Sbjct: 69 ADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAE 128
Query: 161 DVGLVM--QLHCFAVLCGYSCYASV-------------------------------CNAV 187
+ Q+HC + + G A V C+A+
Sbjct: 129 LSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSAL 188
Query: 188 LARYGGRGLLSEAWRVFHEM-GEGCRDEI-SWNAMIVACGQCREGKEALVLFGEMVRMGM 245
L Y +G L E R+ EM G I SWN ++ + KEA+V+F ++ +G
Sbjct: 189 LCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGF 248
Query: 246 KIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKC-------- 297
D T++SVL + E L G HG +IK G + V S +IDMY K
Sbjct: 249 CPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIIS 308
Query: 298 --------------------APRGMLD-CMKVFE----EISEPDLVLWNTMISGFSQH-E 331
+ G++D +++FE + E ++V W ++I+G +Q+ +
Sbjct: 309 LFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGK 368
Query: 332 DLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSV 391
D+ +AL F++MQ AG +P+ + + AC N+++ G+ H A++ + N V V
Sbjct: 369 DI--EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDN-VHV 425
Query: 392 NNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDI 451
+AL+ MY+KCG ++ ++ VF+ MP N V NS++ G++ HG E + +FE +M+ +
Sbjct: 426 GSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRL 485
Query: 452 VPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAE 511
P+ I+F S+LSAC G +EG KYF MM E++GI+P +H+SCMV+LLGRAGKL+EA
Sbjct: 486 KPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAY 545
Query: 512 RIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAG 571
+I+ MPF+P S W ALL +CR NV+LA AA K LEP N YV+LSN+YA+ G
Sbjct: 546 DLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKG 605
Query: 572 RWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMK 631
W E +++ M G+KK PGCSWIQ+ N+V+ +A D SHP I +I E M E+ ++M+
Sbjct: 606 MWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMR 665
Query: 632 QAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLRICGD 691
++G+ P++ +AL DV +E+E+ L HSEKLAV FGL++T +G P+ V+KNLRICGD
Sbjct: 666 KSGHRPNLDFAL---HDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGD 722
Query: 692 CHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
CH IK IS+ +GREI +RD +RFH FK+G CSC D+W
Sbjct: 723 CHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 189/438 (43%), Gaps = 42/438 (9%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
NL K C GK +H + + + ++ +Y +CG + +AR F
Sbjct: 118 VLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRM 177
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIP----RPDIVSYNTLIAAHAHRGEHGPAV 133
++ +V + +A++ A + L + E+ +IVS+N +++ G H AV
Sbjct: 178 SDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAV 237
Query: 134 RLFKEAREAGLCLDGFTLSGVIKACREDVGLVM--------------------------- 166
+F++ G C D T+S V+ + + L M
Sbjct: 238 VMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMY 297
Query: 167 --QLHCFAVLCGYSCY----ASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRD--EISWN 218
H + ++ ++ + A VCNA + GL+ +A +F E + +SW
Sbjct: 298 GKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWT 357
Query: 219 AMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKS 278
++I C Q + EAL LF EM G+K + T+ S+L A + L G HG ++
Sbjct: 358 SIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRV 417
Query: 279 GFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDAL 338
N HVGS LIDMY+KC + VF + +LV WN++++GFS H +++ +
Sbjct: 418 HLLDNVHVGSALIDMYAKCGRINLSQI--VFNMMPTKNLVCWNSLMNGFSMHGK-AKEVM 474
Query: 339 ICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAM 398
F+ + R +PD SF+ + SAC + G + + + R+ + +V +
Sbjct: 475 SIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNL 534
Query: 399 YSKCGNLHDARRVFDTMP 416
+ G L +A + MP
Sbjct: 535 LGRAGKLQEAYDLIKEMP 552
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 134/288 (46%), Gaps = 10/288 (3%)
Query: 270 QFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQ 329
Q H R++KSG + ++ + LI YS D V + I +P + ++++I ++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNY--NCFNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 330 HEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRV 389
+ L ++ F M G PD + C+ LS+ +GKQ+H ++ S + +
Sbjct: 94 AK-LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 390 SVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQE 449
V ++ MY +CG + DAR+VFD M + + V+ ++++ YA+ G E +++ M
Sbjct: 153 -VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 450 DIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEE 509
I N +++ +LS +G +E F + G P+ S ++ +G + L
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKI-HHLGFCPDQVTVSSVLPSVGDSEMLNM 270
Query: 510 AERIIETMPFDPGSIE----WAALLGACRKHGNVELAVKAANKFLQLE 553
R+I G ++ +A++ K G+V + N+F +E
Sbjct: 271 G-RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMME 317
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 146/331 (44%), Gaps = 16/331 (4%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T +++L ++ G+ +H IK + + + +Y K G + + F
Sbjct: 254 TVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQF 313
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFD----EIPRPDIVSYNTLIAAHAHRGEHGPAV 133
NA I ++ + A E+F+ + ++VS+ ++IA A G+ A+
Sbjct: 314 EMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEAL 373
Query: 134 RLFKEAREAGLCLDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARY 191
LF+E + AG+ + T+ ++ AC +G H FAV V +A++ Y
Sbjct: 374 ELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMY 433
Query: 192 GGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFT 251
G ++ + VF+ M ++ + WN+++ + KE + +F ++R +K D +
Sbjct: 434 AKCGRINLSQIVFNMM--PTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFIS 491
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVG--SGLIDMYSKCAPRGMLDCMKVF 309
S+L+A + G ++ +M+ + P + S ++++ + + + +
Sbjct: 492 FTSLLSACGQVGLTDEGWKYF-KMMSEEYGIKPRLEHYSCMVNLLGRAGK--LQEAYDLI 548
Query: 310 EEIS-EPDLVLWNTMISG--FSQHEDLSEDA 337
+E+ EPD +W +++ + DL+E A
Sbjct: 549 KEMPFEPDSCVWGALLNSCRLQNNVDLAEIA 579
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 455 bits (1170), Expect = e-128, Method: Compositional matrix adjust.
Identities = 265/765 (34%), Positives = 403/765 (52%), Gaps = 96/765 (12%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF + K C + G+S HAL + T + ++ N +YS+C +L +AR F
Sbjct: 129 TFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM 188
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIP-----RPDIVSYNTLIAAHAHRGEHGPA 132
+ +V S+N+II++ K +A E+F + RPD ++ ++ A G H
Sbjct: 189 SVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTH--- 245
Query: 133 VRLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYG 192
L QLHCFAV V N ++ Y
Sbjct: 246 ------------------------------SLGKQLHCFAVTSEMIQNMFVGNCLVDMYA 275
Query: 193 GRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTM 252
G++ EA VF M +D +SWNAM+ Q ++A+ LF +M +K+D+ T
Sbjct: 276 KCGMMDEANTVFSNM--SVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTW 333
Query: 253 ASVLTAF-----------TCLEDLAGGMQ-------------------FHGRMI------ 276
++ ++ + C + L+ G++ HG+ I
Sbjct: 334 SAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK 393
Query: 277 ------KSGFNWNPHVGSGLIDMYSKC----APRGMLDCMKVFEEISEPDLVLWNTMISG 326
K+G V + LIDMY+KC R M D + E D+V W MI G
Sbjct: 394 YPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSP----KERDVVTWTVMIGG 449
Query: 327 FSQHEDLSEDALICFQDM--QRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDI 384
+SQH D + AL +M + RP+ + SC AC++L++ +GKQ+HA A+++
Sbjct: 450 YSQHGD-ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQ 508
Query: 385 PSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFE 444
+ + V+N L+ MY+KCG++ DAR VFD M N V+ S++TGY HG E+L +F+
Sbjct: 509 NAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFD 568
Query: 445 LMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRA 504
M + + +T + VL AC+H+G +++G +YFN MK FG+ P +H++C+VDLLGRA
Sbjct: 569 EMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRA 628
Query: 505 GKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLS 564
G+L A R+IE MP +P + W A L CR HG VEL AA K +L ++ Y +LS
Sbjct: 629 GRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLS 688
Query: 565 NMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMG 624
N+YA+AGRW++ ++ LMR +GVKK+PGCSW++ F D +HP KEI++ +
Sbjct: 689 NLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLL 748
Query: 625 EMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVK 684
+ ++++K GYVP+ +AL DV EEK+ L HSEKLA+A+G+++T +G I + K
Sbjct: 749 DHMQRIKDIGYVPETGFAL---HDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITK 805
Query: 685 NLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
NLR+CGDCH A +S I +I +RD+ RFH FK G CSCK YW
Sbjct: 806 NLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 224/506 (44%), Gaps = 67/506 (13%)
Query: 91 ACVKHSHLHLARELFDEIPRPD--IVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDG 148
C+ H A L P D + +N+LI ++ G + LF D
Sbjct: 73 GCLSH-----AVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDN 127
Query: 149 FTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHE 206
+T V KAC E V H +++ G+ V NA++A Y LS+A +VF E
Sbjct: 128 YTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDE 187
Query: 207 MGEGCRDEISWNAMIVACGQCREGKEALVLFGEMV-RMGMKIDMFTMASVLTAFTCLEDL 265
M D +SWN++I + + + K AL +F M G + D T+ +VL L
Sbjct: 188 M--SVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTH 245
Query: 266 AGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD-CMKVFEEISEPDLVLWNTMI 324
+ G Q H + S N VG+ L+DMY+KC GM+D VF +S D+V WN M+
Sbjct: 246 SLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC---GMMDEANTVFSNMSVKDVVSWNAMV 302
Query: 325 SGFSQHEDLSEDALICFQDMQR-----------------------------------AGF 349
+G+SQ EDA+ F+ MQ +G
Sbjct: 303 AGYSQIGRF-EDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGI 361
Query: 350 RPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIP------SNRVSVNNALVAMYSKCG 403
+P++ + V S C+++ + GK++H AIK I + V N L+ MY+KC
Sbjct: 362 KPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCK 421
Query: 404 NLHDARRVFDTMP--EHNTVSLNSMITGYAQHGVEGESLQLFELMMQED--IVPNNITFI 459
+ AR +FD++ E + V+ MI GY+QHG ++L+L M +ED PN T
Sbjct: 422 KVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTIS 481
Query: 460 SVLSACAHTGKVEEGQKY--FNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETM 517
L ACA + G++ + + ++ + + C++D+ + G + +A + + M
Sbjct: 482 CALVACASLAALRIGKQIHAYALRNQQNAVPLFVSN--CLIDMYAKCGSISDARLVFDNM 539
Query: 518 PFDPGSIEWAALLGACRKHGNVELAV 543
+ W +L+ HG E A+
Sbjct: 540 -MAKNEVTWTSLMTGYGMHGYGEEAL 564
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 192/409 (46%), Gaps = 54/409 (13%)
Query: 187 VLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMK 246
+++ Y G LS A + WN++I + G + L LFG M +
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 247 IDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCM 306
D +T V A + + G H + +GF N VG+ L+ MYS+C R + D
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRC--RSLSDAR 182
Query: 307 KVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRA-GFRPDDCSFSCVTSACSN 365
KVF+E+S D+V WN++I +++ + AL F M G RPD+ + V C++
Sbjct: 183 KVFDEMSVWDVVSWNSIIESYAKLGK-PKVALEMFSRMTNEFGCRPDNITLVNVLPPCAS 241
Query: 366 LSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNS 425
L + SLGKQ+H A+ S++ N + V N LV MY+KCG + +A VF M + VS N+
Sbjct: 242 LGTHSLGKQLHCFAVTSEMIQN-MFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300
Query: 426 MITGYAQHGVEGESLQLFELMMQE----DIV----------------------------- 452
M+ GY+Q G ++++LFE M +E D+V
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 453 --PNNITFISVLSACAHTGKVEEGQKY------FNMMKEKFGIEPEAKHFSCMVDLLGRA 504
PN +T ISVLS CA G + G++ + + K G E + ++D+ +
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420
Query: 505 GKLEEAERIIETM-PFDPGSIEWAALLGACRKHGNVELAVKAANKFLQL 552
K++ A + +++ P + + W ++G +HG+ ANK L+L
Sbjct: 421 KKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGD-------ANKALEL 462
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 453 bits (1166), Expect = e-127, Method: Compositional matrix adjust.
Identities = 251/661 (37%), Positives = 372/661 (56%), Gaps = 43/661 (6%)
Query: 105 FDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACRE--DV 162
F + P ++++ ++I + A+ F E R +G C D V+K+C D+
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 163 GLVMQLHCFAVLCGYSCYASVCNAVLARYG---GRGLLSEAWRVFHEM------------ 207
+H F V G C NA++ Y G G VF EM
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 208 -GEGC------------------RDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKID 248
E C +D +S+N +I Q ++AL + EM +K D
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 249 MFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKV 308
FT++SVL F+ D+ G + HG +I+ G + + ++GS L+DMY+K A + D +V
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSAR--IEDSERV 299
Query: 309 FEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSS 368
F + D + WN++++G+ Q+ +E AL F+ M A +P +FS V AC++L++
Sbjct: 300 FSRLYCRDGISWNSLVAGYVQNGRYNE-ALRLFRQMVTAKVKPGAVAFSSVIPACAHLAT 358
Query: 369 PSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMIT 428
LGKQ+H ++ SN + + +ALV MYSKCGN+ AR++FD M + VS ++I
Sbjct: 359 LHLGKQLHGYVLRGGFGSN-IFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIM 417
Query: 429 GYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIE 488
G+A HG E++ LFE M ++ + PN + F++VL+AC+H G V+E YFN M + +G+
Sbjct: 418 GHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLN 477
Query: 489 PEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANK 548
E +H++ + DLLGRAGKLEEA I M +P W+ LL +C H N+ELA K A K
Sbjct: 478 QELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEK 537
Query: 549 FLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVA 608
++ N YV++ NMYAS GRW+E A ++ MR++G++KKP CSWI++ NK H FV+
Sbjct: 538 IFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVS 597
Query: 609 EDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVA 668
D SHP + +I+E++ ++ +M++ GYV D L DV E K L HSE+LAVA
Sbjct: 598 GDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVL---HDVDEEHKRELLFGHSERLAVA 654
Query: 669 FGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDY 728
FG+I+T+ G I V KN+RIC DCH AIK IS I+ REI VRD RFH F G+CSC DY
Sbjct: 655 FGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDY 714
Query: 729 W 729
W
Sbjct: 715 W 715
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKC---GTLDNARTSF 74
F ++LK C D+ G+S+H ++ + Y N +Y+K G+ + F
Sbjct: 107 VFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVF 166
Query: 75 -----RLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEH 129
R +N+ + + + C+ + R +F+ +PR D+VSYNT+IA +A G +
Sbjct: 167 DEMPQRTSNSGD---EDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMY 223
Query: 130 GPAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLV--MQLHCFAVLCGYSCYASVCNAV 187
A+R+ +E L D FTLS V+ E V ++ ++H + + G + +++
Sbjct: 224 EDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSL 283
Query: 188 LARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKI 247
+ Y + ++ RVF + CRD ISWN+++ Q EAL LF +MV +K
Sbjct: 284 VDMYAKSARIEDSERVFSRL--YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKP 341
Query: 248 DMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKC----APRGML 303
+SV+ A L L G Q HG +++ GF N + S L+DMYSKC A R +
Sbjct: 342 GAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIF 401
Query: 304 DCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSAC 363
D M V +E+S W +I G + H +A+ F++M+R G +P+ +F V +AC
Sbjct: 402 DRMNVLDEVS------WTAIIMGHALHGH-GHEAVSLFEEMKRQGVKPNQVAFVAVLTAC 454
Query: 364 SNL 366
S++
Sbjct: 455 SHV 457
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 453 bits (1165), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/650 (36%), Positives = 370/650 (56%), Gaps = 12/650 (1%)
Query: 83 FSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREA 142
F +I A + AR++FD++PRP I +N +I ++ A+ ++ + A
Sbjct: 54 FLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLA 113
Query: 143 GLCLDGFTLSGVIKACREDVGLVMQ--LHCFAVLCGYSCYASVCNAVLARYGGRGLLSEA 200
+ D FT ++KAC L M +H G+ V N ++A Y L A
Sbjct: 114 RVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSA 173
Query: 201 WRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFT 260
VF + R +SW A++ A Q E EAL +F +M +M +K D + SVL AFT
Sbjct: 174 RTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFT 233
Query: 261 CLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKV-FEEISEPDLVL 319
CL+DL G H ++K G P + L MY+KC G + K+ F+++ P+L+L
Sbjct: 234 CLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKC---GQVATAKILFDKMKSPNLIL 290
Query: 320 WNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALA 379
WN MISG++++ + +A+ F +M RPD S + SAC+ + S + ++
Sbjct: 291 WNAMISGYAKN-GYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349
Query: 380 IKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGES 439
+SD + V +++AL+ M++KCG++ AR VFD + + V ++MI GY HG E+
Sbjct: 350 GRSDYRDD-VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREA 408
Query: 440 LQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVD 499
+ L+ M + + PN++TF+ +L AC H+G V EG +FN M + I P+ +H++C++D
Sbjct: 409 ISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADH-KINPQQQHYACVID 467
Query: 500 LLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVP 559
LLGRAG L++A +I+ MP PG W ALL AC+KH +VEL AA + ++P N
Sbjct: 468 LLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGH 527
Query: 560 YVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEI 619
YV LSN+YA+A W+ A V+ M+E+G+ K GCSW+++ ++ F D SHP +EI
Sbjct: 528 YVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEI 587
Query: 620 HEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVP 679
+ + ++K+ G+V + +L D+ EE E L HSE++A+A+GLIST +G P
Sbjct: 588 ERQVEWIESRLKEGGFVANKDASL---HDLNDEEAEETLCSHSERIAIAYGLISTPQGTP 644
Query: 680 ILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
+ + KNLR C +CH A KLIS + REI VRD +RFH FK+G CSC DYW
Sbjct: 645 LRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 162/353 (45%), Gaps = 42/353 (11%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF +LLK C + G+ +HA + ++ N LY+KC L +ART
Sbjct: 121 TFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSART----- 175
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPD--IVSYNTLIAAHAHRGEHGPAVRL 135
+F+ +P P+ IVS+ +++A+A GE A+ +
Sbjct: 176 --------------------------VFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEI 209
Query: 136 FKEAREAGLCLDGFTLSGVIKA--CREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGG 193
F + R+ + D L V+ A C +D+ +H V G + ++ Y
Sbjct: 210 FSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAK 269
Query: 194 RGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMA 253
G ++ A +F +M + I WNAMI + +EA+ +F EM+ ++ D ++
Sbjct: 270 CGQVATAKILFDKMKSP--NLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 254 SVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMK-VFEEI 312
S ++A + L + + +S + + + S LIDM++KC G ++ + VF+
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC---GSVEGARLVFDRT 384
Query: 313 SEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSN 365
+ D+V+W+ MI G+ H + +A+ ++ M+R G P+D +F + AC++
Sbjct: 385 LDRDVVVWSAMIVGYGLH-GRAREAISLYRAMERGGVHPNDVTFLGLLMACNH 436
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 127/310 (40%), Gaps = 48/310 (15%)
Query: 30 RDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAII 89
+D+ G+S+HA +K + L +Y+KCG + A+ F +PN+ +NA+I
Sbjct: 236 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 295
Query: 90 DACVKHSHLHLARELFDEI----PRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLC 145
K+ + A ++F E+ RPD +S + I+A A G A +++ +
Sbjct: 296 SGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDY- 354
Query: 146 LDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFH 205
R+DV + +A++ + G + A VF
Sbjct: 355 -------------RDDV-------------------FISSALIDMFAKCGSVEGARLVFD 382
Query: 206 EMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDL 265
+ RD + W+AMIV G +EA+ L+ M R G+ + T +L A +
Sbjct: 383 RTLD--RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMV 440
Query: 266 AGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEIS----EPDLVLWN 321
G F RM N + +ID+ + G LD + +E I +P + +W
Sbjct: 441 REGWWFFNRMADHKINPQQQHYACVIDLLGRA---GHLD--QAYEVIKCMPVQPGVTVWG 495
Query: 322 TMISGFSQHE 331
++S +H
Sbjct: 496 ALLSACKKHR 505
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 453 bits (1165), Expect = e-127, Method: Compositional matrix adjust.
Identities = 269/652 (41%), Positives = 385/652 (59%), Gaps = 17/652 (2%)
Query: 86 NAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLC 145
N +++ K + AR +F + D VS+N++I G AV +K R +
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL 412
Query: 146 LDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRV 203
FTL + +C + L Q+H ++ G SV NA++ Y G L+E ++
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 472
Query: 204 FHEMGEGCRDEISWNAMIVACGQC-REGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCL 262
F M E D++SWN++I A + R EA+V F R G K++ T +SVL+A + L
Sbjct: 473 FSSMPE--HDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSL 530
Query: 263 EDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEP-DLVLWN 321
G Q HG +K+ + LI Y KC M C K+F ++E D V WN
Sbjct: 531 SFGELGKQIHGLALKNNIADEATTENALIACYGKCGE--MDGCEKIFSRMAERRDNVTWN 588
Query: 322 TMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIK 381
+MISG+ H +L AL M + G R D ++ V SA +++++ G +VHA +++
Sbjct: 589 SMISGYI-HNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVR 647
Query: 382 SDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQ 441
+ + S+ V V +ALV MYSKCG L A R F+TMP N+ S NSMI+GYA+HG E+L+
Sbjct: 648 ACLESD-VVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALK 706
Query: 442 LFELM-MQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDL 500
LFE M + P+++TF+ VLSAC+H G +EEG K+F M + +G+ P +HFSCM D+
Sbjct: 707 LFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADV 766
Query: 501 LGRAGKLEEAERIIETMPFDPGSIEWAALLGAC-RKHG-NVELAVKAANKFLQLEPHNAV 558
LGRAG+L++ E IE MP P + W +LGAC R +G EL KAA QLEP NAV
Sbjct: 767 LGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAV 826
Query: 559 PYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKE 618
YV+L NMYA+ GRWE+ ++ M++ VKK+ G SW+ + + VH+FVA D SHP
Sbjct: 827 NYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADV 886
Query: 619 IHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEG- 677
I++ + E+ RKM+ AGYVP +AL D+ E KE L YHSEKLAVAF L + +
Sbjct: 887 IYKKLKELNRKMRDAGYVPQTGFAL---YDLEQENKEEILSYHSEKLAVAFVLAAQRSST 943
Query: 678 VPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
+PI ++KNLR+CGDCH+A K IS I GR+I +RD++RFH F++G CSC D+W
Sbjct: 944 LPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 156/564 (27%), Positives = 267/564 (47%), Gaps = 38/564 (6%)
Query: 18 TFTNLLKQC--ISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFR 75
TF +L+ +++ D+ + + K+ + ++ + ++K G+L AR F
Sbjct: 208 TFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFN 267
Query: 76 LTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRL 135
N + N ++ V+ A +LF ++ VS + + + E
Sbjct: 268 QMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPE------- 320
Query: 136 FKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
+ A E GL K RE G V+ + G + N ++ Y G
Sbjct: 321 YSLAEEVGL-----------KKGREVHGHVITTGLVDFMVG------IGNGLVNMYAKCG 363
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
+++A RVF+ M + +D +SWN+MI Q EA+ + M R + FT+ S
Sbjct: 364 SIADARRVFYFMTD--KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISS 421
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGML-DCMKVFEEISE 314
L++ L+ G Q HG +K G + N V + L+ +Y A G L +C K+F + E
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLY---AETGYLNECRKIFSSMPE 478
Query: 315 PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQ 374
D V WN++I ++ E +A++CF + QRAG + + +FS V SA S+LS LGKQ
Sbjct: 479 HDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQ 538
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPE-HNTVSLNSMITGYAQH 433
+H LA+K++I ++ + NAL+A Y KCG + ++F M E + V+ NSMI+GY +
Sbjct: 539 IHGLALKNNI-ADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHN 597
Query: 434 GVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKH 493
+ ++L L M+Q ++ + +VLSA A +E G + + + +E +
Sbjct: 598 ELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGME-VHACSVRACLESDVVV 656
Query: 494 FSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVK--AANKFLQ 551
S +VD+ + G+L+ A R TMP S W +++ +HG E A+K K
Sbjct: 657 GSALVDMYSKCGRLDYALRFFNTMPV-RNSYSWNSMISGYARHGQGEEALKLFETMKLDG 715
Query: 552 LEPHNAVPYVMLSNMYASAGRWEE 575
P + V +V + + + AG EE
Sbjct: 716 QTPPDHVTFVGVLSACSHAGLLEE 739
Score = 172 bits (436), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 129/476 (27%), Positives = 228/476 (47%), Gaps = 40/476 (8%)
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
+ +V+ N +I+A ++ AR++FDE+P + VS+ +++ ++ GEH A+ ++
Sbjct: 33 DKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRD 92
Query: 139 AREAGLCLDGFTLSGVIKACRE--DVGLVM--QLHCFAVLCGYSCYASVCNAVLARYGGR 194
+ G+ + + V++AC+E VG++ Q+H Y+ A V N +++ Y
Sbjct: 93 MVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMY--- 149
Query: 195 GLLSEAWRVFHEMGEG--------CRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMK 246
W+ +G ++ +SWN++I Q + + A +F M G +
Sbjct: 150 ------WKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 247 IDMFTMASVLTAFTCLE--DLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD 304
+T S++T L D+ Q + KSG + VGSGL+ ++K +
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGS--LSY 261
Query: 305 CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACS 364
KVF ++ + V N ++ G + + E+A F DM D S S
Sbjct: 262 ARKVFNQMETRNAVTLNGLMVGLVRQK-WGEEATKLFMDMNSM----IDVSPESYVILLS 316
Query: 365 NLSSPSL--------GKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP 416
+ SL G++VH I + + V + N LV MY+KCG++ DARRVF M
Sbjct: 317 SFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT 376
Query: 417 EHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQK 476
+ ++VS NSMITG Q+G E+++ ++ M + DI+P + T IS LS+CA + GQ+
Sbjct: 377 DKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQ 436
Query: 477 YFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGA 532
+ K GI+ + ++ L G L E +I +MP + + W +++GA
Sbjct: 437 -IHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 119/297 (40%), Gaps = 43/297 (14%)
Query: 35 GKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAIIDACVK 94
GK +H L +K I N Y KCG +D +FS A
Sbjct: 536 GKQIHGLALKNNIADEATTENALIACYGKCGEMDGCE---------KIFSRMA------- 579
Query: 95 HSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGV 154
R D V++N++I+ + H A+ L + G LD F + V
Sbjct: 580 --------------ERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATV 625
Query: 155 IKACREDVGLV--MQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCR 212
+ A L M++H +V V +A++ Y G L A R F+ M R
Sbjct: 626 LSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTM--PVR 683
Query: 213 DEISWNAMIVACGQCREGKEALVLFGEMVRMGMK-IDMFTMASVLTAFTCLEDLAGGMQF 271
+ SWN+MI + +G+EAL LF M G D T VL+A + L G +
Sbjct: 684 NSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK- 742
Query: 272 HGRMIKSGFNWNPHVG--SGLIDMYSKCAPRGMLDCMKVFEEI--SEPDLVLWNTMI 324
H + + P + S + D+ + G LD ++ F E +P++++W T++
Sbjct: 743 HFESMSDSYGLAPRIEHFSCMADVLGRA---GELDKLEDFIEKMPMKPNVLIWRTVL 796
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 451 bits (1159), Expect = e-126, Method: Compositional matrix adjust.
Identities = 262/721 (36%), Positives = 391/721 (54%), Gaps = 65/721 (9%)
Query: 61 YSKCGTLDNARTSFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLI 120
Y + G + A F+ + SYN +I +++ LAR+LFDE+P D+VS+N +I
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMI 133
Query: 121 AAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIK-ACREDVGLVMQ-------LHCFA 172
+ G A LF+ E +C LSG + C +D V + A
Sbjct: 134 KGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNA 193
Query: 173 VLCGY---SCYASVC--------------NAVLARYGGRGLLSEAWRVFHEMGEGCRDEI 215
+L Y S C N +L + + + EA + F M RD +
Sbjct: 194 LLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMN--VRDVV 251
Query: 216 SWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRM 275
SWN +I Q + EA LF E D+FT ++++ + + + +M
Sbjct: 252 SWNTIITGYAQSGKIDEARQLFDESPVQ----DVFTWTAMVSGYIQNRMVEEARELFDKM 307
Query: 276 I-KSGFNWNPHVG--------------------------SGLIDMYSKCAPRGMLDCMKV 308
++ +WN + + +I Y++C + + +
Sbjct: 308 PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGK--ISEAKNL 365
Query: 309 FEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSS 368
F+++ + D V W MI+G+SQ S +AL F M+R G R + SFS S C+++ +
Sbjct: 366 FDKMPKRDPVSWAAMIAGYSQSGH-SFEALRLFVQMEREGGRLNRSSFSSALSTCADVVA 424
Query: 369 PSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMIT 428
LGKQ+H +K + V NAL+ MY KCG++ +A +F M + VS N+MI
Sbjct: 425 LELGKQLHGRLVKGGYETG-CFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIA 483
Query: 429 GYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIE 488
GY++HG +L+ FE M +E + P++ T ++VLSAC+HTG V++G++YF M + +G+
Sbjct: 484 GYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVM 543
Query: 489 PEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANK 548
P ++H++CMVDLLGRAG LE+A +++ MPF+P + W LLGA R HGN ELA AA+K
Sbjct: 544 PNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADK 603
Query: 549 FLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVA 608
+EP N+ YV+LSN+YAS+GRW + ++ MR++GVKK PG SWI+I NK H F
Sbjct: 604 IFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSV 663
Query: 609 EDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVA 668
D HP EI ++ E+ +MK+AGYV L DV EEKER + YHSE+LAVA
Sbjct: 664 GDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVL---HDVEEEEKERMVRYHSERLAVA 720
Query: 669 FGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDY 728
+G++ G PI V+KNLR+C DCHNAIK ++ I+GR I +RD +RFH FK+G CSC DY
Sbjct: 721 YGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDY 780
Query: 729 W 729
W
Sbjct: 781 W 781
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/495 (24%), Positives = 227/495 (45%), Gaps = 46/495 (9%)
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
+ ++ +N I + ++ + A +F +PR VSYN +I+ + GE A +LF E
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 139 AREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVC--NAVLARYGGRGL 196
E L + G ++ ++G +L F ++ VC N +L+ Y G
Sbjct: 121 MPERDLVSWNVMIKGYVR--NRNLGKAREL--FEIM----PERDVCSWNTMLSGYAQNGC 172
Query: 197 LSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVL 256
+ +A VF M E ++++SWNA++ A Q + +EA +LF + + +L
Sbjct: 173 VDDARSVFDRMPE--KNDVSWNALLSAYVQNSKMEEACMLFKSRENWA----LVSWNCLL 226
Query: 257 TAFTCLEDLAGGMQFHGRM-IKSGFNWNP----HVGSGLIDMYSKCAPRGMLDCMKVFEE 311
F + + QF M ++ +WN + SG ID + ++F+E
Sbjct: 227 GGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKID-----------EARQLFDE 275
Query: 312 ISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSL 371
D+ W M+SG+ Q+ + E+A F M ++ S++ + + +
Sbjct: 276 SPVQDVFTWTAMVSGYIQNR-MVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEM 330
Query: 372 GKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYA 431
K++ + +P VS N ++ Y++CG + +A+ +FD MP+ + VS +MI GY+
Sbjct: 331 AKELFDV-----MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYS 385
Query: 432 QHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEA 491
Q G E+L+LF M +E N +F S LS CA +E G++ + K G E
Sbjct: 386 QSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV-KGGYETGC 444
Query: 492 KHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVK--AANKF 549
+ ++ + + G +EEA + + M + W ++ +HG E+A++ + K
Sbjct: 445 FVGNALLLMYCKCGSIEEANDLFKEMA-GKDIVSWNTMIAGYSRHGFGEVALRFFESMKR 503
Query: 550 LQLEPHNAVPYVMLS 564
L+P +A +LS
Sbjct: 504 EGLKPDDATMVAVLS 518
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
+F++ L C + GK LH +K ++ N L+Y KCG+++ A F+
Sbjct: 411 SFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM 470
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRG 127
++ S+N +I +H +A F+ + R PD + +++A +H G
Sbjct: 471 AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTG 524
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 449 bits (1155), Expect = e-126, Method: Compositional matrix adjust.
Identities = 271/717 (37%), Positives = 389/717 (54%), Gaps = 53/717 (7%)
Query: 22 LLKQCISQRDISTGKSLHALYIKTF-IPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNP 80
LLK IS + G+ +HA +KT P +L+N+ +YSK ++AR RLT
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLT--- 68
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
P ++VS+ +LI+ A G A+ F E R
Sbjct: 69 ----------------------------PARNVVSWTSLISGLAQNGHFSTALVEFFEMR 100
Query: 141 EAGLCLDGFTLSGVIKACREDVGLVM--QLHCFAVLCGYSCYASVCNAVLARYGGRGLLS 198
G+ + FT KA V Q+H AV CG V + Y L
Sbjct: 101 REGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRD 160
Query: 199 EAWRVFHEMGEGCRDEISWNAMI---VACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
+A ++F E+ E R+ +WNA I V G+ RE EA + E R+ + T +
Sbjct: 161 DARKLFDEIPE--RNLETWNAFISNSVTDGRPREAIEAFI---EFRRIDGHPNSITFCAF 215
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEP 315
L A + L GMQ HG +++SGF+ + V +GLID Y KC + + +F E+
Sbjct: 216 LNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKC--KQIRSSEIIFTEMGTK 273
Query: 316 DLVLWNTMISGFSQ-HEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQ 374
+ V W ++++ + Q HED E A + + ++ D S V SAC+ ++ LG+
Sbjct: 274 NAVSWCSLVAAYVQNHED--EKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRS 331
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHG 434
+HA A+K+ + + V +ALV MY KCG + D+ + FD MPE N V+ NS+I GYA G
Sbjct: 332 IHAHAVKACV-ERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQG 390
Query: 435 VEGESLQLFELMMQEDI--VPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAK 492
+L LFE M PN +TF+S+LSAC+ G VE G K F+ M+ +GIEP A+
Sbjct: 391 QVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAE 450
Query: 493 HFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQL 552
H+SC+VD+LGRAG +E A I+ MP P W AL ACR HG +L + AA +L
Sbjct: 451 HYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKL 510
Query: 553 EPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSS 612
+P ++ +V+LSN +A+AGRW E+ TV+ ++ G+KK G SWI + N+VH F A+D S
Sbjct: 511 DPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRS 570
Query: 613 HPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLI 672
H + KEI + ++ +M+ AGY PD++ +L D+ EEK + +HSEKLA+AFGL+
Sbjct: 571 HILNKEIQTTLAKLRNEMEAAGYKPDLKLSL---YDLEEEEKAAEVSHHSEKLALAFGLL 627
Query: 673 STKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
S VPI + KNLRICGDCH+ K +S REI VRD +RFH FK+G CSCKDYW
Sbjct: 628 SLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/128 (20%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTN 78
+++L C + G+S+HA +K + + ++ + +Y KCG ++++ +F
Sbjct: 313 ISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 372
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEI------PRPDIVSYNTLIAAHAHRGEHGPA 132
N+ + N++I + +A LF+E+ P P+ +++ +L++A + G
Sbjct: 373 EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENG 432
Query: 133 VRLFKEAR 140
+++F R
Sbjct: 433 MKIFDSMR 440
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 447 bits (1150), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/537 (44%), Positives = 331/537 (61%), Gaps = 10/537 (1%)
Query: 185 NAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMG 244
N +L Y G L EA +VF +M + RD ++W +I Q +AL+ F +M+R G
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMPQ--RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFG 156
Query: 245 MKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD 304
+ FT++SV+ A G Q HG +K GF+ N HVGS L+D+Y++ M D
Sbjct: 157 YSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGL--MDD 214
Query: 305 CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACS 364
VF+ + + V WN +I+G ++ +E AL FQ M R GFRP S++ + ACS
Sbjct: 215 AQLVFDALESRNDVSWNALIAGHARRSG-TEKALELFQGMLRDGFRPSHFSYASLFGACS 273
Query: 365 NLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLN 424
+ GK VHA IKS N L+ MY+K G++HDAR++FD + + + VS N
Sbjct: 274 STGFLEQGKWVHAYMIKSG-EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWN 332
Query: 425 SMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEK 484
S++T YAQHG E++ FE M + I PN I+F+SVL+AC+H+G ++EG Y+ +MK K
Sbjct: 333 SLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMK-K 391
Query: 485 FGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVK 544
GI PEA H+ +VDLLGRAG L A R IE MP +P + W ALL ACR H N EL
Sbjct: 392 DGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAY 451
Query: 545 AANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVH 604
AA +L+P + P+V+L N+YAS GRW ++A V++ M+E GVKK+P CSW++I+N +H
Sbjct: 452 AAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIH 511
Query: 605 VFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEK 664
+FVA D HP +EI E+L K+K+ GYVPD + V +E+E L YHSEK
Sbjct: 512 MFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVI---VHVDQQEREVNLQYHSEK 568
Query: 665 LAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEG 721
+A+AF L++T G I + KN+R+CGDCH AIKL S + GREI VRD +RFH FK+
Sbjct: 569 IALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDA 625
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 200/408 (49%), Gaps = 41/408 (10%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTN 78
+ LLK+C + + G+ +HA +++ H + N +Y+KCG+L+ AR
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR------- 115
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
++F+++P+ D V++ TLI+ ++ A+ F +
Sbjct: 116 ------------------------KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQ 151
Query: 139 AREAGLCLDGFTLSGVIK-ACREDVGLV-MQLHCFAVLCGYSCYASVCNAVLARYGGRGL 196
G + FTLS VIK A E G QLH F V CG+ V +A+L Y GL
Sbjct: 152 MLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGL 211
Query: 197 LSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVL 256
+ +A VF + R+++SWNA+I + ++AL LF M+R G + F+ AS+
Sbjct: 212 MDDAQLVFDAL--ESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLF 269
Query: 257 TAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPD 316
A + L G H MIKSG G+ L+DMY+K + D K+F+ +++ D
Sbjct: 270 GACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSG--SIHDARKIFDRLAKRD 327
Query: 317 LVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVH 376
+V WN++++ ++QH ++A+ F++M+R G RP++ SF V +ACS+ G +
Sbjct: 328 VVSWNSLLTAYAQH-GFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYY 386
Query: 377 ALAIKSDI-PSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSL 423
L K I P V +V + + G+L+ A R + MP T ++
Sbjct: 387 ELMKKDGIVPEAWHYVT--VVDLLGRAGDLNRALRFIEEMPIEPTAAI 432
Score = 152 bits (385), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 183/337 (54%), Gaps = 9/337 (2%)
Query: 254 SVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEIS 313
++L T + L G H +++S F + +G+ L++MY+KC + + KVFE++
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG--SLEEARKVFEKMP 122
Query: 314 EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGK 373
+ D V W T+ISG+SQH D DAL+ F M R G+ P++ + S V A + G
Sbjct: 123 QRDFVTWTTLISGYSQH-DRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGH 181
Query: 374 QVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQH 433
Q+H +K SN V V +AL+ +Y++ G + DA+ VFD + N VS N++I G+A+
Sbjct: 182 QLHGFCVKCGFDSN-VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARR 240
Query: 434 GVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKH 493
++L+LF+ M+++ P++ ++ S+ AC+ TG +E+G K+ + K G + A
Sbjct: 241 SGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG-KWVHAYMIKSGEKLVAFA 299
Query: 494 FSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ-- 551
+ ++D+ ++G + +A +I + + + W +LL A +HG + AV + +
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 552 LEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGV 588
+ P N + ++ + + +G +E LM++ G+
Sbjct: 359 IRP-NEISFLSVLTACSHSGLLDEGWHYYELMKKDGI 394
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 135/319 (42%), Gaps = 40/319 (12%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T ++++K ++R G LH +K + ++ + LY++ G +D+A+ F
Sbjct: 163 TLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDAL 222
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+ N S+NA LIA HA R A+ LF+
Sbjct: 223 ESRNDVSWNA-------------------------------LIAGHARRSGTEKALELFQ 251
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQ---LHCFAVLCGYSCYASVCNAVLARYGGR 194
G F+ + + AC G + Q +H + + G A N +L Y
Sbjct: 252 GMLRDGFRPSHFSYASLFGAC-SSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKS 310
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
G + +A ++F + + RD +SWN+++ A Q GKEA+ F EM R+G++ + + S
Sbjct: 311 GSIHDARKIFDRLAK--RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLS 368
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEIS- 313
VLTA + L G ++ M K G ++D+ + + ++ EE+
Sbjct: 369 VLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAG--DLNRALRFIEEMPI 426
Query: 314 EPDLVLWNTMISGFSQHED 332
EP +W +++ H++
Sbjct: 427 EPTAAIWKALLNACRMHKN 445
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 117/250 (46%), Gaps = 6/250 (2%)
Query: 342 QDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSK 401
D++ + D ++ + C+ G+ VHA ++S I + + + N L+ MY+K
Sbjct: 49 NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQS-IFRHDIVMGNTLLNMYAK 107
Query: 402 CGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISV 461
CG+L +AR+VF+ MP+ + V+ ++I+GY+QH ++L F M++ PN T SV
Sbjct: 108 CGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSV 167
Query: 462 LSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDP 521
+ A A + G + K G + S ++DL R G +++A+ + + +
Sbjct: 168 IKAAAAERRGCCGHQLHGFCV-KCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALE-SR 225
Query: 522 GSIEWAALLGACRKHGNVELAVKAANKFLQ--LEPHNAVPYVMLSNMYASAGRWEESATV 579
+ W AL+ + E A++ L+ P + Y L +S G E+ V
Sbjct: 226 NDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSH-FSYASLFGACSSTGFLEQGKWV 284
Query: 580 KRLMRERGVK 589
M + G K
Sbjct: 285 HAYMIKSGEK 294
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 446 bits (1148), Expect = e-125, Method: Compositional matrix adjust.
Identities = 251/716 (35%), Positives = 397/716 (55%), Gaps = 45/716 (6%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF+ + K S R + G+ LH +K+ + N Y
Sbjct: 197 TFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFY---------------- 240
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+K+ + AR++FDE+ D++S+N++I + G + +F
Sbjct: 241 ---------------LKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFV 285
Query: 138 EAREAGLCLDGFTLSGVIKACRED--VGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
+ +G+ +D T+ V C + + L +H V +S CN +L Y G
Sbjct: 286 QMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCG 345
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREG--KEALVLFGEMVRMGMKIDMFTMA 253
L A VF EM + R +S+ +MI G REG EA+ LF EM G+ D++T+
Sbjct: 346 DLDSAKAVFREMSD--RSVVSYTSMIA--GYAREGLAGEAVKLFEEMEEEGISPDVYTVT 401
Query: 254 SVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEIS 313
+VL L G + H + ++ ++ V + L+DMY+KC M + VF E+
Sbjct: 402 AVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS--MQEAELVFSEMR 459
Query: 314 EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGK 373
D++ WNT+I G+S++ +E + ++ F PD+ + +CV AC++LS+ G+
Sbjct: 460 VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 519
Query: 374 QVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQH 433
++H +++ S+R V N+LV MY+KCG L A +FD + + VS MI GY H
Sbjct: 520 EIHGYIMRNGYFSDR-HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMH 578
Query: 434 GVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKH 493
G E++ LF M Q I + I+F+S+L AC+H+G V+EG ++FN+M+ + IEP +H
Sbjct: 579 GFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEH 638
Query: 494 FSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLE 553
++C+VD+L R G L +A R IE MP P + W ALL CR H +V+LA K A K +LE
Sbjct: 639 YACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELE 698
Query: 554 PHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSH 613
P N YV+++N+YA A +WE+ +++ + +RG++K PGCSWI+I +V++FVA DSS+
Sbjct: 699 PENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSN 758
Query: 614 PMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLIS 673
P + I ++ ++ +M + GY P ++AL E++ EKE L HSEKLA+A G+IS
Sbjct: 759 PETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEM---EKEEALCGHSEKLAMALGIIS 815
Query: 674 TKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
+ G I V KNLR+CGDCH K +S ++ REI +RD++RFH FK+GHCSC+ +W
Sbjct: 816 SGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 143/538 (26%), Positives = 255/538 (47%), Gaps = 44/538 (8%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T ++L+ C + + GK + + L + +L+Y+ CG L A
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEAS------ 149
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+FDE+ + +N L+ A G+ ++ LFK
Sbjct: 150 -------------------------RVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFK 184
Query: 138 EAREAGLCLDGFTLSGVIK--ACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
+ +G+ +D +T S V K + V QLH F + G+ SV N+++A Y
Sbjct: 185 KMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQ 244
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
+ A +VF EM E RD ISWN++I ++ L +F +M+ G++ID+ T+ SV
Sbjct: 245 RVDSARKVFDEMTE--RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMK-VFEEISE 314
++ G H +K+ F+ + L+DMYSKC G LD K VF E+S+
Sbjct: 303 FAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKC---GDLDSAKAVFREMSD 359
Query: 315 PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQ 374
+V + +MI+G+++ E L+ +A+ F++M+ G PD + + V + C+ GK+
Sbjct: 360 RSVVSYTSMIAGYAR-EGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKR 418
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHG 434
VH ++D+ + + V+NAL+ MY+KCG++ +A VF M + +S N++I GY+++
Sbjct: 419 VHEWIKENDLGFD-IFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNC 477
Query: 435 VEGESLQLFELMMQED-IVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKH 493
E+L LF L+++E P+ T VL ACA ++G++ + G +
Sbjct: 478 YANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN-GYFSDRHV 536
Query: 494 FSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ 551
+ +VD+ + G L A + + + + W ++ HG + A+ N+ Q
Sbjct: 537 ANSLVDMYAKCGALLLAHMLFDDIA-SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQ 593
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 212/409 (51%), Gaps = 12/409 (2%)
Query: 146 LDGFTLSGVIKACREDVGLV--MQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRV 203
+D TL V++ C + L ++ F G+ +++ + + Y G L EA RV
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 204 FHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLE 263
F E+ + WN ++ + + ++ LF +M+ G+++D +T + V +F+ L
Sbjct: 152 FDEVK--IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR 209
Query: 264 DLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTM 323
+ GG Q HG ++KSGF VG+ L+ Y K + + KVF+E++E D++ WN++
Sbjct: 210 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK--NQRVDSARKVFDEMTERDVISWNSI 267
Query: 324 ISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSD 383
I+G+ + L+E L F M +G D + V + C++ SLG+ VH++ +K+
Sbjct: 268 INGYVSN-GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC 326
Query: 384 IPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLF 443
S N L+ MYSKCG+L A+ VF M + + VS SMI GYA+ G+ GE+++LF
Sbjct: 327 F-SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLF 385
Query: 444 ELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEK-FGIEPEAKHFSCMVDLLG 502
E M +E I P+ T +VL+ CA ++EG++ +KE G + + ++D+
Sbjct: 386 EEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYA 443
Query: 503 RAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ 551
+ G ++EAE + M I W ++G K+ A+ N L+
Sbjct: 444 KCGSMQEAELVFSEMRV-KDIISWNTIIGGYSKNCYANEALSLFNLLLE 491
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 156/315 (49%), Gaps = 9/315 (2%)
Query: 247 IDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCM 306
ID T+ SVL + L G + + +GF + ++GS L MY+ C + +
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGD--LKEAS 149
Query: 307 KVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNL 366
+VF+E+ + WN +++ ++ D S ++ F+ M +G D +FSCV+ + S+L
Sbjct: 150 RVFDEVKIEKALFWNILMNELAKSGDFS-GSIGLFKKMMSSGVEMDSYTFSCVSKSFSSL 208
Query: 367 SSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSM 426
S G+Q+H +KS R SV N+LVA Y K + AR+VFD M E + +S NS+
Sbjct: 209 RSVHGGEQLHGFILKSGF-GERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSI 267
Query: 427 ITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFG 486
I GY +G+ + L +F M+ I + T +SV + CA + + G+ + + K
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHS-IGVKAC 326
Query: 487 IEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAA 546
E + + ++D+ + G L+ A+ + M D + + +++ + G LA +A
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKAVFREMS-DRSVVSYTSMIAGYAREG---LAGEAV 382
Query: 547 NKFLQLEPHNAVPYV 561
F ++E P V
Sbjct: 383 KLFEEMEEEGISPDV 397
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 446 bits (1148), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/714 (33%), Positives = 384/714 (53%), Gaps = 42/714 (5%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T +L+ C + + G+ LHA K + + LY+KC ++ A F T
Sbjct: 391 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET 450
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
NV +N ++ +A L D++ + R+F+
Sbjct: 451 EVENVVLWNVML----------VAYGLLDDLRN---------------------SFRIFR 479
Query: 138 EAREAGLCLDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
+ + + + +T ++K C D+ L Q+H + + A VC+ ++ Y G
Sbjct: 480 QMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLG 539
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
L AW + +D +SW MI Q +AL F +M+ G++ D + +
Sbjct: 540 KLDTAWDILIRFA--GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNA 597
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEP 315
++A L+ L G Q H + SGF+ + + L+ +YS+C + + FE+
Sbjct: 598 VSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGK--IEESYLAFEQTEAG 655
Query: 316 DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQV 375
D + WN ++SGF Q + +E+AL F M R G ++ +F A S ++ GKQV
Sbjct: 656 DNIAWNALVSGFQQSGN-NEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQV 714
Query: 376 HALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGV 435
HA+ K+ S V NAL++MY+KCG++ DA + F + N VS N++I Y++HG
Sbjct: 715 HAVITKTGYDS-ETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGF 773
Query: 436 EGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFS 495
E+L F+ M+ ++ PN++T + VLSAC+H G V++G YF M ++G+ P+ +H+
Sbjct: 774 GSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYV 833
Query: 496 CMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPH 555
C+VD+L RAG L A+ I+ MP P ++ W LL AC H N+E+ AA+ L+LEP
Sbjct: 834 CVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPE 893
Query: 556 NAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPM 615
++ YV+LSN+YA + +W+ ++ M+E+GVKK+PG SWI++ N +H F D +HP+
Sbjct: 894 DSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPL 953
Query: 616 IKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTK 675
EIHEY ++ ++ + GYV D L ++ E+K+ + HSEKLA++FGL+S
Sbjct: 954 ADEIHEYFQDLTKRASEIGYVQDCFSLLN---ELQHEQKDPIIFIHSEKLAISFGLLSLP 1010
Query: 676 EGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
VPI V+KNLR+C DCH IK +S +S REI VRDA+RFH F+ G CSCKDYW
Sbjct: 1011 ATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 210 bits (534), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 150/544 (27%), Positives = 252/544 (46%), Gaps = 46/544 (8%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTN 78
F+++L C + G+ LH L +K TY+ N LY G L +A
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE------- 343
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
+F + + D V+YNTLI + G A+ LFK
Sbjct: 344 ------------------------HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379
Query: 139 AREAGLCLDGFTLSGVIKACREDVGLV--MQLHCFAVLCGYSCYASVCNAVLARYGGRGL 196
GL D TL+ ++ AC D L QLH + G++ + A+L Y
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439
Query: 197 LSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVL 256
+ A F E + + WN M+VA G + + + +F +M + + +T S+L
Sbjct: 440 IETALDYFLET--EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 497
Query: 257 TAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD-CMKVFEEISEP 315
L DL G Q H ++IK+ F N +V S LIDMY+K G LD + +
Sbjct: 498 KTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKL---GKLDTAWDILIRFAGK 554
Query: 316 DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQV 375
D+V W TMI+G++Q+ + + AL F+ M G R D+ + SAC+ L + G+Q+
Sbjct: 555 DVVSWTTMIAGYTQY-NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 613
Query: 376 HALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGV 435
HA A S S+ + NALV +YS+CG + ++ F+ + ++ N++++G+ Q G
Sbjct: 614 HAQACVSGFSSD-LPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGN 672
Query: 436 EGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFS 495
E+L++F M +E I NN TF S + A + T +++G++ ++ K G + E + +
Sbjct: 673 NEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVIT-KTGYDSETEVCN 731
Query: 496 CMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPH 555
++ + + G + +AE+ + + W A++ A KHG +A + F Q+
Sbjct: 732 ALISMYAKCGSISDAEKQFLEVS-TKNEVSWNAIINAYSKHG---FGSEALDSFDQMIHS 787
Query: 556 NAVP 559
N P
Sbjct: 788 NVRP 791
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 223/461 (48%), Gaps = 10/461 (2%)
Query: 86 NAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLC 145
N +ID ++ + LAR +FD + D S+ +I+ + A+RLF + G+
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 146 LDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRV 203
+ S V+ AC+ E + + QLH + G+S VCNA+++ Y G L A +
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 204 FHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLE 263
F M + RD +++N +I QC G++A+ LF M G++ D T+AS++ A +
Sbjct: 346 FSNMSQ--RDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 403
Query: 264 DLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTM 323
L G Q H K GF N + L+++Y+KCA + + F E ++VLWN M
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD--IETALDYFLETEVENVVLWNVM 461
Query: 324 ISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSD 383
+ + +DL ++ F+ MQ P+ ++ + C L LG+Q+H+ IK++
Sbjct: 462 LVAYGLLDDL-RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN 520
Query: 384 IPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLF 443
N V + L+ MY+K G L A + + VS +MI GY Q+ + ++L F
Sbjct: 521 FQLN-AYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTF 579
Query: 444 ELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGR 503
M+ I + + + +SACA ++EGQ+ + G + + +V L R
Sbjct: 580 RQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSR 638
Query: 504 AGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVK 544
GK+EE+ E +I W AL+ ++ GN E A++
Sbjct: 639 CGKIEESYLAFEQTE-AGDNIAWNALVSGFQQSGNNEEALR 678
Score = 179 bits (454), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 140/474 (29%), Positives = 221/474 (46%), Gaps = 22/474 (4%)
Query: 55 NHFTL--LYSKC----GTLDNAR----TSFRLTNNPNVFSYNAIIDACVKHSHLHLAREL 104
NH TL L C G+LD R +L + N + D + L+ A ++
Sbjct: 83 NHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKV 142
Query: 105 FDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACRED--- 161
FDE+P I ++N +I A R G LF + + T SGV++ACR
Sbjct: 143 FDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVA 202
Query: 162 VGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMI 221
+V Q+H + G VCN ++ Y G + A RVF G +D SW AMI
Sbjct: 203 FDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFD--GLRLKDHSSWVAMI 260
Query: 222 VACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFN 281
+ EA+ LF +M +G+ + +SVL+A +E L G Q HG ++K GF+
Sbjct: 261 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 320
Query: 282 WNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICF 341
+ +V + L+ +Y ++ +F +S+ D V +NT+I+G SQ E A+ F
Sbjct: 321 SDTYVCNALVSLYFHLG--NLISAEHIFSNMSQRDAVTYNTLINGLSQC-GYGEKAMELF 377
Query: 342 QDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSK 401
+ M G PD + + + ACS + G+Q+HA K SN + AL+ +Y+K
Sbjct: 378 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNN-KIEGALLNLYAK 436
Query: 402 CGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISV 461
C ++ A F N V N M+ Y S ++F M E+IVPN T+ S+
Sbjct: 437 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 496
Query: 462 LSACAHTGKVEEGQK-YFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERII 514
L C G +E G++ + ++K F + A S ++D+ + GKL+ A I+
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQL--NAYVCSVLIDMYAKLGKLDTAWDIL 548
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 446 bits (1148), Expect = e-125, Method: Compositional matrix adjust.
Identities = 245/656 (37%), Positives = 380/656 (57%), Gaps = 53/656 (8%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAVRL 135
P +Y +I C + L +++ + I P IV +N L+ +A G A ++
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 136 FKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
F E LC ++G YA V G
Sbjct: 143 FDEMPNRDLCSWNVMVNG--------------------------YAEV-----------G 165
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRM-GMKIDMFTMAS 254
LL EA ++F EM E +D SW AM+ + + +EALVL+ M R+ + ++FT++
Sbjct: 166 LLEEARKLFDEMTE--KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSI 223
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD-CMKVFEEIS 313
+ A ++ + G + HG ++++G + + + S L+DMY KC G +D +F++I
Sbjct: 224 AVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC---GCIDEARNIFDKIV 280
Query: 314 EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGK 373
E D+V W +MI + + E F ++ + RP++ +F+ V +AC++L++ LGK
Sbjct: 281 EKDVVSWTSMIDRYFKSSRWRE-GFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGK 339
Query: 374 QVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQH 433
QVH + + +++LV MY+KCGN+ A+ V D P+ + VS S+I G AQ+
Sbjct: 340 QVHGYMTRVGFDPYSFA-SSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQN 398
Query: 434 GVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKH 493
G E+L+ F+L+++ P+++TF++VLSAC H G VE+G ++F + EK + + H
Sbjct: 399 GQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDH 458
Query: 494 FSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLE 553
++C+VDLL R+G+ E+ + +I MP P WA++LG C +GN++LA +AA + ++E
Sbjct: 459 YTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIE 518
Query: 554 PHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSH 613
P N V YV ++N+YA+AG+WEE +++ M+E GV K+PG SW +I K HVF+A D+SH
Sbjct: 519 PENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSH 578
Query: 614 PMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLIS 673
PM +I E++ E+ +KMK+ GYVP L DV E+KE L+YHSEKLAVAF ++S
Sbjct: 579 PMYNQIVEFLRELRKKMKEEGYVPATSLVL---HDVEDEQKEENLVYHSEKLAVAFAILS 635
Query: 674 TKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
T+EG I V KNLR C DCH AIK IS I+ R+ITVRD+ RFHCF+ G CSC DYW
Sbjct: 636 TEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 130/476 (27%), Positives = 226/476 (47%), Gaps = 22/476 (4%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKT--FIPHSTYLSNHFTLLYSKCGTLDNARTSFR 75
T+ NL++ C R + GK +H +I+T F+P + N +Y+KCG+L +AR F
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHE-HIRTSGFVP-GIVIWNRLLRMYAKCGSLVDARKVFD 144
Query: 76 LTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRL 135
N ++ S+N +++ + L AR+LFDE+ D S+ ++ + + + A+ L
Sbjct: 145 EMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVL 204
Query: 136 FK-EAREAGLCLDGFTLS--GVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYG 192
+ R + FT+S A + + ++H V G + ++++ YG
Sbjct: 205 YSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYG 264
Query: 193 GRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTM 252
G + EA +F ++ E +D +SW +MI + +E LF E+V + + +T
Sbjct: 265 KCGCIDEARNIFDKIVE--KDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTF 322
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMK-VFEE 311
A VL A L G Q HG M + GF+ S L+DMY+KC G ++ K V +
Sbjct: 323 AGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKC---GNIESAKHVVDG 379
Query: 312 ISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSL 371
+PDLV W ++I G +Q+ ++AL F + ++G +PD +F V SAC++
Sbjct: 380 CPKPDLVSWTSLIGGCAQNGQ-PDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEK 438
Query: 372 GKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSL-NSMITGY 430
G + + S+ LV + ++ G + V MP + L S++ G
Sbjct: 439 GLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGC 498
Query: 431 AQHGVEGESLQLFELMMQE--DIVPNN-ITFISVLSACAHTGKVEEGQKYFNMMKE 483
+ +G ++ L E QE I P N +T++++ + A GK EE K M+E
Sbjct: 499 STYG----NIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQE 550
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 445 bits (1144), Expect = e-125, Method: Compositional matrix adjust.
Identities = 262/780 (33%), Positives = 415/780 (53%), Gaps = 81/780 (10%)
Query: 23 LKQCISQRDIST--GKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNP 80
L+ C+ R S +++H I ++ N +Y K L+ AR F + P
Sbjct: 19 LRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP 78
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIP--RPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
+ + ++ + LAR +F++ P D V YN +I +H + A+ LF +
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 139 AREAGLCLDGFTLSGVIKA---CREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYG--- 192
+ G D FT + V+ +D +Q H A+ G SV NA+++ Y
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 193 -GRGLLSEAWRVFHEMGEGCRDEISWNAMIVA---------------------------- 223
LL A +VF E+ E +DE SW M+
Sbjct: 199 SSPSLLHSARKVFDEILE--KDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNA 256
Query: 224 --CGQCREG--KEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSG 279
G G +EAL + MV G+++D FT SV+ A L G Q H +++
Sbjct: 257 MISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE 316
Query: 280 FNWNPHVGSGLIDMYSKCA----PRGMLDCMK-------------------------VFE 310
+++ H + L+ +Y KC R + + M +F+
Sbjct: 317 -DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFK 375
Query: 311 EISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPS 370
E+ E +++ W MISG +++ E+ L F M+R GF P D +FS +C+ L +
Sbjct: 376 EMKEKNILSWMIMISGLAEN-GFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYC 434
Query: 371 LGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGY 430
G+Q HA +K S+ +S NAL+ MY+KCG + +AR+VF TMP ++VS N++I
Sbjct: 435 NGQQYHAQLLKIGFDSS-LSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAAL 493
Query: 431 AQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPE 490
QHG E++ ++E M+++ I P+ IT ++VL+AC+H G V++G+KYF+ M+ + I P
Sbjct: 494 GQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPG 553
Query: 491 AKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFL 550
A H++ ++DLL R+GK +AE +IE++PF P + W ALL CR HGN+EL + AA+K
Sbjct: 554 ADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLF 613
Query: 551 QLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAED 610
L P + Y++LSNM+A+ G+WEE A V++LMR+RGVKK+ CSWI+++ +VH F+ +D
Sbjct: 614 GLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDD 673
Query: 611 SSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAE-EKERRLLYHSEKLAVAF 669
+SHP + ++ Y+ ++ ++M++ GYVPD + L DV ++ KE L HSEK+AVAF
Sbjct: 674 TSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVL---HDVESDGHKEDMLTTHSEKIAVAF 730
Query: 670 GLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
GL+ G I + KNLR CGDCHN + +S + R+I +RD RFH F+ G CSC ++W
Sbjct: 731 GLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 154/322 (47%), Gaps = 13/322 (4%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T+ ++++ C + + GK +HA Y+ S + N LY KCG D AR F
Sbjct: 288 TYPSVIRACATAGLLQLGKQVHA-YVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKM 346
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
++ S+NA++ V H+ A+ +F E+ +I+S+ +I+ A G ++LF
Sbjct: 347 PAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFS 406
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLV---MQLHCFAVLCGYSCYASVCNAVLARYGGR 194
+ G + SG IK+C +G Q H + G+ S NA++ Y
Sbjct: 407 CMKREGFEPCDYAFSGAIKSCAV-LGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKC 465
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
G++ EA +VF M C D +SWNA+I A GQ G EA+ ++ EM++ G++ D T+ +
Sbjct: 466 GVVEEARQVFRTM--PCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLT 523
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVG--SGLIDMYSKCAPRGMLDCMKVFEEI 312
VLTA + + G ++ M ++ + P + LID+ C D V E +
Sbjct: 524 VLTACSHAGLVDQGRKYFDSM-ETVYRIPPGADHYARLIDLL--CRSGKFSDAESVIESL 580
Query: 313 S-EPDLVLWNTMISGFSQHEDL 333
+P +W ++SG H ++
Sbjct: 581 PFKPTAEIWEALLSGCRVHGNM 602
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 4/131 (3%)
Query: 1 MNQFPCXXXXXXXXXXXTFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLL 60
+ F C F+ +K C G+ HA +K S N +
Sbjct: 402 LKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITM 461
Query: 61 YSKCGTLDNARTSFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEI----PRPDIVSY 116
Y+KCG ++ AR FR + S+NA+I A +H H A ++++E+ RPD ++
Sbjct: 462 YAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITL 521
Query: 117 NTLIAAHAHRG 127
T++ A +H G
Sbjct: 522 LTVLTACSHAG 532
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 439 bits (1128), Expect = e-123, Method: Compositional matrix adjust.
Identities = 254/699 (36%), Positives = 381/699 (54%), Gaps = 48/699 (6%)
Query: 36 KSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRL---TNNPNVFSYNAIIDAC 92
K +H I + H T+L N LL + + S+ L T PN+F YN++I+
Sbjct: 30 KQIHVSLINHHLHHDTFLVN---LLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGF 86
Query: 93 VKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLS 152
V + HL E D LF R+ GL L GFT
Sbjct: 87 VNN---HLFHETLD----------------------------LFLSIRKHGLYLHGFTFP 115
Query: 153 GVIKACREDVG--LVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEG 210
V+KAC L + LH V CG++ + ++L+ Y G G L++A ++F E+ +
Sbjct: 116 LVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPD- 174
Query: 211 CRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQ 270
R ++W A+ +EA+ LF +MV MG+K D + + VL+A + DL G
Sbjct: 175 -RSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEW 233
Query: 271 FHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQH 330
M + N V + L+++Y+KC M VF+ + E D+V W+TMI G++ +
Sbjct: 234 IVKYMEEMEMQKNSFVRTTLVNLYAKCGK--MEKARSVFDSMVEKDIVTWSTMIQGYASN 291
Query: 331 EDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVS 390
++ + F M + +PD S S+C++L + LG+ +L + + +N +
Sbjct: 292 S-FPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTN-LF 349
Query: 391 VNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQED 450
+ NAL+ MY+KCG + VF M E + V +N+ I+G A++G S +F +
Sbjct: 350 MANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLG 409
Query: 451 IVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEA 510
I P+ TF+ +L C H G +++G ++FN + + ++ +H+ CMVDL GRAG L++A
Sbjct: 410 ISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDA 469
Query: 511 ERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASA 570
R+I MP P +I W ALL CR + +LA + + LEP NA YV LSN+Y+
Sbjct: 470 YRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVG 529
Query: 571 GRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKM 630
GRW+E+A V+ +M ++G+KK PG SWI+++ KVH F+A+D SHP+ +I+ + ++ +M
Sbjct: 530 GRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEM 589
Query: 631 KQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLRICG 690
+ G+VP + DV EEKER L YHSEKLAVA GLIST G I VVKNLR+CG
Sbjct: 590 RLMGFVPTTEFVFF---DVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCG 646
Query: 691 DCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
DCH +KLIS I+ REI VRD +RFHCF G CSC DYW
Sbjct: 647 DCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 127/527 (24%), Positives = 205/527 (38%), Gaps = 124/527 (23%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF +LK C G LH+L +K H +YS G L++A
Sbjct: 113 TFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAH------ 166
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+LFDEIP +V++ L + + G H A+ LFK
Sbjct: 167 -------------------------KLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFK 201
Query: 138 EAREAGLCLDGFTLSGVIKACRE----DVG---------LVMQLHCFAVLCGYSCYASVC 184
+ E G+ D + + V+ AC D G + MQ + F V
Sbjct: 202 KMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSF-----------VR 250
Query: 185 NAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMG 244
++ Y G + +A VF M E +D ++W+ MI KE + LF +M++
Sbjct: 251 TTLVNLYAKCGKMEKARSVFDSMVE--KDIVTWSTMIQGYASNSFPKEGIELFLQMLQEN 308
Query: 245 MKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD 304
+K D F++ L++ L L G + + F N + + LIDMY+KC M
Sbjct: 309 LKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCG--AMAR 366
Query: 305 CMKVFEEISEPDLVLWNTMISGFSQ--HEDLSEDALICFQDMQRAGFRPDDCSFSCVTSA 362
+VF+E+ E D+V+ N ISG ++ H LS F ++ G PD +F +
Sbjct: 367 GFEVFKEMKEKDIVIMNAAISGLAKNGHVKLS---FAVFGQTEKLGISPDGSTFLGLLCG 423
Query: 363 CSNLSSPSLGKQVHALAIKSDIP-SNRVSVNNAL----------VAMYSKCGNLHDARRV 411
C VHA I+ + N +S AL V ++ + G L DA R+
Sbjct: 424 C-----------VHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRL 472
Query: 412 FDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKV 471
MP + PN I + ++LS C V
Sbjct: 473 ICDMP----------------------------------MRPNAIVWGALLSGCR---LV 495
Query: 472 EEGQKYFNMMKEKFGIEP-EAKHFSCMVDLLGRAGKLEEAERIIETM 517
++ Q ++KE +EP A ++ + ++ G+ +EA + + M
Sbjct: 496 KDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMM 542
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 245/666 (36%), Positives = 377/666 (56%), Gaps = 41/666 (6%)
Query: 98 LHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCL-DGFTLSGVIK 156
L AR++FDEIP+P+ ++NTLI A+A + ++ F + C + +T +IK
Sbjct: 80 LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIK 139
Query: 157 ACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDE 214
A E + L LH AV V N+++ Y G L A +VF + E +D
Sbjct: 140 AAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE--KDV 197
Query: 215 ISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGR 274
+SWN+MI Q +AL LF +M +K TM VL+A + +L G Q
Sbjct: 198 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY 257
Query: 275 MIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLS 334
+ ++ N N + + ++DMY+KC + D ++F+ + E D V W TM+ G++ ED
Sbjct: 258 IEENRVNVNLTLANAMLDMYTKCG--SIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYE 315
Query: 335 ------------------------------EDALICFQDMQ-RAGFRPDDCSFSCVTSAC 363
+ALI F ++Q + + + + SAC
Sbjct: 316 AAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSAC 375
Query: 364 SNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSL 423
+ + + LG+ +H+ K I N V +AL+ MYSKCG+L +R VF+++ + +
Sbjct: 376 AQVGALELGRWIHSYIKKHGIRMN-FHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVW 434
Query: 424 NSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKE 483
++MI G A HG E++ +F M + ++ PN +TF +V AC+HTG V+E + F+ M+
Sbjct: 435 SAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMES 494
Query: 484 KFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAV 543
+GI PE KH++C+VD+LGR+G LE+A + IE MP P + W ALLGAC+ H N+ LA
Sbjct: 495 NYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAE 554
Query: 544 KAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKV 603
A + L+LEP N +V+LSN+YA G+WE + +++ MR G+KK+PGCS I+ID +
Sbjct: 555 MACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMI 614
Query: 604 HVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSE 663
H F++ D++HPM ++++ + E++ K+K GY P+I L E+ E KE+ L HSE
Sbjct: 615 HEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEE--EEMKEQSLNLHSE 672
Query: 664 KLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHC 723
KLA+ +GLIST+ I V+KNLR+CGDCH+ KLIS + REI VRD +RFH F+ G C
Sbjct: 673 KLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQC 732
Query: 724 SCKDYW 729
SC D+W
Sbjct: 733 SCNDFW 738
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 164/311 (52%), Gaps = 8/311 (2%)
Query: 270 QFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQ 329
Q HG MI++G +P+ S L M + + + KVF+EI +P+ WNT+I ++
Sbjct: 48 QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYAS 107
Query: 330 HEDLSEDALICFQDM-QRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNR 388
D ++ F DM + P+ +F + A + +SS SLG+ +H +A+KS + S+
Sbjct: 108 GPD-PVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSD- 165
Query: 389 VSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQ 448
V V N+L+ Y CG+L A +VF T+ E + VS NSMI G+ Q G ++L+LF+ M
Sbjct: 166 VFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMES 225
Query: 449 EDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLE 508
ED+ +++T + VLSACA +E G++ + ++E + + M+D+ + G +E
Sbjct: 226 EDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEEN-RVNVNLTLANAMLDMYTKCGSIE 284
Query: 509 EAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYA 568
+A+R+ + M + ++ W +L + E A + N Q + V + L + Y
Sbjct: 285 DAKRLFDAME-EKDNVTWTTMLDGYAISEDYEAAREVLNSMPQ---KDIVAWNALISAYE 340
Query: 569 SAGRWEESATV 579
G+ E+ V
Sbjct: 341 QNGKPNEALIV 351
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 163/384 (42%), Gaps = 74/384 (19%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF L+K +S G+SLH + +K+ + +++N Y CG LD+A F
Sbjct: 133 TFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI 192
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+V S+N++I+ V+ +G A+ LFK
Sbjct: 193 KEKDVVSWNSMINGFVQ-------------------------------KGSPDKALELFK 221
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGY------SCYASVCNAVLARY 191
+ + T+ GV+ AC + + L +C Y + ++ NA+L Y
Sbjct: 222 KMESEDVKASHVTMVGVLSACAK----IRNLEFGRQVCSYIEENRVNVNLTLANAMLDMY 277
Query: 192 GGRGLLSEAWRVFHEMGEG-----------------------------CRDEISWNAMIV 222
G + +A R+F M E +D ++WNA+I
Sbjct: 278 TKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALIS 337
Query: 223 ACGQCREGKEALVLFGEM-VRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFN 281
A Q + EAL++F E+ ++ MK++ T+ S L+A + L G H + K G
Sbjct: 338 AYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIR 397
Query: 282 WNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICF 341
N HV S LI MYSKC + +VF + + D+ +W+ MI G + H +A+ F
Sbjct: 398 MNFHVTSALIHMYSKCG--DLEKSREVFNSVEKRDVFVWSAMIGGLAMH-GCGNEAVDMF 454
Query: 342 QDMQRAGFRPDDCSFSCVTSACSN 365
MQ A +P+ +F+ V ACS+
Sbjct: 455 YKMQEANVKPNGVTFTNVFCACSH 478
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 148/330 (44%), Gaps = 13/330 (3%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T +L C R++ G+ + + + + + L+N +Y+KCG++++A+ F
Sbjct: 234 TMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAM 293
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+ ++ ++D ARE+ + +P+ DIV++N LI+A+ G+ A+ +F
Sbjct: 294 EEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFH 353
Query: 138 EAR-EAGLCLDGFTLSGVIKACREDVGLVM--QLHCFAVLCGYSCYASVCNAVLARYGGR 194
E + + + L+ TL + AC + L + +H + G V +A++ Y
Sbjct: 354 ELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKC 413
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
G L ++ VF+ + + RD W+AMI G EA+ +F +M +K + T +
Sbjct: 414 GDLEKSREVFNSVEK--RDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTN 471
Query: 255 VLTA--FTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD-CMKVFEE 311
V A T L D A + FH G + ++D+ + G L+ +K E
Sbjct: 472 VFCACSHTGLVDEAESL-FHQMESNYGIVPEEKHYACIVDVLGR---SGYLEKAVKFIEA 527
Query: 312 IS-EPDLVLWNTMISGFSQHEDLSEDALIC 340
+ P +W ++ H +L+ + C
Sbjct: 528 MPIPPSTSVWGALLGACKIHANLNLAEMAC 557
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 437 bits (1123), Expect = e-122, Method: Compositional matrix adjust.
Identities = 255/666 (38%), Positives = 373/666 (56%), Gaps = 22/666 (3%)
Query: 67 LDNARTSFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHR 126
+D AR F +P+V Y +I + + L A LFDE+P D+VS+N++I+
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVEC 110
Query: 127 GEHGPAVRLFKEAREAGLCLDGFTLSGVIKACREDVG--LVMQLHCFAVLCGYSCYASVC 184
G+ AV+LF E E + ++G ++ + D L Q+ +
Sbjct: 111 GDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKD--------TAAW 162
Query: 185 NAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMG 244
N+++ Y G + +A ++F +M ++ ISW MI Q EAL LF M+R
Sbjct: 163 NSMVHGYLQFGKVDDALKLFKQMPG--KNVISWTTMICGLDQNERSGEALDLFKNMLRCC 220
Query: 245 MKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD 304
+K V+TA G+Q HG +IK GF + +V + LI Y+ C G D
Sbjct: 221 IKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIG--D 278
Query: 305 CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACS 364
KVF+E + +W ++SG+S ++ EDAL F M R P+ +F+ ++CS
Sbjct: 279 SRKVFDEKVHEQVAVWTALLSGYSLNKK-HEDALSIFSGMLRNSILPNQSTFASGLNSCS 337
Query: 365 NLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLN 424
L + GK++H +A+K + ++ V N+LV MYS GN++DA VF + + + VS N
Sbjct: 338 ALGTLDWGKEMHGVAVKLGLETDAF-VGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWN 396
Query: 425 SMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEK 484
S+I G AQHG + +F M++ + P+ ITF +LSAC+H G +E+G+K F M
Sbjct: 397 SIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSG 456
Query: 485 FG-IEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAV 543
I+ + +H++CMVD+LGR GKL+EAE +IE M P + W ALL ACR H +V+
Sbjct: 457 INHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGE 516
Query: 544 KAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKV 603
KAA L+ ++ YV+LSN+YASAGRW + ++ M++ G+ KKPG SW+ I K
Sbjct: 517 KAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKK 576
Query: 604 HVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSE 663
H F + D P I+E + + K+K+ GY PD R AL DV E+KE L YHSE
Sbjct: 577 HEFFSGD--QPHCSRIYEKLEFLREKLKELGYAPDYRSAL---HDVEDEQKEEMLWYHSE 631
Query: 664 KLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHC 723
+LA+AFGLI+T EG + V+KNLR+C DCH IKLIS + GREI +RD RFH FK G C
Sbjct: 632 RLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTC 691
Query: 724 SCKDYW 729
SC DYW
Sbjct: 692 SCGDYW 697
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/468 (21%), Positives = 206/468 (44%), Gaps = 58/468 (12%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTF--IPHSTYLSNHFTLLYSKC---GTLDNART 72
++ +++ C+ D++T +K F +P + +S +T + + C G +D A
Sbjct: 99 SWNSMISGCVECGDMNTA-------VKLFDEMPERSVVS--WTAMVNGCFRSGKVDQAER 149
Query: 73 SFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPA 132
F + ++N+++ ++ + A +LF ++P +++S+ T+I G A
Sbjct: 150 LFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEA 209
Query: 133 VRLFKEAREAGLCLDGFTLSGVIKACREDVGLVM--QLHCFAVLCGYSCYASVCNAVLAR 190
+ LFK + + VI AC M Q+H + G+ V +++
Sbjct: 210 LDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITF 269
Query: 191 YGGRGLLSEAWRVFHEMGEGCRDEIS-WNAMIVACGQCREGKEALVLFGEMVRMGMKIDM 249
Y + ++ +VF E ++++ W A++ ++ ++AL +F M+R + +
Sbjct: 270 YANCKRIGDSRKVFD---EKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQ 326
Query: 250 FTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVF 309
T AS L + + L L G + HG +K G + VG+ L+ MYS + D + VF
Sbjct: 327 STFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSG--NVNDAVSVF 384
Query: 310 EEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSP 369
+I + +V WN++I G +QH + A + F M R PD+ +F+ + SACS+
Sbjct: 385 IKIFKKSIVSWNSIIVGCAQH-GRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFL 443
Query: 370 SLGKQV-HALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMIT 428
G+++ + ++ + ++ +V + +CG L +A + + M
Sbjct: 444 EKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMV------------ 491
Query: 429 GYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQK 476
+ PN + ++++LSAC V+ G+K
Sbjct: 492 ----------------------VKPNEMVWLALLSACRMHSDVDRGEK 517
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 18/192 (9%)
Query: 372 GKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYA 431
GK + ++ + + V + N L++ + +AR VF+ +P + MITGY
Sbjct: 23 GKCYRSFSVTVEFQNREVLICNHLLSR-----RIDEAREVFNQVPSPHVSLYTKMITGYT 77
Query: 432 QHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEA 491
+ ++L LF+ M D+V N S++S C G + K F+ M E+ +
Sbjct: 78 RSNRLVDALNLFDEMPVRDVVSWN----SMISGCVECGDMNTAVKLFDEMPERSVVS--- 130
Query: 492 KHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ 551
++ MV+ R+GK+++AER+ MP + W +++ + G V+ A+K F Q
Sbjct: 131 --WTAMVNGCFRSGKVDQAERLFYQMPVKD-TAAWNSMVHGYLQFGKVDDALKL---FKQ 184
Query: 552 LEPHNAVPYVML 563
+ N + + +
Sbjct: 185 MPGKNVISWTTM 196
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 434 bits (1116), Expect = e-122, Method: Compositional matrix adjust.
Identities = 261/732 (35%), Positives = 409/732 (55%), Gaps = 57/732 (7%)
Query: 46 FIPHST-----YLSNHFTL-LYSKCGTLDNART----SFRLTNNPNVFSYNAIIDACVKH 95
F+P S+ + NH +L L C TL + R ++ + ++ + +I+ C+
Sbjct: 19 FLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILS 78
Query: 96 SH---LHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLS 152
H L A +F I P+++ +NT+ HA + A++L+ GL + +T
Sbjct: 79 PHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFP 138
Query: 153 GVIKAC---------REDVGLVMQLHCFAVLCGYSCYASV-------------------- 183
V+K+C ++ G V++L C L ++ S+
Sbjct: 139 FVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR 198
Query: 184 ----CNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGE 239
A++ Y RG + A ++F E+ +D +SWNAMI + KEAL LF +
Sbjct: 199 DVVSYTALIKGYASRGYIENAQKLFDEI--PVKDVVSWNAMISGYAETGNYKEALELFKD 256
Query: 240 MVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAP 299
M++ ++ D TM +V++A + G Q H + GF N + + LID+YSKC
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKC-- 314
Query: 300 RGMLDCM-KVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSC 358
G L+ +FE + D++ WNT+I G++ H +L ++AL+ FQ+M R+G P+D +
Sbjct: 315 -GELETACGLFERLPYKDVISWNTLIGGYT-HMNLYKEALLLFQEMLRSGETPNDVTMLS 372
Query: 359 VTSACSNLSSPSLGKQVHALAIKS-DIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPE 417
+ AC++L + +G+ +H K +N S+ +L+ MY+KCG++ A +VF+++
Sbjct: 373 ILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILH 432
Query: 418 HNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKY 477
+ S N+MI G+A HG S LF M + I P++ITF+ +LSAC+H+G ++ G+
Sbjct: 433 KSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
Query: 478 FNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHG 537
F M + + + P+ +H+ CM+DLLG +G +EAE +I M +P + W +LL AC+ HG
Sbjct: 493 FRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHG 552
Query: 538 NVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWI 597
NVEL A +++EP N YV+LSN+YASAGRW E A + L+ ++G+KK PGCS I
Sbjct: 553 NVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSI 612
Query: 598 QIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERR 657
+ID+ VH F+ D HP +EI+ + EM +++AG+VPD L + E+ E KE
Sbjct: 613 EIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEE---EWKEGA 669
Query: 658 LLYHSEKLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHC 717
L +HSEKLA+AFGLISTK G + +VKNLR+C +CH A KLIS I REI RD RFH
Sbjct: 670 LRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHH 729
Query: 718 FKEGHCSCKDYW 729
F++G CSC DYW
Sbjct: 730 FRDGVCSCNDYW 741
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 175/362 (48%), Gaps = 9/362 (2%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF +LK C + G+ +H +K Y+ +Y + G L++A F +
Sbjct: 136 TFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKS 195
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+ +V SY A+I ++ A++LFDEIP D+VS+N +I+ +A G + A+ LFK
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 138 EAREAGLCLDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
+ + + D T+ V+ AC + + L Q+H + G+ + NA++ Y G
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 315
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
L A +F + +D ISWN +I KEAL+LF EM+R G + TM S+
Sbjct: 316 ELETACGLFERLPY--KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 373
Query: 256 LTAFTCLEDLAGGMQFHGRMIK--SGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEIS 313
L A L + G H + K G + + LIDMY+KC + +VF I
Sbjct: 374 LPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCG--DIEAAHQVFNSIL 431
Query: 314 EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGK 373
L WN MI GF+ H ++ + F M++ G +PDD +F + SACS+ LG+
Sbjct: 432 HKSLSSWNAMIFGFAMH-GRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 490
Query: 374 QV 375
+
Sbjct: 491 HI 492
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 433 bits (1114), Expect = e-121, Method: Compositional matrix adjust.
Identities = 243/638 (38%), Positives = 358/638 (56%), Gaps = 53/638 (8%)
Query: 101 ARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACRE 160
AR++FDEIP +++ N +I ++ + G +G V++F + D +T V+KAC
Sbjct: 93 ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSC 152
Query: 161 DVGLVM--QLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWN 218
+V+ ++H A G S V N +++ YG G LSEA V EM RD +SWN
Sbjct: 153 SGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR--RDVVSWN 210
Query: 219 AMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAF--TCLEDLAGGMQFHGRMI 276
+++V Q + +AL + EM + + D TMAS+L A T E++
Sbjct: 211 SLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV----------- 259
Query: 277 KSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSED 336
MY K +F ++ + LV WN MI G + +
Sbjct: 260 ----------------MYVK----------DMFFKMGKKSLVSWNVMI-GVYMKNAMPVE 292
Query: 337 ALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALV 396
A+ + M+ GF PD S + V AC + S+ SLGK++H + + N + + NAL+
Sbjct: 293 AVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL-LENALI 351
Query: 397 AMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNI 456
MY+KCG L AR VF+ M + VS +MI+ Y G +++ LF + +VP++I
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411
Query: 457 TFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIET 516
F++ L+AC+H G +EEG+ F +M + + I P +H +CMVDLLGRAGK++EA R I+
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQD 471
Query: 517 MPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEES 576
M +P W ALLGACR H + ++ + AA+K QL P + YV+LSN+YA AGRWEE
Sbjct: 472 MSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEV 531
Query: 577 ATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYV 636
++ +M+ +G+KK PG S ++++ +H F+ D SHP EI+ + +++KMK+ GYV
Sbjct: 532 TNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYV 591
Query: 637 PDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKE-----GVPILVVKNLRICGD 691
PD AL DV E+KE L HSEKLA+ F L++TKE I + KNLRICGD
Sbjct: 592 PDSESAL---HDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGD 648
Query: 692 CHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
CH A KLIS I+ REI +RD +RFH F+ G CSC DYW
Sbjct: 649 CHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 158/347 (45%), Gaps = 20/347 (5%)
Query: 249 MFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKV 308
+F + VL + D+ H R+I N +G L+ Y+ + + + KV
Sbjct: 42 VFLLGQVLDTYP---DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYA--SLKDVASARKV 96
Query: 309 FEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSS 368
F+EI E ++++ N MI + + E + F M RPD +F CV ACS +
Sbjct: 97 FDEIPERNVIIINVMIRSYVNNGFYGEGVKV-FGTMCGCNVRPDHYTFPCVLKACSCSGT 155
Query: 369 PSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMIT 428
+G+++H A K + S + V N LV+MY KCG L +AR V D M + VS NS++
Sbjct: 156 IVIGRKIHGSATKVGLSST-LFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVV 214
Query: 429 GYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIE 488
GYAQ+ ++L++ M I + T S+L A ++T E Y M K G +
Sbjct: 215 GYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMG-K 271
Query: 489 PEAKHFSCMVDLLGRAGKLEEAERIIETMP---FDPGSIEWAALLGACRKHGNVELAVKA 545
++ M+ + + EA + M F+P ++ ++L AC + L K
Sbjct: 272 KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKI 331
Query: 546 ANKFLQLEPHNAVPYVMLSN----MYASAGRWEESATVKRLMRERGV 588
+E +P ++L N MYA G E++ V M+ R V
Sbjct: 332 HG---YIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV 375
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 4/148 (2%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEA 139
PN+ NA+ID K L AR++F+ + D+VS+ +I+A+ G AV LF +
Sbjct: 342 PNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKL 401
Query: 140 REAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCN--AVLARYGGR-GL 196
+++GL D + AC L CF ++ + A + GR G
Sbjct: 402 QDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGK 461
Query: 197 LSEAWRVFHEMGEGCRDEISWNAMIVAC 224
+ EA+R +M + + W A++ AC
Sbjct: 462 VKEAYRFIQDMSMEPNERV-WGALLGAC 488
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/604 (38%), Positives = 363/604 (60%), Gaps = 24/604 (3%)
Query: 132 AVRLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLC------GYSCYASVCN 185
A++ + GL D T S +IK C + + H ++C G+ + N
Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAV----HEGNLICRHLYFNGHRPMMFLVN 100
Query: 186 AVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGM 245
++ Y LL++A ++F +M + R+ ISW MI A +C+ ++AL L M+R +
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQ--RNVISWTTMISAYSKCKIHQKALELLVLMLRDNV 158
Query: 246 KIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDC 305
+ +++T +SVL + + D+ H +IK G + V S LID+++K D
Sbjct: 159 RPNVYTYSSVLRSCNGMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPE--DA 213
Query: 306 MKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSN 365
+ VF+E+ D ++WN++I GF+Q+ S+ AL F+ M+RAGF + + + V AC+
Sbjct: 214 LSVFDEMVTGDAIVWNSIIGGFAQNSR-SDVALELFKRMKRAGFIAEQATLTSVLRACTG 272
Query: 366 LSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNS 425
L+ LG Q H +K D + +NNALV MY KCG+L DA RVF+ M E + ++ ++
Sbjct: 273 LALLELGMQAHVHIVKYD---QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWST 329
Query: 426 MITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKF 485
MI+G AQ+G E+L+LFE M PN IT + VL AC+H G +E+G YF MK+ +
Sbjct: 330 MISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLY 389
Query: 486 GIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKA 545
GI+P +H+ CM+DLLG+AGKL++A +++ M +P ++ W LLGACR N+ LA A
Sbjct: 390 GIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYA 449
Query: 546 ANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHV 605
A K + L+P +A Y +LSN+YA++ +W+ ++ MR+RG+KK+PGCSWI+++ ++H
Sbjct: 450 AKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHA 509
Query: 606 FVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKL 665
F+ D+SHP I E+ + + +++ ++ GYVP+ + L +D+ E+ E L +HSEKL
Sbjct: 510 FIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVL---QDLEGEQMEDSLRHHSEKL 566
Query: 666 AVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSC 725
A+AFGL++ I + KNLRICGDCH KL S + R I +RD R+H F++G CSC
Sbjct: 567 ALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSC 626
Query: 726 KDYW 729
DYW
Sbjct: 627 GDYW 630
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 170/348 (48%), Gaps = 39/348 (11%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T++ L+K CIS R + G I Y + H
Sbjct: 63 TYSELIKCCISNRAVHEG---------NLICRHLYFNGH--------------------- 92
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
P +F N +I+ VK + L+ A +LFD++P+ +++S+ T+I+A++ H A+ L
Sbjct: 93 -RPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLV 151
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLL 197
+ + +T S V+++C + V LHC + G V +A++ + G
Sbjct: 152 LMLRDNVRPNVYTYSSVLRSC-NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEP 210
Query: 198 SEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLT 257
+A VF EM G D I WN++I Q AL LF M R G + T+ SVL
Sbjct: 211 EDALSVFDEMVTG--DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLR 268
Query: 258 AFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDL 317
A T L L GMQ H ++K ++ + + + L+DMY KC + D ++VF ++ E D+
Sbjct: 269 ACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCG--SLEDALRVFNQMKERDV 324
Query: 318 VLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSN 365
+ W+TMISG +Q+ S++AL F+ M+ +G +P+ + V ACS+
Sbjct: 325 ITWSTMISGLAQN-GYSQEALKLFERMKSSGTKPNYITIVGVLFACSH 371
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 119/250 (47%), Gaps = 10/250 (4%)
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
+VF +A+ID K A +FDE+ D + +N++I A A+ LFK +
Sbjct: 193 DVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMK 252
Query: 141 EAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEA 200
AG + TL+ V++AC L + + + Y + NA++ Y G L +A
Sbjct: 253 RAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDA 312
Query: 201 WRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFT 260
RVF++M E RD I+W+ MI Q +EAL LF M G K + T+ VL A +
Sbjct: 313 LRVFNQMKE--RDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACS 370
Query: 261 CLEDLAGGMQFHGRMIKSGFNWNP---HVGSGLIDMYSKCAPRGMLDCMKVFEEIS-EPD 316
L G ++ R +K + +P H G +ID+ K + D +K+ E+ EPD
Sbjct: 371 HAGLLEDGW-YYFRSMKKLYGIDPVREHYGC-MIDLLGKAGK--LDDAVKLLNEMECEPD 426
Query: 317 LVLWNTMISG 326
V W T++
Sbjct: 427 AVTWRTLLGA 436
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/565 (41%), Positives = 343/565 (60%), Gaps = 11/565 (1%)
Query: 167 QLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQ 226
++H + Y + +L YG L +A +V EM E ++ +SW AMI Q
Sbjct: 73 RVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPE--KNVVSWTAMISRYSQ 130
Query: 227 CREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHV 286
EAL +F EM+R K + FT A+VLT+ L G Q HG ++K ++ + V
Sbjct: 131 TGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFV 190
Query: 287 GSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQR 346
GS L+DMY+K + + ++FE + E D+V +I+G++Q L E+AL F +
Sbjct: 191 GSSLLDMYAKAGQ--IKEAREIFECLPERDVVSCTAIIAGYAQ-LGLDEEALEMFHRLHS 247
Query: 347 AGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLH 406
G P+ +++ + +A S L+ GKQ H ++ ++P V + N+L+ MYSKCGNL
Sbjct: 248 EGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAV-LQNSLIDMYSKCGNLS 306
Query: 407 DARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIV-PNNITFISVLSAC 465
ARR+FD MPE +S N+M+ GY++HG+ E L+LF LM E V P+ +T ++VLS C
Sbjct: 307 YARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGC 366
Query: 466 AHTGKVEEGQKYFN-MMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSI 524
+H + G F+ M+ ++G +P +H+ C+VD+LGRAG+++EA I+ MP P +
Sbjct: 367 SHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAG 426
Query: 525 EWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMR 584
+LLGACR H +V++ + +++EP NA YV+LSN+YASAGRW + V+ +M
Sbjct: 427 VLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMM 486
Query: 585 ERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALG 644
++ V K+PG SWIQ + +H F A D +HP +E+ M E+ KMKQAGYVPD+ L
Sbjct: 487 QKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVL- 545
Query: 645 KDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISG 704
DV E+KE+ LL HSEKLA+ FGLI+T EG+PI V KNLRIC DCHN K+ S +
Sbjct: 546 --YDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFE 603
Query: 705 REITVRDAHRFHCFKEGHCSCKDYW 729
RE+++RD +RFH +G CSC DYW
Sbjct: 604 REVSLRDKNRFHQIVDGICSCGDYW 628
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 174/314 (55%), Gaps = 13/314 (4%)
Query: 227 CREGK--EALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNP 284
C G+ EAL+ EM +G ++ ++L A L G + H MIK+ +
Sbjct: 31 CSNGRLQEALL---EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPAT 87
Query: 285 HVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDM 344
++ + L+ Y KC + D KV +E+ E ++V W MIS +SQ SE AL F +M
Sbjct: 88 YLRTRLLIFYGKCD--CLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSE-ALTVFAEM 144
Query: 345 QRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGN 404
R+ +P++ +F+ V ++C S LGKQ+H L +K + S+ + V ++L+ MY+K G
Sbjct: 145 MRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSH-IFVGSSLLDMYAKAGQ 203
Query: 405 LHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSA 464
+ +AR +F+ +PE + VS ++I GYAQ G++ E+L++F + E + PN +T+ S+L+A
Sbjct: 204 IKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTA 263
Query: 465 CAHTGKVEEG-QKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGS 523
+ ++ G Q + ++++ + + + ++D+ + G L A R+ + MP + +
Sbjct: 264 LSGLALLDHGKQAHCHVLRRELPFYAVLQ--NSLIDMYSKCGNLSYARRLFDNMP-ERTA 320
Query: 524 IEWAALLGACRKHG 537
I W A+L KHG
Sbjct: 321 ISWNAMLVGYSKHG 334
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 182/415 (43%), Gaps = 40/415 (9%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTN 78
+ LL C+ +R + G+ +HA IKT +TYL + Y KC L++AR
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDAR------- 107
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
++ DE+P ++VS+ +I+ ++ G A+ +F E
Sbjct: 108 ------------------------KVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAE 143
Query: 139 AREAGLCLDGFTLSGVIKAC--REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGL 196
+ + FT + V+ +C +GL Q+H V Y + V +++L Y G
Sbjct: 144 MMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ 203
Query: 197 LSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVL 256
+ EA +F + E RD +S A+I Q +EAL +F + GM + T AS+L
Sbjct: 204 IKEAREIFECLPE--RDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLL 261
Query: 257 TAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPD 316
TA + L L G Q H +++ + + + LIDMYSKC + ++F+ + E
Sbjct: 262 TALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCG--NLSYARRLFDNMPERT 319
Query: 317 LVLWNTMISGFSQHEDLSEDALICFQDMQ-RAGFRPDDCSFSCVTSACSNLSSPSLGKQV 375
+ WN M+ G+S+H L + L F+ M+ +PD + V S CS+ G +
Sbjct: 320 AISWNAMLVGYSKH-GLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNI 378
Query: 376 HALAIKSDIPSNRVSVN-NALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITG 429
+ + + + + +V M + G + +A MP T + + G
Sbjct: 379 FDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLG 433
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 253/717 (35%), Positives = 392/717 (54%), Gaps = 53/717 (7%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF ++LK C R + G +H L +K Y++ LYS+ + NAR
Sbjct: 155 TFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARI----- 206
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
LFDE+P D+ S+N +I+ + G A+ L
Sbjct: 207 --------------------------LFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSN 240
Query: 138 EAREAGLCLDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
R +D T+ ++ AC E D + +H +++ G V N ++ Y G
Sbjct: 241 GLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFG 296
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
L + +VF M RD ISWN++I A + A+ LF EM ++ D T+ S+
Sbjct: 297 RLRDCQKVFDRMY--VRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISL 354
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSG-FNWNPHVGSGLIDMYSKCAPRGMLDCMK-VFEEIS 313
+ + L D+ G ++ G F + +G+ ++ MY+K G++D + VF +
Sbjct: 355 ASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKL---GLVDSARAVFNWLP 411
Query: 314 EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAG-FRPDDCSFSCVTSACSNLSSPSLG 372
D++ WNT+ISG++Q+ SE A+ + M+ G + ++ V ACS + G
Sbjct: 412 NTDVISWNTIISGYAQNGFASE-AIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG 470
Query: 373 KQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQ 432
++H +K+ + + V V +L MY KCG L DA +F +P N+V N++I +
Sbjct: 471 MKLHGRLLKNGLYLD-VFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGF 529
Query: 433 HGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAK 492
HG +++ LF+ M+ E + P++ITF+++LSAC+H+G V+EGQ F MM+ +GI P K
Sbjct: 530 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLK 589
Query: 493 HFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQL 552
H+ CMVD+ GRAG+LE A + I++M P + W ALL ACR HGNV+L A+ ++
Sbjct: 590 HYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEV 649
Query: 553 EPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSS 612
EP + +V+LSNMYASAG+WE ++ + +G++K PG S +++DNKV VF + +
Sbjct: 650 EPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQT 709
Query: 613 HPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLI 672
HPM +E++ + + K+K GYVPD R+ L +DV +EKE L+ HSE+LA+AF LI
Sbjct: 710 HPMYEEMYRELTALQAKLKMIGYVPDHRFVL---QDVEDDEKEHILMSHSERLAIAFALI 766
Query: 673 STKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
+T I + KNLR+CGDCH+ K IS I+ REI VRD++RFH FK G CSC DYW
Sbjct: 767 ATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 139/469 (29%), Positives = 231/469 (49%), Gaps = 16/469 (3%)
Query: 100 LARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE-AREAGLCLDGFTLSGVIKAC 158
LAR FD I D+ ++N +I+ + G +R F +GL D T V+KAC
Sbjct: 104 LARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC 163
Query: 159 REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWN 218
R + ++HC A+ G+ V +++ Y + A +F EM RD SWN
Sbjct: 164 RTVID-GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEM--PVRDMGSWN 220
Query: 219 AMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKS 278
AMI Q KEAL L + M D T+ S+L+A T D G+ H IK
Sbjct: 221 AMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKH 276
Query: 279 GFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDAL 338
G V + LID+Y++ + DC KVF+ + DL+ WN++I + +E A+
Sbjct: 277 GLESELFVSNKLIDLYAEFGR--LRDCQKVFDRMYVRDLISWNSIIKAYELNEQ-PLRAI 333
Query: 339 ICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAM 398
FQ+M+ + +PD + + S S L + V ++ +++ NA+V M
Sbjct: 334 SLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVM 393
Query: 399 YSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQE-DIVPNNIT 457
Y+K G + AR VF+ +P + +S N++I+GYAQ+G E+++++ +M +E +I N T
Sbjct: 394 YAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGT 453
Query: 458 FISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETM 517
++SVL AC+ G + +G K + K G+ + + + D+ G+ G+LE+A + +
Sbjct: 454 WVSVLPACSQAGALRQGMKLHGRLL-KNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQI 512
Query: 518 PFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ--LEPHNAVPYVMLS 564
P S+ W L+ HG+ E AV + L ++P + +LS
Sbjct: 513 P-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 15/231 (6%)
Query: 363 CSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVS 422
C+NL S K +HA + S N V ++ LV +Y GN+ AR FD + + +
Sbjct: 64 CTNLQS---AKCLHARLVVSKQIQN-VCISAKLVNLYCYLGNVALARHTFDHIQNRDVYA 119
Query: 423 LNSMITGYAQHGVEGESLQLFEL-MMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMM 481
N MI+GY + G E ++ F L M+ + P+ TF SVL AC V +G K + +
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNK-IHCL 175
Query: 482 KEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPF-DPGSIEWAALLGACRKHGNVE 540
KFG + + ++ L R + A + + MP D GS W A++ + GN +
Sbjct: 176 ALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS--WNAMISGYCQSGNAK 233
Query: 541 LAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKK 591
A+ +N L ++V V L + AG + T+ + G++ +
Sbjct: 234 EALTLSNG---LRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESE 281
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 427 bits (1099), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/550 (41%), Positives = 339/550 (61%), Gaps = 11/550 (2%)
Query: 181 ASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEM 240
++ N ++ Y G + A +VF M E R +SWN MI + R EAL +F EM
Sbjct: 96 VTLLNVLINAYSKCGFVELARQVFDGMLE--RSLVSWNTMIGLYTRNRMESEALDIFLEM 153
Query: 241 VRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPR 300
G K FT++SVL+A D + H +K+ + N +VG+ L+D+Y+KC
Sbjct: 154 RNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKC--- 210
Query: 301 GML-DCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCV 359
GM+ D ++VFE + + V W++M++G+ Q+++ E+AL+ ++ QR + + S V
Sbjct: 211 GMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNY-EEALLLYRRAQRMSLEQNQFTLSSV 269
Query: 360 TSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHN 419
ACSNL++ GKQ+HA+ KS SN V V ++ V MY+KCG+L ++ +F + E N
Sbjct: 270 ICACSNLAALIEGKQMHAVICKSGFGSN-VFVASSAVDMYAKCGSLRESYIIFSEVQEKN 328
Query: 420 TVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFN 479
N++I+G+A+H E + LFE M Q+ + PN +TF S+LS C HTG VEEG+++F
Sbjct: 329 LELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFK 388
Query: 480 MMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNV 539
+M+ +G+ P H+SCMVD+LGRAG L EA +I+++PFDP + W +LL +CR + N+
Sbjct: 389 LMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNL 448
Query: 540 ELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQI 599
ELA AA K +LEP NA +V+LSN+YA+ +WEE A ++L+R+ VKK G SWI I
Sbjct: 449 ELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDI 508
Query: 600 DNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLL 659
+KVH F +S HP I+EI + ++ K ++ GY P + L DV +KE L+
Sbjct: 509 KDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHEL---HDVEIGKKEELLM 565
Query: 660 YHSEKLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFK 719
HSEKLA+ FGL+ E P+ ++KNLRIC DCH +K S + R I VRD +RFH F
Sbjct: 566 QHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFS 625
Query: 720 EGHCSCKDYW 729
+GHCSC D+W
Sbjct: 626 DGHCSCGDFW 635
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 181/352 (51%), Gaps = 7/352 (1%)
Query: 74 FRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAV 133
R+ +V N +I+A K + LAR++FD + +VS+NT+I + A+
Sbjct: 88 IRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEAL 147
Query: 134 RLFKEAREAGLCLDGFTLSGVIKACREDVGLV--MQLHCFAVLCGYSCYASVCNAVLARY 191
+F E R G FT+S V+ AC + + +LHC +V V A+L Y
Sbjct: 148 DIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLY 207
Query: 192 GGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFT 251
G++ +A +VF M + + ++W++M+ Q + +EAL+L+ RM ++ + FT
Sbjct: 208 AKCGMIKDAVQVFESMQD--KSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFT 265
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEE 311
++SV+ A + L L G Q H + KSGF N V S +DMY+KC + + +F E
Sbjct: 266 LSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCG--SLRESYIIFSE 323
Query: 312 ISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSL 371
+ E +L LWNT+ISGF++H ++ +I F+ MQ+ G P++ +FS + S C +
Sbjct: 324 VQEKNLELWNTIISGFAKHAR-PKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEE 382
Query: 372 GKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSL 423
G++ L + S V + +V + + G L +A + ++P T S+
Sbjct: 383 GRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASI 434
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 158/317 (49%), Gaps = 13/317 (4%)
Query: 272 HGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMK-VFEEISEPDLVLWNTMISGFSQH 330
HG++I+ + + + LI+ YSKC G ++ + VF+ + E LV WNTMI G
Sbjct: 84 HGKIIRIDLEGDVTLLNVLINAYSKC---GFVELARQVFDGMLERSLVSWNTMI-GLYTR 139
Query: 331 EDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVS 390
+ +AL F +M+ GF+ + + S V SAC K++H L++K+ I N +
Sbjct: 140 NRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLN-LY 198
Query: 391 VNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQED 450
V AL+ +Y+KCG + DA +VF++M + ++V+ +SM+ GY Q+ E+L L+ +
Sbjct: 199 VGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMS 258
Query: 451 IVPNNITFISVLSACAHTGKVEEGQKYFNMM-KEKFGIEPEAKHFSCMVDLLGRAGKLEE 509
+ N T SV+ AC++ + EG++ ++ K FG S VD+ + G L E
Sbjct: 259 LEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVA--SSAVDMYAKCGSLRE 316
Query: 510 AERIIETMPFDPGSIE-WAALLGACRKHGNVELAVKAANKFLQLEPH-NAVPYVMLSNMY 567
+ I + ++E W ++ KH + + K Q H N V + L ++
Sbjct: 317 SYIIFSEV--QEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVC 374
Query: 568 ASAGRWEESATVKRLMR 584
G EE +LMR
Sbjct: 375 GHTGLVEEGRRFFKLMR 391
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 3/172 (1%)
Query: 372 GKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYA 431
K H I+ D+ + V++ N L+ YSKCG + AR+VFD M E + VS N+MI Y
Sbjct: 80 AKACHGKIIRIDLEGD-VTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYT 138
Query: 432 QHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEA 491
++ +E E+L +F M E + T SVLSAC E +K + + K I+
Sbjct: 139 RNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK-LHCLSVKTCIDLNL 197
Query: 492 KHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAV 543
+ ++DL + G +++A ++ E+M D S+ W++++ ++ N E A+
Sbjct: 198 YVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSMVAGYVQNKNYEEAL 248
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T ++++ C + + GK +HA+ K+ + ++++ +Y+KCG+L + F
Sbjct: 265 TLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEV 324
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAV 133
N+ +N II KH+ LF+++ + P+ V++++L++ H G
Sbjct: 325 QEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGR 384
Query: 134 RLFKEAR 140
R FK R
Sbjct: 385 RFFKLMR 391
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 425 bits (1093), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/632 (36%), Positives = 370/632 (58%), Gaps = 13/632 (2%)
Query: 101 ARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKAC-- 158
AR +FDE+ D VSYNT+I + +VR+F E + D T+S V++AC
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGH 319
Query: 159 REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWN 218
D+ L ++ + + G+ ++V N ++ Y G + A VF+ M C+D +SWN
Sbjct: 320 LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME--CKDTVSWN 377
Query: 219 AMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKS 278
++I Q + EA+ LF M+ M + D T +++ T L DL G H IKS
Sbjct: 378 SIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS 437
Query: 279 GFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDAL 338
G + V + LIDMY+KC G D +K+F + D V WNT+IS + D +
Sbjct: 438 GICIDLSVSNALIDMYAKCGEVG--DSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQ 495
Query: 339 ICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAM 398
+ Q M+++ PD +F C++L++ LGK++H ++ S + + NAL+ M
Sbjct: 496 VTTQ-MRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESE-LQIGNALIEM 553
Query: 399 YSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITF 458
YSKCG L ++ RVF+ M + V+ MI Y +G ++L+ F M + IVP+++ F
Sbjct: 554 YSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVF 613
Query: 459 ISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMP 518
I+++ AC+H+G V+EG F MK + I+P +H++C+VDLL R+ K+ +AE I+ MP
Sbjct: 614 IAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMP 673
Query: 519 FDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESAT 578
P + WA++L ACR G++E A + + + ++L P + ++ SN YA+ +W++ +
Sbjct: 674 IKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSL 733
Query: 579 VKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPD 638
+++ ++++ + K PG SWI++ VHVF + D S P + I++ + + M + GY+PD
Sbjct: 734 IRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPD 793
Query: 639 IRWALGKDEDVAAEEKERRLL-YHSEKLAVAFGLISTKEGVPILVVKNLRICGDCHNAIK 697
R +++ EE++RRL+ HSE+LA+AFGL++T+ G P+ V+KNLR+CGDCH K
Sbjct: 794 PREV---SQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTK 850
Query: 698 LISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
LIS I GREI VRDA+RFH FK+G CSCKD W
Sbjct: 851 LISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 152/493 (30%), Positives = 260/493 (52%), Gaps = 18/493 (3%)
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
++F NA++D + L AR++FDE+P D+VS+N+LI+ ++ G + A+ ++ E +
Sbjct: 140 DLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELK 199
Query: 141 EAGLCLDGFTLSGVIKACREDVGLVMQ---LHCFAVLCGYSCYASVCNAVLARYGGRGLL 197
+ + D FT+S V+ A ++ +V Q LH FA+ G + V N ++A Y
Sbjct: 200 NSWIVPDSFTVSSVLPAF-GNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRP 258
Query: 198 SEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLT 257
++A RVF EM RD +S+N MI + +E++ +F E + K D+ T++SVL
Sbjct: 259 TDARRVFDEM--DVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLR 315
Query: 258 AFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDL 317
A L DL+ + M+K+GF V + LID+Y+KC M+ VF + D
Sbjct: 316 ACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCG--DMITARDVFNSMECKDT 373
Query: 318 VLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHA 377
V WN++ISG+ Q DL E A+ F+ M + D ++ + S + L+ GK +H+
Sbjct: 374 VSWNSIISGYIQSGDLME-AMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHS 432
Query: 378 LAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEG 437
IKS I + +SV+NAL+ MY+KCG + D+ ++F +M +TV+ N++I+ + G
Sbjct: 433 NGIKSGICID-LSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFA 491
Query: 438 ESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCM 497
LQ+ M + ++VP+ TF+ L CA G++ + +FG E E + + +
Sbjct: 492 TGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL-RFGYESELQIGNAL 550
Query: 498 VDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNA 557
+++ + G LE + R+ E M + W ++ A +G E KA F +E
Sbjct: 551 IEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGEGE---KALETFADMEKSGI 606
Query: 558 VP--YVMLSNMYA 568
VP V ++ +YA
Sbjct: 607 VPDSVVFIAIIYA 619
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 234/453 (51%), Gaps = 14/453 (3%)
Query: 109 PRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACRE--DVGLVM 166
P ++ +N++I A + G A+ + + RE+ + D +T VIKAC D +
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 167 QLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQ 226
++ + G+ V NA++ Y GLL+ A +VF EM RD +SWN++I
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEM--PVRDLVSWNSLISGYSS 184
Query: 227 CREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHV 286
+EAL ++ E+ + D FT++SVL AF L + G HG +KSG N V
Sbjct: 185 HGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVV 244
Query: 287 GSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQR 346
+GL+ MY K R D +VF+E+ D V +NTMI G+ + E + E + +++ +
Sbjct: 245 NNGLVAMYLKF--RRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ 302
Query: 347 AGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLH 406
F+PD + S V AC +L SL K ++ +K+ +V N L+ +Y+KCG++
Sbjct: 303 --FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLES-TVRNILIDVYAKCGDMI 359
Query: 407 DARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACA 466
AR VF++M +TVS NS+I+GY Q G E+++LF++MM + ++IT++ ++S
Sbjct: 360 TARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVST 419
Query: 467 HTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEW 526
++ G K + K GI + + ++D+ + G++ ++ +I +M ++ W
Sbjct: 420 RLADLKFG-KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG-TGDTVTW 477
Query: 527 AALLGACRKHGNVELAVKAANKFLQLEPHNAVP 559
++ AC + G+ ++ Q+ VP
Sbjct: 478 NTVISACVRFGDFATGLQVTT---QMRKSEVVP 507
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 184/350 (52%), Gaps = 12/350 (3%)
Query: 217 WNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMI 276
WN++I A + EAL +G++ + D +T SV+ A L D G + +++
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133
Query: 277 KSGFNWNPHVGSGLIDMYSKCAPRGMLD-CMKVFEEISEPDLVLWNTMISGFSQHEDLSE 335
GF + VG+ L+DMYS+ G+L +VF+E+ DLV WN++ISG+S H E
Sbjct: 134 DMGFESDLFVGNALVDMYSRM---GLLTRARQVFDEMPVRDLVSWNSLISGYSSH-GYYE 189
Query: 336 DALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNAL 395
+AL + +++ + PD + S V A NL G+ +H A+KS ++ V VNN L
Sbjct: 190 EALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKS-GVNSVVVVNNGL 248
Query: 396 VAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNN 455
VAMY K DARRVFD M ++VS N+MI GY + + ES+++F L + P+
Sbjct: 249 VAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF-LENLDQFKPDL 307
Query: 456 ITFISVLSACAHTGKVEEGQKYFN-MMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERII 514
+T SVL AC H + + +N M+K F +E ++ ++D+ + G + A +
Sbjct: 308 LTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNI--LIDVYAKCGDMITARDVF 365
Query: 515 ETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPH-NAVPYVML 563
+M ++ W +++ + G++ A+K + +E + + Y+ML
Sbjct: 366 NSMEC-KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLML 414
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 5/207 (2%)
Query: 270 QFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEP-DLVLWNTMISGFS 328
+ H +I G + + LID YS R + VF +S ++ LWN++I FS
Sbjct: 25 RIHALVISLGLDSSDFFSGKLIDKYSHF--REPASSLSVFRRVSPAKNVYLWNSIIRAFS 82
Query: 329 QHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNR 388
++ L +AL + ++ + PD +F V AC+ L +G V+ + S+
Sbjct: 83 KN-GLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESD- 140
Query: 389 VSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQ 448
+ V NALV MYS+ G L AR+VFD MP + VS NS+I+GY+ HG E+L+++ +
Sbjct: 141 LFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKN 200
Query: 449 EDIVPNNITFISVLSACAHTGKVEEGQ 475
IVP++ T SVL A + V++GQ
Sbjct: 201 SWIVPDSFTVSSVLPAFGNLLVVKQGQ 227
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 90/187 (48%), Gaps = 4/187 (2%)
Query: 359 VTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTM-PE 417
++ A S+ S+ + +++HAL I + S+ + L+ YS + VF + P
Sbjct: 10 ISRALSSSSNLNELRRIHALVISLGLDSSDF-FSGKLIDKYSHFREPASSLSVFRRVSPA 68
Query: 418 HNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKY 477
N NS+I ++++G+ E+L+ + + + + P+ TF SV+ ACA E G
Sbjct: 69 KNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128
Query: 478 FNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHG 537
+ + + G E + + +VD+ R G L A ++ + MP + W +L+ HG
Sbjct: 129 YEQILD-MGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISGYSSHG 186
Query: 538 NVELAVK 544
E A++
Sbjct: 187 YYEEALE 193
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 259/669 (38%), Positives = 357/669 (53%), Gaps = 87/669 (13%)
Query: 63 KCGTLDNARTSFRLTNNPNVFSYNAIIDACVKH-SHLHLARELFDEIPRPDIVSYNTLIA 121
+ G +D A F N ++N+++ K S + A +LFDEIP PD SYN +++
Sbjct: 73 RSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLS 132
Query: 122 AHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYA 181
+ A F D A
Sbjct: 133 CYVRNVNFEKAQSFF----------DRMPFKD---------------------------A 155
Query: 182 SVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMV 241
+ N ++ Y RG + +A +F+ M E ++E+SWNAMI +C + ++A
Sbjct: 156 ASWNTMITGYARRGEMEKARELFYSMME--KNEVSWNAMISGYIECGDLEKA-------- 205
Query: 242 RMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRG 301
F +A V + W + +I Y K
Sbjct: 206 -----SHFFKVAPV---------------------RGVVAW-----TAMITGYMKAKKVE 234
Query: 302 MLDCMKVFEEIS-EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVT 360
+ + M F++++ +LV WN MISG+ ++ ED L F+ M G RP+ S
Sbjct: 235 LAEAM--FKDMTVNKNLVTWNAMISGYVENSR-PEDGLKLFRAMLEEGIRPNSSGLSSAL 291
Query: 361 SACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNT 420
CS LS+ LG+Q+H + KS + N V+ +L++MY KCG L DA ++F+ M + +
Sbjct: 292 LGCSELSALQLGRQIHQIVSKSTL-CNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDV 350
Query: 421 VSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNM 480
V+ N+MI+GYAQHG ++L LF M+ I P+ ITF++VL AC H G V G YF
Sbjct: 351 VAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFES 410
Query: 481 MKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVE 540
M + +EP+ H++CMVDLLGRAGKLEEA ++I +MPF P + + LLGACR H NVE
Sbjct: 411 MVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVE 470
Query: 541 LAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQID 600
LA AA K LQL NA YV L+N+YAS RWE+ A V++ M+E V K PG SWI+I
Sbjct: 471 LAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIR 530
Query: 601 NKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLY 660
NKVH F + D HP + IH+ + E+ +KMK AGY P++ +AL +V E+KE+ LL+
Sbjct: 531 NKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFAL---HNVEEEQKEKLLLW 587
Query: 661 HSEKLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKE 720
HSEKLAVAFG I +G I V KNLRICGDCH AIK IS I REI VRD RFH FK+
Sbjct: 588 HSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKD 647
Query: 721 GHCSCKDYW 729
G CSC DYW
Sbjct: 648 GSCSCGDYW 656
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 177/399 (44%), Gaps = 15/399 (3%)
Query: 19 FTNLLKQCISQRDISTG-KSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
++ +C+ DI + H + K I ++ L + + A F
Sbjct: 64 LNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIG----ISKDPSRMMEAHQLFDEI 119
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
P+ FSYN ++ V++ + A+ FD +P D S+NT+I +A RGE A LF
Sbjct: 120 PEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFY 179
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLL 197
E +SG I+ D+ A + G + ++ + + L
Sbjct: 180 SMMEKNEVSWNAMISGYIECG--DLEKASHFFKVAPVRGVVAWTAMITGYMK--AKKVEL 235
Query: 198 SEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLT 257
+EA +F +M ++ ++WNAMI + ++ L LF M+ G++ + ++S L
Sbjct: 236 AEA--MFKDMTVN-KNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALL 292
Query: 258 AFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDL 317
+ L L G Q H + KS + + LI MY KC G D K+FE + + D+
Sbjct: 293 GCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELG--DAWKLFEVMKKKDV 350
Query: 318 VLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHA 377
V WN MISG++QH + ++ AL F++M RPD +F V AC++ ++G
Sbjct: 351 VAWNAMISGYAQHGN-ADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFE 409
Query: 378 LAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP 416
++ + +V + + G L +A ++ +MP
Sbjct: 410 SMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMP 448
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 246/651 (37%), Positives = 373/651 (57%), Gaps = 25/651 (3%)
Query: 95 HSHLHLARE----LFDE-IPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGF 149
H+ H R+ LF+ + + D+ S+N++IA A G+ A+ F R+ L
Sbjct: 18 HTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRS 77
Query: 150 TLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEM 207
+ IKAC D+ Q H A + GY V +A++ Y G L +A +VF E+
Sbjct: 78 SFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEI 137
Query: 208 GEGCRDEISWNAMIVACGQCREGKEALVLFGEMV------RMGMKIDMFTMASVLTAFTC 261
+ R+ +SW +MI +A+ LF +++ M +D + SV++A C
Sbjct: 138 PK--RNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISA--C 193
Query: 262 LEDLAGGM--QFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVL 319
A G+ H +IK GF+ VG+ L+D Y+K G+ K+F++I + D V
Sbjct: 194 SRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVS 253
Query: 320 WNTMISGFSQHEDLSEDALICFQDMQRAGFRP-DDCSFSCVTSACSNLSSPSLGKQVHAL 378
+N+++S ++Q +S +A F+ + + + + S V A S+ + +GK +H
Sbjct: 254 YNSIMSVYAQ-SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQ 312
Query: 379 AIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGE 438
I+ + + V V +++ MY KCG + AR+ FD M N S +MI GY HG +
Sbjct: 313 VIRMGLEDD-VIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAK 371
Query: 439 SLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMV 498
+L+LF M+ + PN ITF+SVL+AC+H G EG ++FN MK +FG+EP +H+ CMV
Sbjct: 372 ALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMV 431
Query: 499 DLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAV 558
DLLGRAG L++A +I+ M P SI W++LL ACR H NVELA + + +L+ N
Sbjct: 432 DLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCG 491
Query: 559 PYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKE 618
Y++LS++YA AGRW++ V+ +M+ RG+ K PG S ++++ +VHVF+ D HP ++
Sbjct: 492 YYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREK 551
Query: 619 IHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGV 678
I+E++ E+ RK+ +AGYV + DV EEKE L HSEKLA+AFG+++T G
Sbjct: 552 IYEFLAELNRKLLEAGYVSNTSSVC---HDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGS 608
Query: 679 PILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
+ VVKNLR+C DCHN IKLIS I RE VRDA RFH FK+G CSC DYW
Sbjct: 609 TVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 165/359 (45%), Gaps = 47/359 (13%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
+F +K C S DI +GK H ++S+ ++YS CG L++AR
Sbjct: 78 SFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDAR------ 131
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
++FDEIP+ +IVS+ ++I + G AV LFK
Sbjct: 132 -------------------------KVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFK 166
Query: 138 EA------REAGLCLDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLA 189
+ + + LD L VI AC GL +H F + G+ SV N +L
Sbjct: 167 DLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLD 226
Query: 190 RY--GGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMG-MK 246
Y GG G ++ A ++F ++ + +D +S+N+++ Q EA +F +V+ +
Sbjct: 227 AYAKGGEGGVAVARKIFDQIVD--KDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVT 284
Query: 247 IDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCM 306
+ T+++VL A + L G H ++I+ G + VG+ +IDMY KC +
Sbjct: 285 FNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGR--VETAR 342
Query: 307 KVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSN 365
K F+ + ++ W MI+G+ H ++ AL F M +G RP+ +F V +ACS+
Sbjct: 343 KAFDRMKNKNVRSWTAMIAGYGMHGHAAK-ALELFPAMIDSGVRPNYITFVSVLAACSH 400
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T + +L + GK +H I+ + + +Y KCG ++ AR +F
Sbjct: 289 TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRM 348
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELF----DEIPRPDIVSYNTLIAAHAHRGEHGPAV 133
N NV S+ A+I H H A ELF D RP+ +++ +++AA +H G H
Sbjct: 349 KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGW 408
Query: 134 RLF 136
R F
Sbjct: 409 RWF 411
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 422 bits (1086), Expect = e-118, Method: Compositional matrix adjust.
Identities = 251/719 (34%), Positives = 386/719 (53%), Gaps = 49/719 (6%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T +L C +R+I GK +H +K + L+N +YSKCG + NA+ F++
Sbjct: 294 TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 353
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
NN NV VS+NT++ + G+ + +
Sbjct: 354 NNKNV-------------------------------VSWNTMVGGFSAEGDTHGTFDVLR 382
Query: 138 EAREAG--LCLDGFTLSGVIKACREDVGL--VMQLHCFAVLCGYSCYASVCNAVLARYGG 193
+ G + D T+ + C + L + +LHC+++ + V NA +A Y
Sbjct: 383 QMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAK 442
Query: 194 RGLLSEAWRVFHEMGEGCRDEI--SWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFT 251
G LS A RVFH G R + SWNA+I Q + + +L +M G+ D FT
Sbjct: 443 CGSLSYAQRVFH----GIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFT 498
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEE 311
+ S+L+A + L+ L G + HG +I++ + V ++ +Y C + +F+
Sbjct: 499 VCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE--LCTVQALFDA 556
Query: 312 ISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSL 371
+ + LV WNT+I+G+ Q+ + AL F+ M G + S V ACS L S L
Sbjct: 557 MEDKSLVSWNTVITGYLQN-GFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRL 615
Query: 372 GKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYA 431
G++ HA A+K + + + +L+ MY+K G++ + +VF+ + E +T S N+MI GY
Sbjct: 616 GREAHAYALKH-LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYG 674
Query: 432 QHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEA 491
HG+ E+++LFE M + P+++TF+ VL+AC H+G + EG +Y + MK FG++P
Sbjct: 675 IHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNL 734
Query: 492 KHFSCMVDLLGRAGKLEEAERII-ETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFL 550
KH++C++D+LGRAG+L++A R++ E M + W +LL +CR H N+E+ K A K
Sbjct: 735 KHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLF 794
Query: 551 QLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAED 610
+LEP YV+LSN+YA G+WE+ V++ M E ++K GCSWI+++ KV FV +
Sbjct: 795 ELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGE 854
Query: 611 SSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFG 670
+EI + K+ + GY PD + D++ EEK +L HSEKLA+ +G
Sbjct: 855 RFLDGFEEIKSLWSILEMKISKMGYRPD---TMSVQHDLSEEEKIEQLRGHSEKLALTYG 911
Query: 671 LISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
LI T EG I V KNLRIC DCHNA KLIS + REI VRD RFH FK G CSC DYW
Sbjct: 912 LIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 138/526 (26%), Positives = 240/526 (45%), Gaps = 49/526 (9%)
Query: 22 LLKQCISQRDISTGKSLHALYI-KTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNP 80
LL+ ++DI G+ +H L T + + L +Y+ CG+ D++R F +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
N+F +NA+I + ++ EL+DE+ I +T
Sbjct: 150 NLFQWNAVISSYSRN-------ELYDEVLETFIEMIST---------------------- 180
Query: 141 EAGLCLDGFTLSGVIKAC--REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLS 198
L D FT VIKAC DVG+ + +H V G V NA+++ YG G ++
Sbjct: 181 -TDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVT 239
Query: 199 EAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRM----GMKIDMFTMAS 254
+A ++F M E R+ +SWN+MI +E+ +L GEM+ D+ T+ +
Sbjct: 240 DALQLFDIMPE--RNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 297
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISE 314
VL ++ G HG +K + + + L+DMYSKC + + +F+ +
Sbjct: 298 VLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGC--ITNAQMIFKMNNN 355
Query: 315 PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAG--FRPDDCSFSCVTSACSNLSS-PSL 371
++V WNTM+ GFS D + + M G + D+ + C + S PSL
Sbjct: 356 KNVVSWNTMVGGFSAEGD-THGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL 414
Query: 372 GKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYA 431
K++H ++K + N + V NA VA Y+KCG+L A+RVF + S N++I G+A
Sbjct: 415 -KELHCYSLKQEFVYNEL-VANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHA 472
Query: 432 QHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEA 491
Q SL M ++P++ T S+LSAC+ + G++ + + +E +
Sbjct: 473 QSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW-LERDL 531
Query: 492 KHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHG 537
+ ++ L G+L + + + M D + W ++ ++G
Sbjct: 532 FVYLSVLSLYIHCGELCTVQALFDAME-DKSLVSWNTVITGYLQNG 576
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 183/389 (47%), Gaps = 28/389 (7%)
Query: 183 VCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVR 242
+C ++ Y G ++ VF + ++ WNA+I + + E L F EM+
Sbjct: 122 LCTRIITMYAMCGSPDDSRFVFDALRS--KNLFQWNAVISSYSRNELYDEVLETFIEMIS 179
Query: 243 M-GMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRG 301
+ D FT V+ A + D+ G+ HG ++K+G + VG+ L+ Y G
Sbjct: 180 TTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFY---GTHG 236
Query: 302 ML-DCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAG---FRPDDCSFS 357
+ D +++F+ + E +LV WN+MI FS + E L+ + M+ G F PD +
Sbjct: 237 FVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLV 296
Query: 358 CVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPE 417
V C+ LGK VH A+K + V +NNAL+ MYSKCG + +A+ +F
Sbjct: 297 TVLPVCAREREIGLGKGVHGWAVKLRLDKELV-LNNALMDMYSKCGCITNAQMIFKMNNN 355
Query: 418 HNTVSLNSMITGYAQHGVEGESLQLFELMMQ-----EDIVPNNITFISVLSACAHTGKVE 472
N VS N+M+ G++ EG++ F+++ Q ED+ + +T ++ + C H +
Sbjct: 356 KNVVSWNTMVGGFS---AEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLP 412
Query: 473 EGQKY--FNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALL 530
++ +++ +E E A F V + G L A+R+ + + W AL+
Sbjct: 413 SLKELHCYSLKQEFVYNELVANAF---VASYAKCGSLSYAQRVFHGIRSKTVN-SWNALI 468
Query: 531 GACRKHGNVELAVKAANKFLQLEPHNAVP 559
G + + L++ A LQ++ +P
Sbjct: 469 GGHAQSNDPRLSLDA---HLQMKISGLLP 494
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/569 (40%), Positives = 339/569 (59%), Gaps = 14/569 (2%)
Query: 167 QLHCFAVLCGYSCYASVCNAVLARY----GGRGLLSEAWRVFHEMGEGCRDEISWNAMIV 222
Q+H F++ G S + L Y +S A +VF ++ E + WN +I
Sbjct: 35 QIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKI-EKPINVFIWNTLIR 93
Query: 223 ACGQCREGKEALVLFGEMVRMGM-KIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFN 281
+ A L+ EM G+ + D T ++ A T + D+ G H +I+SGF
Sbjct: 94 GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153
Query: 282 WNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICF 341
+V + L+ +Y+ C + KVF+++ E DLV WN++I+GF+++ E+AL +
Sbjct: 154 SLIYVQNSLLHLYANCG--DVASAYKVFDKMPEKDLVAWNSVINGFAENGK-PEEALALY 210
Query: 342 QDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSK 401
+M G +PD + + SAC+ + + +LGK+VH IK + N S +N L+ +Y++
Sbjct: 211 TEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS-SNVLLDLYAR 269
Query: 402 CGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELM-MQEDIVPNNITFIS 460
CG + +A+ +FD M + N+VS S+I G A +G E+++LF+ M E ++P ITF+
Sbjct: 270 CGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVG 329
Query: 461 VLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFD 520
+L AC+H G V+EG +YF M+E++ IEP +HF CMVDLL RAG++++A I++MP
Sbjct: 330 ILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQ 389
Query: 521 PGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVK 580
P + W LLGAC HG+ +LA A + LQLEP+++ YV+LSNMYAS RW + ++
Sbjct: 390 PNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIR 449
Query: 581 RLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIR 640
+ M GVKK PG S +++ N+VH F+ D SHP I+ + EM +++ GYVP I
Sbjct: 450 KQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQIS 509
Query: 641 WALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLIS 700
DV EEKE ++YHSEK+A+AF LIST E PI VVKNLR+C DCH AIKL+S
Sbjct: 510 NVY---VDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVS 566
Query: 701 AISGREITVRDAHRFHCFKEGHCSCKDYW 729
+ REI VRD RFH FK G CSC+DYW
Sbjct: 567 KVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 174/355 (49%), Gaps = 15/355 (4%)
Query: 101 ARELFDEIPRP-DIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLC-LDGFTLSGVIKAC 158
A ++F +I +P ++ +NTLI +A G A L++E R +GL D T +IKA
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 159 RE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEIS 216
DV L +H + G+ V N++L Y G ++ A++VF +M E +D ++
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE--KDLVA 189
Query: 217 WNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMI 276
WN++I + + +EAL L+ EM G+K D FT+ S+L+A + L G + H MI
Sbjct: 190 WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 249
Query: 277 KSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSED 336
K G N H + L+D+Y++C + + +F+E+ + + V W ++I G + + ++
Sbjct: 250 KVGLTRNLHSSNVLLDLYARCG--RVEEAKTLFDEMVDKNSVSWTSLIVGLAVN-GFGKE 306
Query: 337 ALICFQDMQRA-GFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNAL 395
A+ F+ M+ G P + +F + ACS+ G + + R+ +
Sbjct: 307 AIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCM 366
Query: 396 VAMYSKCGNLHDARRVFDTMP-EHNTVSLNSMITGYAQHG----VEGESLQLFEL 445
V + ++ G + A +MP + N V +++ HG E +Q+ +L
Sbjct: 367 VDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQL 421
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 150/334 (44%), Gaps = 52/334 (15%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T+ L+K + D+ G+++H++ I++ Y+ N LY+ CG + +A
Sbjct: 123 TYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAY------ 176
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
++FD++P D+V++N++I A G+ A+ L+
Sbjct: 177 -------------------------KVFDKMPEKDLVAWNSVINGFAENGKPEEALALYT 211
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVM--QLHCFAVLCGYSCYASVCNAVLARYGGRG 195
E G+ DGFT+ ++ AC + L + ++H + + G + N +L Y G
Sbjct: 212 EMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCG 271
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRM-GMKIDMFTMAS 254
+ EA +F EM + ++ +SW ++IV GKEA+ LF M G+ T
Sbjct: 272 RVEEAKTLFDEMVD--KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVG 329
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNP---HVGSGLIDMYSKCAPRGMLDCMKVFEE 311
+L A + + G ++ RM + + P H G ++D+ ++ K +E
Sbjct: 330 ILYACSHCGMVKEGFEYFRRM-REEYKIEPRIEHFGC-MVDLLARAG-----QVKKAYEY 382
Query: 312 IS----EPDLVLWNTMISGFSQH--EDLSEDALI 339
I +P++V+W T++ + H DL+E A I
Sbjct: 383 IKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARI 416
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/664 (35%), Positives = 380/664 (57%), Gaps = 29/664 (4%)
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
N+ + N +ID K +A ++FD +P ++VS++ L++ H G+ ++ LF E
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 141 EAGLCLDGFTLSGVIKACREDVGLV------MQLHCFAVLCGYSCYASVCNAVLARYGGR 194
G+ + FT S +KAC GL+ +Q+H F + G+ V N+++ Y
Sbjct: 100 RQGIYPNEFTFSTNLKAC----GLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKC 155
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMK--IDMFTM 252
G ++EA +VF + + R ISWNAMI G +AL FG M +K D FT+
Sbjct: 156 GRINEAEKVFRRIVD--RSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTL 213
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSGFN--WNPHVGSGLIDMYSKCAPRGMLDCMKVFE 310
S+L A + + G Q HG +++SGF+ + + L+D+Y KC + K F+
Sbjct: 214 TSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGY--LFSARKAFD 271
Query: 311 EISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPS 370
+I E ++ W+++I G++Q + E A+ F+ +Q + D + S + ++ +
Sbjct: 272 QIKEKTMISWSSLILGYAQEGEFVE-AMGLFKRLQELNSQIDSFALSSIIGVFADFALLR 330
Query: 371 LGKQVHALAIKSDIPSN-RVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITG 429
GKQ+ ALA+K +PS SV N++V MY KCG + +A + F M + +S +ITG
Sbjct: 331 QGKQMQALAVK--LPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITG 388
Query: 430 YAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEP 489
Y +HG+ +S+++F M++ +I P+ + +++VLSAC+H+G ++EG++ F+ + E GI+P
Sbjct: 389 YGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKP 448
Query: 490 EAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKF 549
+H++C+VDLLGRAG+L+EA+ +I+TMP P W LL CR HG++EL +
Sbjct: 449 RVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKIL 508
Query: 550 LQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAE 609
L+++ N YVM+SN+Y AG W E + L +G+KK+ G SW++I+ +VH F +
Sbjct: 509 LRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSG 568
Query: 610 DSSHPMIKEIHEYMGEMLRKMKQA-GYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVA 668
+ SHP+ I E + E R++++ GYV ++ L D+ E KE L HSEKLA+
Sbjct: 569 EDSHPLTPVIQETLKEAERRLREELGYVYGLKHEL---HDIDDESKEENLRAHSEKLAIG 625
Query: 669 FGLIS---TKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSC 725
L + ++G I V KNLR+C DCH IK +S I+ VRDA RFH F++G CSC
Sbjct: 626 LALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSC 685
Query: 726 KDYW 729
DYW
Sbjct: 686 GDYW 689
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 151/293 (51%), Gaps = 11/293 (3%)
Query: 268 GMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGF 327
G Q H ++KSG N + LIDMY KC R L KVF+ + E ++V W+ ++SG
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKC--REPLMAYKVFDSMPERNVVSWSALMSGH 82
Query: 328 SQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSN 387
+ DL + +L F +M R G P++ +FS AC L++ G Q+H +K
Sbjct: 83 VLNGDL-KGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEM- 140
Query: 388 RVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMM 447
V V N+LV MYSKCG +++A +VF + + + +S N+MI G+ G ++L F +M
Sbjct: 141 MVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQ 200
Query: 448 QEDIV--PNNITFISVLSACAHTGKVEEGQKYFN-MMKEKFGIEPEAKHFSCMVDLLGRA 504
+ +I P+ T S+L AC+ TG + G++ +++ F A +VDL +
Sbjct: 201 EANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKC 260
Query: 505 GKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNA 557
G L A + + + + I W++L+ + G V+A F +L+ N+
Sbjct: 261 GYLFSARKAFDQIK-EKTMISWSSLILGYAQEGEF---VEAMGLFKRLQELNS 309
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 250/720 (34%), Positives = 400/720 (55%), Gaps = 53/720 (7%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
FT+ LK +S LH+ +K + ++ YS CG++D+ART
Sbjct: 148 VFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSART----- 202
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+F+ I DIV + +++ + G +++L
Sbjct: 203 --------------------------VFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLS 236
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGL-----VMQLHCFAVLCGYSCYASVCNAVLARYG 192
R AG + +T +KA +GL +H + Y V +L Y
Sbjct: 237 CMRMAGFMPNNYTFDTALKA---SIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYT 293
Query: 193 GRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTM 252
G +S+A++VF+EM + D + W+ MI Q EA+ LF M + + FT+
Sbjct: 294 QLGDMSDAFKVFNEMPK--NDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTL 351
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEI 312
+S+L + G Q HG ++K GF+ + +V + LID+Y+KC M +K+F E+
Sbjct: 352 SSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEK--MDTAVKLFAEL 409
Query: 313 SEPDLVLWNTMISGFSQHEDLSE--DALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPS 370
S + V WNT+I G+ E+L E A F++ R + +FS AC++L+S
Sbjct: 410 SSKNEVSWNTVIVGY---ENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMD 466
Query: 371 LGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGY 430
LG QVH LAIK++ + +V+V+N+L+ MY+KCG++ A+ VF+ M + S N++I+GY
Sbjct: 467 LGVQVHGLAIKTN-NAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGY 525
Query: 431 AQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPE 490
+ HG+ ++L++ ++M D PN +TF+ VLS C++ G +++GQ+ F M GIEP
Sbjct: 526 STHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPC 585
Query: 491 AKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFL 550
+H++CMV LLGR+G+L++A ++IE +P++P + W A+L A N E A ++A + L
Sbjct: 586 LEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEIL 645
Query: 551 QLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAED 610
++ P + YV++SNMYA A +W A++++ M+E GVKK+PG SWI+ VH F
Sbjct: 646 KINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGL 705
Query: 611 SSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFG 670
S HP +K I+ + + K +AGYVPD R A+ D D EEK++RL HSE+LA+A+G
Sbjct: 706 SDHPDMKLINGMLEWLNMKATRAGYVPD-RNAVLLDMD--DEEKDKRLWVHSERLALAYG 762
Query: 671 LISTKEGVP-ILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
L+ IL++KNLRIC DCH+A+K+IS+I R++ +RD +RFH F G CSC D+W
Sbjct: 763 LVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 216/460 (46%), Gaps = 16/460 (3%)
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
++F+ N +++A VK A LFDE+P + VS+ TL +A + G RL +E
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGH 142
Query: 141 EAGLCLDGFTLSGVIK--ACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLS 198
E L+ + +K + + LH V GY A V A++ Y G +
Sbjct: 143 E----LNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVD 198
Query: 199 EAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTA 258
A VF G C+D + W ++ + +++L L M G + +T + L A
Sbjct: 199 SARTVFE--GILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKA 256
Query: 259 FTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLV 318
L HG+++K+ + +P VG GL+ +Y++ M D KVF E+ + D+V
Sbjct: 257 SIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGD--MSDAFKVFNEMPKNDVV 314
Query: 319 LWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHAL 378
W+ MI+ F Q+ +A+ F M+ A P++ + S + + C+ LG+Q+H L
Sbjct: 315 PWSFMIARFCQN-GFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGL 373
Query: 379 AIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGE 438
+K + + V+NAL+ +Y+KC + A ++F + N VS N++I GY G G+
Sbjct: 374 VVKVGFDLD-IYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGK 432
Query: 439 SLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMV 498
+ +F ++ + +TF S L ACA ++ G + + + + A S ++
Sbjct: 433 AFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNS-LI 491
Query: 499 DLLGRAGKLEEAERIIETM-PFDPGSIEWAALLGACRKHG 537
D+ + G ++ A+ + M D S W AL+ HG
Sbjct: 492 DMYAKCGDIKFAQSVFNEMETIDVAS--WNALISGYSTHG 529
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 183/389 (47%), Gaps = 18/389 (4%)
Query: 146 LDGFTLSGVIKAC--REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRV 203
LD +++ C + D +HC + G N +L Y G +A +
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 204 FHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLE 263
F EM E R+ +S+ V Q ++ + L+ + R G +++ S L F L+
Sbjct: 107 FDEMPE--RNNVSF----VTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLD 160
Query: 264 DLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMK-VFEEISEPDLVLWNT 322
H ++K G++ N VG+ LI+ YS C G +D + VFE I D+V+W
Sbjct: 161 KAEICPWLHSPIVKLGYDSNAFVGAALINAYSVC---GSVDSARTVFEGILCKDIVVWAG 217
Query: 323 MISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKS 382
++S + ++ ED+L M+ AGF P++ +F A L + K VH +K+
Sbjct: 218 IVSCYVENGYF-EDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKT 276
Query: 383 -DIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQ 441
+ RV V L+ +Y++ G++ DA +VF+ MP+++ V + MI + Q+G E++
Sbjct: 277 CYVLDPRVGV--GLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVD 334
Query: 442 LFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLL 501
LF M + +VPN T S+L+ CA GK + + + K G + + + ++D+
Sbjct: 335 LFIRMREAFVVPNEFTLSSILNGCA-IGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVY 393
Query: 502 GRAGKLEEAERIIETMPFDPGSIEWAALL 530
+ K++ A ++ + + W ++
Sbjct: 394 AKCEKMDTAVKLFAELS-SKNEVSWNTVI 421
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 414 bits (1063), Expect = e-115, Method: Compositional matrix adjust.
Identities = 241/653 (36%), Positives = 365/653 (55%), Gaps = 14/653 (2%)
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
+ + N++I+ VK AR+LFD +P ++VS+ ++ + + G ++LFK
Sbjct: 68 DAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMF 127
Query: 141 EAGLCL-DGFTLSGVIKACREDVGLV---MQLHCFAVLCGYSCYASVCNAVLARYGGRGL 196
+G + F + V K+C + G + Q H + G + V N ++ Y
Sbjct: 128 FSGESRPNEFVATVVFKSC-SNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSG 186
Query: 197 LSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVL 256
EA RV ++ C D +++ + +C KE L + + + T S L
Sbjct: 187 NGEAIRVLDDLPY-C-DLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSL 244
Query: 257 TAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPD 316
F+ L DL +Q H RM++ GFN LI+MY KC +L +VF++ +
Sbjct: 245 RLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGK--VLYAQRVFDDTHAQN 302
Query: 317 LVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVH 376
+ L T++ + Q + E+AL F M P++ +F+ + ++ + LS G +H
Sbjct: 303 IFLNTTIMDAYFQDKSF-EEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLH 361
Query: 377 ALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVE 436
L +KS N V V NALV MY+K G++ DAR+ F M + V+ N+MI+G + HG+
Sbjct: 362 GLVLKSGY-RNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLG 420
Query: 437 GESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSC 496
E+L+ F+ M+ +PN ITFI VL AC+H G VE+G YFN + +KF ++P+ +H++C
Sbjct: 421 REALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTC 480
Query: 497 MVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHN 556
+V LL +AG ++AE + T P + + W LL AC N L K A ++ P++
Sbjct: 481 IVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPND 540
Query: 557 AVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMI 616
+ YV+LSN++A + WE A V+ LM RGVKK+PG SWI I N+ HVF+AED+ HP I
Sbjct: 541 SGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEI 600
Query: 617 KEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKE 676
I+ + E++ K+K GY PD+ A DV E++E L YHSEKLAVA+GLI T E
Sbjct: 601 TLIYAKVKEVMSKIKPLGYSPDVAGAF---HDVDEEQREDNLSYHSEKLAVAYGLIKTPE 657
Query: 677 GVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
P+ V KN+RIC DCH+AIKLIS IS R I +RD++RFH F +G CSC DYW
Sbjct: 658 KSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 127/313 (40%), Gaps = 39/313 (12%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T+ + L+ + RD++ +H+ ++ +Y KCG + A+ F T
Sbjct: 239 TYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDT 298
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+ N+F I+DA + A LF ++ ++ E+ A+ L
Sbjct: 299 HAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPP-----------NEYTFAI-LLN 346
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLL 197
E L G L G++ + GY + V NA++ Y G +
Sbjct: 347 SIAELSLLKQGDLLHGLV-----------------LKSGYRNHVMVGNALVNMYAKSGSI 389
Query: 198 SEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLT 257
+A + F G RD ++WN MI C G+EAL F M+ G + T VL
Sbjct: 390 EDARKAFS--GMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQ 447
Query: 258 AFTCLEDLAGGMQFHGRMIKSGFNWNPHVG--SGLIDMYSKCAPRGMLDCMKVFEEIS-- 313
A + + + G+ + +++K F+ P + + ++ + SK GM + F +
Sbjct: 448 ACSHIGFVEQGLHYFNQLMKK-FDVQPDIQHYTCIVGLLSKA---GMFKDAEDFMRTAPI 503
Query: 314 EPDLVLWNTMISG 326
E D+V W T+++
Sbjct: 504 EWDVVAWRTLLNA 516
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 411 bits (1056), Expect = e-115, Method: Compositional matrix adjust.
Identities = 233/579 (40%), Positives = 332/579 (57%), Gaps = 53/579 (9%)
Query: 197 LSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKE--ALVLFGEMVRMG-MKIDMFTMA 253
L A ++F++M + R+ SWN +I + E K A+ LF EM+ ++ + FT
Sbjct: 75 LDYAHKIFNQMPQ--RNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFP 132
Query: 254 SVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCA--------------P 299
SVL A + G Q HG +K GF + V S L+ MY C
Sbjct: 133 SVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIE 192
Query: 300 RGML--------------------------DCMK---VFEEISEPDLVLWNTMISGFSQH 330
+ M+ DC +F+++ + +V WNTMISG+S +
Sbjct: 193 KDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLN 252
Query: 331 EDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVS 390
+DA+ F++M++ RP+ + V A S L S LG+ +H A S I + V
Sbjct: 253 -GFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV- 310
Query: 391 VNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQED 450
+ +AL+ MYSKCG + A VF+ +P N ++ ++MI G+A HG G+++ F M Q
Sbjct: 311 LGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAG 370
Query: 451 IVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEA 510
+ P+++ +I++L+AC+H G VEEG++YF+ M G+EP +H+ CMVDLLGR+G L+EA
Sbjct: 371 VRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEA 430
Query: 511 ERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASA 570
E I MP P + W ALLGACR GNVE+ + AN + + PH++ YV LSNMYAS
Sbjct: 431 EEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQ 490
Query: 571 GRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKM 630
G W E + ++ M+E+ ++K PGCS I ID +H FV ED SHP KEI+ + E+ K+
Sbjct: 491 GNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKL 550
Query: 631 KQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLRICG 690
+ AGY P L E+ E+KE L YHSEK+A AFGLIST G PI +VKNLRIC
Sbjct: 551 RLAGYRPITTQVLLNLEE---EDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICE 607
Query: 691 DCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
DCH++IKLIS + R+ITVRD RFH F++G CSC DYW
Sbjct: 608 DCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/420 (21%), Positives = 176/420 (41%), Gaps = 60/420 (14%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSF--- 74
TF ++LK C I GK +H L +K ++ ++ +Y CG + +AR F
Sbjct: 130 TFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKN 189
Query: 75 -----------RLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAH 123
R + + +N +ID ++ AR LFD++ + +VS+NT+I+ +
Sbjct: 190 IIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGY 249
Query: 124 AHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYA 181
+ G AV +F+E ++ + + TL V+ A + L LH +A G
Sbjct: 250 SLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDD 309
Query: 182 SVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMV 241
+ +A++ Y G++ +A VF + + I+W+AMI + +A+ F +M
Sbjct: 310 VLGSALIDMYSKCGIIEKAIHVFERLPR--ENVITWSAMINGFAIHGQAGDAIDCFCKMR 367
Query: 242 RMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRG 301
+ G++ ++LTA + HG +++ G + + S
Sbjct: 368 QAGVRPSDVAYINLLTACS-----------HGGLVEEGRRYFSQMVS------------- 403
Query: 302 MLDCMKVFEEISEPDLVLWNTMIS--GFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCV 359
+D + EP + + M+ G S D +E+ ++ +PDD + +
Sbjct: 404 -VDGL-------EPRIEHYGCMVDLLGRSGLLDEAEEFIL------NMPIKPDDVIWKAL 449
Query: 360 TSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHN 419
AC + +GK+V + + D+ + AL MY+ GN + + M E +
Sbjct: 450 LGACRMQGNVEMGKRVANILM--DMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKD 507
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 113/237 (47%), Gaps = 27/237 (11%)
Query: 374 QVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHD-----ARRVFDTMPEHNTVSLNSMIT 428
Q+HA+ IKS R ++ A + + +LH A ++F+ MP+ N S N++I
Sbjct: 41 QIHAVFIKSG--QMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIR 98
Query: 429 GYAQHGVEGESLQL---FELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKF 485
G+++ + + + +E+M E + PN TF SVL ACA TGK++EG K + + K+
Sbjct: 99 GFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEG-KQIHGLALKY 157
Query: 486 GIEPEAKHFSCMVDLLGRAGKLEEA-----ERIIET--------MPFDPGSIEWAALLGA 532
G + S +V + G +++A + IIE D + W ++
Sbjct: 158 GFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDG 217
Query: 533 CRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVK 589
+ G+ + A +K Q + V + + + Y+ G ++++ V R M++ ++
Sbjct: 218 YMRLGDCKAARMLFDKMRQ---RSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIR 271
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 243/669 (36%), Positives = 365/669 (54%), Gaps = 37/669 (5%)
Query: 69 NARTSFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGE 128
+AR F + N+ S+N ++ +K+ + AR++FD +P ++VS+ L+ + H G+
Sbjct: 66 DARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGK 125
Query: 129 HGPAVRLFKEAREAG-----LCLDGFTLSGVI-KACREDVGLVMQLHCFAVLCGYSCYAS 182
A LF + E + L GF G I AC+ L + + S
Sbjct: 126 VDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACK----LYEMIPDKDNIARTSMIHG 181
Query: 183 VCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVR 242
+C G + EA +F EM E R I+W M+ GQ +A +F M
Sbjct: 182 LCK--------EGRVDEAREIFDEMSE--RSVITWTTMVTGYGQNNRVDDARKIFDVMPE 231
Query: 243 MGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGM 302
++ +M +ED F +K N + SGL R +
Sbjct: 232 -KTEVSWTSMLMGYVQNGRIED--AEELFEVMPVKPVIACNAMI-SGLGQKGEIAKARRV 287
Query: 303 LDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSA 362
D MK + S W T+I + +AL F MQ+ G RP + + S
Sbjct: 288 FDSMKERNDAS------WQTVIK-IHERNGFELEALDLFILMQKQGVRPTFPTLISILSV 340
Query: 363 CSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVS 422
C++L+S GKQVHA ++ + V V + L+ MY KCG L ++ +FD P + +
Sbjct: 341 CASLASLHHGKQVHAQLVRCQFDVD-VYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIM 399
Query: 423 LNSMITGYAQHGVEGESLQLF-ELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMM 481
NS+I+GYA HG+ E+L++F E+ + PN +TF++ LSAC++ G VEEG K + M
Sbjct: 400 WNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESM 459
Query: 482 KEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVEL 541
+ FG++P H++CMVD+LGRAG+ EA +I++M +P + W +LLGACR H +++
Sbjct: 460 ESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDV 519
Query: 542 AVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDN 601
A A K +++EP N+ Y++LSNMYAS GRW + A +++LM+ R V+K PGCSW +++N
Sbjct: 520 AEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVEN 579
Query: 602 KVHVFVAED-SSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLY 660
KVH F +SHP + I + + E+ +++AGY PD +AL DV EEK L Y
Sbjct: 580 KVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYAL---HDVDEEEKVNSLKY 636
Query: 661 HSEKLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKE 720
HSE+LAVA+ L+ EG+PI V+KNLR+C DCH AIK+IS + REI +RDA+RFH F+
Sbjct: 637 HSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRN 696
Query: 721 GHCSCKDYW 729
G CSCKDYW
Sbjct: 697 GECSCKDYW 705
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 225/480 (46%), Gaps = 38/480 (7%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLL-YSKCGTLDNARTSFRL 76
++T L+K + + +SL + K +P +S L+ + + G +D+A + +
Sbjct: 112 SWTALVKGYVHNGKVDVAESL---FWK--MPEKNKVSWTVMLIGFLQDGRIDDACKLYEM 166
Query: 77 TNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLF 136
+ + + ++I K + ARE+FDE+ ++++ T++ + A ++F
Sbjct: 167 IPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF 226
Query: 137 K---EAREAGLC--LDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARY 191
E E L G+ +G I+ E F V+ A CNA+++
Sbjct: 227 DVMPEKTEVSWTSMLMGYVQNGRIEDAEE---------LFEVMPVKPVIA--CNAMISGL 275
Query: 192 GGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFT 251
G +G +++A RVF M E R++ SW +I + EAL LF M + G++ T
Sbjct: 276 GQKGEIAKARRVFDSMKE--RNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPT 333
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEE 311
+ S+L+ L L G Q H ++++ F+ + +V S L+ MY KC ++ +F+
Sbjct: 334 LISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGE--LVKSKLIFDR 391
Query: 312 ISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAG-FRPDDCSFSCVTSACSNLSSPS 370
D+++WN++ISG++ H L E+AL F +M +G +P++ +F SACS
Sbjct: 392 FPSKDIIMWNSIISGYASH-GLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVE 450
Query: 371 LGKQVHALAIKSDIPSNRVSVNNA-LVAMYSKCGNLHDARRVFDTMP-EHNTVSLNSMIT 428
G +++ +++S ++ + A +V M + G ++A + D+M E + S++
Sbjct: 451 EGLKIYE-SMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLG 509
Query: 429 GYAQHGVEGESLQLFELMMQE--DIVPNNI-TFISVLSACAHTGKVEEGQKYFNMMKEKF 485
H L + E ++ +I P N T+I + + A G+ + + +MK +
Sbjct: 510 ACRTHS----QLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRL 565
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 109/218 (50%), Gaps = 17/218 (7%)
Query: 371 LGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGY 430
+GK A + S +S N++VA Y DAR++FD MP+ N +S N +++GY
Sbjct: 30 IGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGY 89
Query: 431 AQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPE 490
++G E+ ++F+LM + ++V ++ +++ H GKV+ + F M PE
Sbjct: 90 MKNGEIDEARKVFDLMPERNVV----SWTALVKGYVHNGKVDVAESLFWKM-------PE 138
Query: 491 AKHFSCMVDLLG--RAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANK 548
S V L+G + G++++A ++ E +P D +I +++ K G V+ +A
Sbjct: 139 KNKVSWTVMLIGFLQDGRIDDACKLYEMIP-DKDNIARTSMIHGLCKEGRVD---EAREI 194
Query: 549 FLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRER 586
F ++ + + + + Y R +++ + +M E+
Sbjct: 195 FDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK 232
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 409 bits (1052), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/533 (40%), Positives = 321/533 (60%), Gaps = 8/533 (1%)
Query: 197 LSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVL 256
+S A +F M E D + +N+M + E LF E++ G+ D +T S+L
Sbjct: 79 MSYARHLFEAMSEP--DIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 257 TAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPD 316
A + L G Q H +K G + N +V LI+MY++C C VF+ I EP
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARC--VFDRIVEPC 194
Query: 317 LVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVH 376
+V +N MI+G+++ +E AL F++MQ +P++ + V S+C+ L S LGK +H
Sbjct: 195 VVCYNAMITGYARRNRPNE-ALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIH 253
Query: 377 ALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVE 436
A K V VN AL+ M++KCG+L DA +F+ M +T + ++MI YA HG
Sbjct: 254 KYAKKHSF-CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKA 312
Query: 437 GESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSC 496
+S+ +FE M E++ P+ ITF+ +L+AC+HTG+VEEG+KYF+ M KFGI P KH+
Sbjct: 313 EKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGS 372
Query: 497 MVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHN 556
MVDLL RAG LE+A I+ +P P + W LL AC H N++LA K + + +L+ +
Sbjct: 373 MVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSH 432
Query: 557 AVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMI 616
YV+LSN+YA +WE +++++M++R K PGCS I+++N VH F + D
Sbjct: 433 GGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSAT 492
Query: 617 KEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKE 676
++H + EM++++K +GYVPD + ++ +EKE L YHSEKLA+ FGL++T
Sbjct: 493 TKLHRALDEMVKELKLSGYVPDTSMVV--HANMNDQEKEITLRYHSEKLAITFGLLNTPP 550
Query: 677 GVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
G I VVKNLR+C DCHNA KLIS I GR++ +RD RFH F++G CSC D+W
Sbjct: 551 GTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 180/386 (46%), Gaps = 20/386 (5%)
Query: 44 KTFIPHS---TYLSNHFTLLYSKCGTLDNART--SFRLTNNPNVFSYNA-IIDACVK--- 94
+TF HS T + + LL SKC +L ++ + ++ S+ A +I+ C +
Sbjct: 16 ETFTKHSKIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPT 75
Query: 95 HSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGV 154
S + AR LF+ + PDIV +N++ ++ LF E E G+ D +T +
Sbjct: 76 ESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSL 135
Query: 155 IKACREDVGLV--MQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCR 212
+KAC L QLHC ++ G VC ++ Y + A VF + E C
Sbjct: 136 LKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCV 195
Query: 213 DEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFH 272
+ +NAMI + EAL LF EM +K + T+ SVL++ L L G H
Sbjct: 196 --VCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIH 253
Query: 273 GRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHED 332
K F V + LIDM++KC + D + +FE++ D W+ MI ++ H
Sbjct: 254 KYAKKHSFCKYVKVNTALIDMFAKCG--SLDDAVSIFEKMRYKDTQAWSAMIVAYANHGK 311
Query: 333 LSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKS--DIPSNRVS 390
+E +++ F+ M+ +PD+ +F + +ACS+ G++ + + +PS +
Sbjct: 312 -AEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPS--IK 368
Query: 391 VNNALVAMYSKCGNLHDARRVFDTMP 416
++V + S+ GNL DA D +P
Sbjct: 369 HYGSMVDLLSRAGNLEDAYEFIDKLP 394
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 144/322 (44%), Gaps = 43/322 (13%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF +LLK C + + G+ LH L +K + + Y+ +Y++C +D+AR
Sbjct: 131 TFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSAR------ 184
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
CV FD I P +V YN +I +A R A+ LF+
Sbjct: 185 --------------CV-----------FDRIVEPCVVCYNAMITGYARRNRPNEALSLFR 219
Query: 138 EAREAGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
E + L + TL V+ +C + L +H +A + Y V A++ + G
Sbjct: 220 EMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCG 279
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
L +A +F +M +D +W+AMIVA + ++++++F M ++ D T +
Sbjct: 280 SLDDAVSIFEKMRY--KDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGL 337
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNP---HVGSGLIDMYSKCAPRGMLDCMKVFEEI 312
L A + + G ++ +M+ S F P H GS ++D+ S+ + D + +++
Sbjct: 338 LNACSHTGRVEEGRKYFSQMV-SKFGIVPSIKHYGS-MVDLLSRAG--NLEDAYEFIDKL 393
Query: 313 S-EPDLVLWNTMISGFSQHEDL 333
P +LW +++ S H +L
Sbjct: 394 PISPTPMLWRILLAACSSHNNL 415
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 407 bits (1045), Expect = e-113, Method: Compositional matrix adjust.
Identities = 241/655 (36%), Positives = 362/655 (55%), Gaps = 65/655 (9%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTN 78
+ ++L+ C + ++ G LHA +K+ + +Y+KC + +A+
Sbjct: 284 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQI------ 337
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHG-PAVRLFK 137
LFD + SYN +I ++ EHG A+ LF
Sbjct: 338 -------------------------LFDNSENLNRQSYNAMITGYSQE-EHGFKALLLFH 371
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLV--MQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
+GL D +LSGV +AC GL +Q++ A+ S V NA + YG
Sbjct: 372 RLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQ 431
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
L+EA+RVF EM RD +SWNA+I A Q +G E L LF M+R ++ D FT S+
Sbjct: 432 ALAEAFRVFDEMRR--RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSI 489
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD----------- 304
L A T L GM+ H ++KSG N VG LIDMYSKC GM++
Sbjct: 490 LKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKC---GMIEEAEKIHSRFFQ 545
Query: 305 ------CMKVFEEISEPDL----VLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDC 354
M+ E++ L V WN++ISG+ E SEDA + F M G PD
Sbjct: 546 RANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQ-SEDAQMLFTRMMEMGITPDKF 604
Query: 355 SFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDT 414
+++ V C+NL+S LGKQ+HA IK ++ S+ V + + LV MYSKCG+LHD+R +F+
Sbjct: 605 TYATVLDTCANLASAGLGKQIHAQVIKKELQSD-VYICSTLVDMYSKCGDLHDSRLMFEK 663
Query: 415 MPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEG 474
+ V+ N+MI GYA HG E++QLFE M+ E+I PN++TFIS+L ACAH G +++G
Sbjct: 664 SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKG 723
Query: 475 QKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACR 534
+YF MMK +G++P+ H+S MVD+LG++GK++ A +I MPF+ + W LLG C
Sbjct: 724 LEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCT 783
Query: 535 KH-GNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPG 593
H NVE+A +A L+L+P ++ Y +LSN+YA AG WE+ + ++R MR +KK+PG
Sbjct: 784 IHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPG 843
Query: 594 CSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDED 648
CSW+++ +++HVF+ D +HP +EI+E +G + +MK +R ++ED
Sbjct: 844 CSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPFDDSSFVRGVEVEEED 898
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 153/498 (30%), Positives = 247/498 (49%), Gaps = 10/498 (2%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
F+ + K+C Q + GK HA I + +T++ N +Y+ +A F
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+V S+N +I+ K + + A F+ +P D+VS+N++++ + GE ++ +F
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 138 EAREAGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
+ G+ DG T + ++K C ED L MQ+H V G +A+L Y
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
E+ RVF + E ++ +SW+A+I C Q AL F EM ++ + ASV
Sbjct: 230 RFVESLRVFQGIPE--KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASV 287
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEP 315
L + L +L G Q H +KS F + V + +DMY+KC M D +F+
Sbjct: 288 LRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKC--DNMQDAQILFDNSENL 345
Query: 316 DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQV 375
+ +N MI+G+SQ E AL+ F + +G D+ S S V AC+ + S G Q+
Sbjct: 346 NRQSYNAMITGYSQEEH-GFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQI 404
Query: 376 HALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGV 435
+ LAIKS + + V V NA + MY KC L +A RVFD M + VS N++I + Q+G
Sbjct: 405 YGLAIKSSLSLD-VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGK 463
Query: 436 EGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFS 495
E+L LF M++ I P+ TF S+L AC G + G + + + K G+ +
Sbjct: 464 GYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIV-KSGMASNSSVGC 521
Query: 496 CMVDLLGRAGKLEEAERI 513
++D+ + G +EEAE+I
Sbjct: 522 SLIDMYSKCGMIEEAEKI 539
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 182/418 (43%), Gaps = 53/418 (12%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
+ + + + C + +S G ++ L IK+ + ++N +Y KC L A FR
Sbjct: 384 SLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEA---FR-- 438
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+FDE+ R D VS+N +IAAH G+ + LF
Sbjct: 439 --------------------------VFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFV 472
Query: 138 EAREAGLCLDGFTLSGVIKACR-EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGL 196
+ + D FT ++KAC +G M++H V G + +SV +++ Y G+
Sbjct: 473 SMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGM 532
Query: 197 LSEAWRVFHEMGE-----GCRDE-------------ISWNAMIVACGQCREGKEALVLFG 238
+ EA ++ + G +E +SWN++I + ++A +LF
Sbjct: 533 IEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFT 592
Query: 239 EMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCA 298
M+ MG+ D FT A+VL L G Q H ++IK + ++ S L+DMYSKC
Sbjct: 593 RMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCG 652
Query: 299 PRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSC 358
+ D +FE+ D V WN MI G++ H E+A+ F+ M +P+ +F
Sbjct: 653 D--LHDSRLMFEKSLRRDFVTWNAMICGYAHHGK-GEEAIQLFERMILENIKPNHVTFIS 709
Query: 359 VTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP 416
+ AC+++ G + + + ++ + +V + K G + A + MP
Sbjct: 710 ILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMP 767
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 355 SFSCVTSACSNLSSPSLGKQVHALAIKS------------------------------DI 384
+FS V C+ + LGKQ HA I S +
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 385 PSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFE 444
P V N ++ YSK ++ A F+ MP + VS NSM++GY Q+G +S+++F
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 445 LMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRA 504
M +E I + TF +L C+ G + ++ + G + + S ++D+ +
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVV-RVGCDTDVVAASALLDMYAKG 228
Query: 505 GKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNA 557
+ E+ R+ + +P + S+ W+A++ C ++ + LA+K F +++ NA
Sbjct: 229 KRFVESLRVFQGIP-EKNSVSWSAIIAGCVQNNLLSLALKF---FKEMQKVNA 277
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 407 bits (1045), Expect = e-113, Method: Compositional matrix adjust.
Identities = 234/666 (35%), Positives = 365/666 (54%), Gaps = 57/666 (8%)
Query: 78 NNPNV-------FSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHG 130
NNP++ S N +I + K L A + + P +Y LI HR
Sbjct: 35 NNPSISSGAGAKISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLS 94
Query: 131 PAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLAR 190
A+R+ + + G D F + ++
Sbjct: 95 DALRVHRHILDNGSDQDPF---------------------------------LATKLIGM 121
Query: 191 YGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMF 250
Y G + A +VF + + R WNA+ A G+E L L+ +M R+G++ D F
Sbjct: 122 YSDLGSVDYARKVFDKTRK--RTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRF 179
Query: 251 TMASVLTAFTCLE----DLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCM 306
T VL A E L G + H + + G++ + ++ + L+DMY++ G +D
Sbjct: 180 TYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARF---GCVDYA 236
Query: 307 K-VFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQR--AGFRPDDCSFSCVTSAC 363
VF + ++V W+ MI+ ++++ E AL F++M R P+ + V AC
Sbjct: 237 SYVFGGMPVRNVVSWSAMIACYAKNGKAFE-ALRTFREMMRETKDSSPNSVTMVSVLQAC 295
Query: 364 SNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSL 423
++L++ GK +H ++ + S + V +ALV MY +CG L +RVFD M + + VS
Sbjct: 296 ASLAALEQGKLIHGYILRRGLDSI-LPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSW 354
Query: 424 NSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKE 483
NS+I+ Y HG +++Q+FE M+ P +TF+SVL AC+H G VEEG++ F M
Sbjct: 355 NSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWR 414
Query: 484 KFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAV 543
GI+P+ +H++CMVDLLGRA +L+EA ++++ M +PG W +LLG+CR HGNVELA
Sbjct: 415 DHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAE 474
Query: 544 KAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKV 603
+A+ + LEP NA YV+L+++YA A W+E VK+L+ RG++K PG W+++ K+
Sbjct: 475 RASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKM 534
Query: 604 HVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSE 663
+ FV+ D +P++++IH ++ ++ MK+ GY+P + L ++ EEKER +L HSE
Sbjct: 535 YSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVL---YELETEEKERIVLGHSE 591
Query: 664 KLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHC 723
KLA+AFGLI+T +G PI + KNLR+C DCH K IS +EI VRD +RFH FK G C
Sbjct: 592 KLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVC 651
Query: 724 SCKDYW 729
SC DYW
Sbjct: 652 SCGDYW 657
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 405 bits (1041), Expect = e-113, Method: Compositional matrix adjust.
Identities = 252/728 (34%), Positives = 390/728 (53%), Gaps = 61/728 (8%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTN 78
+ L + C QR++ G +LH H L + C +
Sbjct: 62 YAALFQACAEQRNLLDGINLH----------------HHMLSHPYCYS------------ 93
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
NV N +I+ K ++ AR++FD +P ++VS+ LI + G LF
Sbjct: 94 -QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSS 152
Query: 139 AREAGLCL-DGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYG---GR 194
C + FTLS V+ +CR + G Q+H A+ G C V NAV++ YG
Sbjct: 153 MLSH--CFPNEFTLSSVLTSCRYEPG--KQVHGLALKLGLHCSIYVANAVISMYGRCHDG 208
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
EAW VF + ++ ++WN+MI A C GK+A+ +F M G+ D T+ +
Sbjct: 209 AAAYEAWTVFEAIK--FKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLN 266
Query: 255 VLTAFTCLEDLAGG------MQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKV 308
+ ++ DL +Q H +KSG V + LI +YS+ DC K+
Sbjct: 267 ICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEML-EDYTDCYKL 325
Query: 309 FEEISE-PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLS 367
F E+S D+V WN +I+ F+ ++ E A+ F +++ PD +FS V AC+ L
Sbjct: 326 FMEMSHCRDIVAWNGIITAFAVYD--PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLV 383
Query: 368 SPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMI 427
+ +HA IK ++ V +NN+L+ Y+KCG+L RVFD M + VS NSM+
Sbjct: 384 TARHALSIHAQVIKGGFLADTV-LNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSML 442
Query: 428 TGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGI 487
Y+ HG L +F+ M DI P++ TFI++LSAC+H G+VEEG + F M EK
Sbjct: 443 KAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPET 499
Query: 488 EPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAAN 547
P+ H++C++D+L RA + EAE +I+ MP DP ++ W ALLG+CRKHGN L AA+
Sbjct: 500 LPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAAD 559
Query: 548 KFLQL-EPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVF 606
K +L EP N++ Y+ +SN+Y + G + E+ + M V+K+P SW +I NKVH F
Sbjct: 560 KLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEF 619
Query: 607 VAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLA 666
+ P + ++ + ++ +K+ GYVP++R A + E++E LL+HSEKLA
Sbjct: 620 ASGGRHRPDKEAVYRELKRLISWLKEMGYVPEMRSA--SQDIEDEEQEEDNLLHHSEKLA 677
Query: 667 VAFGLISTKE----GVPIL-VVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEG 721
+AF ++ ++ GV ++ ++KN RIC DCHN +KL S + G+EI +RD++RFH FK+
Sbjct: 678 LAFAVMEGRKSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDS 737
Query: 722 HCSCKDYW 729
CSC DYW
Sbjct: 738 SCSCNDYW 745
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF+++LK C S+HA IK T L+N Y+KCG+LD F
Sbjct: 371 TFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDM 430
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIP-RPDIVSYNTLIAAHAHRGEHGPAVRLF 136
++ +V S+N+++ A H + +F ++ PD ++ L++A +H G +R+F
Sbjct: 431 DSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSATFIALLSACSHAGRVEEGLRIF 490
Query: 137 KEARE 141
+ E
Sbjct: 491 RSMFE 495
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 234/656 (35%), Positives = 358/656 (54%), Gaps = 23/656 (3%)
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
NP+V N ++ + L A +LFDE+ + VS T+I+A+A +G AV LF
Sbjct: 115 NPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSG 174
Query: 139 AREAGLCLDGFTLSGVIKACREDVGLVM--QLHCFAVLCGYSCYASVCNAVLARYGGRGL 196
+G + ++K+ L Q+H + G S+ ++ Y G
Sbjct: 175 MLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGW 234
Query: 197 LSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVL 256
L A RVF +M + ++ ++V Q ++AL LF ++V G++ D F + VL
Sbjct: 235 LVGAKRVFDQMA--VKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVL 292
Query: 257 TAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPD 316
A LE+L G Q H + K G VG+ L+D Y KC+ + F+EI EP+
Sbjct: 293 KACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCS--SFESACRAFQEIREPN 350
Query: 317 LVLWNTMISGFSQHEDLSEDALICFQDMQ-RAGFRPDDCSFSCVTSACSNLSSPSLGKQV 375
V W+ +ISG+ Q E+A+ F+ ++ + + +++ + ACS L+ ++G QV
Sbjct: 351 DVSWSAIISGYCQMSQF-EEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQV 409
Query: 376 HALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGV 435
HA AIK + ++ +AL+ MYSKCG L DA VF++M + V+ + I+G+A +G
Sbjct: 410 HADAIKRSLIGSQYG-ESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGN 468
Query: 436 EGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFS 495
E+L+LFE M+ + PN++TFI+VL+AC+H G VE+G+ + M K+ + P H+
Sbjct: 469 ASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYD 528
Query: 496 CMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPH 555
CM+D+ R+G L+EA + ++ MPF+P ++ W L C H N+EL A + QL+P
Sbjct: 529 CMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPE 588
Query: 556 NAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPM 615
+ YV+ N+Y AG+WEE+A + +LM ER +KK+ CSWIQ K+H F+ D HP
Sbjct: 589 DTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQ 648
Query: 616 IKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLIST- 674
+EI+E + E M+ G E+ +LL HSE+LA+AFGLIS
Sbjct: 649 TQEIYEKLKEFDGFME------------GDMFQCNMTERREQLLDHSERLAIAFGLISVH 696
Query: 675 -KEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
PI V KNLR C DCH K +S ++G EI +RD+ RFH FKEG CSC DYW
Sbjct: 697 GNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 121/463 (26%), Positives = 218/463 (47%), Gaps = 17/463 (3%)
Query: 119 LIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLV--MQLHCFAVLCG 176
L++ HR + A +E +AG+ + ++ + +ACRE L LH +
Sbjct: 55 LVSLSKHR-KLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGI 113
Query: 177 YSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVL 236
+ + N VL Y L +A ++F EM E + +S MI A + +A+ L
Sbjct: 114 ENPSVLLQNCVLQMYCECRSLEDADKLFDEMSE--LNAVSRTTMISAYAEQGILDKAVGL 171
Query: 237 FGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSK 296
F M+ G K ++L + L G Q H +I++G N + +G+++MY K
Sbjct: 172 FSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVK 231
Query: 297 CAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSF 356
C ++ +VF++++ V ++ G++Q + DAL F D+ G D F
Sbjct: 232 CG--WLVGAKRVFDQMAVKKPVACTGLMVGYTQ-AGRARDALKLFVDLVTEGVEWDSFVF 288
Query: 357 SCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP 416
S V AC++L +LGKQ+HA K + S VSV LV Y KC + A R F +
Sbjct: 289 SVVLKACASLEELNLGKQIHACVAKLGLES-EVSVGTPLVDFYIKCSSFESACRAFQEIR 347
Query: 417 EHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDI-VPNNITFISVLSACAHTGKVE-EG 474
E N VS +++I+GY Q E+++ F+ + ++ + N+ T+ S+ AC+ G
Sbjct: 348 EPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGG 407
Query: 475 QKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACR 534
Q + + +K + S ++ + + G L++A + E+M +P + W A +
Sbjct: 408 QVHADAIKRSLIGSQYGE--SALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHA 464
Query: 535 KHGNVELAVKAANKFLQ--LEPHNAVPYVMLSNMYASAGRWEE 575
+GN A++ K + ++P N+V ++ + + AG E+
Sbjct: 465 YYGNASEALRLFEKMVSCGMKP-NSVTFIAVLTACSHAGLVEQ 506
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 140/326 (42%), Gaps = 50/326 (15%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
F+ +LK C S +++ GK +HA K + + Y KC + ++A +F+
Sbjct: 287 VFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEI 346
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
PN S++AII + S F+E AV+ FK
Sbjct: 347 REPNDVSWSAIISGYCQMSQ-------FEE------------------------AVKTFK 375
Query: 138 EAREAGLC-LDGFTLSGVIKACR--EDVGLVMQLHCFAV---LCGYSCYASVCNAVLARY 191
R L+ FT + + +AC D + Q+H A+ L G S Y +A++ Y
Sbjct: 376 SLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG-SQYGE--SALITMY 432
Query: 192 GGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFT 251
G L +A VF M D ++W A I EAL LF +MV GMK + T
Sbjct: 433 SKCGCLDDANEVFESMDNP--DIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVT 490
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVG--SGLIDMYSKCAPRGMLD-CMKV 308
+VLTA + + G M++ +N P + +ID+Y++ G+LD +K
Sbjct: 491 FIAVLTACSHAGLVEQGKHCLDTMLRK-YNVAPTIDHYDCMIDIYAR---SGLLDEALKF 546
Query: 309 FEEIS-EPDLVLWNTMISGFSQHEDL 333
+ + EPD + W +SG H++L
Sbjct: 547 MKNMPFEPDAMSWKCFLSGCWTHKNL 572
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 101/197 (51%), Gaps = 3/197 (1%)
Query: 321 NTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAI 380
N + S+H L+E A Q+M +AG S+ C+ AC L S S G+ +H +
Sbjct: 52 NLHLVSLSKHRKLNE-AFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD-RM 109
Query: 381 KSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESL 440
+ I + V + N ++ MY +C +L DA ++FD M E N VS +MI+ YA+ G+ +++
Sbjct: 110 RMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAV 169
Query: 441 QLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDL 500
LF M+ P + + ++L + + ++ G++ + + G+ + +V++
Sbjct: 170 GLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVI-RAGLCSNTSIETGIVNM 228
Query: 501 LGRAGKLEEAERIIETM 517
+ G L A+R+ + M
Sbjct: 229 YVKCGWLVGAKRVFDQM 245
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 254/716 (35%), Positives = 385/716 (53%), Gaps = 50/716 (6%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTN 78
F+ LL+QCI +R IS K++ A +K+ P
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSGFPAE---------------------------- 99
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
S + ++DA +K + AR++FD + IV++N+LIA AV +++
Sbjct: 100 ----ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRL 155
Query: 139 AREAGLCLDGFTLSGVIKACREDVGL---VMQLHCFAVLCGYSCY-ASVCNAVLARYGGR 194
+ D +TLS V KA D+ L + H AV+ G V +A++ Y
Sbjct: 156 MITNNVLPDEYTLSSVFKAF-SDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKF 214
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
G EA V + E +D + A+IV Q E EA+ F M+ ++ + +T AS
Sbjct: 215 GKTREAKLVLDRVEE--KDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYAS 272
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISE 314
VL + L+D+ G HG M+KSGF + L+ MY +C+ + D ++VF+ I
Sbjct: 273 VLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSL--VDDSLRVFKCIEY 330
Query: 315 PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQ 374
P+ V W ++ISG Q+ E ALI F+ M R +P+ + S CSNL+ G+Q
Sbjct: 331 PNQVSWTSLISGLVQN-GREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQ 389
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHG 434
+H + K ++ + + L+ +Y KCG AR VFDT+ E + +SLN+MI YAQ+G
Sbjct: 390 IHGIVTKYGFDRDKYA-GSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNG 448
Query: 435 VEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHF 494
E+L LFE M+ + PN++T +SVL AC ++ VEEG + F+ + K I H+
Sbjct: 449 FGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFR-KDKIMLTNDHY 507
Query: 495 SCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEP 554
+CMVDLLGRAG+LEEAE ++ T +P + W LL AC+ H VE+A + K L++EP
Sbjct: 508 ACMVDLLGRAGRLEEAE-MLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEP 566
Query: 555 HNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDS-SH 613
+ +++SN+YAS G+W +K M++ +KK P SW++I+ + H F+A D SH
Sbjct: 567 GDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSH 626
Query: 614 PMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLIS 673
P ++I E + E+++K K GYV D E+ A KER L HSEKLA+AF +
Sbjct: 627 PNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETA---KERSLHQHSEKLAIAFA-VW 682
Query: 674 TKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
G I ++KNLR+C DCH+ IK++S + REI RD+ RFH F++G CSC DYW
Sbjct: 683 RNVGGSIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 131/314 (41%), Gaps = 35/314 (11%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T+ ++L C + +DI GK +H L +K+ + +Y +C +D++ F+
Sbjct: 269 TYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCI 328
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
PN S+ ++I V++ +A F ++ R D + N+ + A RG A +F+
Sbjct: 329 EYPNQVSWTSLISGLVQNGREEMALIEFRKMMR-DSIKPNSFTLSSALRGCSNLA--MFE 385
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLL 197
E R Q+H G+ + ++ YG G
Sbjct: 386 EGR--------------------------QIHGIVTKYGFDRDKYAGSGLIDLYGKCGCS 419
Query: 198 SEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLT 257
A VF + E D IS N MI + Q G+EAL LF M+ +G++ + T+ SVL
Sbjct: 420 DMARLVFDTLSE--VDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLL 477
Query: 258 AFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVF-EEISEPD 316
A + G + K + ++D+ + G L+ ++ E+ PD
Sbjct: 478 ACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRA---GRLEEAEMLTTEVINPD 534
Query: 317 LVLWNTMISGFSQH 330
LVLW T++S H
Sbjct: 535 LVLWRTLLSACKVH 548
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/469 (43%), Positives = 299/469 (63%), Gaps = 8/469 (1%)
Query: 262 LEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWN 321
+ D+ G H +I+SGF +V + L+ +Y+ C + KVF+++ E DLV WN
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGD--VASAYKVFDKMPEKDLVAWN 58
Query: 322 TMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIK 381
++I+GF+++ E+AL + +M G +PD + + SAC+ + + +LGK+VH IK
Sbjct: 59 SVINGFAENGK-PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 117
Query: 382 SDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQ 441
+ N S +N L+ +Y++CG + +A+ +FD M + N+VS S+I G A +G E+++
Sbjct: 118 VGLTRNLHS-SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIE 176
Query: 442 LFELM-MQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDL 500
LF+ M E ++P ITF+ +L AC+H G V+EG +YF M+E++ IEP +HF CMVDL
Sbjct: 177 LFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDL 236
Query: 501 LGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPY 560
L RAG++++A I++MP P + W LLGAC HG+ +LA A + LQLEP+++ Y
Sbjct: 237 LARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDY 296
Query: 561 VMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIH 620
V+LSNMYAS RW + +++ M GVKK PG S +++ N+VH F+ D SHP I+
Sbjct: 297 VLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIY 356
Query: 621 EYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPI 680
+ EM +++ GYVP I DV EEKE ++YHSEK+A+AF LIST E PI
Sbjct: 357 AKLKEMTGRLRSEGYVPQISNVY---VDVEEEEKENAVVYHSEKIAIAFMLISTPERSPI 413
Query: 681 LVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
VVKNLR+C DCH AIKL+S + REI VRD RFH FK G CSC+DYW
Sbjct: 414 TVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 141/291 (48%), Gaps = 11/291 (3%)
Query: 161 DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAM 220
DV L +H + G+ V N++L Y G ++ A++VF +M E +D ++WN++
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE--KDLVAWNSV 60
Query: 221 IVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGF 280
I + + +EAL L+ EM G+K D FT+ S+L+A + L G + H MIK G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 281 NWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALIC 340
N H + L+D+Y++C + + +F+E+ + + V W ++I G + + ++A+
Sbjct: 121 TRNLHSSNVLLDLYARCGR--VEEAKTLFDEMVDKNSVSWTSLIVGLAVN-GFGKEAIEL 177
Query: 341 FQDMQRA-GFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMY 399
F+ M+ G P + +F + ACS+ G + + R+ +V +
Sbjct: 178 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 237
Query: 400 SKCGNLHDARRVFDTMP-EHNTVSLNSMITGYAQHG----VEGESLQLFEL 445
++ G + A +MP + N V +++ HG E +Q+ +L
Sbjct: 238 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQL 288
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 144/321 (44%), Gaps = 52/321 (16%)
Query: 31 DISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAIID 90
D+ G+++H++ I++ Y+ N LY+ CG + +A
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAY------------------- 43
Query: 91 ACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFT 150
++FD++P D+V++N++I A G+ A+ L+ E G+ DGFT
Sbjct: 44 ------------KVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFT 91
Query: 151 LSGVIKACREDVGLVM--QLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMG 208
+ ++ AC + L + ++H + + G + N +L Y G + EA +F EM
Sbjct: 92 IVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV 151
Query: 209 EGCRDEISWNAMIVACGQCREGKEALVLFGEMVRM-GMKIDMFTMASVLTAFTCLEDLAG 267
+ ++ +SW ++IV GKEA+ LF M G+ T +L A + +
Sbjct: 152 D--KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKE 209
Query: 268 GMQFHGRMIKSGFNWNP---HVGSGLIDMYSKCAPRGMLDCMKVFEEIS----EPDLVLW 320
G ++ RM + + P H G ++D+ ++ K +E I +P++V+W
Sbjct: 210 GFEYFRRM-REEYKIEPRIEHFGC-MVDLLARAG-----QVKKAYEYIKSMPMQPNVVIW 262
Query: 321 NTMISGFSQH--EDLSEDALI 339
T++ + H DL+E A I
Sbjct: 263 RTLLGACTVHGDSDLAEFARI 283
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 403 bits (1035), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/634 (35%), Positives = 352/634 (55%), Gaps = 16/634 (2%)
Query: 101 ARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACRE 160
A +F ++P D++S+N+L+A+ + G A+ L +G ++ T + + AC
Sbjct: 315 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 374
Query: 161 ----DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEIS 216
+ G + LH V+ G + NA+++ YG G +SE+ RV +M RD ++
Sbjct: 375 PDFFEKGRI--LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPR--RDVVA 430
Query: 217 WNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDL-AGGMQFHGRM 275
WNA+I + + +AL F M G+ + T+ SVL+A DL G H +
Sbjct: 431 WNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYI 490
Query: 276 IKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSE 335
+ +GF + HV + LI MY+KC + +F + +++ WN M++ + H E
Sbjct: 491 VSAGFESDEHVKNSLITMYAKCGD--LSSSQDLFNGLDNRNIITWNAMLAA-NAHHGHGE 547
Query: 336 DALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNAL 395
+ L M+ G D SFS SA + L+ G+Q+H LA+K + + NA
Sbjct: 548 EVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSF-IFNAA 606
Query: 396 VAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNN 455
MYSKCG + + ++ + S N +I+ +HG E F M++ I P +
Sbjct: 607 ADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGH 666
Query: 456 ITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIE 515
+TF+S+L+AC+H G V++G Y++M+ FG+EP +H C++DLLGR+G+L EAE I
Sbjct: 667 VTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFIS 726
Query: 516 TMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEE 575
MP P + W +LL +C+ HGN++ KAA +LEP + YV+ SNM+A+ GRWE+
Sbjct: 727 KMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWED 786
Query: 576 SATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGY 635
V++ M + +KKK CSW+++ +KV F D +HP EI+ + ++ + +K++GY
Sbjct: 787 VENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGY 846
Query: 636 VPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLRICGDCHNA 695
V D AL +D E+KE L HSE+LA+A+ L+ST EG + + KNLRIC DCH+
Sbjct: 847 VADTSQAL---QDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSV 903
Query: 696 IKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
K +S + GR I +RD +RFH F+ G CSCKDYW
Sbjct: 904 YKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/470 (26%), Positives = 238/470 (50%), Gaps = 9/470 (1%)
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
+V+ AI+ + + +R++F+E+P ++VS+ +L+ ++ +GE + ++K R
Sbjct: 93 DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMR 152
Query: 141 EAGLCLDGFTLSGVIKAC--REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLS 198
G+ + ++S VI +C +D L Q+ V G +V N++++ G G +
Sbjct: 153 GEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVD 212
Query: 199 EAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTA 258
A +F +M E RD ISWN++ A Q +E+ +F M R +++ T++++L+
Sbjct: 213 YANYIFDQMSE--RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSV 270
Query: 259 FTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLV 318
++ G HG ++K GF+ V + L+ MY+ ++ VF+++ DL+
Sbjct: 271 LGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRS--VEANLVFKQMPTKDLI 328
Query: 319 LWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHAL 378
WN++++ F ++ S DAL M +G + +F+ +AC G+ +H L
Sbjct: 329 SWNSLMASFV-NDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGL 387
Query: 379 AIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGE 438
+ S + N++ + NALV+MY K G + ++RRV MP + V+ N++I GYA+ +
Sbjct: 388 VVVSGLFYNQI-IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDK 446
Query: 439 SLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMV 498
+L F+ M E + N IT +SVLSAC G + E K + G E + + ++
Sbjct: 447 ALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLI 506
Query: 499 DLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANK 548
+ + G L ++ + + + I W A+L A HG+ E +K +K
Sbjct: 507 TMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGEEVLKLVSK 555
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 117/457 (25%), Positives = 221/457 (48%), Gaps = 13/457 (2%)
Query: 93 VKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLS 152
K + AR LFD +P + VS+NT+++ G + + F++ + G+ F ++
Sbjct: 3 TKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIA 62
Query: 153 GVIKACREDVGLV---MQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGE 209
++ AC + +Q+H F G V A+L YG GL+S + +VF EM +
Sbjct: 63 SLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPD 122
Query: 210 GCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGM 269
R+ +SW +++V E +E + ++ M G+ + +M+ V+++ L+D + G
Sbjct: 123 --RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 270 QFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMK-VFEEISEPDLVLWNTMISGFS 328
Q G+++KSG V + LI M G +D +F+++SE D + WN++ + ++
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISM---LGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 329 QHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNR 388
Q+ + E++ F M+R + + S + S ++ G+ +H L +K S
Sbjct: 238 QNGHI-EESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS-V 295
Query: 389 VSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQ 448
V V N L+ MY+ G +A VF MP + +S NS++ + G ++L L M+
Sbjct: 296 VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS 355
Query: 449 EDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLE 508
N +TF S L+AC E+G+ ++ G+ + +V + G+ G++
Sbjct: 356 SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVS-GLFYNQIIGNALVSMYGKIGEMS 414
Query: 509 EAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKA 545
E+ R++ MP + W AL+G + + + A+ A
Sbjct: 415 ESRRVLLQMP-RRDVVAWNALIGGYAEDEDPDKALAA 450
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/506 (22%), Positives = 205/506 (40%), Gaps = 77/506 (15%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TFT+ L C + G+ LH L + + + ++ + N +Y K G + +R
Sbjct: 364 TFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR------ 417
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+ ++PR D+V++N LI +A + A+ F+
Sbjct: 418 -------------------------RVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQ 452
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQ---LHCFAVLCGYSCYASVCNAVLARYGGR 194
R G+ + T+ V+ AC L+ + LH + V G+ V N+++ Y
Sbjct: 453 TMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKC 512
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
G LS + +F+ G R+ I+WNAM+ A G+E L L +M G+ +D F+ +
Sbjct: 513 GDLSSSQDLFN--GLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSE 570
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISE 314
L+A L L G Q HG +K GF + + + DMYSKC G + +K+
Sbjct: 571 GLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG--EVVKMLPPSVN 628
Query: 315 PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQ 374
L WN +IS +H E+ F +M G +P +F + +ACS+ G
Sbjct: 629 RSLPSWNILISALGRHGYF-EEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLA 687
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHG 434
+ + + + ++ + + G L +A MP
Sbjct: 688 YYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMP------------------ 729
Query: 435 VEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHF 494
+ PN++ + S+L++C G ++ G+K + + +EPE
Sbjct: 730 ----------------MKPNDLVWRSLLASCKIHGNLDRGRKAAENLSK---LEPEDDSV 770
Query: 495 SCM-VDLLGRAGKLEEAERIIETMPF 519
+ ++ G+ E+ E + + M F
Sbjct: 771 YVLSSNMFATTGRWEDVENVRKQMGF 796
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Query: 398 MYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNIT 457
MY+K G + AR +FD MP N VS N+M++G + G+ E ++ F M I P++
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 458 FISVLSACAHTGKV-EEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIET 516
S+++AC +G + EG + + K G+ + + ++ L G G + + ++ E
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVA-KSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 517 MPFDPGSIEWAALLGACRKHGNVE 540
MP D + W +L+ G E
Sbjct: 120 MP-DRNVVSWTSLMVGYSDKGEPE 142
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 248/673 (36%), Positives = 353/673 (52%), Gaps = 57/673 (8%)
Query: 101 ARELFDEIPRP-DIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACR 159
A +F IP P + + +N + + E + ++ R G LD F+ ++KA
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 160 EDVGLV--MQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISW 217
+ L M+LH A C V + Y G ++ A VF EM RD ++W
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSH--RDVVTW 180
Query: 218 NAMIVACGQCREG--KEALVLFGEMVRMGMKIDMFTMASV-------------------- 255
N MI CR G EA LF EM + D + ++
Sbjct: 181 NTMIER--YCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFL 238
Query: 256 -----------LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD 304
LTA + AG M + N V + ++ YSKC G LD
Sbjct: 239 IENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKC---GRLD 295
Query: 305 CMKV-FEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSAC 363
+V F++ + DLV W TMIS + + D ++AL F++M +G +PD S V SAC
Sbjct: 296 DAQVIFDQTEKKDLVCWTTMISAYVE-SDYPQEALRVFEEMCCSGIKPDVVSMFSVISAC 354
Query: 364 SNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSL 423
+NL K VH+ I + + +S+NNAL+ MY+KCG L R VF+ MP N VS
Sbjct: 355 ANLGILDKAKWVHS-CIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSW 413
Query: 424 NSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKE 483
+SMI + HG ++L LF M QE++ PN +TF+ VL C+H+G VEEG+K F M +
Sbjct: 414 SSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTD 473
Query: 484 KFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAV 543
++ I P+ +H+ CMVDL GRA L EA +IE+MP + W +L+ ACR HG +EL
Sbjct: 474 EYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGK 533
Query: 544 KAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKV 603
AA + L+LEP + V++SN+YA RWE+ ++R+M E+ V K+ G S I + K
Sbjct: 534 FAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKS 593
Query: 604 HVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSE 663
H F+ D H EI+ + E++ K+K AGYVPD L DV EEK+ +L+HSE
Sbjct: 594 HEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLV---DVEEEEKKDLVLWHSE 650
Query: 664 KLAVAFGLISTKE-------GVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFH 716
KLA+ FGL++ ++ GV I +VKNLR+C DCH KL+S + REI VRD RFH
Sbjct: 651 KLALCFGLMNEEKEEEKDSCGV-IRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFH 709
Query: 717 CFKEGHCSCKDYW 729
C+K G CSC+DYW
Sbjct: 710 CYKNGLCSCRDYW 722
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 177/400 (44%), Gaps = 45/400 (11%)
Query: 72 TSFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGP 131
+F++ + F +D ++ AR +FDE+ D+V++NT+I + G
Sbjct: 136 VAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDE 195
Query: 132 AVRLFKEAREAGLCLDGFTLSGVIKAC---------------------REDVGLVMQLHC 170
A +LF+E +++ + D L ++ AC R D L+ L
Sbjct: 196 AFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTAL-- 253
Query: 171 FAVLCGYSCYAS--------------VCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEIS 216
+ G C V A+++ Y G L +A +F + + +D +
Sbjct: 254 VTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEK--KDLVC 311
Query: 217 WNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMI 276
W MI A + +EAL +F EM G+K D+ +M SV++A L L H +
Sbjct: 312 WTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIH 371
Query: 277 KSGFNWNPHVGSGLIDMYSKCAPRGMLDCMK-VFEEISEPDLVLWNTMISGFSQHEDLSE 335
+G + + LI+MY+KC G LD + VFE++ ++V W++MI+ S H + S
Sbjct: 372 VNGLESELSINNALINMYAKC---GGLDATRDVFEKMPRRNVVSWSSMINALSMHGEAS- 427
Query: 336 DALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNAL 395
DAL F M++ P++ +F V CS+ GK++ A + ++ +
Sbjct: 428 DALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCM 487
Query: 396 VAMYSKCGNLHDARRVFDTMP-EHNTVSLNSMITGYAQHG 434
V ++ + L +A V ++MP N V S+++ HG
Sbjct: 488 VDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHG 527
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 151/320 (47%), Gaps = 14/320 (4%)
Query: 21 NLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNP 80
N++ C ++ ++++ I+ + T+L +Y+ G +D AR FR +
Sbjct: 217 NIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR 276
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
N+F A++ K L A+ +FD+ + D+V + T+I+A+ A+R+F+E
Sbjct: 277 NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMC 336
Query: 141 EAGLCLDGFTLSGVIKACREDVGLVMQ---LHCFAVLCGYSCYASVCNAVLARYGGRGLL 197
+G+ D ++ VI AC ++G++ + +H + G S+ NA++ Y G L
Sbjct: 337 CSGIKPDVVSMFSVISAC-ANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGL 395
Query: 198 SEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLT 257
VF +M R+ +SW++MI A E +AL LF M + ++ + T VL
Sbjct: 396 DATRDVFEKMPR--RNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLY 453
Query: 258 AFTCLEDLAGGMQFHGRMIKSGFNWNP---HVGSGLIDMYSKCAPRGMLDCMKVFEEIS- 313
+ + G + M +N P H G ++D++ + + + ++V E +
Sbjct: 454 GCSHSGLVEEGKKIFASMTDE-YNITPKLEHYGC-MVDLFGR--ANLLREALEVIESMPV 509
Query: 314 EPDLVLWNTMISGFSQHEDL 333
++V+W +++S H +L
Sbjct: 510 ASNVVIWGSLMSACRIHGEL 529
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 401 bits (1030), Expect = e-112, Method: Compositional matrix adjust.
Identities = 240/698 (34%), Positives = 373/698 (53%), Gaps = 89/698 (12%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T ++L+ C S + G+ +H IKT + N +Y++C + A F
Sbjct: 127 TLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETM 186
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+ V++ +++ ++ G A+ F+
Sbjct: 187 EG------------------------------EKNNVTWTSMLTGYSQNGFAFKAIECFR 216
Query: 138 EAREAGLCLDGFTLSGVIKACRE----DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGG 193
+ R G + +T V+ AC VG+ Q+HC V G+ V +A++ Y
Sbjct: 217 DLRREGNQSNQYTFPSVLTACASVSACRVGV--QVHCCIVKSGFKTNIYVQSALIDMYA- 273
Query: 194 RGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREG--KEALVLFGEMVRMGMKIDMFT 251
+ E+ R E G D +SWN+MIV C R+G EAL +FG M MKID FT
Sbjct: 274 KCREMESARALLE-GMEVDDVVSWNSMIVGC--VRQGLIGEALSMFGRMHERDMKIDDFT 330
Query: 252 MASVLTAFTCLE-DLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD-CMKVF 309
+ S+L F ++ H ++K+G+ V + L+DMY+K RG++D +KVF
Sbjct: 331 IPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAK---RGIMDSALKVF 387
Query: 310 EEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSP 369
E + E D++ W +++G + H ++AL F +M+ G PD + V SA + L+
Sbjct: 388 EGMIEKDVISWTALVTG-NTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLL 446
Query: 370 SLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITG 429
G+QVH IKS PS+ +SVNN+LV MY+KCG+L DA +F++M + ++ +I G
Sbjct: 447 EFGQQVHGNYIKSGFPSS-LSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVG 505
Query: 430 YAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEP 489
YA++G+ +E+ Q+YF+ M+ +GI P
Sbjct: 506 YAKNGL-----------------------------------LEDAQRYFDSMRTVYGITP 530
Query: 490 EAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKF 549
+H++CM+DL GR+G + E+++ M +P + W A+L A RKHGN+E +AA
Sbjct: 531 GPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTL 590
Query: 550 LQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAE 609
++LEP+NAVPYV LSNMY++AGR +E+A V+RLM+ R + K+PGCSW++ KVH F++E
Sbjct: 591 MELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSE 650
Query: 610 DSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAF 669
D HP + EI+ + EM+ +K+AGY D+ +AL D+ E KE L YHSEKLAVAF
Sbjct: 651 DRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFAL---HDLDKEGKELGLAYHSEKLAVAF 707
Query: 670 GLISTKEGVPILVVKNLRICGDCHNAIKLIS--AISGR 705
GL+ G PI ++KNLR+CGDCH+A+KL+ AI G+
Sbjct: 708 GLLVVPSGAPIRIIKNLRVCGDCHSAMKLLVTFAIEGK 745
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 198/363 (54%), Gaps = 12/363 (3%)
Query: 185 NAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGK--EALVLFGEMVR 242
N ++ Y LS+A ++F ++ ISWNA+I G C+ G EA LF EM
Sbjct: 63 NTMIVAYSNSRRLSDAEKLFR--SNPVKNTISWNALI--SGYCKSGSKVEAFNLFWEMQS 118
Query: 243 MGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGM 302
G+K + +T+ SVL T L L G Q HG IK+GF+ + +V +GL+ MY++C + +
Sbjct: 119 DGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQC--KRI 176
Query: 303 LDCMKVFEEI-SEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTS 361
+ +FE + E + V W +M++G+SQ+ + A+ CF+D++R G + + +F V +
Sbjct: 177 SEAEYLFETMEGEKNNVTWTSMLTGYSQN-GFAFKAIECFRDLRREGNQSNQYTFPSVLT 235
Query: 362 ACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTV 421
AC+++S+ +G QVH +KS +N + V +AL+ MY+KC + AR + + M + V
Sbjct: 236 ACASVSACRVGVQVHCCIVKSGFKTN-IYVQSALIDMYAKCREMESARALLEGMEVDDVV 294
Query: 422 SLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMM 481
S NSMI G + G+ GE+L +F M + D+ ++ T S+L+ A + + + +
Sbjct: 295 SWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCL 354
Query: 482 KEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVEL 541
K G + +VD+ + G ++ A ++ E M + I W AL+ +G+ +
Sbjct: 355 IVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTGNTHNGSYDE 413
Query: 542 AVK 544
A+K
Sbjct: 414 ALK 416
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 401 bits (1030), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/618 (36%), Positives = 355/618 (57%), Gaps = 19/618 (3%)
Query: 116 YNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLV--MQLHCFAV 173
+N + A++ ++ L++ +G D F+ ++K+C V QLHC
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 174 LCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEA 233
G V A+++ Y GL+++A +VF E + + + +NA+I + +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 234 LVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDM 293
+F M G+ +D TM ++ T E L G HG+ +K G + V + I M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 294 YSKCAPRGMLDC-MKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPD 352
Y KC G ++ ++F+E+ L+ WN +ISG+SQ+ L+ D L ++ M+ +G PD
Sbjct: 201 YMKC---GSVEAGRRLFDEMPVKGLITWNAVISGYSQN-GLAYDVLELYEQMKSSGVCPD 256
Query: 353 DCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVF 412
+ V S+C++L + +G +V L + N V V+NA ++MY++CGNL AR VF
Sbjct: 257 PFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPN-VFVSNASISMYARCGNLAKARAVF 315
Query: 413 DTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVE 472
D MP + VS +MI Y HG+ L LF+ M++ I P+ F+ VLSAC+H+G +
Sbjct: 316 DIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTD 375
Query: 473 EGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGA 532
+G + F MK ++ +EP +H+SC+VDLLGRAG+L+EA IE+MP +P W ALLGA
Sbjct: 376 KGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGA 435
Query: 533 CRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKP 592
C+ H NV++A A K ++ EP+N YV++SN+Y+ + E ++ +MRER +KKP
Sbjct: 436 CKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKP 495
Query: 593 GCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEM-LRKMKQAGYVPDIRWALGKDEDVAA 651
G S+++ +VH+F+A D SH +E+H + E+ M+ AG + + E+V++
Sbjct: 496 GYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMD-----CDRGEEVSS 550
Query: 652 EEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRD 711
+E HSE+LA+AFG++++ G ILV+KNLR+C DCH +K +S I R+ VRD
Sbjct: 551 TTRE-----HSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRD 605
Query: 712 AHRFHCFKEGHCSCKDYW 729
A RFH FK+G CSCKDYW
Sbjct: 606 ASRFHYFKDGVCSCKDYW 623
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 200/474 (42%), Gaps = 46/474 (9%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
+F +LK C S +G+ LH K ++ +Y KCG + +AR F
Sbjct: 55 SFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFE-- 112
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
NP + S L V YN LI+ + + A +F+
Sbjct: 113 ENP-------------QSSQLS--------------VCYNALISGYTANSKVTDAAYMFR 145
Query: 138 EAREAGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
+E G+ +D T+ G++ C E + L LH V G +V N+ + Y G
Sbjct: 146 RMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCG 205
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
+ R+F EM + I+WNA+I Q + L L+ +M G+ D FT+ SV
Sbjct: 206 SVEAGRRLFDEM--PVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSV 263
Query: 256 LTAFTCLEDLAGGMQFHGRMIKS-GFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISE 314
L++ L G + G++++S GF N V + I MY++C + VF+ +
Sbjct: 264 LSSCAHLGAKKIGHEV-GKLVESNGFVPNVFVSNASISMYARCG--NLAKARAVFDIMPV 320
Query: 315 PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQ 374
LV W MI + H + E L+ F DM + G RPD F V SACS+ G +
Sbjct: 321 KSLVSWTAMIGCYGMH-GMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLE 379
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP-EHNTVSLNSMITGYAQH 433
+ + + LV + + G L +A ++MP E + +++ H
Sbjct: 380 LFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIH 439
Query: 434 GVEGESLQLFELMMQE--DIVPNNITFISVLSACAHTGKVEEG-QKYFNMMKEK 484
+++ + EL + + PNNI + ++S K +EG + MM+E+
Sbjct: 440 ----KNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRER 489
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/546 (41%), Positives = 323/546 (59%), Gaps = 10/546 (1%)
Query: 185 NAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMG 244
N ++ Y G L A +VF EM + R +WNAMI Q +E L LF EM +G
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPD--RKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLG 86
Query: 245 MKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD 304
D +T+ SV + L ++ G Q HG IK G + V S L MY + + D
Sbjct: 87 FSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGK--LQD 144
Query: 305 CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACS 364
V + +LV WNT+I G +Q+ E L ++ M+ +G RP+ +F V S+CS
Sbjct: 145 GEIVIRSMPVRNLVAWNTLIMGNAQN-GCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 203
Query: 365 NLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLN 424
+L+ G+Q+HA AIK S+ V+V ++L++MYSKCG L DA + F + + V +
Sbjct: 204 DLAIRGQGQQIHAEAIKIG-ASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWS 262
Query: 425 SMITGYAQHGVEGESLQLFELMM-QEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKE 483
SMI+ Y HG E+++LF M Q ++ N + F+++L AC+H+G ++G + F+MM E
Sbjct: 263 SMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVE 322
Query: 484 KFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAV 543
K+G +P KH++C+VDLLGRAG L++AE II +MP + W LL AC H N E+A
Sbjct: 323 KYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQ 382
Query: 544 KAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKV 603
+ + LQ++P+++ YV+L+N++ASA RW + + V++ MR++ VKK+ G SW + +V
Sbjct: 383 RVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEV 442
Query: 604 HVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSE 663
H F D S KEI+ Y+ E+ +MK GY PD L D+ EEKE L+ HSE
Sbjct: 443 HQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVL---HDMDEEEKESDLVQHSE 499
Query: 664 KLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHC 723
KLAVAF L+ EG PI ++KNLR+C DCH A K IS I REIT+RD RFH F G C
Sbjct: 500 KLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKC 559
Query: 724 SCKDYW 729
SC DYW
Sbjct: 560 SCGDYW 565
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 178/400 (44%), Gaps = 11/400 (2%)
Query: 60 LYSKCGTLDNARTSFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTL 119
+YSK G +A + N S N +I+ V+ L AR++FDE+P + ++N +
Sbjct: 3 MYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAM 62
Query: 120 IAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVI--KACREDVGLVMQLHCFAVLCGY 177
IA + + LF+E G D +TL V A V + Q+H + + G
Sbjct: 63 IAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL 122
Query: 178 SCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLF 237
V +++ Y G L + V M R+ ++WN +I+ Q + L L+
Sbjct: 123 ELDLVVNSSLAHMYMRNGKLQDGEIVIRSM--PVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 238 GEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKC 297
M G + + T +VL++ + L G Q H IK G + V S LI MYSKC
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC 240
Query: 298 APRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDM-QRAGFRPDDCSF 356
G D K F E + D V+W++MIS + H ++A+ F M ++ ++ +F
Sbjct: 241 GCLG--DAAKAFSEREDEDEVMWSSMISAYGFHGQ-GDEAIELFNTMAEQTNMEINEVAF 297
Query: 357 SCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP 416
+ ACS+ G ++ + ++ + +V + + G L A + +MP
Sbjct: 298 LNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMP 357
Query: 417 -EHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNN 455
+ + V ++++ H + ++F+ ++Q D PN+
Sbjct: 358 IKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQID--PND 395
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
Query: 371 LGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGY 430
LG A+A+ + +N L+ Y + G+L +AR+VFD MP+ + N+MI G
Sbjct: 7 LGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGL 66
Query: 431 AQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPE 490
Q E L LF M P+ T SV S A V GQ+ + K+G+E +
Sbjct: 67 IQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQ-IHGYTIKYGLELD 125
Query: 491 AKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHG 537
S + + R GKL++ E +I +MP + W L+ ++G
Sbjct: 126 LVVNSSLAHMYMRNGKLQDGEIVIRSMPV-RNLVAWNTLIMGNAQNG 171
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/651 (34%), Positives = 357/651 (54%), Gaps = 41/651 (6%)
Query: 19 FTNLLKQCI-SQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
F LL CI S+ + +HA IK+ + ++ N YSKCG+L++ R F
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
N++++N+++ K L A LF +P D ++N++++ A A+ F
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA 141
Query: 138 EAREAGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
+ G L+ ++ + V+ AC D+ +Q+H + + +A++ Y G
Sbjct: 142 MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCG 201
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
+++A RVF EMG+ R+ +SWN++I Q EAL +F M+ ++ D T+ASV
Sbjct: 202 NVNDAQRVFDEMGD--RNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASV 259
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGS-GLIDMYSKCA----PRGMLDCMKV-- 308
++A L + G + HGR++K+ N + S +DMY+KC+ R + D M +
Sbjct: 260 ISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 319
Query: 309 -----------------------FEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQ 345
F +++E ++V WN +I+G++Q+ + +E+AL F ++
Sbjct: 320 VIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGE-NEEALSLFCLLK 378
Query: 346 RAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIP-----SNRVSVNNALVAMYS 400
R P SF+ + AC++L+ LG Q H +K + + V N+L+ MY
Sbjct: 379 RESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYV 438
Query: 401 KCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFIS 460
KCG + + VF M E + VS N+MI G+AQ+G E+L+LF M++ P++IT I
Sbjct: 439 KCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIG 498
Query: 461 VLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFD 520
VLSAC H G VEEG+ YF+ M FG+ P H++CMVDLLGRAG LEEA+ +IE MP
Sbjct: 499 VLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQ 558
Query: 521 PGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVK 580
P S+ W +LL AC+ H N+ L A K L++EP N+ PYV+LSNMYA G+WE+ V+
Sbjct: 559 PDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVR 618
Query: 581 RLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMK 631
+ MR+ GV K+PGCSWI+I HVF+ +D SHP K+IH + ++ +M+
Sbjct: 619 KSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 194/425 (45%), Gaps = 48/425 (11%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
+F ++L C D++ G +H+L K+ Y+ + +YSKCG +++A+ F
Sbjct: 154 SFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEM 213
Query: 78 NNPNVFSYNAIIDACVKHS-----HLHLARELFDEIPRPDIVSYNTLIAAHAHRGE---- 128
+ NV S+N++I C + + L + + + + PD V+ ++I+A A
Sbjct: 214 GDRNVVSWNSLI-TCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVG 272
Query: 129 ---HGPAVRLFKEAREAGLC---LDGFTLSGVIKACR---EDVGLVMQLHCFAVLCGYSC 179
HG V+ K + L +D + IK R + + + + +++ GY+
Sbjct: 273 QEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAM 332
Query: 180 YASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGE 239
AS A L +F +M E R+ +SWNA+I Q E +EAL LF
Sbjct: 333 AASTKAARL--------------MFTKMAE--RNVVSWNALIAGYTQNGENEEALSLFCL 376
Query: 240 MVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNP------HVGSGLIDM 293
+ R + ++ A++L A L +L GMQ H ++K GF + VG+ LIDM
Sbjct: 377 LKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDM 436
Query: 294 YSKCA--PRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRP 351
Y KC G L VF ++ E D V WN MI GF+Q+ +AL F++M +G +P
Sbjct: 437 YVKCGCVEEGYL----VFRKMMERDCVSWNAMIIGFAQN-GYGNEALELFREMLESGEKP 491
Query: 352 DDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRV 411
D + V SAC + G+ + + + +V + + G L +A+ +
Sbjct: 492 DHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSM 551
Query: 412 FDTMP 416
+ MP
Sbjct: 552 IEEMP 556
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust.
Identities = 250/747 (33%), Positives = 385/747 (51%), Gaps = 75/747 (10%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF L C R G +H L +K ++ N Y++CG LD+AR
Sbjct: 136 TFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSAR------ 189
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLF- 136
++FDE+ ++VS+ ++I +A R AV LF
Sbjct: 190 -------------------------KVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFF 224
Query: 137 KEAREAGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGR 194
+ R+ + + T+ VI AC ED+ +++ F G + +A++ Y
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKC 284
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREG--KEALVLFGEMVRMGMKIDMFTM 252
+ A R+F E G D NAM A R+G +EAL +F M+ G++ D +M
Sbjct: 285 NAIDVAKRLFDEYGASNLDLC--NAM--ASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKC--------------- 297
S +++ + L ++ G HG ++++GF ++ + LIDMY KC
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 298 -------------APRGMLDCM-KVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQD 343
G +D + FE + E ++V WNT+ISG Q L E+A+ F
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGS-LFEEAIEVFCS 459
Query: 344 MQ-RAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKC 402
MQ + G D + + SAC +L + L K ++ K+ I + V + LV M+S+C
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLD-VRLGTTLVDMFSRC 518
Query: 403 GNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVL 462
G+ A +F+++ + + + I A G +++LF+ M+++ + P+ + F+ L
Sbjct: 519 GDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGAL 578
Query: 463 SACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPG 522
+AC+H G V++G++ F M + G+ PE H+ CMVDLLGRAG LEEA ++IE MP +P
Sbjct: 579 TACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPN 638
Query: 523 SIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRL 582
+ W +LL ACR GNVE+A AA K L P YV+LSN+YASAGRW + A V+
Sbjct: 639 DVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLS 698
Query: 583 MRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWA 642
M+E+G++K PG S IQI K H F + D SHP + I + E+ ++ G+VPD+
Sbjct: 699 MKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNV 758
Query: 643 LGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAI 702
L DV +EK L HSEKLA+A+GLIS+ +G I +VKNLR+C DCH+ K S +
Sbjct: 759 L---MDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKV 815
Query: 703 SGREITVRDAHRFHCFKEGHCSCKDYW 729
REI +RD +RFH ++G CSC D+W
Sbjct: 816 YNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 189/390 (48%), Gaps = 13/390 (3%)
Query: 192 GGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFT 251
G R LS A VF E E +N++I EA++LF M+ G+ D +T
Sbjct: 78 GTRESLSFAKEVF-ENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYT 136
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD-CMKVFE 310
L+A G+Q HG ++K G+ + V + L+ Y++C G LD KVF+
Sbjct: 137 FPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC---GELDSARKVFD 193
Query: 311 EISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQR-AGFRPDDCSFSCVTSACSNLSSP 369
E+SE ++V W +MI G+++ D ++DA+ F M R P+ + CV SAC+ L
Sbjct: 194 EMSERNVVSWTSMICGYARR-DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDL 252
Query: 370 SLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITG 429
G++V+A S I N + V +ALV MY KC + A+R+FD N N+M +
Sbjct: 253 ETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASN 311
Query: 430 YAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEP 489
Y + G+ E+L +F LMM + P+ I+ +S +S+C+ + G+ + G E
Sbjct: 312 YVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN-GFES 370
Query: 490 EAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKF 549
+ ++D+ + + + A RI + M + + W +++ ++G V+ A + F
Sbjct: 371 WDNICNALIDMYMKCHRQDTAFRIFDRMS-NKTVVTWNSIVAGYVENGEVDAAWET---F 426
Query: 550 LQLEPHNAVPYVMLSNMYASAGRWEESATV 579
+ N V + + + +EE+ V
Sbjct: 427 ETMPEKNIVSWNTIISGLVQGSLFEEAIEV 456
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 249/702 (35%), Positives = 366/702 (52%), Gaps = 43/702 (6%)
Query: 36 KSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAIIDACVKH 95
K +L K ++ +S +F+ G AR F + NV S+N ++ +K+
Sbjct: 38 KFFDSLQFKAIGSWNSIVSGYFS-----NGLPKEARQLFDEMSERNVVSWNGLVSGYIKN 92
Query: 96 SHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVI 155
+ AR +F+ +P ++VS+ ++ + G G A LF E G+I
Sbjct: 93 RMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLI 152
Query: 156 KACREDVG--LVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRD 213
R D L + V+ + +C G + EA +F EM E R+
Sbjct: 153 DDGRIDKARKLYDMMPVKDVVASTNMIGGLCR--------EGRVDEARLIFDEMRE--RN 202
Query: 214 EISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHG 273
++W MI Q A LF M K ++ + S+L +T + +F
Sbjct: 203 VVTWTTMITGYRQNNRVDVARKLFEVMPE---KTEV-SWTSMLLGYTLSGRIEDAEEFFE 258
Query: 274 RM-IKSGFNWNPH-VGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHE 331
M +K N VG G + SK +VF+ + + D W MI + + +
Sbjct: 259 VMPMKPVIACNAMIVGFGEVGEISKAR--------RVFDLMEDRDNATWRGMIKAY-ERK 309
Query: 332 DLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSV 391
+AL F MQ+ G RP S + S C+ L+S G+QVHA ++ + V V
Sbjct: 310 GFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDD-VYV 368
Query: 392 NNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDI 451
+ L+ MY KCG L A+ VFD + + NS+I+GYA HG+ E+L++F M
Sbjct: 369 ASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGT 428
Query: 452 VPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAE 511
+PN +T I++L+AC++ GK+EEG + F M+ KF + P +H+SC VD+LGRAG++++A
Sbjct: 429 MPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAM 488
Query: 512 RIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAG 571
+IE+M P + W ALLGAC+ H ++LA AA K + EP NA YV+LS++ AS
Sbjct: 489 ELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRS 548
Query: 572 RWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAED-SSHP---MIKEIHEYMGEML 627
+W + A V++ MR V K PGCSWI++ KVH+F +HP MI + E +L
Sbjct: 549 KWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLL 608
Query: 628 RKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLR 687
R +AGY PD L DV EEK L HSE+LAVA+GL+ EGVPI V+KNLR
Sbjct: 609 R---EAGYSPDCSHVL---HDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLR 662
Query: 688 ICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
+CGDCH AIKLIS ++ REI +RDA+RFH F G CSC+DYW
Sbjct: 663 VCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
+ ++L C + + G+ +HA ++ Y+++ +Y KCG L A+ F
Sbjct: 333 SLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRF 392
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAV 133
++ ++ +N+II H A ++F E+P P+ V+ ++ A ++ G+ +
Sbjct: 393 SSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGL 452
Query: 134 RLFKEAREAGLCL 146
+F E+ E+ C+
Sbjct: 453 EIF-ESMESKFCV 464
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 249/746 (33%), Positives = 384/746 (51%), Gaps = 75/746 (10%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF L C R G +H L +K ++ N Y++CG LD+AR
Sbjct: 136 TFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSAR------ 189
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLF- 136
++FDE+ ++VS+ ++I +A R AV LF
Sbjct: 190 -------------------------KVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFF 224
Query: 137 KEAREAGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGR 194
+ R+ + + T+ VI AC ED+ +++ F G + +A++ Y
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKC 284
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREG--KEALVLFGEMVRMGMKIDMFTM 252
+ A R+F E G D NAM A R+G +EAL +F M+ G++ D +M
Sbjct: 285 NAIDVAKRLFDEYGASNLDLC--NAM--ASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKC--------------- 297
S +++ + L ++ G HG ++++GF ++ + LIDMY KC
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 298 -------------APRGMLDCM-KVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQD 343
G +D + FE + E ++V WNT+ISG Q L E+A+ F
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGS-LFEEAIEVFCS 459
Query: 344 MQ-RAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKC 402
MQ + G D + + SAC +L + L K ++ K+ I + V + LV M+S+C
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLD-VRLGTTLVDMFSRC 518
Query: 403 GNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVL 462
G+ A +F+++ + + + I A G +++LF+ M+++ + P+ + F+ L
Sbjct: 519 GDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGAL 578
Query: 463 SACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPG 522
+AC+H G V++G++ F M + G+ PE H+ CMVDLLGRAG LEEA ++IE MP +P
Sbjct: 579 TACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPN 638
Query: 523 SIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRL 582
+ W +LL ACR GNVE+A AA K L P YV+LSN+YASAGRW + A V+
Sbjct: 639 DVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLS 698
Query: 583 MRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWA 642
M+E+G++K PG S IQI K H F + D SHP + I + E+ ++ G+VPD+
Sbjct: 699 MKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNV 758
Query: 643 LGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAI 702
L DV +EK L HSEKLA+A+GLIS+ +G I +VKNLR+C DCH+ K S +
Sbjct: 759 L---MDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKV 815
Query: 703 SGREITVRDAHRFHCFKEGHCSCKDY 728
REI +RD +RFH ++G CSC D+
Sbjct: 816 YNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 189/390 (48%), Gaps = 13/390 (3%)
Query: 192 GGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFT 251
G R LS A VF E E +N++I EA++LF M+ G+ D +T
Sbjct: 78 GTRESLSFAKEVF-ENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYT 136
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD-CMKVFE 310
L+A G+Q HG ++K G+ + V + L+ Y++C G LD KVF+
Sbjct: 137 FPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC---GELDSARKVFD 193
Query: 311 EISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQR-AGFRPDDCSFSCVTSACSNLSSP 369
E+SE ++V W +MI G+++ D ++DA+ F M R P+ + CV SAC+ L
Sbjct: 194 EMSERNVVSWTSMICGYARR-DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDL 252
Query: 370 SLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITG 429
G++V+A S I N + V +ALV MY KC + A+R+FD N N+M +
Sbjct: 253 ETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASN 311
Query: 430 YAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEP 489
Y + G+ E+L +F LMM + P+ I+ +S +S+C+ + G+ + G E
Sbjct: 312 YVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN-GFES 370
Query: 490 EAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKF 549
+ ++D+ + + + A RI + M + + W +++ ++G V+ A + F
Sbjct: 371 WDNICNALIDMYMKCHRQDTAFRIFDRMS-NKTVVTWNSIVAGYVENGEVDAAWET---F 426
Query: 550 LQLEPHNAVPYVMLSNMYASAGRWEESATV 579
+ N V + + + +EE+ V
Sbjct: 427 ETMPEKNIVSWNTIISGLVQGSLFEEAIEV 456
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 391 bits (1004), Expect = e-108, Method: Compositional matrix adjust.
Identities = 241/639 (37%), Positives = 352/639 (55%), Gaps = 57/639 (8%)
Query: 98 LHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCL-DGFTLSGVIK 156
L AR L P PD +NTL+ ++ E +V +F E G D F+ + VIK
Sbjct: 55 LPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIK 114
Query: 157 ACREDVGLV--MQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDE 214
A L Q+HC A+ G + V ++ YGG G + A +VF EM + +
Sbjct: 115 AVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQ--PNL 172
Query: 215 ISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGR 274
++WNA+I AC + D+AG + +
Sbjct: 173 VAWNAVITACFRG-----------------------------------NDVAGAREIFDK 197
Query: 275 M-IKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMK-VFEEISEPDLVLWNTMISGFSQHED 332
M +++ +WN M + G L+ K +F E+ D V W+TMI G + +
Sbjct: 198 MLVRNHTSWNV--------MLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGS 249
Query: 333 LSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVN 392
+E + + F+++QRAG P++ S + V SACS S GK +H K+ S VSVN
Sbjct: 250 FNE-SFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGY-SWIVSVN 307
Query: 393 NALVAMYSKCGNLHDARRVFDTMPEHN-TVSLNSMITGYAQHGVEGESLQLFELMMQEDI 451
NAL+ MYS+CGN+ AR VF+ M E VS SMI G A HG E+++LF M +
Sbjct: 308 NALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGV 367
Query: 452 VPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAE 511
P+ I+FIS+L AC+H G +EEG+ YF+ MK + IEPE +H+ CMVDL GR+GKL++A
Sbjct: 368 TPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAY 427
Query: 512 RIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAG 571
I MP P +I W LLGAC HGN+ELA + + +L+P+N+ V+LSN YA+AG
Sbjct: 428 DFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAG 487
Query: 572 RWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMK 631
+W++ A++++ M + +KK S +++ ++ F A + + E HE + E++ ++K
Sbjct: 488 KWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLK 547
Query: 632 -QAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLRICG 690
+AGY P++ AL DV EEKE ++ HSEKLA+AF L +G I +VKNLRIC
Sbjct: 548 DEAGYTPEVASAL---YDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICR 604
Query: 691 DCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
DCH +KL S + G EI VRD +RFH FK+G CSC+DYW
Sbjct: 605 DCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 157/356 (44%), Gaps = 48/356 (13%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
+F ++K + R + TG +H +K + ++ +Y CG ++ AR F
Sbjct: 108 SFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEM 167
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFD------------------------------- 106
+ PN+ ++NA+I AC + + + ARE+FD
Sbjct: 168 HQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFS 227
Query: 107 EIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLVM 166
E+P D VS++T+I AH G + F+E + AG+ + +L+GV+ AC +
Sbjct: 228 EMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEF 287
Query: 167 Q--LHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVAC 224
LH F GYS SV NA++ Y G + A VF M E R +SW +MI
Sbjct: 288 GKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEK-RCIVSWTSMIAGL 346
Query: 225 GQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNP 284
+G+EA+ LF EM G+ D + S+L A + + G + M K ++ P
Sbjct: 347 AMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEM-KRVYHIEP 405
Query: 285 ---HVGSGLIDMYSKCAPRGMLDCMKVFEEISE----PDLVLWNTMISGFSQHEDL 333
H G ++D+Y + K ++ I + P ++W T++ S H ++
Sbjct: 406 EIEHYGC-MVDLYGRSGK-----LQKAYDFICQMPIPPTAIVWRTLLGACSSHGNI 455
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 126/495 (25%), Positives = 206/495 (41%), Gaps = 61/495 (12%)
Query: 21 NLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTL--LYSKCGTLDNARTSFRLTN 78
+LL C + R ++ +H L+IK + +Y + L S L AR
Sbjct: 10 SLLNSCKNLRALT---QIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFP 66
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPR-----PDIVSYNTLIAA----------- 122
P+ F +N ++ + H + +F E+ R PD S+ +I A
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 123 --HAHRGEHGPAVRLFKEAREAGL-----CLDG-------------FTLSGVIKAC--RE 160
H +HG LF G+ C++ + VI AC
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN 186
Query: 161 DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAM 220
DV ++ ++ ++ + N +LA Y G L A R+F EM RD++SW+ M
Sbjct: 187 DVAGAREIFDKMLVRNHTSW----NVMLAGYIKAGELESAKRIFSEMPH--RDDVSWSTM 240
Query: 221 IVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGF 280
IV E+ + F E+ R GM + ++ VL+A + G HG + K+G+
Sbjct: 241 IVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGY 300
Query: 281 NWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPD-LVLWNTMISGFSQHEDLSEDALI 339
+W V + LIDMYS+C M VFE + E +V W +MI+G + H E+A+
Sbjct: 301 SWIVSVNNALIDMYSRCGNVPMARL--VFEGMQEKRCIVSWTSMIAGLAMHGQ-GEEAVR 357
Query: 340 CFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMY 399
F +M G PD SF + ACS+ G+ + + + +V +Y
Sbjct: 358 LFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLY 417
Query: 400 SKCGNLHDARRVFDTMPEHNT-VSLNSMITGYAQHGVEGESLQLFELMMQE--DIVPNNI 456
+ G L A MP T + +++ + HG +++L E + Q ++ PNN
Sbjct: 418 GRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHG----NIELAEQVKQRLNELDPNNS 473
Query: 457 TFISVLS-ACAHTGK 470
+ +LS A A GK
Sbjct: 474 GDLVLLSNAYATAGK 488
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 162/350 (46%), Gaps = 22/350 (6%)
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEP 315
L+ ++L Q HG IK G + + + LI + + ++ EP
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 68
Query: 316 DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFR-PDDCSFSCVTSACSNLSSPSLGKQ 374
D ++NT++ G+S+ D +++ F +M R GF PD SF+ V A N S G Q
Sbjct: 69 DAFMFNTLVRGYSE-SDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHG 434
+H A+K + S+ + V L+ MY CG + AR+VFD M + N V+ N++IT +
Sbjct: 128 MHCQALKHGLESH-LFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN 186
Query: 435 VEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHF 494
+ ++F+ M+ V N+ ++ +L+ G++E ++ F+ M + + +
Sbjct: 187 DVAGAREIFDKML----VRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVS-----W 237
Query: 495 SCMVDLLGRAGKLEEA---ERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ 551
S M+ + G E+ R ++ P + +L AC + G+ E K + F++
Sbjct: 238 STMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFG-KILHGFVE 296
Query: 552 LEPHNAVPYV--MLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQI 599
++ + V L +MY+ G + + RL+ E +K+ SW +
Sbjct: 297 KAGYSWIVSVNNALIDMYSRCG----NVPMARLVFEGMQEKRCIVSWTSM 342
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/564 (39%), Positives = 335/564 (59%), Gaps = 10/564 (1%)
Query: 166 MQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACG 225
+QLH + V G S V N ++ Y L ++ R F + + S A
Sbjct: 35 LQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFA-- 92
Query: 226 QCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPH 285
Q +L +M+ ++ D + S + L G H +K+G++ +
Sbjct: 93 QNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVF 152
Query: 286 VGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQ 345
VGS L+DMY+KC ++ K+F+E+ + ++V W+ M+ G++Q + +E+AL F++
Sbjct: 153 VGSSLVDMYAKCGE--IVYARKMFDEMPQRNVVTWSGMMYGYAQMGE-NEEALWLFKEAL 209
Query: 346 RAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNL 405
+D SFS V S C+N + LG+Q+H L+IKS + V ++LV++YSKCG
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSF-DSSSFVGSSLVSLYSKCGVP 268
Query: 406 HDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSAC 465
A +VF+ +P N N+M+ YAQH + ++LF+ M + PN ITF++VL+AC
Sbjct: 269 EGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNAC 328
Query: 466 AHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIE 525
+H G V+EG+ YF+ MKE IEP KH++ +VD+LGRAG+L+EA +I MP DP
Sbjct: 329 SHAGLVDEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESV 387
Query: 526 WAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRE 585
W ALL +C H N ELA AA+K +L P ++ ++ LSN YA+ GR+E++A ++L+R+
Sbjct: 388 WGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRD 447
Query: 586 RGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGK 645
RG KK+ G SW++ NKVH F A + H KEI+E + E+ +M++AGY+ D + L
Sbjct: 448 RGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVL-- 505
Query: 646 DEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGR 705
+V +EK + + YHSE+LA+AFGLI+ PI V+KNLR+CGDCHNAIK +S + R
Sbjct: 506 -REVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRR 564
Query: 706 EITVRDAHRFHCFKEGHCSCKDYW 729
I VRD +RFH F++G CSC DYW
Sbjct: 565 VIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 174/324 (53%), Gaps = 9/324 (2%)
Query: 268 GMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGF 327
G+Q HG ++KSG + P V + LI+ YSK + D + FE+ + W+++IS F
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSK--SQLPFDSRRAFEDSPQKSSTTWSSIISCF 91
Query: 328 SQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSN 387
+Q+E L +L + M RPDD T +C+ LS +G+ VH L++K+ ++
Sbjct: 92 AQNE-LPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDAD 150
Query: 388 RVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMM 447
V V ++LV MY+KCG + AR++FD MP+ N V+ + M+ GYAQ G E+L LF+ +
Sbjct: 151 -VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 448 QEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKL 507
E++ N+ +F SV+S CA++ +E G++ + + K + + S +V L + G
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQ-IHGLSIKSSFDSSSFVGSSLVSLYSKCGVP 268
Query: 508 EEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAAN--KFLQLEPHNAVPYVMLSN 565
E A ++ +P I W A+L A +H + + ++ K ++P N + ++ + N
Sbjct: 269 EGAYQVFNEVPVKNLGI-WNAMLKAYAQHSHTQKVIELFKRMKLSGMKP-NFITFLNVLN 326
Query: 566 MYASAGRWEESATVKRLMRERGVK 589
+ AG +E M+E ++
Sbjct: 327 ACSHAGLVDEGRYYFDQMKESRIE 350
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 211/473 (44%), Gaps = 53/473 (11%)
Query: 21 NLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNP 80
+LL R G LH +K+ + ++N+ YSK
Sbjct: 20 DLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSK----------------- 62
Query: 81 NVFSYNAIIDACVKHSHLHL-ARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEA 139
S L +R F++ P+ +++++I+ A ++ K+
Sbjct: 63 ---------------SQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKM 107
Query: 140 REAGLCLDGFTLSGVIKAC----REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
L D L K+C R D+G +HC ++ GY V ++++ Y G
Sbjct: 108 MAGNLRPDDHVLPSATKSCAILSRCDIG--RSVHCLSMKTGYDADVFVGSSLVDMYAKCG 165
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
+ A ++F EM + R+ ++W+ M+ Q E +EAL LF E + + ++ ++ +SV
Sbjct: 166 EIVYARKMFDEMPQ--RNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSV 223
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCA-PRGMLDCMKVFEEISE 314
++ L G Q HG IKS F+ + VGS L+ +YSKC P G +VF E+
Sbjct: 224 ISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEG---AYQVFNEVPV 280
Query: 315 PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQ 374
+L +WN M+ ++QH ++ + F+ M+ +G +P+ +F V +ACS+ G+
Sbjct: 281 KNLGIWNAMLKAYAQHSH-TQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRY 339
Query: 375 VHALAIKSDI-PSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSL-NSMITGYAQ 432
+S I P+++ +LV M + G L +A V MP T S+ +++T
Sbjct: 340 YFDQMKESRIEPTDKHYA--SLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTV 397
Query: 433 HGVEGESLQLFELMMQEDIVP-NNITFISVLSACAHTGKVEEGQKYFNMMKEK 484
H + L F ++ P ++ IS+ +A A G+ E+ K +++++
Sbjct: 398 H--KNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDR 448
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 386 bits (992), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/579 (37%), Positives = 325/579 (56%), Gaps = 43/579 (7%)
Query: 183 VCNAVLAR-YGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMV 241
V N L R Y G + + +FH+ + D + A I +A +L+ +++
Sbjct: 65 VLNLKLHRAYASHGKIRHSLALFHQTIDP--DLFLFTAAINTASINGLKDQAFLLYVQLL 122
Query: 242 RMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSK----- 296
+ + FT +S+L + + G H ++K G +P+V +GL+D+Y+K
Sbjct: 123 SSEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVV 178
Query: 297 --------------CAPRGMLDCMK----------VFEEISEPDLVLWNTMISGFSQHED 332
+ M+ C +F+ + E D+V WN MI G++QH
Sbjct: 179 SAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQH-G 237
Query: 333 LSEDALICFQDMQRAGF-RPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSV 391
DAL+ FQ + G +PD+ + SACS + + G+ +H S I N V V
Sbjct: 238 FPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLN-VKV 296
Query: 392 NNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLF-ELMMQED 450
L+ MYSKCG+L +A VF+ P + V+ N+MI GYA HG ++L+LF E+
Sbjct: 297 CTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITG 356
Query: 451 IVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEA 510
+ P +ITFI L ACAH G V EG + F M +++GI+P+ +H+ C+V LLGRAG+L+ A
Sbjct: 357 LQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRA 416
Query: 511 ERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASA 570
I+ M D S+ W+++LG+C+ HG+ L + A + L N+ YV+LSN+YAS
Sbjct: 417 YETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASV 476
Query: 571 GRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKM 630
G +E A V+ LM+E+G+ K+PG S I+I+NKVH F A D H KEI+ + ++ ++
Sbjct: 477 GDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERI 536
Query: 631 KQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLRICG 690
K GYVP+ L +D+ EKE+ L HSE+LA+A+GLISTK G P+ + KNLR+C
Sbjct: 537 KSHGYVPNTNTVL---QDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCS 593
Query: 691 DCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
DCH KLIS I+GR+I +RD +RFH F +G CSC D+W
Sbjct: 594 DCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 167/414 (40%), Gaps = 60/414 (14%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF++LLK C ++ +GK +H +K + Y++ +Y+K G + +A+ F
Sbjct: 132 TFSSLLKSCSTK----SGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRM 187
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
++ S A+I K ++ AR LFD + DIVS+N +I +A G A+ LF+
Sbjct: 188 PERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQ 247
Query: 138 EAREAGLCL-DGFTLSGVIKACREDVGLVMQ--LHCFAVLCGYSCYASVCNAVLARYGGR 194
+ G D T+ + AC + L +H F VC ++ Y
Sbjct: 248 KLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKC 307
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRM-GMKIDMFTMA 253
G L EA VF++ +D ++WNAMI ++AL LF EM + G++ T
Sbjct: 308 GSLEEAVLVFNDTPR--KDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFI 365
Query: 254 SVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGML-DCMKVFEEI 312
L A CA G++ + +++FE +
Sbjct: 366 GTLQA--------------------------------------CAHAGLVNEGIRIFESM 387
Query: 313 SE-----PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLS 367
+ P + + ++S + L ++ ++ D +S V +C
Sbjct: 388 GQEYGIKPKIEHYGCLVSLLGRAGQLKR----AYETIKNMNMDADSVLWSSVLGSCKLHG 443
Query: 368 SPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTV 421
LGK++ I +I ++ + V L +Y+ G+ +V + M E V
Sbjct: 444 DFVLGKEIAEYLIGLNIKNSGIYV--LLSNIYASVGDYEGVAKVRNLMKEKGIV 495
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 386 bits (991), Expect = e-107, Method: Compositional matrix adjust.
Identities = 231/714 (32%), Positives = 375/714 (52%), Gaps = 49/714 (6%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF +L+ C D++ GK +H ++ + N +Y KCG + +AR
Sbjct: 198 TFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL----- 252
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
LFD +PR DI+S+N +I+ + G + LF
Sbjct: 253 --------------------------LFDRMPRRDIISWNAMISGYFENGMCHEGLELFF 286
Query: 138 EAREAGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
R + D TL+ VI AC D L +H + + G++ SVCN++ Y G
Sbjct: 287 AMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAG 346
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
EA ++F M +D +SW MI +A+ + M + +K D T+A+V
Sbjct: 347 SWREAEKLFSRMER--KDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAV 404
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEP 315
L+A L DL G++ H IK+ V + LI+MYSKC + + + +F I
Sbjct: 405 LSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKC--KCIDKALDIFHNIPRK 462
Query: 316 DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQV 375
+++ W ++I+G + E ALI + M+ +P+ + + +AC+ + + GK++
Sbjct: 463 NVISWTSIIAGLRLNNRCFE-ALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEI 520
Query: 376 HALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGV 435
HA +++ + + + NAL+ MY +CG ++ A F++ + + S N ++TGY++ G
Sbjct: 521 HAHVLRTGVGLDDF-LPNALLDMYVRCGRMNTAWSQFNSQKK-DVTSWNILLTGYSERGQ 578
Query: 436 EGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFS 495
++LF+ M++ + P+ ITFIS+L C+ + V +G YF+ M E +G+ P KH++
Sbjct: 579 GSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYA 637
Query: 496 CMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPH 555
C+VDLLGRAG+L+EA + I+ MP P W ALL ACR H ++L +A +L+
Sbjct: 638 CVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKK 697
Query: 556 NAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPM 615
+ Y++L N+YA G+W E A V+R+M+E G+ GCSW+++ KVH F+++D HP
Sbjct: 698 SVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQ 757
Query: 616 IKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLY--HSEKLAVAFGLIS 673
KEI+ + KM + G + + + E R ++ HSE+ A+AFGLI+
Sbjct: 758 TKEINTVLEGFYEKMSEVGLTK-----ISESSSMDETEISRDEIFCGHSERKAIAFGLIN 812
Query: 674 TKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKD 727
T G+PI V KNL +C +CH+ +K IS REI+VRDA FH FK+G CSC D
Sbjct: 813 TVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 135/476 (28%), Positives = 229/476 (48%), Gaps = 27/476 (5%)
Query: 86 NAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLF-KEAREAGL 144
NA + V+ +L A +F ++ ++ S+N L+ +A +G A+ L+ + G+
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 145 CLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWR 202
D +T V++ C D+ ++H V GY V NA++ Y G + A
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 203 VFHEMGEGCRDEISWNAMIVAC---GQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAF 259
+F M RD ISWNAMI G C EG E LF M + + D+ T+ SV++A
Sbjct: 253 LFDRMPR--RDIISWNAMISGYFENGMCHEGLE---LFFAMRGLSVDPDLMTLTSVISAC 307
Query: 260 TCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVL 319
L D G H +I +GF + V + L MY + K+F + D+V
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAG--SWREAEKLFSRMERKDIVS 365
Query: 320 WNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALA 379
W TMISG+ ++ L + A+ ++ M + +PD+ + + V SAC+ L G ++H LA
Sbjct: 366 WTTMISGY-EYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLA 424
Query: 380 IKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGES 439
IK+ + S + NN L+ MYSKC + A +F +P N +S S+I G + E+
Sbjct: 425 IKARLISYVIVANN-LINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEA 483
Query: 440 LQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQK-YFNMMKEKFGIE---PEAKHFS 495
L +F M+ + PN IT + L+ACA G + G++ + ++++ G++ P A
Sbjct: 484 L-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNA---- 538
Query: 496 CMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ 551
++D+ R G++ A + D S W LL + G + V+ ++ ++
Sbjct: 539 -LLDMYVRCGRMNTAWSQFNSQKKDVTS--WNILLTGYSERGQGSMVVELFDRMVK 591
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 142/296 (47%), Gaps = 8/296 (2%)
Query: 225 GQCREGK--EALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNW 282
G C GK EA+ L M + + +D +++ G + + + S +
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 283 NPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQ 342
+G+ + M+ + ++D VF ++SE +L WN ++ G+++ E + +
Sbjct: 128 GVELGNAFLAMFVRFG--NLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 343 DMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKC 402
+ G +PD +F CV C + + GK+VH ++ + + V NAL+ MY KC
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELD-IDVVNALITMYVKC 244
Query: 403 GNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVL 462
G++ AR +FD MP + +S N+MI+GY ++G+ E L+LF M + P+ +T SV+
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304
Query: 463 SACAHTGKVEEGQK-YFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETM 517
SAC G G+ + ++ F ++ + + + AG EAE++ M
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISV--CNSLTQMYLNAGSWREAEKLFSRM 358
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 227/628 (36%), Positives = 345/628 (54%), Gaps = 44/628 (7%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TFT+LL C + D+ G H++ IK +
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLA----------------------------- 460
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
N+F NA++D K L AR++F+ + D V++NT+I ++ A LFK
Sbjct: 461 --KNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFK 518
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVM--QLHCFAVLCGYSCYASVCNAVLARYGGRG 195
G+ DG L+ +KAC GL Q+HC +V CG ++++ Y G
Sbjct: 519 RMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCG 578
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
++ +A +VF + E +S NA+I Q +EA+VLF EM+ G+ T A++
Sbjct: 579 IIKDARKVFSSLPEW--SVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATI 635
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNW-NPHVGSGLIDMYSKCAPRGMLDCMKVFEEISE 314
+ A E L G QFHG++ K GF+ ++G L+ MY RGM + +F E+S
Sbjct: 636 VEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMN--SRGMTEACALFSELSS 693
Query: 315 P-DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGK 373
P +VLW M+SG SQ+ E+AL +++M+ G PD +F V CS LSS G+
Sbjct: 694 PKSIVLWTGMMSGHSQN-GFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGR 752
Query: 374 QVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH-NTVSLNSMITGYAQ 432
+H+L + ++ +N L+ MY+KCG++ + +VFD M N VS NS+I GYA+
Sbjct: 753 AIHSLIFHLAHDLDELT-SNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAK 811
Query: 433 HGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAK 492
+G ++L++F+ M Q I+P+ ITF+ VL+AC+H GKV +G+K F MM ++GIE
Sbjct: 812 NGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVD 871
Query: 493 HFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQL 552
H +CMVDLLGR G L+EA+ IE P + W++LLGACR HG+ +A K ++L
Sbjct: 872 HVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIEL 931
Query: 553 EPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSS 612
EP N+ YV+LSN+YAS G WE++ ++++MR+RGVKK PG SWI ++ + H+F A D S
Sbjct: 932 EPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKS 991
Query: 613 HPMIKEIHEYMGEMLRKMKQAGYV-PDI 639
H I +I ++ ++ MK V PDI
Sbjct: 992 HSEIGKIEMFLEDLYDLMKDDAVVNPDI 1019
Score = 234 bits (597), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 157/569 (27%), Positives = 274/569 (48%), Gaps = 54/569 (9%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF+ +L C + ++ G+ +H IK + ++Y +Y+KC + +AR F
Sbjct: 162 TFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI 221
Query: 78 NNPNV-----------------------------------FSYNAIIDACVKHSHLHLAR 102
+PN ++ +I+ ++ L AR
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDAR 281
Query: 103 ELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKA----C 158
LF E+ PD+V++N +I+ H RG A+ F R++ + TL V+ A
Sbjct: 282 LLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 159 REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWN 218
D+GLV +H A+ G + V +++++ Y + A +VF + E ++++ WN
Sbjct: 342 NLDLGLV--VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE--KNDVFWN 397
Query: 219 AMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKS 278
AMI E + + LF +M G ID FT S+L+ DL G QFH +IK
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK 457
Query: 279 GFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDAL 338
N VG+ L+DMY+KC + D ++FE + + D V WNT+I + Q E+ SE A
Sbjct: 458 KLAKNLFVGNALVDMYAKCG--ALEDARQIFERMCDRDNVTWNTIIGSYVQDENESE-AF 514
Query: 339 ICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAM 398
F+ M G D + AC+++ GKQVH L++K + + + ++L+ M
Sbjct: 515 DLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRD-LHTGSSLIDM 573
Query: 399 YSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITF 458
YSKCG + DAR+VF ++PE + VS+N++I GY+Q+ +E E++ LF+ M+ + P+ ITF
Sbjct: 574 YSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITF 632
Query: 459 ISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLG---RAGKLEEAERIIE 515
+++ AC + G ++ + ++ G E ++ + LLG + + EA +
Sbjct: 633 ATIVEACHKPESLTLGTQFHGQITKR-GFSSEGEYLG--ISLLGMYMNSRGMTEACALFS 689
Query: 516 TMPFDPGSIEWAALLGACRKHGNVELAVK 544
+ + W ++ ++G E A+K
Sbjct: 690 ELSSPKSIVLWTGMMSGHSQNGFYEEALK 718
Score = 182 bits (461), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 146/512 (28%), Positives = 239/512 (46%), Gaps = 31/512 (6%)
Query: 46 FIPHSTYLSNHFTLLYSKCGTLDNARTSF-RLTNN---PNVFSYNAIIDACVKHSHLHLA 101
F+ N +YS G SF L N PN F+++ ++ C + +++
Sbjct: 120 FLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFG 179
Query: 102 RELFDEIPRPDIV--SY--NTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKA 157
R++ + + + SY L+ +A A R+F+ + SG +KA
Sbjct: 180 RQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKA 239
Query: 158 C--REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEI 215
E V + ++ + + +V N Y G L +A +F EM D +
Sbjct: 240 GLPEEAVLVFERMRDEGHRPDHLAFVTVINT----YIRLGKLKDARLLFGEMSS--PDVV 293
Query: 216 SWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRM 275
+WN MI G+ A+ F M + +K T+ SVL+A + +L G+ H
Sbjct: 294 AWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEA 353
Query: 276 IKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSE 335
IK G N +VGS L+ MYSKC M KVFE + E + V WN MI G++ H S
Sbjct: 354 IKLGLASNIYVGSSLVSMYSKCEK--MEAAAKVFEALEEKNDVFWNAMIRGYA-HNGESH 410
Query: 336 DALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNAL 395
+ F DM+ +G+ DD +F+ + S C+ +G Q H++ IK + N + V NAL
Sbjct: 411 KVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKN-LFVGNAL 469
Query: 396 VAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNN 455
V MY+KCG L DAR++F+ M + + V+ N++I Y Q E E+ LF+ M IV +
Sbjct: 470 VDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDG 529
Query: 456 ITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIE 515
S L AC H + +G K + + K G++ + S ++D+ + G +++A ++
Sbjct: 530 ACLASTLKACTHVHGLYQG-KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS 588
Query: 516 TMPFDPGSIEWAAL----LGACRKHGNVELAV 543
++P EW+ + L A N+E AV
Sbjct: 589 SLP------EWSVVSMNALIAGYSQNNLEEAV 614
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 194/433 (44%), Gaps = 79/433 (18%)
Query: 168 LHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQC 227
+H +++ G + NA++ Y +S A + F + +D +WN+M+
Sbjct: 82 VHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE---KDVTAWNSMLSMYSSI 138
Query: 228 REGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVG 287
+ + L F + + + FT + VL+ ++ G Q H MIK G N + G
Sbjct: 139 GKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCG 198
Query: 288 SGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRA 347
L+DMY+KC + D +VFE I +P+ V W + SG+ + L E+A++ F+ M+
Sbjct: 199 GALVDMYAKCDR--ISDARRVFEWIVDPNTVCWTCLFSGYVK-AGLPEEAVLVFERMRDE 255
Query: 348 GFRPDDCSFSCVTSACSNL-------------SSP------------------------- 369
G RPD +F V + L SSP
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYF 315
Query: 370 -------------SLGKQVHALAIKSDIP--------------SNRVSVNNALVAMYSKC 402
+LG + A+ I +++ ++ + V ++LV+MYSKC
Sbjct: 316 FNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC 375
Query: 403 GNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVL 462
+ A +VF+ + E N V N+MI GYA +G + ++LF M ++ TF S+L
Sbjct: 376 EKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL 435
Query: 463 SACAHTGKVEEGQKYFNMMKEKFGIEPEAKHF---SCMVDLLGRAGKLEEAERIIETMPF 519
S CA + +E G ++ +++ +K AK+ + +VD+ + G LE+A +I E M
Sbjct: 436 STCAASHDLEMGSQFHSIIIKK----KLAKNLFVGNALVDMYAKCGALEDARQIFERMC- 490
Query: 520 DPGSIEWAALLGA 532
D ++ W ++G+
Sbjct: 491 DRDNVTWNTIIGS 503
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 121/238 (50%), Gaps = 10/238 (4%)
Query: 268 GMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGF 327
G H + + G + +G+ ++D+Y+KCA + K F+ + E D+ WN+M+S +
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAE--KQFDFL-EKDVTAWNSMLSMY 135
Query: 328 SQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSN 387
S + L F + P+ +FS V S C+ ++ G+Q+H IK + N
Sbjct: 136 SSIGKPGK-VLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 388 RVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMM 447
ALV MY+KC + DARRVF+ + + NTV + +GY + G+ E++ +FE M
Sbjct: 195 SY-CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 448 QEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAG 505
E P+++ F++V++ GK+++ + F M P+ ++ M+ G+ G
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKRG 306
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/632 (34%), Positives = 352/632 (55%), Gaps = 38/632 (6%)
Query: 4 FPCXXXXXXXXXXXTFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSK 63
F C +F+ LLK S + G+ +H L IK + Y+ + +Y+K
Sbjct: 89 FTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAK 148
Query: 64 CGTLDNARTSFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAH 123
C +++A E F EI P+ VS+N LIA
Sbjct: 149 CERVEDAF-------------------------------EAFKEISEPNSVSWNALIAGF 177
Query: 124 AHRGEHGPAVRLFKEAR-EAGLCLDGFTLSGVIKACREDV--GLVMQLHCFAVLCGYSCY 180
+ A L +A + +D T + ++ + + L+ Q+H + G
Sbjct: 178 VQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHE 237
Query: 181 ASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEM 240
++CNA+++ Y G +S+A RVF +G G +D ISWN+MI + + A LF +M
Sbjct: 238 ITICNAMISSYADCGSVSDAKRVFDGLG-GSKDLISWNSMIAGFSKHELKESAFELFIQM 296
Query: 241 VRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPR 300
R ++ D++T +L+A + E G HG +IK G + LI MY +
Sbjct: 297 QRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTG 356
Query: 301 GMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVT 360
M D + +FE + DL+ WN++I+GF+Q + LSEDA+ F ++ + + DD +FS +
Sbjct: 357 TMEDALSLFESLKSKDLISWNSIITGFAQ-KGLSEDAVKFFSYLRSSEIKVDDYAFSALL 415
Query: 361 SACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP-EHN 419
+CS+L++ LG+Q+HALA KS SN V ++L+ MYSKCG + AR+ F + +H+
Sbjct: 416 RSCSDLATLQLGQQIHALATKSGFVSNEF-VISSLIVMYSKCGIIESARKCFQQISSKHS 474
Query: 420 TVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFN 479
TV+ N+MI GYAQHG+ SL LF M +++ +++TF ++L+AC+HTG ++EG + N
Sbjct: 475 TVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLN 534
Query: 480 MMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNV 539
+M+ + I+P +H++ VDLLGRAG + +A+ +IE+MP +P + LG CR G +
Sbjct: 535 LMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEI 594
Query: 540 ELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQI 599
E+A + AN L++EP + YV LS+MY+ +WEE A+VK++M+ERGVKK PG SWI+I
Sbjct: 595 EMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEI 654
Query: 600 DNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMK 631
N+V F AED S+P+ ++I+ + ++ ++M+
Sbjct: 655 RNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 235/465 (50%), Gaps = 17/465 (3%)
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
+++ N I+D+ +K L A LFDE+P+ D VS+NT+I+ + G+ A LF +
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 141 EAGLCLDGFTLSGVIKAC----REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGL 196
+G +DG++ S ++K R D+G Q+H + GY C V ++++ Y
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFDLG--EQVHGLVIKGGYECNVYVGSSLVDMYAKCER 151
Query: 197 LSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEM-VRMGMKIDMFTMASV 255
+ +A+ F E+ E + +SWNA+I Q R+ K A L G M ++ + +D T A +
Sbjct: 152 VEDAFEAFKEISE--PNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPL 209
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEI-SE 314
LT Q H +++K G + + +I Y+ C D +VF+ +
Sbjct: 210 LTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVS--DAKRVFDGLGGS 267
Query: 315 PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQ 374
DL+ WN+MI+GFS+HE L E A F MQR D +++ + SACS GK
Sbjct: 268 KDLISWNSMIAGFSKHE-LKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKS 326
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSK--CGNLHDARRVFDTMPEHNTVSLNSMITGYAQ 432
+H + IK + S NAL++MY + G + DA +F+++ + +S NS+ITG+AQ
Sbjct: 327 LHGMVIKKGLE-QVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQ 385
Query: 433 HGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAK 492
G+ ++++ F + +I ++ F ++L +C+ ++ GQ+ + + K G
Sbjct: 386 KGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQ-IHALATKSGFVSNEF 444
Query: 493 HFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHG 537
S ++ + + G +E A + + + ++ W A++ +HG
Sbjct: 445 VISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHG 489
Score = 176 bits (445), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 200/380 (52%), Gaps = 12/380 (3%)
Query: 169 HCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCR 228
HC+A+ CG V N +L Y G L A +F EM + RD +SWN MI C
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPK--RDSVSWNTMISGYTSCG 80
Query: 229 EGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGS 288
+ ++A LF M R G +D ++ + +L ++ G Q HG +IK G+ N +VGS
Sbjct: 81 KLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGS 140
Query: 289 GLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAG 348
L+DMY+KC + D + F+EISEP+ V WN +I+GF Q D+ + +A
Sbjct: 141 SLVDMYAKC--ERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAA 198
Query: 349 FRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDA 408
D +F+ + + + +L KQVHA +K + + +++ NA+++ Y+ CG++ DA
Sbjct: 199 VTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGL-QHEITICNAMISSYADCGSVSDA 257
Query: 409 RRVFDTM-PEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNI-TFISVLSACA 466
+RVFD + + +S NSMI G+++H ++ + +LF + MQ V +I T+ +LSAC+
Sbjct: 258 KRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELF-IQMQRHWVETDIYTYTGLLSACS 316
Query: 467 HTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGR--AGKLEEAERIIETMPFDPGSI 524
G+ M+ +K G+E + ++ + + G +E+A + E++ I
Sbjct: 317 GEEHQIFGKSLHGMVIKK-GLEQVTSATNALISMYIQFPTGTMEDALSLFESLK-SKDLI 374
Query: 525 EWAALLGACRKHGNVELAVK 544
W +++ + G E AVK
Sbjct: 375 SWNSIITGFAQKGLSEDAVK 394
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 227/720 (31%), Positives = 371/720 (51%), Gaps = 50/720 (6%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T LL+ C ++ + G+ +H ++ + + + N ++YS+ G L+ +R F
Sbjct: 91 TMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSM 150
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIP----RPDIVSYNTLIAAHAHRGEHGPAV 133
+ N+ S+N+I+ + K ++ A L DE+ +PDIV++N+L++ +A +G A+
Sbjct: 151 KDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAI 210
Query: 134 RLFKEAREAGLCLDGFTLSGVIKACRE----DVGLVMQLHCFAVLCGYSCYASVCNAVLA 189
+ K + AGL ++S +++A E +G + + Y Y V ++
Sbjct: 211 AVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVY--VETTLID 268
Query: 190 RYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDM 249
Y G L A VF M ++ ++WN+++ K+A L M + G+K D
Sbjct: 269 MYIKTGYLPYARMVFDMMD--AKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDA 326
Query: 250 FTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVF 309
T S+ + + L + G+M + G
Sbjct: 327 ITWNSLASGYATLGKPEKALDVIGKMKEKGV----------------------------- 357
Query: 310 EEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSP 369
P++V W + SG S++ + +AL F MQ G P+ + S + LS
Sbjct: 358 ----APNVVSWTAIFSGCSKNGNF-RNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLL 412
Query: 370 SLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITG 429
GK+VH ++ ++ + V ALV MY K G+L A +F + + S N M+ G
Sbjct: 413 HSGKEVHGFCLRKNLICD-AYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMG 471
Query: 430 YAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEP 489
YA G E + F +M++ + P+ ITF SVLS C ++G V+EG KYF++M+ ++GI P
Sbjct: 472 YAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIP 531
Query: 490 EAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKF 549
+H SCMVDLLGR+G L+EA I+TM P + W A L +C+ H ++ELA A +
Sbjct: 532 TIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRL 591
Query: 550 LQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAE 609
LEPHN+ Y+M+ N+Y++ RWE+ ++ LMR V+ + SWIQID VH+F AE
Sbjct: 592 QVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAE 651
Query: 610 DSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAF 669
+HP +I+ + +++ +MK++GYVPD +D++ EKE+ L+ H+EKLA+ +
Sbjct: 652 GKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCI---HQDISDSEKEKLLMGHTEKLAMTY 708
Query: 670 GLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
GLI K PI VVKN IC D H K +S + REI +++ R H F++G CSC D W
Sbjct: 709 GLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 182/410 (44%), Gaps = 73/410 (17%)
Query: 183 VCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVR 242
V +A + YG L A ++F EM + RD+++WN +++ + ++A+ LF EM
Sbjct: 25 VVSASMGFYGRCVSLGFANKLFDEMPK--RDDLAWNEIVMVNLRSGNWEKAVELFREMQF 82
Query: 243 MGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCA---- 298
G K TM +L + E A G Q HG +++ G N + + LI MYS+
Sbjct: 83 SGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLEL 142
Query: 299 PRGMLDCMK-------------------------VFEEIS----EPDLVLWNTMISGFSQ 329
R + + MK + +E+ +PD+V WN+++SG++
Sbjct: 143 SRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYAS 202
Query: 330 HEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRV 389
+ LS+DA+ + MQ AG +P S S + A + LGK +H +++ + + V
Sbjct: 203 -KGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYD-V 260
Query: 390 SVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQE 449
V L+ MY K G L AR VFD M N V+ NS+++G + + ++ L M +E
Sbjct: 261 YVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKE 320
Query: 450 DIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEE 509
I P+ IT+ S+ S A GK E+ MKEK G+ P
Sbjct: 321 GIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK-GVAPNV------------------ 361
Query: 510 AERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVP 559
+ W A+ C K+GN A+K F++++ P
Sbjct: 362 --------------VSWTAIFSGCSKNGNFRNALKV---FIKMQEEGVGP 394
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 122/255 (47%), Gaps = 10/255 (3%)
Query: 371 LGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGY 430
LG +H IK + ++ V +A + Y +C +L A ++FD MP+ + ++ N ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 431 AQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPE 490
+ G ++++LF M + T + +L C++ EG++ + + G+E
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVL-RLGLESN 123
Query: 491 AKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAAN--K 548
+ ++ + R GKLE + ++ +M D W ++L + K G V+ A+ + +
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMK-DRNLSSWNSILSSYTKLGYVDDAIGLLDEME 182
Query: 549 FLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVA 608
L+P + V + L + YAS G +++ V + M+ G+ KP S I + + VA
Sbjct: 183 ICGLKP-DIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGL--KPSTSSI---SSLLQAVA 236
Query: 609 EDSSHPMIKEIHEYM 623
E + K IH Y+
Sbjct: 237 EPGHLKLGKAIHGYI 251
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/626 (34%), Positives = 345/626 (55%), Gaps = 16/626 (2%)
Query: 101 ARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACRE 160
A +F ++P D++S+N+L+A+ + G A+ L +G ++ T + + AC
Sbjct: 298 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 357
Query: 161 ----DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEIS 216
+ G + LH V+ G + NA+++ YG G +SE+ RV +M RD ++
Sbjct: 358 PDFFEKGRI--LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPR--RDVVA 413
Query: 217 WNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDL-AGGMQFHGRM 275
WNA+I + + +AL F M G+ + T+ SVL+A DL G H +
Sbjct: 414 WNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYI 473
Query: 276 IKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSE 335
+ +GF + HV + LI MY+KC + +F + +++ WN M++ + H E
Sbjct: 474 VSAGFESDEHVKNSLITMYAKCGD--LSSSQDLFNGLDNRNIITWNAMLAA-NAHHGHGE 530
Query: 336 DALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNAL 395
+ L M+ G D SFS SA + L+ G+Q+H LA+K + + NA
Sbjct: 531 EVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSF-IFNAA 589
Query: 396 VAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNN 455
MYSKCG + + ++ + S N +I+ +HG E F M++ I P +
Sbjct: 590 ADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGH 649
Query: 456 ITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIE 515
+TF+S+L+AC+H G V++G Y++M+ FG+EP +H C++DLLGR+G+L EAE I
Sbjct: 650 VTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFIS 709
Query: 516 TMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEE 575
MP P + W +LL +C+ HGN++ KAA +LEP + YV+ SNM+A+ GRWE+
Sbjct: 710 KMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWED 769
Query: 576 SATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGY 635
V++ M + +KKK CSW+++ +KV F D +HP EI+ + ++ + +K++GY
Sbjct: 770 VENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGY 829
Query: 636 VPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLRICGDCHNA 695
V D AL +D E+KE L HSE+LA+A+ L+ST EG + + KNLRIC DCH+
Sbjct: 830 VADTSQAL---QDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSV 886
Query: 696 IKLISAISGREITVRDAHRFHCFKEG 721
K +S + GR I +RD +RFH F+ G
Sbjct: 887 YKFVSRVIGRRIVLRDQYRFHHFERG 912
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/470 (26%), Positives = 238/470 (50%), Gaps = 9/470 (1%)
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
+V+ AI+ + + +R++F+E+P ++VS+ +L+ ++ +GE + ++K R
Sbjct: 76 DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMR 135
Query: 141 EAGLCLDGFTLSGVIKAC--REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLS 198
G+ + ++S VI +C +D L Q+ V G +V N++++ G G +
Sbjct: 136 GEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVD 195
Query: 199 EAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTA 258
A +F +M E RD ISWN++ A Q +E+ +F M R +++ T++++L+
Sbjct: 196 YANYIFDQMSE--RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSV 253
Query: 259 FTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLV 318
++ G HG ++K GF+ V + L+ MY+ ++ VF+++ DL+
Sbjct: 254 LGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRS--VEANLVFKQMPTKDLI 311
Query: 319 LWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHAL 378
WN++++ F ++ S DAL M +G + +F+ +AC G+ +H L
Sbjct: 312 SWNSLMASFV-NDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGL 370
Query: 379 AIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGE 438
+ S + N++ + NALV+MY K G + ++RRV MP + V+ N++I GYA+ +
Sbjct: 371 VVVSGLFYNQI-IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDK 429
Query: 439 SLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMV 498
+L F+ M E + N IT +SVLSAC G + E K + G E + + ++
Sbjct: 430 ALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLI 489
Query: 499 DLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANK 548
+ + G L ++ + + + I W A+L A HG+ E +K +K
Sbjct: 490 TMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGEEVLKLVSK 538
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 214/442 (48%), Gaps = 13/442 (2%)
Query: 108 IPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLV-- 165
+P + VS+NT+++ G + + F++ + G+ F ++ ++ AC +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 166 -MQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVAC 224
+Q+H F G V A+L YG GL+S + +VF EM + R+ +SW +++V
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPD--RNVVSWTSLMVGY 118
Query: 225 GQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNP 284
E +E + ++ M G+ + +M+ V+++ L+D + G Q G+++KSG
Sbjct: 119 SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKL 178
Query: 285 HVGSGLIDMYSKCAPRGMLDCMK-VFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQD 343
V + LI M G +D +F+++SE D + WN++ + ++Q+ + E++ F
Sbjct: 179 AVENSLISM---LGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHI-EESFRIFSL 234
Query: 344 MQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCG 403
M+R + + S + S ++ G+ +H L +K S V V N L+ MY+ G
Sbjct: 235 MRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS-VVCVCNTLLRMYAGAG 293
Query: 404 NLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLS 463
+A VF MP + +S NS++ + G ++L L M+ N +TF S L+
Sbjct: 294 RSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALA 353
Query: 464 ACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGS 523
AC E+G+ ++ G+ + +V + G+ G++ E+ R++ MP
Sbjct: 354 ACFTPDFFEKGRILHGLVVVS-GLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDV 411
Query: 524 IEWAALLGACRKHGNVELAVKA 545
+ W AL+G + + + A+ A
Sbjct: 412 VAWNALIGGYAEDEDPDKALAA 433
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/506 (22%), Positives = 205/506 (40%), Gaps = 77/506 (15%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TFT+ L C + G+ LH L + + + ++ + N +Y K G + +R
Sbjct: 347 TFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR------ 400
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+ ++PR D+V++N LI +A + A+ F+
Sbjct: 401 -------------------------RVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQ 435
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQ---LHCFAVLCGYSCYASVCNAVLARYGGR 194
R G+ + T+ V+ AC L+ + LH + V G+ V N+++ Y
Sbjct: 436 TMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKC 495
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
G LS + +F+ G R+ I+WNAM+ A G+E L L +M G+ +D F+ +
Sbjct: 496 GDLSSSQDLFN--GLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSE 553
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISE 314
L+A L L G Q HG +K GF + + + DMYSKC G + +K+
Sbjct: 554 GLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG--EVVKMLPPSVN 611
Query: 315 PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQ 374
L WN +IS +H E+ F +M G +P +F + +ACS+ G
Sbjct: 612 RSLPSWNILISALGRHGYF-EEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLA 670
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHG 434
+ + + + ++ + + G L +A MP
Sbjct: 671 YYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMP------------------ 712
Query: 435 VEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHF 494
+ PN++ + S+L++C G ++ G+K + + +EPE
Sbjct: 713 ----------------MKPNDLVWRSLLASCKIHGNLDRGRKAAENLSK---LEPEDDSV 753
Query: 495 SCM-VDLLGRAGKLEEAERIIETMPF 519
+ ++ G+ E+ E + + M F
Sbjct: 754 YVLSSNMFATTGRWEDVENVRKQMGF 779
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/546 (39%), Positives = 314/546 (57%), Gaps = 42/546 (7%)
Query: 218 NAMIVACGQCREGKEALVLFGEMVRMG--MKIDMFTMASVLTAFTCLEDLAGGMQFHGRM 275
N+MI A + +++ + ++ G +K D +T+ ++ A T L G+Q HG
Sbjct: 75 NSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMT 134
Query: 276 IKSGFNWNPHVGSGLIDMYSKCAPRGMLD-CMKVFEEISEPDLV---------------- 318
I+ GF+ +PHV +GLI +Y A G LD C KVF I PD V
Sbjct: 135 IRRGFDNDPHVQTGLISLY---AELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVV 191
Query: 319 ---------------LWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSAC 363
WN MISG++Q + S +AL F MQ G + + + V SAC
Sbjct: 192 FARKLFEGMPERDPIAWNAMISGYAQVGE-SREALNVFHLMQLEGVKVNGVAMISVLSAC 250
Query: 364 SNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSL 423
+ L + G+ H+ ++ I V + LV +Y+KCG++ A VF M E N +
Sbjct: 251 TQLGALDQGRWAHSYIERNKIKIT-VRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTW 309
Query: 424 NSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKE 483
+S + G A +G + L+LF LM Q+ + PN +TF+SVL C+ G V+EGQ++F+ M+
Sbjct: 310 SSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRN 369
Query: 484 KFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAV 543
+FGIEP+ +H+ C+VDL RAG+LE+A II+ MP P + W++LL A R + N+EL V
Sbjct: 370 EFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGV 429
Query: 544 KAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKV 603
A+ K L+LE N YV+LSN+YA + W+ + V++ M+ +GV+K+PGCS ++++ +V
Sbjct: 430 LASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEV 489
Query: 604 HVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSE 663
H F D SHP +I ++ R+++ AGY D + D+ EEKE L HSE
Sbjct: 490 HEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMF---DIDEEEKEDALCLHSE 546
Query: 664 KLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHC 723
K A+AFG++S KE VPI +VKNLR+CGDCH +IS I REI VRD +RFH FK+GHC
Sbjct: 547 KAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHC 606
Query: 724 SCKDYW 729
SC +W
Sbjct: 607 SCNGFW 612
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 149/323 (46%), Gaps = 14/323 (4%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T L++ C R TG +H + I+ + ++ LY++ G LD+ F
Sbjct: 110 TVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSI 169
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
P+ A++ AC + + AR+LF+ +P D +++N +I+ +A GE A+ +F
Sbjct: 170 PCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFH 229
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQ---LHCFAVLCGYSCYASVCNAVLARYGGR 194
+ G+ ++G + V+ AC + +G + Q H + + ++ Y
Sbjct: 230 LMQLEGVKVNGVAMISVLSACTQ-LGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKC 288
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
G + +A VF M E ++ +W++ + G++ L LF M + G+ + T S
Sbjct: 289 GDMEKAMEVFWGMEE--KNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVS 346
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNP---HVGSGLIDMYSKCAPRGMLDCMKVFEE 311
VL + + + G Q H +++ F P H G L+D+Y++ + D + + ++
Sbjct: 347 VLRGCSVVGFVDEG-QRHFDSMRNEFGIEPQLEHYGC-LVDLYARAGR--LEDAVSIIQQ 402
Query: 312 IS-EPDLVLWNTMISGFSQHEDL 333
+ +P +W++++ +++L
Sbjct: 403 MPMKPHAAVWSSLLHASRMYKNL 425
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 91/207 (43%), Gaps = 15/207 (7%)
Query: 392 NNALVAMYSKCGNLHD------ARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFEL 445
++ LV + K L D A ++ D + +LNSMI + + V +S +
Sbjct: 37 DDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRR 96
Query: 446 MMQ--EDIVPNNITFISVLSACAHTGKVEEGQKYFNM-MKEKFGIEPEAKHFSCMVDLLG 502
++ D+ P+N T ++ AC E G + M ++ F +P + + ++ L
Sbjct: 97 ILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQ--TGLISLYA 154
Query: 503 RAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVM 562
G L+ ++ ++P P + A++ AC + G+V A K + +P + +
Sbjct: 155 ELGCLDSCHKVFNSIPC-PDFVCRTAMVTACARCGDVVFARKLFEGMPERDP---IAWNA 210
Query: 563 LSNMYASAGRWEESATVKRLMRERGVK 589
+ + YA G E+ V LM+ GVK
Sbjct: 211 MISGYAQVGESREALNVFHLMQLEGVK 237
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 228/592 (38%), Positives = 331/592 (55%), Gaps = 36/592 (6%)
Query: 161 DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSE-------AWRVFHEMGEGCRD 213
D+ + QLH F + Y A L YG LS A+RVF +
Sbjct: 60 DMSQLKQLHAFTLRTTYPEEP----ATLFLYGKILQLSSSFSDVNYAFRVFDSIEN--HS 113
Query: 214 EISWNAMIVACGQ-CREGKEALVLFGEMVRMG-MKIDMFTMASVLTAFTCLEDLAGGMQF 271
WN +I AC +EA +L+ +M+ G D T VL A + + G Q
Sbjct: 114 SFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQV 173
Query: 272 HGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD-CMKVFEEISEPDLVLWNTMISGFSQH 330
H +++K GF + +V +GLI +Y C G LD KVF+E+ E LV WN+MI +
Sbjct: 174 HCQIVKHGFGGDVYVNNGLIHLYGSC---GCLDLARKVFDEMPERSLVSWNSMIDALVRF 230
Query: 331 EDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKS---DIPSN 387
+ + AL F++MQR+ F PD + V SAC+ L S SLG HA ++ D+ +
Sbjct: 231 GEY-DSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD 288
Query: 388 RVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMM 447
V V N+L+ MY KCG+L A +VF M + + S N+MI G+A HG E++ F+ M+
Sbjct: 289 -VLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMV 347
Query: 448 --QEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAG 505
+E++ PN++TF+ +L AC H G V +G++YF+MM + IEP +H+ C+VDL+ RAG
Sbjct: 348 DKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAG 407
Query: 506 KLEEAERIIETMPFDPGSIEWAALLGACRKHG-NVELAVKAANKFLQLEPHN-------A 557
+ EA ++ +MP P ++ W +LL AC K G +VEL+ + A + + N +
Sbjct: 408 YITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCS 467
Query: 558 VPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIK 617
YV+LS +YASA RW + V++LM E G++K+PGCS I+I+ H F A D+SHP K
Sbjct: 468 GAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTK 527
Query: 618 EIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEG 677
+I++ + + +++ GY+PD A D KE L HSE+LA+AFGLI+
Sbjct: 528 QIYQQLKVIDDRLRSIGYLPDRSQAPLVDA-TNDGSKEYSLRLHSERLAIAFGLINLPPQ 586
Query: 678 VPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
PI + KNLR+C DCH KLIS + EI VRD RFH FK+G CSC DYW
Sbjct: 587 TPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 162/345 (46%), Gaps = 15/345 (4%)
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHR-GEHGPAVRLFKEA 139
+F Y I+ S ++ A +FD I +NTLI A AH A L+++
Sbjct: 82 TLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKM 141
Query: 140 REAG-LCLDGFTLSGVIKACREDVGLV--MQLHCFAVLCGYSCYASVCNAVLARYGGRGL 196
E G D T V+KAC G Q+HC V G+ V N ++ YG G
Sbjct: 142 LERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGC 201
Query: 197 LSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVL 256
L A +VF EM E R +SWN+MI A + E AL LF EM R + D +TM SVL
Sbjct: 202 LDLARKVFDEMPE--RSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVL 258
Query: 257 TAFTCLEDLAGGMQFHGRMIKS---GFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEIS 313
+A L L+ G H +++ + V + LI+MY KC M + +VF+ +
Sbjct: 259 SACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAE--QVFQGMQ 316
Query: 314 EPDLVLWNTMISGFSQHEDLSEDALICFQDM--QRAGFRPDDCSFSCVTSACSNLSSPSL 371
+ DL WN MI GF+ H +E+A+ F M +R RP+ +F + AC++ +
Sbjct: 317 KRDLASWNAMILGFATH-GRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNK 375
Query: 372 GKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP 416
G+Q + ++ + +V + ++ G + +A + +MP
Sbjct: 376 GRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMP 420
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 134/317 (42%), Gaps = 43/317 (13%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF +LK C S GK +H +K Y++N LY CG LD AR F
Sbjct: 153 TFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEM 212
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPR---PDIVSYNTLIAAHAHRGEHGPAVR 134
++ S+N++IDA V+ A +LF E+ R PD + ++++A A G
Sbjct: 213 PERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLG------- 265
Query: 135 LFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGR 194
L L + + +++ C DV + VL V N+++ Y
Sbjct: 266 --------SLSLGTWAHAFLLRKCDVDVAM-------DVL--------VKNSLIEMYCKC 302
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMV--RMGMKIDMFTM 252
G L A +VF M + RD SWNAMI+ +EA+ F MV R ++ + T
Sbjct: 303 GSLRMAEQVFQGMQK--RDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTF 360
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNP---HVGSGLIDMYSKCAPRGMLDCMKVF 309
+L A + G Q+ M++ + P H G ++D+ ++ M V
Sbjct: 361 VGLLIACNHRGFVNKGRQYFDMMVRD-YCIEPALEHYGC-IVDLIARAGYITEAIDM-VM 417
Query: 310 EEISEPDLVLWNTMISG 326
+PD V+W +++
Sbjct: 418 SMPMKPDAVIWRSLLDA 434
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/522 (38%), Positives = 308/522 (59%), Gaps = 14/522 (2%)
Query: 213 DEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFH 272
D+ +N++I + + R + + M+ + +T SV+ + L L G H
Sbjct: 71 DDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVH 130
Query: 273 GRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHED 332
+ SGF + +V + L+ YSKC M +VF+ + E +V WN+++SGF Q+
Sbjct: 131 CHAVVSGFGLDTYVQAALVTFYSKCGD--MEGARQVFDRMPEKSIVAWNSLVSGFEQN-G 187
Query: 333 LSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVN 392
L+++A+ F M+ +GF PD +F + SAC+ + SLG VH I + N V +
Sbjct: 188 LADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLN-VKLG 246
Query: 393 NALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDI- 451
AL+ +YS+CG++ AR VFD M E N + +MI+ Y HG ++++LF M++D
Sbjct: 247 TALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFN-KMEDDCG 305
Query: 452 -VPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEA 510
+PNN+TF++VLSACAH G VEEG+ + M + + + P +H CMVD+LGRAG L+EA
Sbjct: 306 PIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEA 365
Query: 511 ERIIETMPFDPGSIE---WAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMY 567
+ I + + W A+LGAC+ H N +L V+ A + + LEP N +VMLSN+Y
Sbjct: 366 YKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIY 425
Query: 568 ASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEML 627
A +G+ +E + ++ M ++K+ G S I+++NK ++F D SH EI+ Y+ ++
Sbjct: 426 ALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLI 485
Query: 628 RKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLR 687
+ K+ GY P + + E+ EEKE L YHSEKLAVAFGL+ T + V I +VKNLR
Sbjct: 486 SRCKEIGYAPVSEEVMHQVEE---EEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLR 541
Query: 688 ICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
IC DCH+A K IS +S R+ITVRD RFH F+ G CSC DYW
Sbjct: 542 ICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 136/327 (41%), Gaps = 51/327 (15%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TFT+++K C + GK +H + + TY+ YSKCG ++ AR
Sbjct: 109 TFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGAR------ 162
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
++FD +P IV++N+L++ G A+++F
Sbjct: 163 -------------------------QVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFY 197
Query: 138 EAREAGLCLDGFTLSGVIKACRED--VGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
+ RE+G D T ++ AC + V L +H + + G + A++ Y G
Sbjct: 198 QMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCG 257
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMV-RMGMKIDMFTMAS 254
+ +A VF +M E + +W AMI A G G++A+ LF +M G + T +
Sbjct: 258 DVGKAREVFDKMKE--TNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVA 315
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSG--LIDMYSKCAPRGMLDCMKVFEEI 312
VL+A + G + RM KS + P V ++DM + G LD + ++ I
Sbjct: 316 VLSACAHAGLVEEGRSVYKRMTKS-YRLIPGVEHHVCMVDMLGRA---GFLD--EAYKFI 369
Query: 313 SEPDLV-------LWNTMISGFSQHED 332
+ D LW M+ H +
Sbjct: 370 HQLDATGKATAPALWTAMLGACKMHRN 396
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/553 (37%), Positives = 320/553 (57%), Gaps = 42/553 (7%)
Query: 212 RDEISWNAMIVACGQCREGK--EALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGM 269
R+ W A+I G EGK EA+ ++G M + + FT +++L A ++DL G
Sbjct: 112 RNPFLWTAVIR--GYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGR 169
Query: 270 QFHGRMIK-SGFNWNPHVGSGLIDMYSKC----------------------------APR 300
QFH + + GF + +VG+ +IDMY KC A
Sbjct: 170 QFHAQTFRLRGFCF-VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARV 228
Query: 301 GMLDCM-KVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCV 359
G ++C ++FE + D+V W M++GF+Q+ ++AL F M+++G R D+ + +
Sbjct: 229 GNMECAAELFESLPTKDMVAWTAMVTGFAQNAK-PQEALEYFDRMEKSGIRADEVTVAGY 287
Query: 360 TSACSNLSSPSLGKQVHALAIKSDI-PSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH 418
SAC+ L + + +A KS PS+ V + +AL+ MYSKCGN+ +A VF +M
Sbjct: 288 ISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNK 347
Query: 419 NTVSLNSMITGYAQHGVEGESLQLFELMM-QEDIVPNNITFISVLSACAHTGKVEEGQKY 477
N + +SMI G A HG E+L LF M+ Q +I PN +TF+ L AC+H+G V++G++
Sbjct: 348 NVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQV 407
Query: 478 FNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHG 537
F+ M + FG++P H++CMVDLLGR G+L+EA +I+TM +P W ALLGACR H
Sbjct: 408 FDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHN 467
Query: 538 NVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWI 597
N E+A AA +LEP Y++LSN+YASAG W V++L++E+G+KK P SW+
Sbjct: 468 NPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWV 527
Query: 598 QIDN-KVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKER 656
N ++H F + +HPM +I + + E++ ++ GY PD+ DV+ K
Sbjct: 528 VDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLS---SVPYDVSDNAKRL 584
Query: 657 RLLYHSEKLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFH 716
L+ H+EKLA+AF L++T I ++KNLR+C DCH ++L S ++G+ I +RD RFH
Sbjct: 585 ILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFH 644
Query: 717 CFKEGHCSCKDYW 729
F+ G CSC D+W
Sbjct: 645 HFRSGDCSCGDFW 657
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 182/427 (42%), Gaps = 55/427 (12%)
Query: 101 ARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKAC-- 158
AR + + + + + +I +A G+ A+ ++ R+ + FT S ++KAC
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 159 REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGE--------- 209
+D+ L Q H C+ V N ++ Y + A +VF EM E
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 210 --------------------GCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDM 249
+D ++W AM+ Q + +EAL F M + G++ D
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 250 FTMASVLTAFTCLEDLAGGMQFHGRMI----KSGFNWNPHV--GSGLIDMYSKCAPRGML 303
T+A ++A L G ++ R + KSG++ + HV GS LIDMYSKC +
Sbjct: 282 VTVAGYISACAQL----GASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCG--NVE 335
Query: 304 DCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDM-QRAGFRPDDCSFSCVTSA 362
+ + VF ++ ++ +++MI G + H +++AL F M + +P+ +F A
Sbjct: 336 EAVNVFMSMNNKNVFTYSSMILGLATH-GRAQEALHLFHYMVTQTEIKPNTVTFVGALMA 394
Query: 363 CSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP-EHNTV 421
CS+ G+QV ++ +V + + G L +A + TM E +
Sbjct: 395 CSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGG 454
Query: 422 SLNSMITGYAQHG----VEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKY 477
+++ H E + LFEL + DI+ N I +V ++ G V +K
Sbjct: 455 VWGALLGACRIHNNPEIAEIAAEHLFEL--EPDIIGNYILLSNVYASAGDWGGVLRVRK- 511
Query: 478 FNMMKEK 484
++KEK
Sbjct: 512 --LIKEK 516
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 117/249 (46%), Gaps = 13/249 (5%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF+ LLK C + +D++ G+ HA + Y+ N +Y KC ++D AR F
Sbjct: 151 TFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEM 210
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+V S+ +I A + ++ A ELF+ +P D+V++ ++ A + A+ F
Sbjct: 211 PERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFD 270
Query: 138 EAREAGLCLDGFTLSGVIKACRE-----DVGLVMQLHCFAVLCGYSC--YASVCNAVLAR 190
++G+ D T++G I AC + +Q+ A GYS + + +A++
Sbjct: 271 RMEKSGIRADEVTVAGYISACAQLGASKYADRAVQI---AQKSGYSPSDHVVIGSALIDM 327
Query: 191 YGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMV-RMGMKIDM 249
Y G + EA VF M ++ ++++MI+ +EAL LF MV + +K +
Sbjct: 328 YSKCGNVEEAVNVFMSMNN--KNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNT 385
Query: 250 FTMASVLTA 258
T L A
Sbjct: 386 VTFVGALMA 394
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 105/231 (45%), Gaps = 15/231 (6%)
Query: 363 CSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHD--ARRVFDTMPEHNT 420
C NL+ KQ+H ++ + + + L+ +K G D ARRV + + N
Sbjct: 59 CINLNQI---KQIHGHVLRKGLDQS-CYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNP 114
Query: 421 VSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNM 480
++I GYA G E++ ++ M +E+I P + TF ++L AC + G+++
Sbjct: 115 FLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFH-- 172
Query: 481 MKEKFGIEPEAKHF--SCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGN 538
+ F + + + M+D+ + ++ A ++ + MP + I W L+ A + GN
Sbjct: 173 -AQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMP-ERDVISWTELIAAYARVGN 230
Query: 539 VELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVK 589
+E AA F L + V + + +A + +E+ M + G++
Sbjct: 231 MEC---AAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIR 278
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/583 (36%), Positives = 333/583 (57%), Gaps = 13/583 (2%)
Query: 150 TLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGE 209
+L +K+C + L LHC V + + + ++ Y G A ++F EM E
Sbjct: 36 SLIAAVKSC-VSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPE 94
Query: 210 GCRDEISWNAMIVA-CGQCREGKEALVLFGEMV-RMGMKIDMFTMASVLTAFTCLEDLAG 267
RD +SWN++I G+ GK VL M+ +G + + T S+++A
Sbjct: 95 --RDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEE 152
Query: 268 GMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGF 327
G HG ++K G V + I+ Y K + K+FE++S +LV WNTMI
Sbjct: 153 GRCIHGLVMKFGVLEEVKVVNAFINWYGKTGD--LTSSCKLFEDLSIKNLVSWNTMIVIH 210
Query: 328 SQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSN 387
Q+ L+E L F +R G PD +F V +C ++ L + +H L + N
Sbjct: 211 LQN-GLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGN 269
Query: 388 RVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMM 447
+ + AL+ +YSK G L D+ VF + ++++ +M+ YA HG ++++ FELM+
Sbjct: 270 KC-ITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMV 328
Query: 448 QEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKL 507
I P+++TF +L+AC+H+G VEEG+ YF M +++ I+P H+SCMVDLLGR+G L
Sbjct: 329 HYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLL 388
Query: 508 EEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMY 567
++A +I+ MP +P S W ALLGACR + + +L KAA + +LEP + YVMLSN+Y
Sbjct: 389 QDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIY 448
Query: 568 ASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEML 627
+++G W++++ ++ LM+++G+ + GCS+I+ NK+H FV D SHP ++I + + E+
Sbjct: 449 SASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIR 508
Query: 628 RKMK-QAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNL 686
+KMK + GY + L DV + KE + HSEK+A+AFGL+ PI++ KNL
Sbjct: 509 KKMKSEMGYKSKTEFVL---HDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNL 565
Query: 687 RICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
RICGDCH K IS I R I +RD+ RFH F +G CSC DYW
Sbjct: 566 RICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 189/419 (45%), Gaps = 35/419 (8%)
Query: 83 FSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEA--R 140
F + ++ ++ H A +LFDE+P D+VS+N+LI+ ++ RG G +
Sbjct: 67 FIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMIS 126
Query: 141 EAGLCLDGFTLSGVIKAC---------REDVGLVMQLHCFAVLCGYSCYASVCNAVLARY 191
E G + T +I AC R GLVM+ F VL V NA + Y
Sbjct: 127 EVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMK---FGVLEE----VKVVNAFINWY 179
Query: 192 GGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFT 251
G G L+ + ++F ++ ++ +SWN MIV Q ++ L F R+G + D T
Sbjct: 180 GKTGDLTSSCKLFEDL--SIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQAT 237
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEE 311
+VL + + + HG ++ GF+ N + + L+D+YSK + D VF E
Sbjct: 238 FLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGR--LEDSSTVFHE 295
Query: 312 ISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSL 371
I+ PD + W M++ ++ H DA+ F+ M G PD +F+ + +ACS+
Sbjct: 296 ITSPDSMAWTAMLAAYATH-GFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEE 354
Query: 372 GKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGY- 430
GK K R+ + +V + + G L DA + MP + + + G
Sbjct: 355 GKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGAC 414
Query: 431 -----AQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEK 484
Q G + +LFEL ++ N + ++ SA +G ++ + N+MK+K
Sbjct: 415 RVYKDTQLGTKAAE-RLFELEPRDG--RNYVMLSNIYSA---SGLWKDASRIRNLMKQK 467
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/597 (35%), Positives = 329/597 (55%), Gaps = 44/597 (7%)
Query: 168 LHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQC 227
LH V G + N ++ YG G S A +VF EM RD I+W +++ A Q
Sbjct: 25 LHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPH--RDHIAWASVLTALNQA 82
Query: 228 R-EGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHV 286
GK V G++ D F ++++ A L + G Q H I S + + V
Sbjct: 83 NLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVV 142
Query: 287 GSGLIDMYSKCAPRGMLDCMK-VFEEISEPDLVLWNTMISGFSQHEDLSE---------- 335
S L+DMY+KC G+L+ K VF+ I + + W M+SG+++ E
Sbjct: 143 KSSLVDMYAKC---GLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPV 199
Query: 336 --------------------DALICFQDMQRAGFRP-DDCSFSCVTSACSNLSSPSLGKQ 374
+A F +M+R D S + AC+NL++ G+Q
Sbjct: 200 KNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQ 259
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHG 434
VH L I S V ++NAL+ MY+KC ++ A+ +F M + VS S+I G AQHG
Sbjct: 260 VHGLVIALGFDSC-VFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHG 318
Query: 435 VEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHF 494
++L L++ M+ + PN +TF+ ++ AC+H G VE+G++ F M + +GI P +H+
Sbjct: 319 QAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHY 378
Query: 495 SCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFL-QLE 553
+C++DLLGR+G L+EAE +I TMPF P WAALL AC++ G ++ ++ A+ + +
Sbjct: 379 TCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFK 438
Query: 554 PHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSH 613
+ Y++LSN+YASA W + + +R + E V+K PG S +++ + VF A ++SH
Sbjct: 439 LKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSH 498
Query: 614 PMIKEIHEYMGEMLRKMK-QAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLI 672
P+ ++I + ++ +M+ + GYVPD W L D+ +EKE+ L +HSE+ AVA+GL+
Sbjct: 499 PLKEDIFRLLKKLEEEMRIRNGYVPDTSWIL---HDMDEQEKEKLLFWHSERSAVAYGLL 555
Query: 673 STKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
G PI +VKNLR+CGDCH +K IS I+ REI VRDA R+H FK G CSC D+W
Sbjct: 556 KAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 125/543 (23%), Positives = 221/543 (40%), Gaps = 109/543 (20%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTN 78
+ + L+ C R ++T K+LHA +K I L+N +Y KCG +
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASH--------- 56
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAV-RLFK 137
A ++FDE+P D +++ +++ A G +
Sbjct: 57 ----------------------ALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSS 94
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLV---MQLHCFAVLCGYSCYASVCNAVLARYGGR 194
+GL D F S ++KAC ++G + Q+HC ++ Y+ V ++++ Y
Sbjct: 95 VGSSSGLRPDDFVFSALVKAC-ANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKC 153
Query: 195 GLLSEAWRVFHEM----------------GEGCRDE-------------ISWNAMIVACG 225
GLL+ A VF + G ++E SW A+I
Sbjct: 154 GLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFV 213
Query: 226 QCREGKEALVLFGEMVRMGMKI-DMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNP 284
Q +G EA +F EM R + I D ++S++ A L G Q HG +I GF+
Sbjct: 214 QSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCV 273
Query: 285 HVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDM 344
+ + LIDMY+KC+ ++ +F + D+V W ++I G +QH +E AL + DM
Sbjct: 274 FISNALIDMYAKCS--DVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQ-AEKALALYDDM 330
Query: 345 QRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGN 404
G +P++ +F + ACS++ G+++ K + L+ + + G
Sbjct: 331 VSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGL 390
Query: 405 LHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSA 464
L +A + TMP P+ T+ ++LSA
Sbjct: 391 LDEAENLIHTMP----------------------------------FPPDEPTWAALLSA 416
Query: 465 CAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRA---GKLEEAERIIETMPF-- 519
C G+ + G + + + F ++ + + + ++ A GK+ EA R + M
Sbjct: 417 CKRQGRGQMGIRIADHLVSSFKLKDPSTYI-LLSNIYASASLWGKVSEARRKLGEMEVRK 475
Query: 520 DPG 522
DPG
Sbjct: 476 DPG 478
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 110/228 (48%), Gaps = 9/228 (3%)
Query: 363 CSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVS 422
C+ + + K +HA +K I + N LV +Y KCG A +VFD MP + ++
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQC-CPLANTLVNVYGKCGAASHALQVFDEMPHRDHIA 71
Query: 423 LNSMITGYAQHGVEGESLQLFELMMQEDIV-PNNITFISVLSACAHTGKVEEG-QKYFNM 480
S++T Q + G++L +F + + P++ F +++ ACA+ G ++ G Q + +
Sbjct: 72 WASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHF 131
Query: 481 MKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVE 540
+ ++ + K S +VD+ + G L A+ + +++ +I W A++ K G E
Sbjct: 132 IVSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSGYAKSGRKE 188
Query: 541 LAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGV 588
A++ F L N + L + + +G+ E+ +V MR V
Sbjct: 189 EALEL---FRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERV 233
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/581 (37%), Positives = 327/581 (56%), Gaps = 11/581 (1%)
Query: 151 LSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEG 210
LS +++A + ++H + G+S S+ +L G + A +VF EM +
Sbjct: 13 LSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKP 72
Query: 211 CRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQ 270
WN + + + E+L+L+ +M +G++ D FT V+ A + L D + G
Sbjct: 73 --RIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFA 130
Query: 271 FHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQH 330
H ++K GF V + L+ MY K + + FE + DLV WN ++ Q
Sbjct: 131 LHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFL--FESMQVKDLVAWNAFLAVCVQT 188
Query: 331 EDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVS 390
+ S AL F M + D + + SAC L S +G++++ A K +I N +
Sbjct: 189 GN-SAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCN-II 246
Query: 391 VNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQED 450
V NA + M+ KCGN AR +F+ M + N VS ++MI GYA +G E+L LF M E
Sbjct: 247 VENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEG 306
Query: 451 IVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKF--GIEPEAKHFSCMVDLLGRAGKLE 508
+ PN +TF+ VLSAC+H G V EG++YF++M + +EP +H++CMVDLLGR+G LE
Sbjct: 307 LRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLE 366
Query: 509 EAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYA 568
EA I+ MP +P + W ALLGAC H ++ L K A+ ++ P +V+LSN+YA
Sbjct: 367 EAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYA 426
Query: 569 SAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLR 628
+AG+W+ V+ MR+ G KK S ++ + K+H F D SHP K I+E + E+L+
Sbjct: 427 AAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILK 486
Query: 629 KMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLRI 688
K+++ GYVPD DV EEKE L +HSEKLA+AFGLI + G PI V+KNLR
Sbjct: 487 KIRKMGYVPDTCSVF---HDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRT 543
Query: 689 CGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
C DCH K +S+++ EI +RD +RFH F+ G CSCK++W
Sbjct: 544 CDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 158/321 (49%), Gaps = 11/321 (3%)
Query: 101 ARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACRE 160
AR++FDE+ +P I +NTL + ++ L+K+ R+ G+ D FT V+KA +
Sbjct: 62 ARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQ 121
Query: 161 --DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWN 218
D LH V G+ C V ++ Y G LS A +F M +D ++WN
Sbjct: 122 LGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESM--QVKDLVAWN 179
Query: 219 AMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKS 278
A + C Q AL F +M ++ D FT+ S+L+A L L G + + R K
Sbjct: 180 AFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKE 239
Query: 279 GFNWNPHVGSGLIDMYSKCAPRGMLDCMKV-FEEISEPDLVLWNTMISGFSQHEDLSEDA 337
+ N V + +DM+ KC G + +V FEE+ + ++V W+TMI G++ + D S +A
Sbjct: 240 EIDCNIIVENARLDMHLKC---GNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGD-SREA 295
Query: 338 LICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPS--NRVSVNNAL 395
L F MQ G RP+ +F V SACS+ + GK+ +L ++S+ + R +
Sbjct: 296 LTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACM 355
Query: 396 VAMYSKCGNLHDARRVFDTMP 416
V + + G L +A MP
Sbjct: 356 VDLLGRSGLLEEAYEFIKKMP 376
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 112/250 (44%), Gaps = 16/250 (6%)
Query: 93 VKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLS 152
+K L A LF+ + D+V++N +A G A+ F + + D FT+
Sbjct: 155 MKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVV 214
Query: 153 GVIKACREDVGLVM--QLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEG 210
++ AC + L + +++ A C V NA L + G A +F EM +
Sbjct: 215 SMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQ- 273
Query: 211 CRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQ 270
R+ +SW+ MIV + +EAL LF M G++ + T VL+A + + G +
Sbjct: 274 -RNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKR 332
Query: 271 FHGRMIKSG-FNWNPHVG--SGLIDMYSKCAPRGMLDCMKVFEEIS----EPDLVLWNTM 323
+ M++S N P + ++D+ + G+L+ + +E I EPD +W +
Sbjct: 333 YFSLMVQSNDKNLEPRKEHYACMVDLLGRS---GLLE--EAYEFIKKMPVEPDTGIWGAL 387
Query: 324 ISGFSQHEDL 333
+ + H D+
Sbjct: 388 LGACAVHRDM 397
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 16/159 (10%)
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
N+ NA +D +K + AR LF+E+ + ++VS++T+I +A G+ A+ LF +
Sbjct: 244 NIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQ 303
Query: 141 EAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSC----------YASVCNAVLAR 190
GL + T GV+ AC GLV + + L S YA + + +
Sbjct: 304 NEGLRPNYVTFLGVLSACSH-AGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLL--- 359
Query: 191 YGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCRE 229
G GLL EA+ +M D W A++ AC R+
Sbjct: 360 -GRSGLLEEAYEFIKKMPVE-PDTGIWGALLGACAVHRD 396
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/551 (37%), Positives = 318/551 (57%), Gaps = 12/551 (2%)
Query: 86 NAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLC 145
N +ID+ VK + A +LF+ +P +I+S+ TL++ + H A+ LF + GL
Sbjct: 288 NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLK 347
Query: 146 LDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRV 203
D + S ++ +C +G Q+H + + + V N+++ Y L++A +V
Sbjct: 348 PDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKV 407
Query: 204 FHEMGEGCRDEISWNAMIVA---CGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFT 260
F D + +NAMI G E EAL +F +M ++ + T S+L A
Sbjct: 408 FDIFAAA--DVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASA 465
Query: 261 CLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLW 320
L L Q HG M K G N + GS LID+YS C + D VF+E+ DLV+W
Sbjct: 466 SLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYC--LKDSRLVFDEMKVKDLVIW 523
Query: 321 NTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAI 380
N+M +G+ Q + +E+AL F ++Q + RPD+ +F+ + +A NL+S LG++ H +
Sbjct: 524 NSMFAGYVQQSE-NEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLL 582
Query: 381 KSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESL 440
K + N + NAL+ MY+KCG+ DA + FD+ + V NS+I+ YA HG ++L
Sbjct: 583 KRGLECNPY-ITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKAL 641
Query: 441 QLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDL 500
Q+ E MM E I PN ITF+ VLSAC+H G VE+G K F +M +FGIEPE +H+ CMV L
Sbjct: 642 QMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSL 700
Query: 501 LGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPY 560
LGRAG+L +A +IE MP P +I W +LL C K GNVELA AA + +P ++ +
Sbjct: 701 LGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSF 760
Query: 561 VMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIH 620
MLSN+YAS G W E+ V+ M+ GV K+PG SWI I+ +VH+F+++D SH +I+
Sbjct: 761 TMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIY 820
Query: 621 EYMGEMLRKMK 631
E + ++L +++
Sbjct: 821 EVLDDLLVQIR 831
Score = 205 bits (522), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 152/518 (29%), Positives = 261/518 (50%), Gaps = 16/518 (3%)
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
+ +V+ +ID +K ++ AR +FD +P V++ T+I+ G +++LF +
Sbjct: 180 DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 139 AREAGLCLDGFTLSGVIKACREDVGLV--MQLHCFAVLCGYSCYASVCNAVLARYGGRGL 196
E + DG+ LS V+ AC L Q+H + G AS+ N ++ Y G
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299
Query: 197 LSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVL 256
+ A ++F+ M ++ ISW ++ Q KEA+ LF M + G+K DM+ +S+L
Sbjct: 300 VIAAHKLFNGMPN--KNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSIL 357
Query: 257 TAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPD 316
T+ L L G Q H IK+ + +V + LIDMY+KC + D KVF+ + D
Sbjct: 358 TSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDC--LTDARKVFDIFAAAD 415
Query: 317 LVLWNTMISGFSQHEDLSE--DALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQ 374
+VL+N MI G+S+ E +AL F+DM+ RP +F + A ++L+S L KQ
Sbjct: 416 VVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQ 475
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHG 434
+H L K + + + +AL+ +YS C L D+R VFD M + V NSM GY Q
Sbjct: 476 IHGLMFKYGLNLD-IFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQS 534
Query: 435 VEGESLQLF-ELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKH 493
E+L LF EL + + P+ TF ++++A + V+ GQ+ F+ K G+E
Sbjct: 535 ENEEALNLFLELQLSRE-RPDEFTFANMVTAAGNLASVQLGQE-FHCQLLKRGLECNPYI 592
Query: 494 FSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ-- 551
+ ++D+ + G E+A + ++ + W +++ + HG + A++ K +
Sbjct: 593 TNALLDMYAKCGSPEDAHKAFDSAA-SRDVVCWNSVISSYANHGEGKKALQMLEKMMSEG 651
Query: 552 LEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVK 589
+EP N + +V + + + AG E+ LM G++
Sbjct: 652 IEP-NYITFVGVLSACSHAGLVEDGLKQFELMLRFGIE 688
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 131/511 (25%), Positives = 224/511 (43%), Gaps = 88/511 (17%)
Query: 20 TNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNN 79
+++L C S + G +HA IK + + +Y++N +Y+KC L +AR F +
Sbjct: 354 SSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAA 413
Query: 80 PNVFSYNAIIDACVK-------HSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPA 132
+V +NA+I+ + H L++ R++ + RP ++++ +L+ A A G +
Sbjct: 414 ADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLS 473
Query: 133 VRLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYS-CYASVCNAVLARY 191
++ + GL LD F S +I DV YS CY
Sbjct: 474 KQIHGLMFKYGLNLDIFAGSALI-----DV--------------YSNCYC---------- 504
Query: 192 GGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFT 251
L ++ VF EM +D + WN+M Q E +EAL LF E+ + D FT
Sbjct: 505 -----LKDSRLVFDEM--KVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFT 557
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKC-APRGMLDCMKVFE 310
A+++TA L + G +FH +++K G NP++ + L+DMY+KC +P D K F+
Sbjct: 558 FANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPE---DAHKAFD 614
Query: 311 EISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPS 370
+ D+V WN++IS ++ H + + AL + M G P+ +F V SACS+
Sbjct: 615 SAASRDVVCWNSVISSYANHGE-GKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVE 673
Query: 371 LGKQVHALAIKSDI-PSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITG 429
G + L ++ I P V +V++ + G L+ AR + + MP
Sbjct: 674 DGLKQFELMLRFGIEPETEHYV--CMVSLLGRAGRLNKARELIEKMPTK----------- 720
Query: 430 YAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEP 489
P I + S+LS CA G VE + M
Sbjct: 721 -----------------------PAAIVWRSLLSGCAKAGNVELAEHAAEM--AILSDPK 755
Query: 490 EAKHFSCMVDLLGRAGKLEEAERIIETMPFD 520
++ F+ + ++ G EA+++ E M +
Sbjct: 756 DSGSFTMLSNIYASKGMWTEAKKVRERMKVE 786
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 144/269 (53%), Gaps = 9/269 (3%)
Query: 272 HGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHE 331
HG++I G + ++ + LI++YS+ GM+ KVFE++ E +LV W+TM+S H
Sbjct: 67 HGQIIVWGLELDTYLSNILINLYSRAG--GMVYARKVFEKMPERNLVSWSTMVSA-CNHH 123
Query: 332 DLSEDALICFQDMQRA-GFRPDDCSFSCVTSACSNLSSPS--LGKQVHALAIKSDIPSNR 388
+ E++L+ F + R P++ S ACS L + Q+ + +KS +
Sbjct: 124 GIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRD- 182
Query: 389 VSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQ 448
V V L+ Y K GN+ AR VFD +PE +TV+ +MI+G + G SLQLF +M+
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242
Query: 449 EDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLE 508
+++VP+ +VLSAC+ + EG K + ++G+E +A + ++D + G++
Sbjct: 243 DNVVPDGYILSTVLSACSILPFL-EGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVI 301
Query: 509 EAERIIETMPFDPGSIEWAALLGACRKHG 537
A ++ MP + I W LL +++
Sbjct: 302 AAHKLFNGMP-NKNIISWTTLLSGYKQNA 329
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 175/353 (49%), Gaps = 14/353 (3%)
Query: 168 LHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQC 227
+H ++ G + N ++ Y G + A +VF +M E R+ +SW+ M+ AC
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPE--RNLVSWSTMVSACNHH 123
Query: 228 REGKEALVLFGEMVRMGMKI-DMFTMASVLTAFTCLEDLAGGM--QFHGRMIKSGFNWNP 284
+E+LV+F E R + + ++S + A + L+ M Q ++KSGF+ +
Sbjct: 124 GIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 285 HVGSGLIDMYSKCAPRGMLDCMK-VFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQD 343
+VG+ LID Y K G +D + VF+ + E V W TMISG + S +L F
Sbjct: 184 YVGTLLIDFYLK---DGNIDYARLVFDALPEKSTVTWTTMISGCVKMGR-SYVSLQLFYQ 239
Query: 344 MQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCG 403
+ PD S V SACS L GKQ+HA ++ + + S+ N L+ Y KCG
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMD-ASLMNVLIDSYVKCG 298
Query: 404 NLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLS 463
+ A ++F+ MP N +S ++++GY Q+ + E+++LF M + + P+ S+L+
Sbjct: 299 RVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILT 358
Query: 464 ACAHTGKVEEG-QKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIE 515
+CA + G Q + +K G + + ++D+ + L +A ++ +
Sbjct: 359 SCASLHALGFGTQVHAYTIKANLGNDSYVTN--SLIDMYAKCDCLTDARKVFD 409
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/636 (33%), Positives = 344/636 (54%), Gaps = 43/636 (6%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T + K S + + G+ HAL +K Y+ +Y K G +++
Sbjct: 120 TLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGL------ 173
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVR--- 134
VF+Y +P + +++T+++ +A RG A++
Sbjct: 174 ---KVFAY----------------------MPERNTYTWSTMVSGYATRGRVEEAIKVFN 208
Query: 135 LFKEAREAGLCLDGFTLSGVIKACRED--VGLVMQLHCFAVLCGYSCYASVCNAVLARYG 192
LF +E G D + + V+ + VGL Q+HC + G + ++ NA++ Y
Sbjct: 209 LFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYS 267
Query: 193 GRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTM 252
L+EA ++F G+ R+ I+W+AM+ Q E EA+ LF M G+K +T+
Sbjct: 268 KCESLNEACKMFDSSGD--RNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTI 325
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEI 312
VL A + + L G Q H ++K GF + + L+DMY+K + D K F+ +
Sbjct: 326 VGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGC--LADARKGFDCL 383
Query: 313 SEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLG 372
E D+ LW ++ISG+ Q+ D +E+ALI ++ M+ AG P+D + + V ACS+L++ LG
Sbjct: 384 QERDVALWTSLISGYVQNSD-NEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELG 442
Query: 373 KQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQ 432
KQVH IK V + +AL MYSKCG+L D VF P + VS N+MI+G +
Sbjct: 443 KQVHGHTIKHGF-GLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSH 501
Query: 433 HGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAK 492
+G E+L+LFE M+ E + P+++TF++++SAC+H G VE G YFNMM ++ G++P+
Sbjct: 502 NGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVD 561
Query: 493 HFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQL 552
H++CMVDLL RAG+L+EA+ IE+ D G W LL AC+ HG EL V A K + L
Sbjct: 562 HYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMAL 621
Query: 553 EPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSS 612
+ YV LS +Y + GR + V + MR GV K+ GCSWI++ N+ HVFV D+
Sbjct: 622 GSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTM 681
Query: 613 HPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDED 648
HPMI+E + + + R+M + G+V + + ++E+
Sbjct: 682 HPMIEETKDLVCLVSRQMIEEGFVTVLDSSFVEEEE 717
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 147/552 (26%), Positives = 255/552 (46%), Gaps = 57/552 (10%)
Query: 20 TNLLKQCI---SQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRL 76
+ LLK+ QR++ G+++H I+T +N Y+KCG L A + F
Sbjct: 15 STLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIF-- 72
Query: 77 TNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRG---EHGPAV 133
NAII C D+VS+N+LI ++ G +
Sbjct: 73 ---------NAII--C------------------KDVVSWNSLITGYSQNGGISSSYTVM 103
Query: 134 RLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYAS--VCNAVLARY 191
+LF+E R + + +TL+G+ KA + A++ S + V +++ Y
Sbjct: 104 QLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMY 163
Query: 192 GGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVR---MGMKID 248
GL+ + +VF M E R+ +W+ M+ +EA+ +F +R G D
Sbjct: 164 CKAGLVEDGLKVFAYMPE--RNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD 221
Query: 249 MFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKV 308
+ +VL++ + G Q H IK+G + + L+ MYSKC + + K+
Sbjct: 222 -YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKC--ESLNEACKM 278
Query: 309 FEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSS 368
F+ + + + W+ M++G+SQ+ + S +A+ F M AG +P + + V +ACS++
Sbjct: 279 FDSSGDRNSITWSAMVTGYSQNGE-SLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICY 337
Query: 369 PSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMIT 428
GKQ+H+ +K + + ALV MY+K G L DAR+ FD + E + S+I+
Sbjct: 338 LEEGKQLHSFLLKLGFERHLFA-TTALVDMYAKAGCLADARKGFDCLQERDVALWTSLIS 396
Query: 429 GYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEG-QKYFNMMKEKFGI 487
GY Q+ E+L L+ M I+PN+ T SVL AC+ +E G Q + + +K FG+
Sbjct: 397 GYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGL 456
Query: 488 E-PEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAA 546
E P S M + G LE+ + P + + W A++ +G + A++
Sbjct: 457 EVPIGSALSTMYS---KCGSLEDGNLVFRRTP-NKDVVSWNAMISGLSHNGQGDEALELF 512
Query: 547 NKFLQ--LEPHN 556
+ L +EP +
Sbjct: 513 EEMLAEGMEPDD 524
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/583 (35%), Positives = 326/583 (55%), Gaps = 44/583 (7%)
Query: 185 NAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMG 244
NA+ Y G + A ++F E+ +D + W ++ + + ++ LF EM R
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKR 106
Query: 245 MKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD 304
++ID ++ + LEDL Q HG +K G + V + L+DMY KC + +
Sbjct: 107 VEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGL--VSE 164
Query: 305 CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQR---------------AGF 349
++FEE+ E +V W ++ + E L E F +M AGF
Sbjct: 165 VKRIFEELEEKSVVSWTVVLDTVVKWEGL-ERGREVFHEMPERNAVAWTVMVAGYLGAGF 223
Query: 350 RPD------DCSFSC-----------VTSACSNLSSPSLGKQVHALAIKSDI------PS 386
+ + F C + SAC+ + +G+ VH A+K ++
Sbjct: 224 TREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASY 283
Query: 387 NRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELM 446
+ V V ALV MY+KCGN+ + VF M + N V+ N++ +G A HG + +F M
Sbjct: 284 DDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM 343
Query: 447 MQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGK 506
++E + P+++TF +VLSAC+H+G V+EG + F+ ++ +G+EP+ H++CMVDLLGRAG
Sbjct: 344 IRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLR-FYGLEPKVDHYACMVDLLGRAGL 401
Query: 507 LEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNM 566
+EEAE ++ MP P + +LLG+C HG VE+A + + +Q+ P N +++SNM
Sbjct: 402 IEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNM 461
Query: 567 YASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEM 626
Y + GR + + ++ +R+RG++K PG S I +++ VH F + D SHP KEI+ + E+
Sbjct: 462 YVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEV 521
Query: 627 LRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNL 686
+ +++ AGYVPD+ + E EEKE+ L HSEKLAV FGL+ TK P+LV KNL
Sbjct: 522 IERIRSAGYVPDVSGLVSHSEG-DLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNL 580
Query: 687 RICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
RIC DCH+A+K++S + REI +RD +RFH FK G CSC DYW
Sbjct: 581 RICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 190/459 (41%), Gaps = 84/459 (18%)
Query: 22 LLKQCISQRDISTGKSLHALYIKTFIPHS--TYLSNHFTLLYSKCGTLDNARTSFRLTNN 79
LL+ C + + GK LHA+ + + + +YLSN Y+ G +
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVT---------- 61
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIP--RPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
A++LFDEIP D V + TL+++ + G +++LF
Sbjct: 62 ---------------------AQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFV 100
Query: 138 EAREAGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
E R + +D ++ + C ED+G Q H AV G VCNA++ YG G
Sbjct: 101 EMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCG 160
Query: 196 LLSEAWRVFHEMGEGC-----------------------------RDEISWNAMIVACGQ 226
L+SE R+F E+ E R+ ++W M+
Sbjct: 161 LVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLG 220
Query: 227 CREGKEALVLFGEMV-RMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPH 285
+E L L EMV R G ++ T+ S+L+A +L G H +K
Sbjct: 221 AGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEE 280
Query: 286 -------VGSGLIDMYSKCAPRGMLD-CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDA 337
VG+ L+DMY+KC G +D M VF + + ++V WN + SG + H
Sbjct: 281 ASYDDVMVGTALVDMYAKC---GNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGK-GRMV 336
Query: 338 LICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLG-KQVHALAIKSDIPSNRVSVNNALV 396
+ F M R +PDD +F+ V SACS+ G + H+L P +V +V
Sbjct: 337 IDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEP--KVDHYACMV 393
Query: 397 AMYSKCGNLHDARRVFDTMP-EHNTVSLNSMITGYAQHG 434
+ + G + +A + MP N V L S++ + HG
Sbjct: 394 DLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHG 432
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 106/212 (50%), Gaps = 8/212 (3%)
Query: 363 CSNLSSPSLGKQVHALAIKSDIP-SNRVSVNNALVAMYSKCGNLHDARRVFDTMP--EHN 419
C++ S GK++HA+ S + + R ++NAL Y+ G + A+++FD +P E +
Sbjct: 16 CAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKD 75
Query: 420 TVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFN 479
V ++++ ++++G+ S++LF M ++ + ++++ + + CA + Q+
Sbjct: 76 NVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHG 135
Query: 480 MMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNV 539
+ K G+ K + ++D+ G+ G + E +RI E + + + W +L K +
Sbjct: 136 -VAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELE-EKSVVSWTVVLDTVVKWEGL 193
Query: 540 ELAVKAANKFLQLEPHNAVPYVMLSNMYASAG 571
E + F ++ NAV + ++ Y AG
Sbjct: 194 E---RGREVFHEMPERNAVAWTVMVAGYLGAG 222
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 10/137 (7%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFI---PHSTY----LSNHFTLLYSKCGTLDNA 70
T ++L C ++ G+ +H +K + ++Y + +Y+KCG +D++
Sbjct: 246 TLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSS 305
Query: 71 RTSFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPR---PDIVSYNTLIAAHAHRG 127
FRL NV ++NA+ H + ++F ++ R PD +++ +++A +H G
Sbjct: 306 MNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIREVKPDDLTFTAVLSACSHSG 365
Query: 128 EHGPAVRLFKEAREAGL 144
R F R GL
Sbjct: 366 IVDEGWRCFHSLRFYGL 382
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/518 (38%), Positives = 300/518 (57%), Gaps = 13/518 (2%)
Query: 218 NAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLE--DLAGGMQFHGRM 275
N MI A + E LF + R + ++S C++ DL GG+Q HG++
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSL-RRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKI 139
Query: 276 IKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSE 335
GF + + + L+D+YS C D KVF+EI + D V WN + S + +++ +
Sbjct: 140 FSDGFLSDSLLMTTLMDLYSTC--ENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKR-TR 196
Query: 336 DALICFQDMQR---AGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVN 392
D L+ F M+ +PD + AC+NL + GKQVH I + S ++++
Sbjct: 197 DVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDF-IDENGLSGALNLS 255
Query: 393 NALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIV 452
N LV+MYS+CG++ A +VF M E N VS ++I+G A +G E+++ F M++ I
Sbjct: 256 NTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGIS 315
Query: 453 PNNITFISVLSACAHTGKVEEGQKYFNMMKE-KFGIEPEAKHFSCMVDLLGRAGKLEEAE 511
P T +LSAC+H+G V EG +F+ M+ +F I+P H+ C+VDLLGRA L++A
Sbjct: 316 PEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAY 375
Query: 512 RIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAG 571
+I++M P S W LLGACR HG+VEL + + ++L+ A YV+L N Y++ G
Sbjct: 376 SLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVG 435
Query: 572 RWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMK 631
+WE+ ++ LM+E+ + KPGCS I++ VH F+ +D SHP +EI++ + E+ +++K
Sbjct: 436 KWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLK 495
Query: 632 QAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLRICGD 691
AGYV +I L E + EEK L YHSEKLA+AFG++ T G I V KNLR C D
Sbjct: 496 IAGYVAEITSELHNLE--SEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVD 553
Query: 692 CHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
CHN K +S + R + VRD RFH FK G CSC D+W
Sbjct: 554 CHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 131/288 (45%), Gaps = 9/288 (3%)
Query: 270 QFHGRMIKSGFNWNPHVGSGLIDMYS-KCAPRGMLDCMKVFEEISEPDLVLWNTMISGFS 328
Q H ++++ N V + + PR + +VF + P L NTMI FS
Sbjct: 29 QIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRAFS 88
Query: 329 QHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGK-QVHALAIKSDIPSN 387
+ E F+ ++R P + S C S LG Q+H S+
Sbjct: 89 LSQTPCE-GFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSD 147
Query: 388 RVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMM 447
+ + L+ +YS C N DA +VFD +P+ +TVS N + + Y ++ + L LF+ M
Sbjct: 148 SL-LMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMK 206
Query: 448 QED---IVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRA 504
+ + P+ +T + L ACA+ G ++ G++ + + E G+ + +V + R
Sbjct: 207 NDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDEN-GLSGALNLSNTLVSMYSRC 265
Query: 505 GKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQL 552
G +++A ++ M + + W AL+ +G + A++A N+ L+
Sbjct: 266 GSMDKAYQVFYGMR-ERNVVSWTALISGLAMNGFGKEAIEAFNEMLKF 312
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 139/325 (42%), Gaps = 55/325 (16%)
Query: 23 LKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNV 82
LK CI D+ G +H + L LYS C +N+
Sbjct: 120 LKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTC---ENS------------ 164
Query: 83 FSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR-E 141
DAC ++FDEIP+ D VS+N L + + + LF + + +
Sbjct: 165 ------TDAC----------KVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKND 208
Query: 142 AGLCL--DGFTLSGVIKACRE----DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
C+ DG T ++AC D G Q+H F G S ++ N +++ Y G
Sbjct: 209 VDGCVKPDGVTCLLALQACANLGALDFG--KQVHDFIDENGLSGALNLSNTLVSMYSRCG 266
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
+ +A++VF+ M E R+ +SW A+I GKEA+ F EM++ G+ + T+ +
Sbjct: 267 SMDKAYQVFYGMRE--RNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGL 324
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNP---HVGSGLIDMYSKCAPRGMLDCMKVFEEI 312
L+A + +A GM F RM F P H G ++D+ + +LD K + I
Sbjct: 325 LSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGC-VVDLLGRAR---LLD--KAYSLI 378
Query: 313 S----EPDLVLWNTMISGFSQHEDL 333
+PD +W T++ H D+
Sbjct: 379 KSMEMKPDSTIWRTLLGACRVHGDV 403
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/546 (36%), Positives = 309/546 (56%), Gaps = 33/546 (6%)
Query: 213 DEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFH 272
D WN MI E + +L+L+ M+ + +T S+L A + L Q H
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138
Query: 273 GRMIKSGFNWNPHVGSGLIDMYSKCA----------------------------PRGMLD 304
++ K G+ + + + LI+ Y+ G +D
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 198
Query: 305 -CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSAC 363
+ +F +++E + + W TMISG+ Q D++++AL F +MQ + PD+ S + SAC
Sbjct: 199 IALTLFRKMAEKNAISWTTMISGYVQ-ADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257
Query: 364 SNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSL 423
+ L + GK +H+ K+ I + V + L+ MY+KCG + +A VF + + + +
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSV-LGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAW 316
Query: 424 NSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKE 483
++I+GYA HG E++ F M + I PN ITF +VL+AC++TG VEEG+ F M+
Sbjct: 317 TALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMER 376
Query: 484 KFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAV 543
+ ++P +H+ C+VDLLGRAG L+EA+R I+ MP P ++ W ALL ACR H N+EL
Sbjct: 377 DYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGE 436
Query: 544 KAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKV 603
+ + ++P++ YV +N++A +W+++A +RLM+E+GV K PGCS I ++
Sbjct: 437 EIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTT 496
Query: 604 HVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSE 663
H F+A D SHP I++I M RK+++ GYVP++ L + V +E+E + HSE
Sbjct: 497 HEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLL--DLVDDDEREAIVHQHSE 554
Query: 664 KLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHC 723
KLA+ +GLI TK G I ++KNLR+C DCH KLIS I R+I +RD RFH F++G C
Sbjct: 555 KLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKC 614
Query: 724 SCKDYW 729
SC DYW
Sbjct: 615 SCGDYW 620
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 151/325 (46%), Gaps = 39/325 (12%)
Query: 270 QFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMK-VFEEISEPDLVLWNTMISGFS 328
Q H RM+K+G + + + + L + VF+ PD LWN MI GFS
Sbjct: 32 QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFS 91
Query: 329 QHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHA----------- 377
D E +L+ +Q M + + +F + ACSNLS+ Q+HA
Sbjct: 92 C-SDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDV 150
Query: 378 LAIKSDIPSNRVSVN-------------------NALVAMYSKCGNLHDARRVFDTMPEH 418
A+ S I S V+ N N+++ Y K G + A +F M E
Sbjct: 151 YAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK 210
Query: 419 NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYF 478
N +S +MI+GY Q + E+LQLF M D+ P+N++ + LSACA G +E+G K+
Sbjct: 211 NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQG-KWI 269
Query: 479 NMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIE-WAALLGACRKHG 537
+ K I ++ ++D+ + G++EEA + + + S++ W AL+ HG
Sbjct: 270 HSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK--KKSVQAWTALISGYAYHG 327
Query: 538 NVELAVKAANKFLQLEPHNAVPYVM 562
+ +A +KF++++ P V+
Sbjct: 328 H---GREAISKFMEMQKMGIKPNVI 349
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 150/326 (46%), Gaps = 20/326 (6%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF +LLK C + +HA K + Y N Y+ G A F
Sbjct: 117 TFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRI 176
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
P+ S+N++I VK + +A LF ++ + +S+ T+I+ + + A++LF
Sbjct: 177 PEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFH 236
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQ---LHCFAVLCGYSCYASVCNAVLARYGGR 194
E + + + D +L+ + AC + +G + Q +H + + + ++ Y
Sbjct: 237 EMQNSDVEPDNVSLANALSACAQ-LGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKC 295
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
G + EA VF + + + +W A+I G+EA+ F EM +MG+K ++ T +
Sbjct: 296 GEMEEALEVFKNIKK--KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTA 353
Query: 255 VLTA--FTCLEDLAGGMQFHGRMIKSGFNWNP---HVGSGLIDMYSKCAPRGMLDCMKVF 309
VLTA +T L + G + F+ ++ +N P H G ++D+ + G+LD K F
Sbjct: 354 VLTACSYTGLVE-EGKLIFYS--MERDYNLKPTIEHYGC-IVDLLGRA---GLLDEAKRF 406
Query: 310 --EEISEPDLVLWNTMISGFSQHEDL 333
E +P+ V+W ++ H+++
Sbjct: 407 IQEMPLKPNAVIWGALLKACRIHKNI 432
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 232/717 (32%), Positives = 367/717 (51%), Gaps = 49/717 (6%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T+ ++K + GK +HA+ IK Y+ N LY K G +A
Sbjct: 132 TYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAE------ 185
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
++F+E+P DIVS+N++I+ + G+ ++ LFK
Sbjct: 186 -------------------------KVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFK 220
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVM--QLHCFAVLCGY-SCYASVCNAVLARYGGR 194
E + G D F+ + AC M ++HC AV + V ++L Y
Sbjct: 221 EMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKY 280
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRM-GMKIDMFTMA 253
G +S A R+F+ M + R+ ++WN MI + +A + F +M G++ D+ T
Sbjct: 281 GEVSYAERIFNGMIQ--RNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSI 338
Query: 254 SVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKV-FEEI 312
++L A LE G HG ++ GF + + + LIDMY +C G L +V F+ +
Sbjct: 339 NLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGEC---GQLKSAEVIFDRM 391
Query: 313 SEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLG 372
+E +++ WN++I+ + Q+ + AL FQ++ + PD + + + A + S S G
Sbjct: 392 AEKNVISWNSIIAAYVQNGK-NYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEG 450
Query: 373 KQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQ 432
+++HA +KS SN + + N+LV MY+ CG+L DAR+ F+ + + VS NS+I YA
Sbjct: 451 REIHAYIVKSRYWSNTI-ILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAV 509
Query: 433 HGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAK 492
HG S+ LF M+ + PN TF S+L+AC+ +G V+EG +YF MK ++GI+P +
Sbjct: 510 HGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIE 569
Query: 493 HFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQL 552
H+ CM+DL+GR G A+R +E MPF P + W +LL A R H ++ +A AA + ++
Sbjct: 570 HYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKM 629
Query: 553 EPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSS 612
E N YV+L NMYA AGRWE+ +K LM +G+ + S ++ K HVF D S
Sbjct: 630 EHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRS 689
Query: 613 HPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLI 672
H +I+E + + R + + L + V + R HS +LA FGLI
Sbjct: 690 HVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPR--RHSVRLATCFGLI 747
Query: 673 STKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
ST+ G + V N RIC CH ++ S ++ REI V D+ FH F G CSC +YW
Sbjct: 748 STETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 192/367 (52%), Gaps = 19/367 (5%)
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
L+ +A ++F EM + D WN MI C EA+ + MV G+K D FT V
Sbjct: 79 LMEDALQLFDEMNKA--DAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFV 136
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSK--CAPRGMLDCMKVFEEIS 313
+ + + L G + H +IK GF + +V + LI +Y K CA D KVFEE+
Sbjct: 137 IKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCA----WDAEKVFEEMP 192
Query: 314 EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGK 373
E D+V WN+MISG+ D +L+ F++M + GF+PD S ACS++ SP +GK
Sbjct: 193 ERDIVSWNSMISGYLALGD-GFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGK 251
Query: 374 QVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQH 433
++H A++S I + V V +++ MYSK G + A R+F+ M + N V+ N MI YA++
Sbjct: 252 EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARN 311
Query: 434 GVEGESLQLFELMMQED-IVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAK 492
G ++ F+ M +++ + P+ IT I++L A A + EG+ + G P
Sbjct: 312 GRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRR-GFLPHMV 366
Query: 493 HFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQL 552
+ ++D+ G G+L+ AE I + M + I W +++ A ++G A F +L
Sbjct: 367 LETALIDMYGECGQLKSAEVIFDRMA-EKNVISWNSIIAAYVQNGK---NYSALELFQEL 422
Query: 553 EPHNAVP 559
+ VP
Sbjct: 423 WDSSLVP 429
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 236/480 (49%), Gaps = 22/480 (4%)
Query: 71 RTSFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHG 130
R +++T N + + + A +LFDE+ + D +N +I G +
Sbjct: 53 RDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYI 112
Query: 131 PAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLV--MQLHCFAVLCGYSCYASVCNAVL 188
AV+ + AG+ D FT VIK+ L ++H + G+ VCN+++
Sbjct: 113 EAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLI 172
Query: 189 ARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKID 248
+ Y G +A +VF EM E RD +SWN+MI +G +L+LF EM++ G K D
Sbjct: 173 SLYMKLGCAWDAEKVFEEMPE--RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPD 230
Query: 249 MFTMASVLTAFTCLEDLAGGMQFHGRMIKSGF-NWNPHVGSGLIDMYSKCAPRGMLDCMK 307
F+ S L A + + G + H ++S + V + ++DMYSK + +
Sbjct: 231 RFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAE--R 288
Query: 308 VFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDM-QRAGFRPDDCSFSCVTSACSNL 366
+F + + ++V WN MI ++++ ++ DA +CFQ M ++ G +PD V ++ + L
Sbjct: 289 IFNGMIQRNIVAWNVMIGCYARNGRVT-DAFLCFQKMSEQNGLQPD------VITSINLL 341
Query: 367 SSPSL--GKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLN 424
+ ++ G+ +H A++ + V + AL+ MY +CG L A +FD M E N +S N
Sbjct: 342 PASAILEGRTIHGYAMRRGFLPHMV-LETALIDMYGECGQLKSAEVIFDRMAEKNVISWN 400
Query: 425 SMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQK-YFNMMKE 483
S+I Y Q+G +L+LF+ + +VP++ T S+L A A + + EG++ + ++K
Sbjct: 401 SIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKS 460
Query: 484 KFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAV 543
++ + +V + G LE+A + + + W +++ A HG ++V
Sbjct: 461 RYW--SNTIILNSLVHMYAMCGDLEDARKCFNHILLKD-VVSWNSIIMAYAVHGFGRISV 517
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/626 (34%), Positives = 340/626 (54%), Gaps = 46/626 (7%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF +L C S+ I G LH L + + + + N +YSKCG D+A FR+
Sbjct: 241 TFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRM- 299
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+ R D V++N +I+ + G ++ F
Sbjct: 300 ------------------------------MSRADTVTWNCMISGYVQSGLMEESLTFFY 329
Query: 138 EAREAGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVL-ARYGGR 194
E +G+ D T S ++ + E++ Q+HC+ + S + +A++ A + R
Sbjct: 330 EMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCR 389
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGK--EALVLFGEMVRMGMKIDMFTM 252
G +S A +F + D + + AMI G G ++L +F +V++ + + T+
Sbjct: 390 G-VSMAQNIFSQCNS--VDVVVFTAMI--SGYLHNGLYIDSLEMFRWLVKVKISPNEITL 444
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEI 312
S+L L L G + HG +IK GF+ ++G +IDMY+KC + ++FE +
Sbjct: 445 VSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNL--AYEIFERL 502
Query: 313 SEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLG 372
S+ D+V WN+MI+ +Q ++ S A+ F+ M +G D S S SAC+NL S S G
Sbjct: 503 SKRDIVSWNSMITRCAQSDNPSA-AIDIFRQMGVSGICYDCVSISAALSACANLPSESFG 561
Query: 373 KQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQ 432
K +H IK + S+ S + L+ MY+KCGNL A VF TM E N VS NS+I
Sbjct: 562 KAIHGFMIKHSLASDVYS-ESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGN 620
Query: 433 HGVEGESLQLF-ELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEA 491
HG +SL LF E++ + I P+ ITF+ ++S+C H G V+EG ++F M E +GI+P+
Sbjct: 621 HGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQ 680
Query: 492 KHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ 551
+H++C+VDL GRAG+L EA +++MPF P + W LLGACR H NVELA A++K +
Sbjct: 681 EHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMD 740
Query: 552 LEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDS 611
L+P N+ YV++SN +A+A WE V+ LM+ER V+K PG SWI+I+ + H+FV+ D
Sbjct: 741 LDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDV 800
Query: 612 SHPMIKEIHEYMGEMLRKMKQAGYVP 637
+HP I+ + +L +++ GY+P
Sbjct: 801 NHPESSHIYSLLNSLLGELRLEGYIP 826
Score = 182 bits (461), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 141/593 (23%), Positives = 256/593 (43%), Gaps = 82/593 (13%)
Query: 22 LLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGT----------LDNAR 71
LL+ C + + GK +HA I I +Y +Y+ CG+ LD R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 72 TSFRLTN---------------------------NPNVFSYNAIIDACV----------- 93
+S R N +P+V ++ ++ ACV
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 94 ------------------------KHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEH 129
++ + + +LFD + + D V +N ++ +A G
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 130 GPAVRLFKEAREAGLCLDGFTLSGVIKACRED--VGLVMQLHCFAVLCGYSCYASVCNAV 187
++ F R + + T V+ C + L +QLH V+ G S+ N++
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 188 LARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKI 247
L+ Y G +A ++F M D ++WN MI Q +E+L F EM+ G+
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRA--DTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP 338
Query: 248 DMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMK 307
D T +S+L + + E+L Q H +++ + + + S LID Y KC RG+
Sbjct: 339 DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKC--RGVSMAQN 396
Query: 308 VFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLS 367
+F + + D+V++ MISG+ H L D+L F+ + + P++ + + L
Sbjct: 397 IFSQCNSVDVVVFTAMISGY-LHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILL 455
Query: 368 SPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMI 427
+ LG+++H IK NR ++ A++ MY+KCG ++ A +F+ + + + VS NSMI
Sbjct: 456 ALKLGRELHGFIIKKGF-DNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMI 514
Query: 428 TGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGI 487
T AQ ++ +F M I + ++ + LSACA+ G+ M K +
Sbjct: 515 TRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMI-KHSL 573
Query: 488 EPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVE 540
+ S ++D+ + G L+ A + +TM + + W +++ AC HG ++
Sbjct: 574 ASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGKLK 625
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 96/209 (45%), Gaps = 8/209 (3%)
Query: 356 FSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTM 415
S + ACSN + GKQVHA I + I + + + ++ MY+ CG+ D ++F +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYT-DERILGMYAMCGSFSDCGKMFYRL 96
Query: 416 P--EHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEE 473
+ NS+I+ + ++G+ ++L + M+ + P+ TF ++ AC K +
Sbjct: 97 DLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVAL-KNFK 155
Query: 474 GQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGAC 533
G + + G++ S ++ GK++ ++ + + + W +L
Sbjct: 156 GIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV-LQKDCVIWNVMLNGY 214
Query: 534 RKHGNVELAVK--AANKFLQLEPHNAVPY 560
K G ++ +K + + Q+ P NAV +
Sbjct: 215 AKCGALDSVIKGFSVMRMDQISP-NAVTF 242
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/518 (37%), Positives = 304/518 (58%), Gaps = 10/518 (1%)
Query: 214 EISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHG 273
E W AM + + ++AL+++ +M+ ++ F+++ L A L+DL G H
Sbjct: 201 EKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHA 260
Query: 274 RMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD-CMKVFEEISEPDLVLWNTMISGFSQHED 332
+++K + V + L+ +Y + G+ D KVF+ +SE ++V WN++IS S+
Sbjct: 261 QIVKRKEKVDQVVYNVLLKLYMES---GLFDDARKVFDGMSERNVVTWNSLISVLSKKVR 317
Query: 333 LSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVN 392
+ E F+ MQ + + + ACS +++ GK++HA +KS + V +
Sbjct: 318 VHE-MFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPD-VPLL 375
Query: 393 NALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIV 452
N+L+ MY KCG + +RRVFD M + S N M+ YA +G E + LFE M++ +
Sbjct: 376 NSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVA 435
Query: 453 PNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAER 512
P+ ITF+++LS C+ TG E G F MK +F + P +H++C+VD+LGRAGK++EA +
Sbjct: 436 PDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVK 495
Query: 513 IIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGR 572
+IETMPF P + W +LL +CR HGNV + AA + LEPHN YVM+SN+YA A
Sbjct: 496 VIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKM 555
Query: 573 WEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDS-SHPMIKEIHEYMGEMLRKMK 631
W+ ++ +M++RGVKK+ GCSW+Q+ +K+ +FVA E + E+ ++
Sbjct: 556 WDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIE 615
Query: 632 QAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLRICGD 691
++GY P+ L DV E K + HSE+LA + LI T EGVPI + KNLR+C D
Sbjct: 616 KSGYSPNTSVVL---HDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCAD 672
Query: 692 CHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
CH+ +K++S ++ R I +RD RFH F +G CSCKDYW
Sbjct: 673 CHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 111/478 (23%), Positives = 203/478 (42%), Gaps = 41/478 (8%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKT-FIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
+T+LL CIS + + G + +L + + H+ L + L+S C LD AR F
Sbjct: 134 YTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDV 193
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+ ++ + + +S + PR ++ Y ++ + G
Sbjct: 194 TDSSLLTEKVWAAMAIGYSR--------NGSPRDALIVYVDMLCSFIEPG---------- 235
Query: 138 EAREAGLCLDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
F++S +KAC + D+ + +H V V N +L Y G
Sbjct: 236 ----------NFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESG 285
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
L +A +VF M E R+ ++WN++I + E LF +M + T+ ++
Sbjct: 286 LFDDARKVFDGMSE--RNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTI 343
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEP 315
L A + + L G + H +++KS + + + L+DMY KC +VF+ +
Sbjct: 344 LPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEY--SRRVFDVMLTK 401
Query: 316 DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQV 375
DL WN M++ ++ + ++ E+ + F+ M +G PD +F + S CS+ G +
Sbjct: 402 DLASWNIMLNCYAINGNI-EEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSL 460
Query: 376 HALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSL-NSMITGYAQHG 434
S + LV + + G + +A +V +TMP + S+ S++ HG
Sbjct: 461 FERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHG 520
Query: 435 -VEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEA 491
V + EL + E P N +S + A A + K MMK++ G++ EA
Sbjct: 521 NVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMW--DNVDKIREMMKQR-GVKKEA 575
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/518 (37%), Positives = 302/518 (58%), Gaps = 41/518 (7%)
Query: 248 DMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKC---------- 297
D T +L +F L G + H +++ G + +P V + L++MYS C
Sbjct: 61 DFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVF 120
Query: 298 ------------------APRGMLD-CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDAL 338
A G++D K+F+E+ E +++ W+ +I+G+ E AL
Sbjct: 121 DDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKE-AL 179
Query: 339 ICFQDMQ-----RAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNN 393
F++MQ A RP++ + S V SAC L + GK VHA K + + + +
Sbjct: 180 DLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEID-IVLGT 238
Query: 394 ALVAMYSKCGNLHDARRVFDTMPEHNTV-SLNSMITGYAQHGVEGESLQLF-ELMMQEDI 451
AL+ MY+KCG+L A+RVF+ + V + ++MI A +G+ E QLF E+ ++I
Sbjct: 239 ALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNI 298
Query: 452 VPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAE 511
PN++TF+ +L AC H G + EG+ YF MM E+FGI P +H+ CMVDL GR+G ++EAE
Sbjct: 299 NPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAE 358
Query: 512 RIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAG 571
I +MP +P + W +LL R G+++ A + ++L+P N+ YV+LSN+YA G
Sbjct: 359 SFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTG 418
Query: 572 RWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMK 631
RW E ++ M +G+ K PGCS+++++ VH FV D S + I+ + E++++++
Sbjct: 419 RWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLR 478
Query: 632 QAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLRICGD 691
+AGYV D + L D+ ++KE L YHSEKLA+AF L+ T+ G P+ ++KNLRICGD
Sbjct: 479 EAGYVTDTKEVL---LDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGD 535
Query: 692 CHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
CH +K+IS + REI VRD +RFH F++G CSC+D+W
Sbjct: 536 CHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 148/322 (45%), Gaps = 19/322 (5%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF LL + + G+ HA + + ++ +YS CG L +A+ F +
Sbjct: 64 TFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDS 123
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+ ++ ++N++++A K + AR+LFDE+P +++S++ LI + G++ A+ LF+
Sbjct: 124 GSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFR 183
Query: 138 EAR-----EAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVC--NAVLAR 190
E + EA + + FT+S V+ AC L A + Y + A++
Sbjct: 184 EMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDM 243
Query: 191 YGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRM-GMKIDM 249
Y G L A RVF+ +G +D +++AMI E LF EM + +
Sbjct: 244 YAKCGSLERAKRVFNALGSK-KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNS 302
Query: 250 FTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNP---HVGSGLIDMYSKCAPRGMLDCM 306
T +L A + G + MI+ F P H G ++D+Y + G++
Sbjct: 303 VTFVGILGACVHRGLINEGKSYFKMMIEE-FGITPSIQHYGC-MVDLYGR---SGLIKEA 357
Query: 307 KVF--EEISEPDLVLWNTMISG 326
+ F EPD+++W +++SG
Sbjct: 358 ESFIASMPMEPDVLIWGSLLSG 379
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 360 bits (925), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 211/586 (36%), Positives = 326/586 (55%), Gaps = 15/586 (2%)
Query: 150 TLSGVIKAC--REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEM 207
T +++AC + + V +++ F + G+ + N +L + G++ +A R+F E+
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 208 GEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAG 267
E R+ S+ ++I EA LF M + T A +L A L +
Sbjct: 185 PE--RNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYV 242
Query: 268 GMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGF 327
G Q H +K G N V GLIDMYSKC + D FE + E V WN +I+G+
Sbjct: 243 GKQLHVCALKLGVVDNTFVSCGLIDMYSKCGD--IEDARCAFECMPEKTTVAWNNVIAGY 300
Query: 328 SQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSN 387
+ H SE+AL DM+ +G D + S + + L+ L KQ HA I++ S
Sbjct: 301 ALH-GYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESE 359
Query: 388 RVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMM 447
V+ N ALV YSK G + AR VFD +P N +S N+++ GYA HG ++++LFE M+
Sbjct: 360 IVA-NTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMI 418
Query: 448 QEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKL 507
++ PN++TF++VLSACA++G E+G + F M E GI+P A H++CM++LLGR G L
Sbjct: 419 AANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLL 478
Query: 508 EEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMY 567
+EA I P WAALL ACR N+EL A K + P YV++ NMY
Sbjct: 479 DEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMY 538
Query: 568 ASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDS----SHPMIKEIHEYM 623
S G+ E+A V + +G+ P C+W+++ ++ H F++ D + + ++I++ +
Sbjct: 539 NSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKV 598
Query: 624 GEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVV 683
E++ ++ + GY + + L DV +E+ER YHSEKLA+A+GL++T E P+ +
Sbjct: 599 DELMEEISEYGYSEEEQHLL---PDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQIT 655
Query: 684 KNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
+N RIC +CH ++ IS ++GRE+ VRDA RFH FKEG CSC YW
Sbjct: 656 QNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 183/370 (49%), Gaps = 13/370 (3%)
Query: 227 CREGKEALVLFGEM-VRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPH 285
C +EA LF + +R K+ + T +++ A L+ + + +G M+ +GF +
Sbjct: 100 CNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQY 159
Query: 286 VGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQ 345
+ + ++ M+ KC ++D ++F+EI E +L + ++ISGF + E A F+ M
Sbjct: 160 MMNRILLMHVKCGM--IIDARRLFDEIPERNLYSYYSIISGFVNFGNYVE-AFELFKMMW 216
Query: 346 RAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNL 405
+ +F+ + A + L S +GKQ+H A+K + N V+ L+ MYSKCG++
Sbjct: 217 EELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTF-VSCGLIDMYSKCGDI 275
Query: 406 HDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSAC 465
DAR F+ MPE TV+ N++I GYA HG E+L L M + + T ++
Sbjct: 276 EDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRIS 335
Query: 466 AHTGKVE-EGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSI 524
K+E Q + ++++ G E E + +VD + G+++ A + + +P I
Sbjct: 336 TKLAKLELTKQAHASLIRN--GFESEIVANTALVDFYSKWGRVDTARYVFDKLP-RKNII 392
Query: 525 EWAALLGACRKHGNVELAVKAANKFL--QLEPHNAVPYVMLSNMYASAGRWEESATVKRL 582
W AL+G HG AVK K + + P N V ++ + + A +G E+ +
Sbjct: 393 SWNALMGGYANHGRGTDAVKLFEKMIAANVAP-NHVTFLAVLSACAYSGLSEQGWEIFLS 451
Query: 583 MRE-RGVKKK 591
M E G+K +
Sbjct: 452 MSEVHGIKPR 461
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 82 VFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEARE 141
+ + A++D K + AR +FD++PR +I+S+N L+ +A+ G AV+LF++
Sbjct: 360 IVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIA 419
Query: 142 AGLCLDGFTLSGVIKAC 158
A + + T V+ AC
Sbjct: 420 ANVAPNHVTFLAVLSAC 436
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 360 bits (923), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 199/543 (36%), Positives = 311/543 (57%), Gaps = 12/543 (2%)
Query: 189 ARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKID 248
A G ++ A +F + + C +N MI +EAL + EM++ G + D
Sbjct: 74 AHSGWENSMNYAASIFRGIDDPC--TFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPD 131
Query: 249 MFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKV 308
FT +L A T L+ + G Q HG++ K G + V + LI+MY +C + V
Sbjct: 132 NFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSA--V 189
Query: 309 FEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDM-QRAGFRPDDCSFSCVTSACSNLS 367
FE++ W++M+S + SE L+ F+ M + ++ AC+N
Sbjct: 190 FEKLESKTAASWSSMVSARAGMGMWSE-CLLLFRGMCSETNLKAEESGMVSALLACANTG 248
Query: 368 SPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMI 427
+ +LG +H ++ +I + V +LV MY KCG L A +F M + N ++ ++MI
Sbjct: 249 ALNLGMSIHGFLLR-NISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMI 307
Query: 428 TGYAQHGVEGES-LQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFG 486
+G A HG EGES L++F M++E + P+++ ++SVL+AC+H+G V+EG++ F M ++
Sbjct: 308 SGLALHG-EGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGK 366
Query: 487 IEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAA 546
+EP A+H+ C+VDLLGRAG LEEA I+++P + + W L CR N+EL AA
Sbjct: 367 VEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAA 426
Query: 547 NKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVF 606
+ L+L HN Y+++SN+Y+ W++ A + + +G+K+ PG S +++ K H F
Sbjct: 427 QELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRF 486
Query: 607 VAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLA 666
V++D SHP KEI++ + +M ++K GY PD+ L +V EEK+ RL HS+K+A
Sbjct: 487 VSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQIL---LNVDEEEKKERLKGHSQKVA 543
Query: 667 VAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCK 726
+AFGL+ T G I + +NLR+C DCH K IS I REI VRD +RFH FK G CSCK
Sbjct: 544 IAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCK 603
Query: 727 DYW 729
DYW
Sbjct: 604 DYW 606
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 161/371 (43%), Gaps = 12/371 (3%)
Query: 98 LHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKA 157
++ A +F I P +NT+I + + A+ + E + G D FT ++KA
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141
Query: 158 CR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEI 215
C + + Q+H G V N+++ YG G + + VF ++ +
Sbjct: 142 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLES--KTAA 199
Query: 216 SWNAMIVACGQCREGKEALVLF-GEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGR 274
SW++M+ A E L+LF G +K + M S L A L GM HG
Sbjct: 200 SWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGF 259
Query: 275 MIKSGFNWNPHVGSGLIDMYSKCAPRGMLD-CMKVFEEISEPDLVLWNTMISGFSQHEDL 333
++++ N V + L+DMY KC G LD + +F+++ + + + ++ MISG + H +
Sbjct: 260 LLRNISELNIIVQTSLVDMYVKC---GCLDKALHIFQKMEKRNNLTYSAMISGLALHGE- 315
Query: 334 SEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNN 393
E AL F M + G PD + V +ACS+ G++V A +K
Sbjct: 316 GESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYG 375
Query: 394 ALVAMYSKCGNLHDARRVFDTMP-EHNTVSLNSMITG-YAQHGVEGESLQLFELMMQEDI 451
LV + + G L +A ++P E N V + ++ + +E + EL+
Sbjct: 376 CLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSH 435
Query: 452 VPNNITFISVL 462
P + IS L
Sbjct: 436 NPGDYLLISNL 446
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 144/344 (41%), Gaps = 46/344 (13%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T+ LLK C + I GK +H F+L
Sbjct: 134 TYPCLLKACTRLKSIREGKQIHG-------------------------------QVFKLG 162
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+VF N++I+ + + L+ +F+++ S++++++A A G + LF+
Sbjct: 163 LEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFR 222
Query: 138 E-AREAGLCLDGFTLSGVIKACRED--VGLVMQLHCFAVLCGYSCYASVCNAVLARYGGR 194
E L + + + AC + L M +H F + V +++ Y
Sbjct: 223 GMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKC 282
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
G L +A +F +M + R+ ++++AMI EG+ AL +F +M++ G++ D S
Sbjct: 283 GCLDKALHIFQKMEK--RNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVS 340
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNP---HVGSGLIDMYSKCAPRGML-DCMKVFE 310
VL A + + G + M+K G P H G L+D+ + G+L + ++ +
Sbjct: 341 VLNACSHSGLVKEGRRVFAEMLKEG-KVEPTAEHYGC-LVDLLGRA---GLLEEALETIQ 395
Query: 311 EIS-EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDD 353
I E + V+W T +S +++ + + ++ + P D
Sbjct: 396 SIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGD 439
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 358 bits (920), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 237/753 (31%), Positives = 382/753 (50%), Gaps = 80/753 (10%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF +L C+ S G +H L +K+ +S ++SN LY K D+ +
Sbjct: 183 TFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDK----DSGSSC---- 234
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
D +K LFDEIP+ D+ S+NT++++ G+ A LF
Sbjct: 235 ------------DDVLK---------LFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFY 273
Query: 138 EA-REAGLCLDGFTLSGVIKACREDVGLVM--QLHCFAVLCGYSCYASVCNAVLARYG-- 192
E R G +D FTLS ++ +C + L+ +LH A+ G SV NA++ Y
Sbjct: 274 EMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKF 333
Query: 193 -----------------------------GRGLLSEAWRVFHEMGEGCRDEISWNAMIVA 223
G++ A +F + E ++ I++NA++
Sbjct: 334 WDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTE--KNTITYNALM-- 389
Query: 224 CGQCREGK--EALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFN 281
G CR G +AL LF +M++ G+++ F++ S + A + + Q HG IK G
Sbjct: 390 AGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTA 449
Query: 282 WNPHVGSGLIDMYSKCAPRGMLDCMKVFEEI-SEPDLVLWNTMISGFSQHEDLSEDALIC 340
+NP + + L+DM ++C M D ++F++ S D T I G L + A+
Sbjct: 450 FNPCIQTALLDMCTRC--ERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSL 507
Query: 341 F-QDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMY 399
F + + D+ S + + + C L +G Q+H A+K+ S+ +S+ N+L++MY
Sbjct: 508 FHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSD-ISLGNSLISMY 566
Query: 400 SKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFI 459
+KC + DA ++F+TM EH+ +S NS+I+ Y E+L L+ M +++I P+ IT
Sbjct: 567 AKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLT 626
Query: 460 SVLSACAHT--GKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETM 517
V+SA +T K+ + F MK + IEP +H++ V +LG G LEEAE I +M
Sbjct: 627 LVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSM 686
Query: 518 PFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESA 577
P P ALL +CR H N +A + A L +P Y++ SN+Y+++G W S
Sbjct: 687 PVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSE 746
Query: 578 TVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVP 637
++ MRERG +K P SWI +NK+H F A D+SHP K+I+ + ++ + + GY P
Sbjct: 747 MIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILIMECLKVGYEP 806
Query: 638 DIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTK-EGVPILVVKNLRICGDCHNAI 696
+ + L ++V K+ L +HS KLAV +G++S+ G P+ V+KN+ +CGDCH
Sbjct: 807 NTEYVL---QEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMKNVMLCGDCHEFF 863
Query: 697 KLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
K IS + REI +RD+ FH F G CSC+D W
Sbjct: 864 KYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 126/531 (23%), Positives = 242/531 (45%), Gaps = 51/531 (9%)
Query: 86 NAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLC 145
NA+I +K A +F + P +VSY LI+ + A+++F R+AGL
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 146 L-DGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLS--EA 200
+ +T ++ AC L +Q+H V G+ V N++++ Y S +
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 201 WRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRM-GMKIDMFTMASVLTAF 259
++F E+ + RD SWN ++ + + + +A LF EM R+ G +D FT++++L++
Sbjct: 238 LKLFDEIPQ--RDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSC 295
Query: 260 TCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKC---------------------- 297
T L G + HGR I+ G V + LI YSK
Sbjct: 296 TDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFT 355
Query: 298 ------APRGMLD-CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFR 350
GM+D +++F ++E + + +N +++GF ++ AL F DM + G
Sbjct: 356 EMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGH-GLKALKLFTDMLQRGVE 414
Query: 351 PDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARR 410
D S + AC +S + +Q+H IK N + AL+ M ++C + DA
Sbjct: 415 LTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPC-IQTALLDMCTRCERMADAEE 473
Query: 411 VFDTMPEH--NTVSLNSMITGYAQHGVEGESLQLFELMM-QEDIVPNNITFISVLSACAH 467
+FD P + ++ + S+I GYA++G+ +++ LF + ++ + + ++ +L+ C
Sbjct: 474 MFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGT 533
Query: 468 TGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWA 527
G E G + + K G + + ++ + + ++A +I TM + I W
Sbjct: 534 LGFREMGYQ-IHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMR-EHDVISWN 591
Query: 528 ALLG--ACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEES 576
+L+ +++G+ LA+ + ++ P ++ + SA R+ ES
Sbjct: 592 SLISCYILQRNGDEALALWS-----RMNEKEIKPDIITLTLVISAFRYTES 637
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 184/379 (48%), Gaps = 12/379 (3%)
Query: 137 KEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGL 196
+E + +DGF + A DV + +H + L + NA+++ Y G
Sbjct: 71 EETEDIESVIDGFFYLLRLSAQYHDVEVTKAVHA-SFLKLREEKTRLGNALISTYLKLGF 129
Query: 197 LSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGM-KIDMFTMASV 255
EA VF + +S+ A+I + EAL +F M + G+ + + +T ++
Sbjct: 130 PREAILVFVSLSSPTV--VSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAI 187
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEP 315
LTA + + G+Q HG ++KSGF + V + L+ +Y K + D +K+F+EI +
Sbjct: 188 LTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQR 247
Query: 316 DLVLWNTMISGFSQHEDLSEDALICFQDMQRA-GFRPDDCSFSCVTSACSNLSSPSLGKQ 374
D+ WNT++S + E S A F +M R GF D + S + S+C++ S G++
Sbjct: 248 DVASWNTVVSSLVK-EGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRE 306
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHG 434
+H AI+ + +SVNNAL+ YSK ++ +++ M + V+ MIT Y G
Sbjct: 307 LHGRAIRIGL-MQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFG 365
Query: 435 VEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHF 494
+ ++++F + ++ N IT+ ++++ G + K F M ++ G+E
Sbjct: 366 MVDSAVEIFANVTEK----NTITYNALMAGFCRNGHGLKALKLFTDMLQR-GVELTDFSL 420
Query: 495 SCMVDLLGRAGKLEEAERI 513
+ VD G + + +E+I
Sbjct: 421 TSAVDACGLVSEKKVSEQI 439
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 350 bits (898), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 193/557 (34%), Positives = 318/557 (57%), Gaps = 15/557 (2%)
Query: 101 ARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACRE 160
AR LFDE+P D+V++ +I +A + A F E + G + FTLS V+K+CR
Sbjct: 64 ARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRN 123
Query: 161 DVGLVMQ--LHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAW-RVFHEMGEGCRDEISW 217
L +H V G V NA++ Y + EA +F ++ +++++W
Sbjct: 124 MKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIK--VKNDVTW 181
Query: 218 NAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIK 277
+I +G L ++ +M+ ++ + + + A ++ + G Q H +IK
Sbjct: 182 TTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIK 241
Query: 278 SGFNWNPHVGSGLIDMYSKCAPRGMLDCMK-VFEEISEPDLVLWNTMISGFSQHEDLSED 336
GF N V + ++D+Y +C G L K F E+ + DL+ WNT+IS + + S +
Sbjct: 242 RGFQSNLPVMNSILDLYCRC---GYLSEAKHYFHEMEDKDLITWNTLISELERSD--SSE 296
Query: 337 ALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALV 396
AL+ FQ + GF P+ +F+ + +AC+N+++ + G+Q+H + N V + NAL+
Sbjct: 297 ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKN-VELANALI 355
Query: 397 AMYSKCGNLHDARRVF-DTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNN 455
MY+KCGN+ D++RVF + + N VS SM+ GY HG E+++LF+ M+ I P+
Sbjct: 356 DMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDR 415
Query: 456 ITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIE 515
I F++VLSAC H G VE+G KYFN+M+ ++GI P+ ++C+VDLLGRAGK+ EA ++E
Sbjct: 416 IVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVE 475
Query: 516 TMPFDPGSIEWAALLGACRKHGNVELAVK-AANKFLQLEPHNAVPYVMLSNMYASAGRWE 574
MPF P W A+LGAC+ H + L + AA K ++L+P YVMLS +YA+ G+W
Sbjct: 476 RMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWV 535
Query: 575 ESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAG 634
+ A V+++MR G KK+ G SWI ++N+V F D P ++ +G ++ + ++AG
Sbjct: 536 DFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAG 595
Query: 635 YVPDIRWALGKDEDVAA 651
YVP++ +L D++V
Sbjct: 596 YVPELD-SLVNDQEVGT 611
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/446 (21%), Positives = 176/446 (39%), Gaps = 79/446 (17%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTN 78
T ++ S ++TGK +HA IK + + N LY +CG
Sbjct: 216 ITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCG------------- 262
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
+L A+ F E+ D++++NTLI + R + A+ +F+
Sbjct: 263 ------------------YLSEAKHYFHEMEDKDLITWNTLI-SELERSDSSEALLMFQR 303
Query: 139 AREAGLCLDGFTLSGVIKACREDVGLV--MQLHCFAVLCGYSCYASVCNAVLARYGGRGL 196
G + +T + ++ AC L QLH G++ + NA++ Y G
Sbjct: 304 FESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGN 363
Query: 197 LSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVL 256
+ ++ RVF E+ + R+ +SW +M++ G G EA+ LF +MV G++ D +VL
Sbjct: 364 IPDSQRVFGEIVDR-RNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVL 422
Query: 257 TAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPD 316
+A H +++ G + + M+ I+ PD
Sbjct: 423 SACR-----------HAGLVEKGLKY--------------------FNVMESEYGIN-PD 450
Query: 317 LVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVH 376
++N ++ + + E ++ ++R F+PD+ ++ + AC L ++
Sbjct: 451 RDIYNCVVDLLGRAGKIGE----AYELVERMPFKPDESTWGAILGACKAHKHNGLISRLA 506
Query: 377 ALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVE 436
A + ++ V L +Y+ G D RV M N G + VE
Sbjct: 507 ARKVM-ELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMG----NKKEAGMSWILVE 561
Query: 437 GESLQLFELMMQEDIVPNNITFISVL 462
Q+F + + + PN + SVL
Sbjct: 562 N---QVFSFAVSDKMCPNASSVYSVL 584
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 2/176 (1%)
Query: 395 LVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPN 454
L+ Y + G + +AR +FD MP+ + V+ +MITGYA + + F M+++ PN
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPN 110
Query: 455 NITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERII 514
T SVL +C + + G ++ K G+E + M+++ EA +I
Sbjct: 111 EFTLSSVLKSCRNMKVLAYGALVHGVVV-KLGMEGSLYVDNAMMNMYATCSVTMEAACLI 169
Query: 515 ETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASA 570
+ W L+ G+ +K + L LE PY + + ASA
Sbjct: 170 FRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQML-LENAEVTPYCITIAVRASA 224
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 349 bits (895), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 224/628 (35%), Positives = 326/628 (51%), Gaps = 63/628 (10%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
+FT L C + G+ +H +K + + Y+ +YSKCG + A T F
Sbjct: 274 SFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVF--- 330
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+CV L + +N ++AA+A A+ LF
Sbjct: 331 -------------SCVVDKRLEI---------------WNAMVAAYAENDYGYSALDLFG 362
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYA-----------SVCNA 186
R+ + D FTLS VI C V+ L+ + G S +A ++ +A
Sbjct: 363 FMRQKSVLPDSFTLSNVISCCS-----VLGLYNY----GKSVHAELFKRPIQSTSTIESA 413
Query: 187 VLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGK--EALVLFGEMVRM- 243
+L Y G +A+ VF M E +D ++W ++I G C+ GK EAL +FG+M
Sbjct: 414 LLTLYSKCGCDPDAYLVFKSMEE--KDMVAWGSLI--SGLCKNGKFKEALKVFGDMKDDD 469
Query: 244 -GMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGM 302
+K D M SV A LE L G+Q HG MIK+G N VGS LID+YSKC M
Sbjct: 470 DSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEM 529
Query: 303 LDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSA 362
+KVF +S ++V WN+MIS +S++ +L E ++ F M G PD S + V A
Sbjct: 530 --ALKVFTSMSTENMVAWNSMISCYSRN-NLPELSIDLFNLMLSQGIFPDSVSITSVLVA 586
Query: 363 CSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVS 422
S+ +S GK +H ++ IPS+ + NAL+ MY KCG A +F M + ++
Sbjct: 587 ISSTASLLKGKSLHGYTLRLGIPSD-THLKNALIDMYVKCGFSKYAENIFKKMQHKSLIT 645
Query: 423 LNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMK 482
N MI GY HG +L LF+ M + P+++TF+S++SAC H+G VEEG+ F MK
Sbjct: 646 WNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMK 705
Query: 483 EKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELA 542
+ +GIEP +H++ MVDLLGRAG LEEA I+ MP + S W LL A R H NVEL
Sbjct: 706 QDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELG 765
Query: 543 VKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNK 602
+ +A K L++EP YV L N+Y AG E+A + LM+E+G+ K+PGCSWI++ ++
Sbjct: 766 ILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDR 825
Query: 603 VHVFVAEDSSHPMIKEIHEYMGEMLRKM 630
+VF + SS PM EI + + M
Sbjct: 826 TNVFFSGGSSSPMKAEIFNVLNRLKSNM 853
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 148/543 (27%), Positives = 251/543 (46%), Gaps = 43/543 (7%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF +LLK C + ++S GK++H + + +++ +Y KCG LD A F
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVF--- 118
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
D + AR D+ +N++I + V F+
Sbjct: 119 ------------DGWSQSQSGVSAR---------DVTVWNSMIDGYFKFRRFKEGVGCFR 157
Query: 138 EAREAGLCLDGFTLSGVIKA-CRE-----DVGLVMQLHCFAVLCGYSCYASVCNAVLARY 191
G+ D F+LS V+ C+E + G Q+H F + + + A++ Y
Sbjct: 158 RMLVFGVRPDAFSLSIVVSVMCKEGNFRREEG--KQIHGFMLRNSLDTDSFLKTALIDMY 215
Query: 192 GGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFT 251
GL +AWRVF E+ E + + WN MIV G + +L L+ +K+ +
Sbjct: 216 FKFGLSIDAWRVFVEI-EDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTS 274
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEE 311
L A + E+ G Q H ++K G + +P+V + L+ MYSKC G + VF
Sbjct: 275 FTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVG--EAETVFSC 332
Query: 312 ISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSL 371
+ + L +WN M++ ++++ D AL F M++ PD + S V S CS L +
Sbjct: 333 VVDKRLEIWNAMVAAYAEN-DYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNY 391
Query: 372 GKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYA 431
GK VHA K I S ++ +AL+ +YSKCG DA VF +M E + V+ S+I+G
Sbjct: 392 GKSVHAELFKRPIQSTS-TIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLC 450
Query: 432 QHGVEGESLQLFELMMQED--IVPNNITFISVLSACAHTGKVEEG-QKYFNMMKEKFGIE 488
++G E+L++F M +D + P++ SV +ACA + G Q + +M+K G+
Sbjct: 451 KNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT--GLV 508
Query: 489 PEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANK 548
S ++DL + G E A ++ +M + + W +++ ++ EL++ N
Sbjct: 509 LNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMISCYSRNNLPELSIDLFNL 567
Query: 549 FLQ 551
L
Sbjct: 568 MLS 570
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 348 bits (894), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 196/564 (34%), Positives = 326/564 (57%), Gaps = 37/564 (6%)
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
LL A+ +F ++ + +N +I E +A + +M++ + D T +
Sbjct: 66 LLGYAYGIFSQIQN--PNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFL 123
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKC-----APR---------- 300
+ A + +E + G Q H ++++ GF + +V + L+ MY+ C A R
Sbjct: 124 IKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDV 183
Query: 301 -------------GMLD-CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQR 346
GM++ ++F+E+ +L W+ MI+G++++ + E A+ F+ M+R
Sbjct: 184 VSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKN-NCFEKAIDLFEFMKR 242
Query: 347 AGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLH 406
G ++ V S+C++L + G++ + +KS + N + + ALV M+ +CG++
Sbjct: 243 EGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLI-LGTALVDMFWRCGDIE 301
Query: 407 DARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACA 466
A VF+ +PE +++S +S+I G A HG +++ F M+ +P ++TF +VLSAC+
Sbjct: 302 KAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACS 361
Query: 467 HTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEW 526
H G VE+G + + MK+ GIEP +H+ C+VD+LGRAGKL EAE I M P +
Sbjct: 362 HGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPIL 421
Query: 527 AALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRER 586
ALLGAC+ + N E+A + N ++++P ++ YV+LSN+YA AG+W++ +++ +M+E+
Sbjct: 422 GALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEK 481
Query: 587 GVKKKPGCSWIQIDNKVHVF-VAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGK 645
VKK PG S I+ID K++ F + +D HP + +I E+L K++ GY + A
Sbjct: 482 LVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFF- 540
Query: 646 DEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGR 705
DV EEKE + HSEKLA+A+G++ TK G I +VKNLR+C DCH KLIS + GR
Sbjct: 541 --DVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGR 598
Query: 706 EITVRDAHRFHCFKEGHCSCKDYW 729
E+ VRD +RFH F+ G CSC+DYW
Sbjct: 599 ELIVRDRNRFHHFRNGVCSCRDYW 622
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 119/502 (23%), Positives = 211/502 (42%), Gaps = 59/502 (11%)
Query: 81 NVFSYNAIIDACVKHSH-------LHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAV 133
+VF + ++ CV S L A +F +I P++ +N LI + E A
Sbjct: 43 DVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAF 102
Query: 134 RLFKEAREAGLCLDGFTLSGVIKACREDVGLVM--QLHCFAVLCGYSCYASVCNAVLARY 191
+ + ++ + D T +IKA E +++ Q H V G+ V N+++ Y
Sbjct: 103 GFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMY 162
Query: 192 GGRGLLSEAWRVFHEMGEGCRDEISWNAMIVA---CGQCREGKE---------------- 232
G ++ A R+F +MG RD +SW +M+ CG +E
Sbjct: 163 ANCGFIAAAGRIFGQMG--FRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIM 220
Query: 233 ------------ALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGF 280
A+ LF M R G+ + M SV+++ L L G + + ++KS
Sbjct: 221 INGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHM 280
Query: 281 NWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALIC 340
N +G+ L+DM+ +C + + VFE + E D + W+++I G + H + A+
Sbjct: 281 TVNLILGTALVDMFWRCGD--IEKAIHVFEGLPETDSLSWSSIIKGLAVHGH-AHKAMHY 337
Query: 341 FQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYS 400
F M GF P D +F+ V SACS+ G +++ K R+ +V M
Sbjct: 338 FSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLG 397
Query: 401 KCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFIS 460
+ G L +A M + + G + E + M+ + + P + +
Sbjct: 398 RAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIK-VKPEHSGYYV 456
Query: 461 VLS---ACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETM 517
+LS ACA G+ ++ + +MMKEK +P ++++ G+ K + +
Sbjct: 457 LLSNIYACA--GQWDKIESLRDMMKEKLVKKPPG---WSLIEIDGKINKFTMGDD--QKH 509
Query: 518 PFDPGSI--EWAALLGACRKHG 537
P + G I +W +LG R G
Sbjct: 510 P-EMGKIRRKWEEILGKIRLIG 530
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 105/252 (41%), Gaps = 22/252 (8%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF L+K + G+ H+ ++ + Y+ N +Y+ CG + A F
Sbjct: 119 TFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQM 178
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+V S+ +++ K + ARE+FDE+P ++ +++ +I +A A+ LF+
Sbjct: 179 GFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFE 238
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNA--VLARYGGRG 195
+ G+ + + VI +C H A+ G Y V + + G
Sbjct: 239 FMKREGVVANETVMVSVISSCA---------HLGALEFGERAYEYVVKSHMTVNLILGTA 289
Query: 196 LLSEAWR---------VFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMK 246
L+ WR VF + E D +SW+++I +A+ F +M+ +G
Sbjct: 290 LVDMFWRCGDIEKAIHVFEGLPE--TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFI 347
Query: 247 IDMFTMASVLTA 258
T +VL+A
Sbjct: 348 PRDVTFTAVLSA 359
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 347 bits (889), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 211/618 (34%), Positives = 327/618 (52%), Gaps = 45/618 (7%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTN 78
F +++K C S D+ GK LHA IK L +
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIK-------------------------------LES 199
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
+ ++ + NA+I V+ + + A +F IP D++S++++IA + G A+ KE
Sbjct: 200 SSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKE 259
Query: 139 AREAGLC-LDGFTLSGVIKAC----REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGG 193
G+ + + +KAC R D G Q+H + + A ++ Y
Sbjct: 260 MLSFGVFHPNEYIFGSSLKACSSLLRPDYG--SQIHGLCIKSELAGNAIAGCSLCDMYAR 317
Query: 194 RGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMA 253
G L+ A RVF ++ D SWN +I EA+ +F +M G D ++
Sbjct: 318 CGFLNSARRVFDQIERP--DTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLR 375
Query: 254 SVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEI- 312
S+L A T L+ GMQ H +IK GF + V + L+ MY+ C+ + C +FE+
Sbjct: 376 SLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSD--LYCCFNLFEDFR 433
Query: 313 SEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLG 372
+ D V WNT+++ QHE E L F+ M + PD + + C +SS LG
Sbjct: 434 NNADSVSWNTILTACLQHEQPVE-MLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLG 492
Query: 373 KQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQ 432
QVH ++K+ + + + N L+ MY+KCG+L ARR+FD+M + VS +++I GYAQ
Sbjct: 493 SQVHCYSLKTGLAPEQF-IKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQ 551
Query: 433 HGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAK 492
G E+L LF+ M I PN++TF+ VL+AC+H G VEEG K + M+ + GI P +
Sbjct: 552 SGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKE 611
Query: 493 HFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQL 552
H SC+VDLL RAG+L EAER I+ M +P + W LL AC+ GNV LA KAA L++
Sbjct: 612 HCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKI 671
Query: 553 EPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSS 612
+P N+ +V+L +M+AS+G WE +A ++ M++ VKK PG SWI+I++K+H+F AED
Sbjct: 672 DPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIF 731
Query: 613 HPMIKEIHEYMGEMLRKM 630
HP +I+ + + +M
Sbjct: 732 HPERDDIYTVLHNIWSQM 749
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 168/587 (28%), Positives = 284/587 (48%), Gaps = 50/587 (8%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T+ +L+ C S R ++ G+ +H + + + T L+NH +Y KCG+L +AR
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAR------ 122
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
E+FD +P ++VSY ++I ++ G+ A+RL+
Sbjct: 123 -------------------------EVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYL 157
Query: 138 EAREAGLCLDGFTLSGVIKAC--REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
+ + L D F +IKAC DVGL QLH + S + NA++A Y
Sbjct: 158 KMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFN 217
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGM-KIDMFTMAS 254
+S+A RVF+ G +D ISW+++I Q EAL EM+ G+ + + S
Sbjct: 218 QMSDASRVFY--GIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGS 275
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD-CMKVFEEIS 313
L A + L G Q HG IKS N G L DMY++C G L+ +VF++I
Sbjct: 276 SLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARC---GFLNSARRVFDQIE 332
Query: 314 EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGK 373
PD WN +I+G + + +++A+ F M+ +GF PD S + A + + S G
Sbjct: 333 RPDTASWNVIIAGLANN-GYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGM 391
Query: 374 QVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH-NTVSLNSMITGYAQ 432
Q+H+ IK ++ ++V N+L+ MY+ C +L+ +F+ + ++VS N+++T Q
Sbjct: 392 QIHSYIIKWGFLAD-LTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQ 450
Query: 433 HGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAK 492
H E L+LF+LM+ + P++IT ++L C ++ G + + K G+ PE
Sbjct: 451 HEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQ-VHCYSLKTGLAPEQF 509
Query: 493 HFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVE--LAVKAANKFL 550
+ ++D+ + G L +A RI ++M + + W+ L+ + G E L + K
Sbjct: 510 IKNGLIDMYAKCGSLGQARRIFDSMD-NRDVVSWSTLIVGYAQSGFGEEALILFKEMKSA 568
Query: 551 QLEPHNAVPYVMLSNMYASAGRWEESATVKRLMR-ERGVK-KKPGCS 595
+EP N V +V + + G EE + M+ E G+ K CS
Sbjct: 569 GIEP-NHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCS 614
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 158/317 (49%), Gaps = 12/317 (3%)
Query: 245 MKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD 304
KI + T S++ A + LA G + H ++ S ++ + + ++ MY KC + D
Sbjct: 63 FKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCG--SLRD 120
Query: 305 CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACS 364
+VF+ + E +LV + ++I+G+SQ+ +E A+ + M + PD +F + AC+
Sbjct: 121 AREVFDFMPERNLVSYTSVITGYSQNGQGAE-AIRLYLKMLQEDLVPDQFAFGSIIKACA 179
Query: 365 NLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLN 424
+ S LGKQ+HA IK + S+ ++ NAL+AMY + + DA RVF +P + +S +
Sbjct: 180 SSSDVGLGKQLHAQVIKLESSSHLIA-QNALIAMYVRFNQMSDASRVFYGIPMKDLISWS 238
Query: 425 SMITGYAQHGVEGESLQLFELMMQEDIV-PNNITFISVLSACAHTGKVEEGQKYFNM-MK 482
S+I G++Q G E E+L + M+ + PN F S L AC+ + + G + + +K
Sbjct: 239 SIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIK 298
Query: 483 EKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELA 542
+ A C D+ R G L A R+ + + P + W ++ +G + A
Sbjct: 299 SELAGNAIAGCSLC--DMYARCGFLNSARRVFDQIE-RPDTASWNVIIAGLANNGYADEA 355
Query: 543 VKAANKFLQLEPHNAVP 559
V F Q+ +P
Sbjct: 356 VSV---FSQMRSSGFIP 369
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 116/205 (56%), Gaps = 8/205 (3%)
Query: 336 DALICFQDMQR-AGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNA 394
+AL F Q+ + F+ ++ + ACS+ S + G+++H + S+ + + +NN
Sbjct: 49 EALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTI-LNNH 107
Query: 395 LVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPN 454
+++MY KCG+L DAR VFD MPE N VS S+ITGY+Q+G E+++L+ M+QED+VP+
Sbjct: 108 ILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPD 167
Query: 455 NITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFS--CMVDLLGRAGKLEEAER 512
F S++ ACA + V G++ + + +E + + ++ + R ++ +A R
Sbjct: 168 QFAFGSIIKACASSSDVGLGKQ---LHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASR 224
Query: 513 IIETMPFDPGSIEWAALLGACRKHG 537
+ +P I W++++ + G
Sbjct: 225 VFYGIPM-KDLISWSSIIAGFSQLG 248
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 343 bits (879), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 192/539 (35%), Positives = 291/539 (53%), Gaps = 13/539 (2%)
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
+VF A +D VK + + A ++F+ +P D ++N +++ G A LF+E R
Sbjct: 86 DVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMR 145
Query: 141 EAGLCLDGFTLSGVIKAC--REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLS 198
+ D T+ +I++ + + L+ +H + G +V N ++ YG G L
Sbjct: 146 LNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLD 205
Query: 199 EAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTA 258
A VF + G R +SWN+M A E +A L+ M+R K D+ T ++ +
Sbjct: 206 SAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAAS 265
Query: 259 FTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSK----CAPRGMLDCMKVFEEISE 314
E L G H I G + + + I MYSK C+ R + D M +
Sbjct: 266 CQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIM------TS 319
Query: 315 PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQ 374
V W MISG+++ D+ E AL F M ++G +PD + + S C S GK
Sbjct: 320 RTCVSWTVMISGYAEKGDMDE-ALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKW 378
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHG 434
+ A A + V + NAL+ MYSKCG++H+AR +FD PE V+ +MI GYA +G
Sbjct: 379 IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNG 438
Query: 435 VEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHF 494
+ E+L+LF M+ D PN+ITF++VL ACAH+G +E+G +YF++MK+ + I P H+
Sbjct: 439 IFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHY 498
Query: 495 SCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEP 554
SCMVDLLGR GKLEEA +I M P + W ALL AC+ H NV++A +AA LEP
Sbjct: 499 SCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEP 558
Query: 555 HNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSH 613
A PYV ++N+YA+AG W+ A ++ +M++R +KK PG S IQ++ K H F + H
Sbjct: 559 QMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGH 617
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 223/491 (45%), Gaps = 16/491 (3%)
Query: 102 RELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACRE- 160
R L+ + ++N I +R + ++ LF+E + G + FT V KAC
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 161 -DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNA 219
DVG +H + + V A + + + A +VF M E RD +WNA
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPE--RDATTWNA 123
Query: 220 MIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSG 279
M+ Q +A LF EM + D T+ +++ + + + L H I+ G
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLG 183
Query: 280 FNWNPHVGSGLIDMYSKCAPRGMLDCMK-VFEEISEPD--LVLWNTMISGFSQHEDLSED 336
+ V + I Y KC G LD K VFE I D +V WN+M +S + + D
Sbjct: 184 VDVQVTVANTWISTYGKC---GDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGE-AFD 239
Query: 337 ALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALV 396
A + M R F+PD +F + ++C N + + G+ +H+ AI + + N +
Sbjct: 240 AFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQD-IEAINTFI 298
Query: 397 AMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNI 456
+MYSK + AR +FD M VS MI+GYA+ G E+L LF M++ P+ +
Sbjct: 299 SMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLV 358
Query: 457 TFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHF-SCMVDLLGRAGKLEEAERIIE 515
T +S++S C G +E G K+ + + +G + + + ++D+ + G + EA I +
Sbjct: 359 TLLSLISGCGKFGSLETG-KWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFD 417
Query: 516 TMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLE-PHNAVPYVMLSNMYASAGRWE 574
P + + W ++ +G A+K +K + L+ N + ++ + A +G E
Sbjct: 418 NTP-EKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLE 476
Query: 575 ESATVKRLMRE 585
+ +M++
Sbjct: 477 KGWEYFHIMKQ 487
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 131/323 (40%), Gaps = 44/323 (13%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF NL C + ++ G+ +H+ I N F +YSK
Sbjct: 258 TFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSE------------ 305
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
D C AR LFD + VS+ +I+ +A +G+ A+ LF
Sbjct: 306 ------------DTCS-------ARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFH 346
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYAS---VCNAVLARYGGR 194
++G D TL +I C + L A Y C +CNA++ Y
Sbjct: 347 AMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKC 406
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
G + EA +F E + ++W MI EAL LF +M+ + K + T +
Sbjct: 407 GSIHEARDIFDNTPE--KTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLA 464
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVG--SGLIDMYSKCAPRGML-DCMKVFEE 311
VL A L G ++ ++K +N +P + S ++D+ + +G L + +++
Sbjct: 465 VLQACAHSGSLEKGWEYF-HIMKQVYNISPGLDHYSCMVDLLGR---KGKLEEALELIRN 520
Query: 312 IS-EPDLVLWNTMISGFSQHEDL 333
+S +PD +W +++ H ++
Sbjct: 521 MSAKPDAGIWGALLNACKIHRNV 543
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 338 bits (868), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 198/574 (34%), Positives = 315/574 (54%), Gaps = 20/574 (3%)
Query: 168 LHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQC 227
LH + G++ N ++ Y ++ A ++F EM E + +SW ++I
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEP--NVVSWTSVISGYNDM 108
Query: 228 REGKEALVLFGEMVR-MGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHV 286
+ + AL +F +M + + +T ASV A + L + G H R+ SG N V
Sbjct: 109 GKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVV 168
Query: 287 GSGLIDMYSKC----APRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQ 342
S L+DMY KC R + D M + ++V W +MI+ ++Q+ +A+ F+
Sbjct: 169 SSSLVDMYGKCNDVETARRVFDSMIGYGR----NVVSWTSMITAYAQNAR-GHEAIELFR 223
Query: 343 DMQRA--GFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYS 400
A R + + V SACS+L GK H L + SN V V +L+ MY+
Sbjct: 224 SFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTV-VATSLLDMYA 282
Query: 401 KCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFIS 460
KCG+L A ++F + H+ +S SMI A+HG+ +++LF+ M+ I PN +T +
Sbjct: 283 KCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLG 342
Query: 461 VLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPF- 519
VL AC+H+G V EG +Y ++M EK+G+ P+++H++C+VD+LGR G+++EA + +T+
Sbjct: 343 VLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVG 402
Query: 520 -DPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESAT 578
+ G++ W ALL A R HG VE+ +A+ + +Q Y+ LSN YA +G WE+S +
Sbjct: 403 AEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSES 462
Query: 579 VKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPD 638
++ M+ G K+ CSWI+ + V+VF A D S EI ++ ++ ++MK+ G+
Sbjct: 463 LRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGS 522
Query: 639 IRWALGKDE---DVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLRICGDCHNA 695
DV E K+ + H E+LA+A+GL+ G I ++ NLR+C DCH A
Sbjct: 523 SSMITTSSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEA 582
Query: 696 IKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
KLIS I REI VRD +RFHCFK G C+C+DYW
Sbjct: 583 FKLISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 201/431 (46%), Gaps = 20/431 (4%)
Query: 73 SFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPA 132
+ +L + F+ N ++ + VK ++ AR+LFDE+ P++VS+ ++I+ + G+ A
Sbjct: 55 TLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNA 114
Query: 133 VRLFKEARE-AGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLA 189
+ +F++ E + + +T + V KAC + + +H + G V ++++
Sbjct: 115 LSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVD 174
Query: 190 RYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEM--VRMGMKI 247
YG + A RVF M R+ +SW +MI A Q G EA+ LF +
Sbjct: 175 MYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRA 234
Query: 248 DMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCM- 306
+ F +ASV++A + L L G HG + + G+ N V + L+DMY+KC G L C
Sbjct: 235 NQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKC---GSLSCAE 291
Query: 307 KVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNL 366
K+F I ++ + +MI ++H L E A+ F +M P+ + V ACS+
Sbjct: 292 KIFLRIRCHSVISYTSMIMAKAKH-GLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHS 350
Query: 367 SSPSLGKQVHALAIKSD--IPSNRVSVNNALVAMYSKCGNLHDARRVFDTM---PEHNTV 421
+ G + +L + +P +R +V M + G + +A + T+ E +
Sbjct: 351 GLVNEGLEYLSLMAEKYGVVPDSRHYT--CVVDMLGRFGRVDEAYELAKTIEVGAEQGAL 408
Query: 422 SLNSMITGYAQHG-VEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNM 480
++++ HG VE S L+ V + +I++ +A A +G E+ +
Sbjct: 409 LWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTS--AYIALSNAYAVSGGWEDSESLRLE 466
Query: 481 MKEKFGIEPEA 491
MK ++ A
Sbjct: 467 MKRSGNVKERA 477
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 334 bits (856), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 197/571 (34%), Positives = 308/571 (53%), Gaps = 20/571 (3%)
Query: 167 QLHCFAVLCGYSCYASVCNAVL--ARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVAC 224
++H ++ G + S+ N +L G LS A +F WN +I
Sbjct: 23 KIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTS-DWNYLIRGF 81
Query: 225 GQCREGKEALVLFGEMVRMGM-KIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWN 283
+++ + M+ + + D+FT L + ++ + ++ HG +I+SGF +
Sbjct: 82 SNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDD 141
Query: 284 PHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQD 343
V + L+ YS A + KVF+E+ DLV WN MI FS H L AL ++
Sbjct: 142 AIVATSLVRCYS--ANGSVEIASKVFDEMPVRDLVSWNVMICCFS-HVGLHNQALSMYKR 198
Query: 344 MQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCG 403
M G D + + S+C+++S+ ++G +H +A S V V+NAL+ MY+KCG
Sbjct: 199 MGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESC-VFVSNALIDMYAKCG 257
Query: 404 NLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLS 463
+L +A VF+ M + + ++ NSMI GY HG E++ F M+ + PN ITF+ +L
Sbjct: 258 SLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLL 317
Query: 464 ACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGS 523
C+H G V+EG ++F +M +F + P KH+ CMVDL GRAG+LE + +I
Sbjct: 318 GCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDP 377
Query: 524 IEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLM 583
+ W LLG+C+ H N+EL A K +QLE NA YV+++++Y++A + A++++L+
Sbjct: 378 VLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLI 437
Query: 584 RERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWAL 643
R ++ PG SWI+I ++VH FV +D HP I+ +GE++ + AGY P+
Sbjct: 438 RSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPE----- 492
Query: 644 GKDEDVAAEEKERRLL-----YHSEKLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKL 698
D + A R L HSEKLA+A+GL+ T G + + KNLR+C DCH+ K
Sbjct: 493 --DSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKY 550
Query: 699 ISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
+S REI VRD RFH F +G CSC DYW
Sbjct: 551 VSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 126/262 (48%), Gaps = 12/262 (4%)
Query: 98 LHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKA 157
+ +A ++FDE+P D+VS+N +I +H G H A+ ++K G+C D +TL ++ +
Sbjct: 158 VEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSS 217
Query: 158 CREDVGLVMQLHCFAVLCGYSCYAS--VCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEI 215
C L M + + C C + V NA++ Y G L A VF+ M + RD +
Sbjct: 218 CAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRK--RDVL 275
Query: 216 SWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRM 275
+WN+MI+ G G EA+ F +MV G++ + T +L + + G++ H +
Sbjct: 276 TWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVE-HFEI 334
Query: 276 IKSGFNWNPHVG--SGLIDMYSKCAPRGMLD--CMKVFEEISEPDLVLWNTMISGFSQHE 331
+ S F+ P+V ++D+Y + G L+ ++ D VLW T++ H
Sbjct: 335 MSSQFHLTPNVKHYGCMVDLYGRA---GQLENSLEMIYASSCHEDPVLWRTLLGSCKIHR 391
Query: 332 DLSEDALICFQDMQRAGFRPDD 353
+L + + +Q F D
Sbjct: 392 NLELGEVAMKKLVQLEAFNAGD 413
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 134/294 (45%), Gaps = 9/294 (3%)
Query: 76 LTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPR-PDIVSYNTLIAAHAHRGEHGPAVR 134
L ++P++F++ A L A+ LFD P +N LI ++ ++
Sbjct: 33 LQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSIL 92
Query: 135 LFKEAREAGLCL-DGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARY 191
+ + + D FT + +K+C + + +++H + G+ A V +++ Y
Sbjct: 93 FYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCY 152
Query: 192 GGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFT 251
G + A +VF EM RD +SWN MI +AL ++ M G+ D +T
Sbjct: 153 SANGSVEIASKVFDEM--PVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYT 210
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEE 311
+ ++L++ + L G+ H V + LIDMY+KC + + + VF
Sbjct: 211 LVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCG--SLENAIGVFNG 268
Query: 312 ISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSN 365
+ + D++ WN+MI G+ H E A+ F+ M +G RP+ +F + CS+
Sbjct: 269 MRKRDVLTWNSMIIGYGVHGHGVE-AISFFRKMVASGVRPNAITFLGLLLGCSH 321
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 332 bits (852), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 228/672 (33%), Positives = 330/672 (49%), Gaps = 102/672 (15%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKT-FIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
+ LL+ C S+ + + + L +K F+ ++NH +YS+ G + AR F
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 78 NNPNVFSYNAIIDACV-------------------------------KHSHLHLARELFD 106
+ N FS+N +I+ + K L +AR LF+
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFN 148
Query: 107 EIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLV- 165
+P D+V+ N+L+ + G A+RLFKE + D TL+ V+KAC E L
Sbjct: 149 AMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSA---DAITLTTVLKACAELEALKC 205
Query: 166 -MQLHCFAVLCGYSC----YASVCN---------------------------AVLARYGG 193
Q+H ++ G C +S+ N A+++ Y
Sbjct: 206 GKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYAN 265
Query: 194 RGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMA 253
G ++E+ +F C I WN+MI EALVLF EM R + D T+A
Sbjct: 266 CGRVNESRGLFDRKSNRCV--ILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLA 322
Query: 254 SVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAP-------------- 299
+V+ A L L G Q H K G + V S L+DMYSKC
Sbjct: 323 AVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESY 382
Query: 300 -----RGML----------DCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDM 344
M+ D +VFE I L+ WN+M +GFSQ+ + + L F M
Sbjct: 383 DTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQN-GCTVETLEYFHQM 441
Query: 345 QRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGN 404
+ D+ S S V SAC+++SS LG+QV A A + S++V V+++L+ +Y KCG
Sbjct: 442 HKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQV-VSSSLIDLYCKCGF 500
Query: 405 LHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSA 464
+ RRVFDTM + + V NSMI+GYA +G E++ LF+ M I P ITF+ VL+A
Sbjct: 501 VEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTA 560
Query: 465 CAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSI 524
C + G VEEG+K F MK G P+ +HFSCMVDLL RAG +EEA ++E MPFD
Sbjct: 561 CNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGS 620
Query: 525 EWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMR 584
W+++L C +G + KAA K ++LEP N+V YV LS ++A++G WE SA V++LMR
Sbjct: 621 MWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMR 680
Query: 585 ERGVKKKPGCSW 596
E V K PG SW
Sbjct: 681 ENNVTKNPGSSW 692
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 124/507 (24%), Positives = 224/507 (44%), Gaps = 55/507 (10%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T T +LK C + GK +HA + + + +++ +Y+KCG L A
Sbjct: 189 TLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQI 248
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
P+ S +A+I ++ +R LFD ++ +N++I+ + A+ LF
Sbjct: 249 REPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFN 308
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVM-----QLHCFAVLCG--------------YS 178
E R D TL+ VI AC +GL Q+HC A G YS
Sbjct: 309 EMRNETR-EDSRTLAAVINAC---IGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYS 364
Query: 179 CYAS-----------------VCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMI 221
S + N+++ Y G + +A RVF + + ISWN+M
Sbjct: 365 KCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIEN--KSLISWNSMT 422
Query: 222 VACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFN 281
Q E L F +M ++ + D +++SV++A + L G Q R G +
Sbjct: 423 NGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLD 482
Query: 282 WNPHVGSGLIDMYSKCAPRGMLD-CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALIC 340
+ V S LID+Y KC G ++ +VF+ + + D V WN+MISG++ + E A+
Sbjct: 483 SDQVVSSSLIDLYCKC---GFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFE-AIDL 538
Query: 341 FQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSD---IPSNRVSVNNALVA 397
F+ M AG RP +F V +AC+ G+++ ++K D +P + +V
Sbjct: 539 FKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFE-SMKVDHGFVPDKEHF--SCMVD 595
Query: 398 MYSKCGNLHDARRVFDTMPEHNTVSL-NSMITGYAQHGVEGESLQLFELMMQEDIVPNNI 456
+ ++ G + +A + + MP S+ +S++ G +G + + E +++ + N++
Sbjct: 596 LLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELE-PENSV 654
Query: 457 TFISVLSACAHTGKVEEGQKYFNMMKE 483
++ + + A +G E +M+E
Sbjct: 655 AYVQLSAIFATSGDWESSALVRKLMRE 681
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 331 bits (848), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 165/424 (38%), Positives = 263/424 (62%), Gaps = 9/424 (2%)
Query: 307 KVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQR-AGFRPDDCSFSCVTSACSN 365
KV S+ +++ WN MI G+ ++ E+AL ++M +P+ SF+ +AC+
Sbjct: 119 KVLRNASDQNVITWNLMIGGYVRNVQY-EEALKALKNMLSFTDIKPNKFSFASSLAACAR 177
Query: 366 LSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNS 425
L K VH+L I S I N + +++ALV +Y+KCG++ +R VF ++ ++ N+
Sbjct: 178 LGDLHHAKWVHSLMIDSGIELNAI-LSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 426 MITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKF 485
MITG+A HG+ E++++F M E + P++ITF+ +L+ C+H G +EEG++YF +M +F
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRF 296
Query: 486 GIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKA 545
I+P+ +H+ MVDLLGRAG+++EA +IE+MP +P + W +LL + R + N EL A
Sbjct: 297 SIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIA 356
Query: 546 ANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHV 605
L + YV+LSN+Y+S +WE + V+ LM + G++K G SW++ +H
Sbjct: 357 IQ---NLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHR 413
Query: 606 FVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKL 665
F A D+SH K I++ + +++K K G+V D L DV+ EEKE L YHSEKL
Sbjct: 414 FKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVL---MDVSEEEKEENLNYHSEKL 470
Query: 666 AVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSC 725
A+A+ ++ + G I + KN+R+C DCHN IK +S + R I +RD RFH F++G CSC
Sbjct: 471 ALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSC 530
Query: 726 KDYW 729
+DYW
Sbjct: 531 RDYW 534
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 131/275 (47%), Gaps = 9/275 (3%)
Query: 212 RDEISWNAMIVACGQCREGKEALVLFGEMVRM-GMKIDMFTMASVLTAFTCLEDLAGGMQ 270
++ I+WN MI + + +EAL M+ +K + F+ AS L A L DL
Sbjct: 127 QNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKW 186
Query: 271 FHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQH 330
H MI SG N + S L+D+Y+KC G +VF + D+ +WN MI+GF+ H
Sbjct: 187 VHSLMIDSGIELNAILSSALVDVYAKCGDIG--TSREVFYSVKRNDVSIWNAMITGFATH 244
Query: 331 EDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVS 390
L+ +A+ F +M+ PD +F + + CS+ GK+ L + ++
Sbjct: 245 -GLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLE 303
Query: 391 VNNALVAMYSKCGNLHDARRVFDTMP-EHNTVSLNSMITGYAQHGVEGESLQLFELMMQE 449
A+V + + G + +A + ++MP E + V S+++ + ++ +L E+ +Q
Sbjct: 304 HYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTY----KNPELGEIAIQN 359
Query: 450 DIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEK 484
+ ++ + + + T K E QK +M ++
Sbjct: 360 LSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKE 394
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 187/619 (30%), Positives = 315/619 (50%), Gaps = 41/619 (6%)
Query: 23 LKQCISQRDISTGKSLHALYI-KTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPN 81
L++C ++D +G+ +H + K F+ S +Y+KCG + A F +
Sbjct: 67 LQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSER-- 124
Query: 82 VFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEARE 141
D+ YN LI+ G A+ ++E R
Sbjct: 125 ------------------------------DVFGYNALISGFVVNGSPLDAMETYREMRA 154
Query: 142 AGLCLDGFTLSGVIKACRE-DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEA 200
G+ D +T ++K ++ V ++H A G+ V + ++ Y + +A
Sbjct: 155 NGILPDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDA 214
Query: 201 WRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFT 260
+VF E+ + D + WNA++ Q ++AL++F +M G+ + T+ SVL+AFT
Sbjct: 215 QKVFDELPDR-DDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFT 273
Query: 261 CLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLW 320
D+ G HG +K+G + V + LIDMY K + + + +FE + E DL W
Sbjct: 274 VSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGK--SKWLEEANSIFEAMDERDLFTW 331
Query: 321 NTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAI 380
N+++ D + L F+ M +G RPD + + V C L+S G+++H I
Sbjct: 332 NSVLCVHDYCGD-HDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMI 390
Query: 381 KSDIPSNRVS---VNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEG 437
S + + + S ++N+L+ MY KCG+L DAR VFD+M ++ S N MI GY
Sbjct: 391 VSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGE 450
Query: 438 ESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCM 497
+L +F M + + P+ ITF+ +L AC+H+G + EG+ + M+ + I P + H++C+
Sbjct: 451 LALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACV 510
Query: 498 VDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNA 557
+D+LGRA KLEEA + + P + W ++L +CR HGN +LA+ A + +LEP +
Sbjct: 511 IDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHC 570
Query: 558 VPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIK 617
YV++SN+Y AG++EE V+ MR++ VKK PGCSWI + N VH F + +HP K
Sbjct: 571 GGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFK 630
Query: 618 EIHEYMGEMLRKMKQAGYV 636
IH+++ ++ M Y+
Sbjct: 631 SIHDWLSLVISHMHGHEYM 649
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 131/510 (25%), Positives = 214/510 (41%), Gaps = 86/510 (16%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF +LLK + ++S K +H L K Y+ + YSK ++++
Sbjct: 163 TFPSLLKGSDAM-ELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVED-------- 213
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIP-RPDIVSYNTLIAAHAHRGEHGPAVRLF 136
A+++FDE+P R D V +N L+ ++ A+ +F
Sbjct: 214 -----------------------AQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVF 250
Query: 137 KEAREAGLCLDGFTLSGVIKA--CREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGR 194
+ RE G+ + T++ V+ A D+ +H AV G V NA++ YG
Sbjct: 251 SKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKS 310
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
L EA +F M E RD +WN+++ C + L LF M+ G++ D+ T+ +
Sbjct: 311 KWLEEANSIFEAMDE--RDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTT 368
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGF----NWNPHVGSGLIDMYSKCAPRGMLDCMKVFE 310
VL L L G + HG MI SG + N + + L+DMY KC + D VF+
Sbjct: 369 VLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGD--LRDARMVFD 426
Query: 311 EISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPS 370
+ D WN MI+G+ + E AL F M RAG +PD+ +F + ACS+ +
Sbjct: 427 SMRVKDSASWNIMINGYGV-QSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLN 485
Query: 371 LGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGY 430
G+ N L M + V++ +P + + + G
Sbjct: 486 EGR-------------------NFLAQMET----------VYNILPTSDHYACVIDMLGR 516
Query: 431 AQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPE 490
A E +EL + + I N + + S+LS+C G K ++ K E E
Sbjct: 517 ADKLEEA-----YELAISKPICDNPVVWRSILSSCR-----LHGNKDLALVAGKRLHELE 566
Query: 491 AKH---FSCMVDLLGRAGKLEEAERIIETM 517
+H + M ++ AGK EE + + M
Sbjct: 567 PEHCGGYVLMSNVYVEAGKYEEVLDVRDAM 596
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 197/613 (32%), Positives = 326/613 (53%), Gaps = 53/613 (8%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T++ L C+ G L + +KT + + N F +YS+ G SFR
Sbjct: 176 TYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSG-------SFRG- 227
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHG-PAVRLF 136
AR +FDE+ D++S+N+L++ + G G AV +F
Sbjct: 228 -----------------------ARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIF 264
Query: 137 KEAREAGLCLDGFTLSGVIKAC--REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGR 194
++ G+ LD + + VI C D+ L Q+H + GY V N +++RY
Sbjct: 265 RDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKC 324
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
G+L VFH+M E R+ +SW MI + +A+ +F M G+ + T
Sbjct: 325 GVLEAVKSVFHQMSE--RNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVTFVG 377
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISE 314
++ A C E + G++ HG IK+GF P VG+ I +Y+K + D K FE+I+
Sbjct: 378 LINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKF--EALEDAKKAFEDITF 435
Query: 315 PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSL--G 372
+++ WN MISGF+Q+ S +AL F A P++ +F V +A + S+ G
Sbjct: 436 REIISWNAMISGFAQN-GFSHEALKMFLSAA-AETMPNEYTFGSVLNAIAFAEDISVKQG 493
Query: 373 KQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQ 432
++ HA +K + S V V++AL+ MY+K GN+ ++ +VF+ M + N S+I+ Y+
Sbjct: 494 QRCHAHLLKLGLNSCPV-VSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSS 552
Query: 433 HGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAK 492
HG + LF M++E++ P+ +TF+SVL+AC G V++G + FNMM E + +EP +
Sbjct: 553 HGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHE 612
Query: 493 HFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQL 552
H+SCMVD+LGRAG+L+EAE ++ +P PG ++LG+CR HGNV++ K A +++
Sbjct: 613 HYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEM 672
Query: 553 EPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDN-----KVHVFV 607
+P + YV + N+YA W+++A +++ MR++ V K+ G SWI + + + F
Sbjct: 673 KPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFS 732
Query: 608 AEDSSHPMIKEIH 620
+ D SHP EI+
Sbjct: 733 SGDKSHPKSDEIY 745
Score = 196 bits (497), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 144/481 (29%), Positives = 242/481 (50%), Gaps = 29/481 (6%)
Query: 86 NAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLC 145
NA++ K A +F+ + PD+VS+NT+++ ++ A+ + AG+
Sbjct: 115 NAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGF---DDNQIALNFVVRMKSAGVV 171
Query: 146 LDGFTLSGVIKACREDVGLV--MQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRV 203
D FT S + C G + +QL V G V N+ + Y G A RV
Sbjct: 172 FDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRV 231
Query: 204 FHEMGEGCRDEISWNAMIVACGQ-CREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCL 262
F EM +D ISWN+++ Q G EA+V+F +M+R G+++D + SV+T
Sbjct: 232 FDEM--SFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHE 289
Query: 263 EDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMK-VFEEISEPDLVLWN 321
DL Q HG IK G+ VG+ L+ YSKC G+L+ +K VF ++SE ++V W
Sbjct: 290 TDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKC---GVLEAVKSVFHQMSERNVVSWT 346
Query: 322 TMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIK 381
TMIS +DA+ F +M+ G P++ +F + +A G ++H L IK
Sbjct: 347 TMIS------SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIK 400
Query: 382 SDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQ 441
+ S SV N+ + +Y+K L DA++ F+ + +S N+MI+G+AQ+G E+L+
Sbjct: 401 TGFVS-EPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALK 459
Query: 442 LFELMMQEDIVPNNITFISVLSACAHTG--KVEEGQK-YFNMMKEKFGIEPEAKHFSCMV 498
+F L + +PN TF SVL+A A V++GQ+ + +++ K G+ S ++
Sbjct: 460 MF-LSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLL--KLGLNSCPVVSSALL 516
Query: 499 DLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAV 558
D+ + G ++E+E++ M W +++ A HG+ E + N F ++ N
Sbjct: 517 DMYAKRGNIDESEKVFNEMS-QKNQFVWTSIISAYSSHGDFETVM---NLFHKMIKENVA 572
Query: 559 P 559
P
Sbjct: 573 P 573
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/456 (29%), Positives = 221/456 (48%), Gaps = 23/456 (5%)
Query: 95 HSHLHLARELFD-EIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLC---LDGFT 150
+S +A +LFD R S N I+ R A+ +FKE + G +D T
Sbjct: 21 YSPYRIAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVT 80
Query: 151 LSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEG 210
L +KACR D+ Q+H F+ G++ + V NAV+ Y G A +F + +
Sbjct: 81 LCLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVD- 139
Query: 211 CRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQ 270
D +SWN ++ + + AL M G+ D FT ++ L+ E G+Q
Sbjct: 140 -PDVVSWNTILSGFD---DNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQ 195
Query: 271 FHGRMIKSGFNWNPHVGSGLIDMYSKCAP-RGMLDCMKVFEEISEPDLVLWNTMISGFSQ 329
++K+G + VG+ I MYS+ RG +VF+E+S D++ WN+++SG SQ
Sbjct: 196 LQSTVVKTGLESDLVVGNSFITMYSRSGSFRG---ARRVFDEMSFKDMISWNSLLSGLSQ 252
Query: 330 HEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRV 389
+A++ F+DM R G D SF+ V + C + + L +Q+H L IK S +
Sbjct: 253 EGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYES-LL 311
Query: 390 SVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQE 449
V N L++ YSKCG L + VF M E N VS +MI+ + +++ +F M +
Sbjct: 312 EVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSN-----KDDAVSIFLNMRFD 366
Query: 450 DIVPNNITFISVLSACAHTGKVEEGQKYFNM-MKEKFGIEPEAKHFSCMVDLLGRAGKLE 508
+ PN +TF+ +++A +++EG K + +K F EP + + L + LE
Sbjct: 367 GVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGN--SFITLYAKFEALE 424
Query: 509 EAERIIETMPFDPGSIEWAALLGACRKHGNVELAVK 544
+A++ E + F I W A++ ++G A+K
Sbjct: 425 DAKKAFEDITFRE-IISWNAMISGFAQNGFSHEALK 459
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 130/492 (26%), Positives = 226/492 (45%), Gaps = 37/492 (7%)
Query: 201 WRVFHEMGEGCRDE---ISWNAMIVACGQCREGKEALVLFGEMVRMGM---KIDMFTMAS 254
+R+ H++ +G S N I + AL +F E +++G +D T+
Sbjct: 24 YRIAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCL 83
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD-CMKVFEEIS 313
L A C DL G Q HG SGF V + ++ MY K G D + +FE +
Sbjct: 84 ALKA--CRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKA---GRFDNALCIFENLV 138
Query: 314 EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGK 373
+PD+V WNT++SGF D ++ AL M+ AG D ++S S C LG
Sbjct: 139 DPDVVSWNTILSGF----DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGL 194
Query: 374 QVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQH 433
Q+ + +K+ + S+ V V N+ + MYS+ G+ ARRVFD M + +S NS+++G +Q
Sbjct: 195 QLQSTVVKTGLESDLV-VGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQE 253
Query: 434 GVEG-ESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAK 492
G G E++ +F MM+E + ++++F SV++ C H ++ ++ + ++ G E +
Sbjct: 254 GTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKR-GYESLLE 312
Query: 493 HFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQL 552
+ ++ + G LE + + M + + W ++ + + +++ +F +
Sbjct: 313 VGNILMSRYSKCGVLEAVKSVFHQMS-ERNVVSWTTMISSNKDDA---VSIFLNMRFDGV 368
Query: 553 EPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKP--GCSWIQIDNKVHVFVAED 610
P N V +V L N + +E + L + G +P G S+I + K ED
Sbjct: 369 YP-NEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEAL--ED 425
Query: 611 SSHPM----IKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLA 666
+ +EI + M+ Q G+ + AL AAE + S A
Sbjct: 426 AKKAFEDITFREIISW-NAMISGFAQNGFSHE---ALKMFLSAAAETMPNEYTFGSVLNA 481
Query: 667 VAFGL-ISTKEG 677
+AF IS K+G
Sbjct: 482 IAFAEDISVKQG 493
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 326 bits (835), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 206/629 (32%), Positives = 310/629 (49%), Gaps = 51/629 (8%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T+ L C + D+ G+ LH L + + +L N +YSKCG LD
Sbjct: 150 TYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQ-------- 201
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
A LFD D VS+N+LI+ + G + L
Sbjct: 202 -----------------------AMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLA 238
Query: 138 EAREAGLCLDGFTLSGVIKAC--REDVGLV---MQLHCFAVLCGYSCYASVCNAVLARYG 192
+ GL L + L V+KAC + G + M +HC+ G V A+L Y
Sbjct: 239 KMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYA 298
Query: 193 GRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCRE-----GKEALVLFGEMVRMGMKI 247
G L EA ++F M ++ +++NAMI Q E EA LF +M R G++
Sbjct: 299 KNGSLKEAIKLFSLMPS--KNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEP 356
Query: 248 DMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMK 307
T + VL A + + L G Q H + K+ F + +GS LI++Y+ D M+
Sbjct: 357 SPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTE--DGMQ 414
Query: 308 VFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLS 367
F S+ D+ W +MI Q+E L E A F+ + + RP++ + S + SAC++ +
Sbjct: 415 CFASTSKQDIASWTSMIDCHVQNEQL-ESAFDLFRQLFSSHIRPEEYTVSLMMSACADFA 473
Query: 368 SPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMI 427
+ S G+Q+ AIKS I + SV + ++MY+K GN+ A +VF + + + ++MI
Sbjct: 474 ALSSGEQIQGYAIKSGIDA-FTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMI 532
Query: 428 TGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGI 487
+ AQHG E+L +FE M I PN F+ VL AC H G V +G KYF MK + I
Sbjct: 533 SSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRI 592
Query: 488 EPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAAN 547
P KHF+C+VDLLGR G+L +AE +I + F + W ALL +CR + + + + A
Sbjct: 593 NPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAE 652
Query: 548 KFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFV 607
+ ++LEP + YV+L N+Y +G + V+ LMR+RGVKK+P SWI I N+ H F
Sbjct: 653 RLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFA 712
Query: 608 AEDSSHPMIKEIHEYMGEMLRKMKQAGYV 636
D SHP + I+ ML M +V
Sbjct: 713 VADLSHPSSQMIY----TMLETMDNVDFV 737
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 142/473 (30%), Positives = 236/473 (49%), Gaps = 23/473 (4%)
Query: 98 LHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKA 157
L AR+LFD +P +I+S+N+LI+ + G + A+ LF EAREA L LD FT +G +
Sbjct: 98 LGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGF 157
Query: 158 CRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEI 215
C E D+ L LH V+ G S + N ++ Y G L +A +F E RD++
Sbjct: 158 CGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE--RDQV 215
Query: 216 SWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAG----GMQF 271
SWN++I + +E L L +M R G+ + + + SVL A C+ G GM
Sbjct: 216 SWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKA-CCINLNEGFIEKGMAI 274
Query: 272 HGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHE 331
H K G ++ V + L+DMY+K + + +K+F + ++V +N MISGF Q +
Sbjct: 275 HCYTAKLGMEFDIVVRTALLDMYAKNGS--LKEAIKLFSLMPSKNVVTYNAMISGFLQMD 332
Query: 332 DL----SEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSN 387
++ S +A F DMQR G P +FS V ACS + G+Q+HAL K++ S+
Sbjct: 333 EITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSD 392
Query: 388 RVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMM 447
+ +AL+ +Y+ G+ D + F + + + S SMI + Q+ + LF +
Sbjct: 393 EF-IGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLF 451
Query: 448 QEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKL 507
I P T ++SACA + G++ K GI+ + + + ++G +
Sbjct: 452 SSHIRPEEYTVSLMMSACADFAALSSGEQ-IQGYAIKSGIDAFTSVKTSSISMYAKSGNM 510
Query: 508 EEAERI-IETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVP 559
A ++ IE +P ++A++ + +HG+ A +A N F ++ H P
Sbjct: 511 PLANQVFIEVQ--NPDVATYSAMISSLAQHGS---ANEALNIFESMKTHGIKP 558
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 129/250 (51%), Gaps = 8/250 (3%)
Query: 272 HGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHE 331
HG MIKS N ++ + L++MY KC G ++F+ + E +++ +N++ISG++Q
Sbjct: 70 HGHMIKSSLNPCLYLLNNLLNMYCKCRELGF--ARQLFDRMPERNIISFNSLISGYTQM- 126
Query: 332 DLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSV 391
E A+ F + + A + D +++ C LG+ +H L + + + S +V +
Sbjct: 127 GFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGL-SQQVFL 185
Query: 392 NNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDI 451
N L+ MYSKCG L A +FD E + VS NS+I+GY + G E L L M ++ +
Sbjct: 186 INVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGL 245
Query: 452 VPNNITFISVLSACA---HTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLE 508
SVL AC + G +E+G + K G+E + + ++D+ + G L+
Sbjct: 246 NLTTYALGSVLKACCINLNEGFIEKGMA-IHCYTAKLGMEFDIVVRTALLDMYAKNGSLK 304
Query: 509 EAERIIETMP 518
EA ++ MP
Sbjct: 305 EAIKLFSLMP 314
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 324 bits (830), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 209/621 (33%), Positives = 316/621 (50%), Gaps = 39/621 (6%)
Query: 50 STYLSNH--FTLLYSKCGTLDNARTSF----------RLTNNPNVFS------------- 84
ST+L NH +LL S CG R + + NP F
Sbjct: 38 STFLLNHVDMSLLLSICG-----REGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVV 92
Query: 85 YNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGL 144
+N+++ K L A +LFDE+P D++S N + E L K +G
Sbjct: 93 WNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG- 151
Query: 145 CLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWR 202
D TL+ V+ C E + +H A+L GY SV N ++ Y G
Sbjct: 152 GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRG 211
Query: 203 VFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCL 262
VF M R+ I+ A+I + ++ L LF M R + + T S L A +
Sbjct: 212 VFDGMSH--RNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGS 269
Query: 263 EDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNT 322
+ + G Q H + K G + S L+DMYSKC + D +FE +E D V
Sbjct: 270 QRIVEGQQIHALLWKYGIESELCIESALMDMYSKCG--SIEDAWTIFESTTEVDEVSMTV 327
Query: 323 MISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKS 382
++ G +Q+ E+A+ F M +AG D S V +S LGKQ+H+L IK
Sbjct: 328 ILVGLAQNGS-EEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKR 386
Query: 383 DIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQL 442
N VNN L+ MYSKCG+L D++ VF MP+ N VS NSMI +A+HG +L+L
Sbjct: 387 KFSGNTF-VNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKL 445
Query: 443 FELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLG 502
+E M ++ P ++TF+S+L AC+H G +++G++ N MKE GIEP +H++C++D+LG
Sbjct: 446 YEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLG 505
Query: 503 RAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVM 562
RAG L+EA+ I+++P P W ALLGAC HG+ E+ AA + Q P ++ +++
Sbjct: 506 RAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHIL 565
Query: 563 LSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEY 622
++N+Y+S G+W+E A + M+ GV K+ G S I+I++K H FV ED HP + I++
Sbjct: 566 IANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDV 625
Query: 623 MGEMLRKMKQAGYVPDIRWAL 643
+ + M GY PD R+ L
Sbjct: 626 LSGLFPVMVDEGYRPDKRFIL 646
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Query: 32 ISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAIIDA 91
+ GK LH+L IK +T+++N +YSKCG L +++T FR N S+N++I A
Sbjct: 373 LGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAA 432
Query: 92 CVKHSHLHLARELFDEIP----RPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREA 142
+H H A +L++E+ +P V++ +L+ A +H G L E +E
Sbjct: 433 FARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEV 487
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 323 bits (827), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 187/604 (30%), Positives = 318/604 (52%), Gaps = 39/604 (6%)
Query: 22 LLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPN 81
+LK C +I+ G+SLHA +KT + S Y+ + +Y + G +D +
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKS----------- 162
Query: 82 VFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEARE 141
C +F E+P + V++ +I H G + + F E
Sbjct: 163 ----------C----------RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSR 202
Query: 142 AGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSE 199
+ D +T + +KAC V +H ++ G+ V N++ Y G + +
Sbjct: 203 SEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQD 262
Query: 200 AWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAF 259
+F M E RD +SW ++IVA + + +A+ F +M + + T AS+ +A
Sbjct: 263 GLCLFENMSE--RDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSAC 320
Query: 260 TCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVL 319
L L G Q H ++ G N + V + ++ MYS C ++ +F+ + D++
Sbjct: 321 ASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCG--NLVSASVLFQGMRCRDIIS 378
Query: 320 WNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALA 379
W+T+I G+ Q E+ F M+++G +P D + + + S N++ G+QVHALA
Sbjct: 379 WSTIIGGYCQ-AGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALA 437
Query: 380 IKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGES 439
+ + N +V ++L+ MYSKCG++ +A +F + VSL +MI GYA+HG E+
Sbjct: 438 LCFGLEQNS-TVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEA 496
Query: 440 LQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVD 499
+ LFE ++ P+++TFISVL+AC H+G+++ G YFNMM+E + + P +H+ CMVD
Sbjct: 497 IDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVD 556
Query: 500 LLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVP 559
LL RAG+L +AE++I M + + W LL AC+ G++E +AA + L+L+P A
Sbjct: 557 LLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATA 616
Query: 560 YVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEI 619
V L+N+Y+S G EE+A V++ M+ +GV K+PG S I+I + V FV+ D HP ++I
Sbjct: 617 LVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDI 676
Query: 620 HEYM 623
+ +
Sbjct: 677 YNIL 680
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/483 (27%), Positives = 233/483 (48%), Gaps = 13/483 (2%)
Query: 75 RLTNNPNV-FSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAV 133
R++N V F N+ + + + +L AR++FD++P DIVS+ ++I + A+
Sbjct: 32 RISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEAL 91
Query: 134 RLFKEAR--EAGLCLDGFTLSGVIKACREDVGLVM--QLHCFAVLCGYSCYASVCNAVLA 189
LF R + + D LS V+KAC + + LH +AV V +++L
Sbjct: 92 ILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLD 151
Query: 190 RYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDM 249
Y G + ++ RVF EM R+ ++W A+I KE L F EM R D
Sbjct: 152 MYKRVGKIDKSCRVFSEM--PFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDT 209
Query: 250 FTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVF 309
+T A L A L + G H +I GF V + L MY++C M D + +F
Sbjct: 210 YTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGE--MQDGLCLF 267
Query: 310 EEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSP 369
E +SE D+V W ++I + + A+ F M+ + P++ +F+ + SAC++LS
Sbjct: 268 ENMSERDVVSWTSLIVAYKRIGQ-EVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRL 326
Query: 370 SLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITG 429
G+Q+H + + ++ +SV+N+++ MYS CGNL A +F M + +S +++I G
Sbjct: 327 VWGEQLHCNVLSLGL-NDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGG 385
Query: 430 YAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEP 489
Y Q G E + F M Q P + S+LS + +E G++ + + FG+E
Sbjct: 386 YCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQ-VHALALCFGLEQ 444
Query: 490 EAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKF 549
+ S ++++ + G ++EA I D + A++ +HG + A+ K
Sbjct: 445 NSTVRSSLINMYSKCGSIKEASMIFGETDRDD-IVSLTAMINGYAEHGKSKEAIDLFEKS 503
Query: 550 LQL 552
L++
Sbjct: 504 LKV 506
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 322 bits (824), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 204/627 (32%), Positives = 327/627 (52%), Gaps = 48/627 (7%)
Query: 49 HSTYLSNHFTLLYSKCGTLDNAR-TSFRLTNNPNV---FSYNAIIDACV--KHSHLHLAR 102
HS L N L KC L + + ++ N + F+ + +I C + +L +
Sbjct: 48 HSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSV 107
Query: 103 ELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLC---LDGFTLSGVIKACR 159
++ I P+I S+N I + + L+K+ G C D FT + K C
Sbjct: 108 KILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCA 167
Query: 160 E----DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEI 215
+ +G ++ H + + V NA + + G + A +VF E RD +
Sbjct: 168 DLRLSSLGHMILGHVLKL--RLELVSHVHNASIHMFASCGDMENARKVFDE--SPVRDLV 223
Query: 216 SWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRM 275
SWN +I + E ++A+ ++ M G+K D TM ++++ + L DL G +F+ +
Sbjct: 224 SWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYV 283
Query: 276 IKSGFNWNPHVGSGLIDMYSKC----------------------------APRGMLDC-M 306
++G + + L+DM+SKC A G+LD
Sbjct: 284 KENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSR 343
Query: 307 KVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNL 366
K+F+++ E D+VLWN MI G Q + +DAL FQ+MQ + +PD+ + SACS L
Sbjct: 344 KLFDDMEEKDVVLWNAMIGGSVQAKR-GQDALALFQEMQTSNTKPDEITMIHCLSACSQL 402
Query: 367 SSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSM 426
+ +G +H K + N V++ +LV MY+KCGN+ +A VF + N+++ ++
Sbjct: 403 GALDVGIWIHRYIEKYSLSLN-VALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAI 461
Query: 427 ITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFG 486
I G A HG ++ F M+ I P+ ITFI +LSAC H G ++ G+ YF+ MK +F
Sbjct: 462 IGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFN 521
Query: 487 IEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAA 546
+ P+ KH+S MVDLLGRAG LEEA+R++E+MP + + W ALL CR HGNVEL KAA
Sbjct: 522 LNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAA 581
Query: 547 NKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVF 606
K L+L+P ++ YV+L MY A WE++ +R+M ERGV+K PGCS I+++ V F
Sbjct: 582 KKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEF 641
Query: 607 VAEDSSHPMIKEIHEYMGEMLRKMKQA 633
+ D S P ++I++ + + R M+ +
Sbjct: 642 IVRDKSRPESEKIYDRLHCLGRHMRSS 668
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 109/450 (24%), Positives = 191/450 (42%), Gaps = 68/450 (15%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T+ L K C R S G + +K + +++ N +++ CG ++NA
Sbjct: 158 TYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENA------- 210
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
R++FDE P D+VS+N LI + GE A+ ++K
Sbjct: 211 ------------------------RKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYK 246
Query: 138 EAREAGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
G+ D T+ G++ +C D+ + + + G + NA++ + G
Sbjct: 247 LMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCG 306
Query: 196 LLSEAWRVFHEMGEGC-----------------------------RDEISWNAMIVACGQ 226
+ EA R+F + + +D + WNAMI Q
Sbjct: 307 DIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQ 366
Query: 227 CREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHV 286
+ G++AL LF EM K D TM L+A + L L G+ H + K + N +
Sbjct: 367 AKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVAL 426
Query: 287 GSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQR 346
G+ L+DMY+KC + + + VF I + + + +I G + H D S A+ F +M
Sbjct: 427 GTSLVDMYAKCG--NISEALSVFHGIQTRNSLTYTAIIGGLALHGDAST-AISYFNEMID 483
Query: 347 AGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSN-RVSVNNALVAMYSKCGNL 405
AG PD+ +F + SAC + G+ + +KS N ++ + +V + + G L
Sbjct: 484 AGIAPDEITFIGLLSACCHGGMIQTGRDYFS-QMKSRFNLNPQLKHYSIMVDLLGRAGLL 542
Query: 406 HDARRVFDTMP-EHNTVSLNSMITGYAQHG 434
+A R+ ++MP E + +++ G HG
Sbjct: 543 EEADRLMESMPMEADAAVWGALLFGCRMHG 572
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 200/584 (34%), Positives = 303/584 (51%), Gaps = 41/584 (7%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
F+ LK C +D+ GK +H +K + L+ + Y+KCG + +A
Sbjct: 144 VFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDM-YAKCGEIKSAH------ 196
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
++F++I ++V + ++IA + + LF
Sbjct: 197 -------------------------KVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFN 231
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQ--LHCFAVLCGYSCYASVCNAVLARYGGRG 195
RE + + +T +I AC + L H V G + + ++L Y G
Sbjct: 232 RMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCG 291
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
+S A RVF+E D + W AMIV EAL LF +M + +K + T+ASV
Sbjct: 292 DISNARRVFNEHSH--VDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASV 349
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEP 315
L+ +E+L G HG IK G W+ +V + L+ MY+KC D VFE SE
Sbjct: 350 LSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNR--DAKYVFEMESEK 406
Query: 316 DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQV 375
D+V WN++ISGFSQ+ + E AL F M P+ + + + SAC++L S ++G +
Sbjct: 407 DIVAWNSIISGFSQNGSIHE-ALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSL 465
Query: 376 HALAIKSD-IPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHG 434
HA ++K + S+ V V AL+ Y+KCG+ AR +FDT+ E NT++ ++MI GY + G
Sbjct: 466 HAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQG 525
Query: 435 VEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHF 494
SL+LFE M+++ PN TF S+LSAC HTG V EG+KYF+ M + + P KH+
Sbjct: 526 DTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHY 585
Query: 495 SCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEP 554
+CMVD+L RAG+LE+A IIE MP P + A L C H +L K L L P
Sbjct: 586 TCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHP 645
Query: 555 HNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQ 598
+A YV++SN+YAS GRW ++ V+ LM++RG+ K G S ++
Sbjct: 646 DDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 206 bits (525), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 152/515 (29%), Positives = 251/515 (48%), Gaps = 18/515 (3%)
Query: 59 LLYSKCGTLDNARTSFRLTNNPNVFSYNAIIDACVK----HSHLHLARELFDEIPRPDIV 114
LL SKC +D+ R S + + +I V + AR +FD+IP PD
Sbjct: 49 LLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFY 108
Query: 115 SYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACRE--DVGLVMQLHCFA 172
+ ++ + E V+L+ + G D S +KAC E D+ ++HC
Sbjct: 109 LWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQL 168
Query: 173 VLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKE 232
V S V +L Y G + A +VF+++ R+ + W +MI + +E
Sbjct: 169 VKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDI--TLRNVVCWTSMIAGYVKNDLCEE 225
Query: 233 ALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLID 292
LVLF M + + +T +++ A T L L G FHG ++KSG + + + L+D
Sbjct: 226 GLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLD 285
Query: 293 MYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPD 352
MY KC + + +VF E S DLV+W MI G++ + ++E AL FQ M+ +P+
Sbjct: 286 MYVKCGD--ISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNE-ALSLFQKMKGVEIKPN 342
Query: 353 DCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVF 412
+ + V S C + + LG+ VH L+IK I V+ NALV MY+KC DA+ VF
Sbjct: 343 CVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVA--NALVHMYAKCYQNRDAKYVF 400
Query: 413 DTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVE 472
+ E + V+ NS+I+G++Q+G E+L LF M E + PN +T S+ SACA G +
Sbjct: 401 EMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLA 460
Query: 473 EGQK-YFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLG 531
G + +K F + ++D + G + A I +T+ + +I W+A++G
Sbjct: 461 VGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIE-EKNTITWSAMIG 519
Query: 532 ACRKHGNVELAVKAANKFL--QLEPHNAVPYVMLS 564
K G+ +++ + L Q +P+ + +LS
Sbjct: 520 GYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILS 554
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 192/546 (35%), Positives = 296/546 (54%), Gaps = 26/546 (4%)
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
G LS A ++F + + ++ WNA+I A + M++
Sbjct: 51 GDLSFAVQIFRYIPKPLTND--WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVD 108
Query: 255 VLTAFTCLEDLAGGM------QFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKV 308
LT L+ A + Q H ++ + G + + + + L+D YSK ++ K+
Sbjct: 109 ALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGD--LISAYKL 166
Query: 309 FEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSS 368
F+E+ D+ WN +I+G SE A+ ++ M+ G R + + ACS+L
Sbjct: 167 FDEMPVRDVASWNALIAGLVSGNRASE-AMELYKRMETEGIRRSEVTVVAALGACSHLGD 225
Query: 369 PSLGKQV-HALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP-EHNTVSLNSM 426
G+ + H + ++ V V+NA + MYSKCG + A +VF+ + + V+ N+M
Sbjct: 226 VKEGENIFHGYS------NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTM 279
Query: 427 ITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFG 486
ITG+A HG +L++F+ + I P+++++++ L+AC H G VE G FN M K G
Sbjct: 280 ITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-G 338
Query: 487 IEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAA 546
+E KH+ C+VDLL RAG+L EA II +M P + W +LLGA + +VE+A A+
Sbjct: 339 VERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIAS 398
Query: 547 NKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVF 606
+ ++ +N +V+LSN+YA+ GRW++ V+ M + VKK PG S+I+ +H F
Sbjct: 399 REIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEF 458
Query: 607 VAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLA 666
D SH +EI+E + E+ K+++ GYV L D+ EEKE L YHSEKLA
Sbjct: 459 YNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVL---HDIGEEEKENALCYHSEKLA 515
Query: 667 VAFGLI---STKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHC 723
VA+GL+ E P+ V+ NLRICGDCH K IS I REI VRD RFH FK+G C
Sbjct: 516 VAYGLMMMDGADEESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSC 575
Query: 724 SCKDYW 729
SC+D+W
Sbjct: 576 SCRDFW 581
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 117/269 (43%), Gaps = 9/269 (3%)
Query: 86 NAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLC 145
++DA K+ L A +LFDE+P D+ S+N LIA A+ L+K G+
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIR 207
Query: 146 LDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSC-YASVCNAVLARYGGRGLLSEAWRVF 204
T+ + AC +G V + + GYS V NA + Y G + +A++VF
Sbjct: 208 RSEVTVVAALGACSH-LGDVKEGE--NIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVF 264
Query: 205 HEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLED 264
+ G + ++WN MI E AL +F ++ G+K D + + LTA
Sbjct: 265 EQF-TGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGL 323
Query: 265 LAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAP-RGMLDCMKVFEEISEPDLVLWNTM 323
+ G+ M G N ++D+ S+ R D + I PD VLW ++
Sbjct: 324 VEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMI--PDPVLWQSL 381
Query: 324 ISGFSQHEDLSEDALICFQDMQRAGFRPD 352
+ + D+ E A I ++++ G D
Sbjct: 382 LGASEIYSDV-EMAEIASREIKEMGVNND 409
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 316 bits (809), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 202/619 (32%), Positives = 308/619 (49%), Gaps = 54/619 (8%)
Query: 117 NTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACREDVG---LVMQLHCFAV 173
N LI +VR F G+ D T V+K+ +G L LH +
Sbjct: 95 NALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKS-NSKLGFRWLGRALHAATL 153
Query: 174 LCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDE--ISWNAMIVACGQCREGK 231
C + V +++ Y G L A++VF E + + E + WN +I G CR
Sbjct: 154 KNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLI--NGYCR--- 208
Query: 232 EALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLI 291
A M + +S N S LI
Sbjct: 209 ----------------------------------AKDMHMATTLFRSMPERNSGSWSTLI 234
Query: 292 DMYSKCAPRGMLDCMK-VFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFR 350
Y G L+ K +FE + E ++V W T+I+GFSQ D E A+ + +M G +
Sbjct: 235 KGY---VDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDY-ETAISTYFEMLEKGLK 290
Query: 351 PDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARR 410
P++ + + V SACS + G ++H + + I +R ++ ALV MY+KCG L A
Sbjct: 291 PNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDR-AIGTALVDMYAKCGELDCAAT 349
Query: 411 VFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGK 470
VF M + +S +MI G+A HG +++Q F MM P+ + F++VL+AC ++ +
Sbjct: 350 VFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSE 409
Query: 471 VEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALL 530
V+ G +F+ M+ + IEP KH+ +VDLLGRAGKL EA ++E MP +P WAAL
Sbjct: 410 VDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALY 469
Query: 531 GACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKK 590
AC+ H A + L+L+P Y+ L +AS G ++ + +++R ++
Sbjct: 470 RACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKER 529
Query: 591 KPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVA 650
G S+I++D +++ F A D SH + +EI + E++ Q GY P W++ D+
Sbjct: 530 SLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSI---HDIE 586
Query: 651 AEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVR 710
EEKE HSEKLA+ G + T G I ++KNLRICGDCH+ +K +S IS R+I +R
Sbjct: 587 EEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLR 646
Query: 711 DAHRFHCFKEGHCSCKDYW 729
DA +FH FK+G CSC DYW
Sbjct: 647 DARQFHHFKDGRCSCGDYW 665
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 149/337 (44%), Gaps = 49/337 (14%)
Query: 212 RDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQF 271
R+ NA+I + + ++ F M+R+G+K D T VL + + L G
Sbjct: 89 RNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRAL 148
Query: 272 HGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEE----ISEPDLVLWNTMISGF 327
H +K+ + + V L+DMY+K + +VFEE I + +++WN +I+G+
Sbjct: 149 HAATLKNFVDCDSFVRLSLVDMYAKTGQ--LKHAFQVFEESPDRIKKESILIWNVLINGY 206
Query: 328 SQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSN 387
+ +D+ A F+ M P+ S S T
Sbjct: 207 CRAKDMHM-ATTLFRSM------PERNSGSWST--------------------------- 232
Query: 388 RVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMM 447
L+ Y G L+ A+++F+ MPE N VS ++I G++Q G ++ + M+
Sbjct: 233 -------LIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEML 285
Query: 448 QEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKL 507
++ + PN T +VLSAC+ +G + G + + + GI+ + + +VD+ + G+L
Sbjct: 286 EKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDN-GIKLDRAIGTALVDMYAKCGEL 344
Query: 508 EEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVK 544
+ A + M + W A++ HG A++
Sbjct: 345 DCAATVFSNMN-HKDILSWTAMIQGWAVHGRFHQAIQ 380
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 120/278 (43%), Gaps = 39/278 (14%)
Query: 35 GKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNA------------------------ 70
G++LHA +K F+ +++ +Y+K G L +A
Sbjct: 145 GRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLIN 204
Query: 71 -----------RTSFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTL 119
T FR N S++ +I V L+ A++LF+ +P ++VS+ TL
Sbjct: 205 GYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTL 264
Query: 120 IAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACRED--VGLVMQLHCFAVLCGY 177
I + G++ A+ + E E GL + +T++ V+ AC + +G +++H + + G
Sbjct: 265 INGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGI 324
Query: 178 SCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLF 237
++ A++ Y G L A VF M +D +SW AMI +A+ F
Sbjct: 325 KLDRAIGTALVDMYAKCGELDCAATVFSNMNH--KDILSWTAMIQGWAVHGRFHQAIQCF 382
Query: 238 GEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRM 275
+M+ G K D +VLTA ++ G+ F M
Sbjct: 383 RQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSM 420
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 112/255 (43%), Gaps = 19/255 (7%)
Query: 351 PDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARR 410
PD+ F + AC + +S + VHA ++ + S+RV+ LV+ S + +
Sbjct: 27 PDESHFISLIHACKDTASL---RHVHAQILRRGVLSSRVAAQ--LVSCSSLLKSPDYSLS 81
Query: 411 VFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGK 470
+F E N LN++I G ++ S++ F LM++ + P+ +TF VL + + G
Sbjct: 82 IFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGF 141
Query: 471 VEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMP---FDPGSIEWA 527
G+ + F ++ ++ +VD+ + G+L+ A ++ E P + W
Sbjct: 142 RWLGRALHAATLKNF-VDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWN 200
Query: 528 ALL-GACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRER 586
L+ G CR ++ +A F + N+ + L Y +G + + LM E+
Sbjct: 201 VLINGYCRAK-DMHMATTL---FRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEK 256
Query: 587 GVKKKPGCSWIQIDN 601
V SW + N
Sbjct: 257 NV-----VSWTTLIN 266
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 314 bits (804), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 180/514 (35%), Positives = 288/514 (56%), Gaps = 12/514 (2%)
Query: 87 AIIDACVKHSHLHLARELF---DEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAG 143
A+I K + L+ ++F D+I R +IV N +I + + + G A+RLF + G
Sbjct: 391 ALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEG 448
Query: 144 LCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRV 203
L D F++ ++ + + + L Q+H + + G +V +++ Y G L E++++
Sbjct: 449 LRTDEFSVCSLL-SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKL 507
Query: 204 FHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLE 263
F G +D W +MI + +EA+ LF EM+ G D T+A+VLT +
Sbjct: 508 FQ--GIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHP 565
Query: 264 DLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTM 323
L G + HG +++G + +GS L++MYSKC + +V++ + E D V +++
Sbjct: 566 SLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKL--ARQVYDRLPELDPVSCSSL 623
Query: 324 ISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSD 383
ISG+SQH L +D + F+DM +GF D + S + A + SLG QVHA K
Sbjct: 624 ISGYSQH-GLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIG 682
Query: 384 IPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLF 443
+ SV ++L+ MYSK G++ D + F + + ++ ++I YAQHG E+LQ++
Sbjct: 683 L-CTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVY 741
Query: 444 ELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGR 503
LM ++ P+ +TF+ VLSAC+H G VEE + N M + +GIEPE +H+ CMVD LGR
Sbjct: 742 NLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGR 801
Query: 504 AGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVML 563
+G+L EAE I M P ++ W LL AC+ HG VEL AA K ++LEP +A Y+ L
Sbjct: 802 SGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISL 861
Query: 564 SNMYASAGRWEESATVKRLMRERGVKKKPGCSWI 597
SN+ A G W+E ++LM+ GV+K+PG S +
Sbjct: 862 SNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 225 bits (574), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 154/532 (28%), Positives = 264/532 (49%), Gaps = 44/532 (8%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T++++L C S + GK + A IK CG D
Sbjct: 253 TYSSVLAACASLEKLRFGKVVQARVIK-------------------CGAED--------- 284
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
VF AI+D K H+ A E+F IP P +VS+ +++ + + A+ +FK
Sbjct: 285 ----VFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFK 340
Query: 138 EAREAGLCLDGFTLSGVIKACRED--VGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
E R +G+ ++ T++ VI AC V Q+H + G+ +SV A+++ Y G
Sbjct: 341 EMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSG 400
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
+ + +VF ++ + R I N MI + Q ++ +A+ LF M++ G++ D F++ S+
Sbjct: 401 DIDLSEQVFEDLDDIQRQNIV-NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSL 459
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEP 315
L+ CL G Q HG +KSG + VGS L +YSKC + + K+F+ I
Sbjct: 460 LSVLDCLN---LGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCG--SLEESYKLFQGIPFK 514
Query: 316 DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQV 375
D W +MISGF+++ L E A+ F +M G PD+ + + V + CS+ S GK++
Sbjct: 515 DNACWASMISGFNEYGYLRE-AIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEI 573
Query: 376 HALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGV 435
H +++ I + + +ALV MYSKCG+L AR+V+D +PE + VS +S+I+GY+QHG+
Sbjct: 574 HGYTLRAGIDKG-MDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGL 632
Query: 436 EGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFS 495
+ LF M+ ++ S+L A A + + G + + K G+ E S
Sbjct: 633 IQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYIT-KIGLCTEPSVGS 691
Query: 496 CMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAAN 547
++ + + G +++ + + P I W AL+ + +HG A++ N
Sbjct: 692 SLLTMYSKFGSIDDCCKAFSQIN-GPDLIAWTALIASYAQHGKANEALQVYN 742
Score = 176 bits (447), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 135/455 (29%), Positives = 221/455 (48%), Gaps = 33/455 (7%)
Query: 101 ARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACRE 160
A +LFD IP+PD+VS N +I+ + ++R F + G + + VI AC
Sbjct: 103 AAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSA 162
Query: 161 -DVGLVMQLH-CFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEIS-- 216
L +L C + GY Y V +A++ + +A++VF RD +S
Sbjct: 163 LQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVF-------RDSLSAN 215
Query: 217 ---WNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHG 273
WN +I + + LF EM K D +T +SVL A LE L G
Sbjct: 216 VYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQA 275
Query: 274 RMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDL 333
R+IK G + V + ++D+Y+KC M + M+VF I P +V W M+SG+++ D
Sbjct: 276 RVIKCGAE-DVFVCTAIVDLYAKCGH--MAEAMEVFSRIPNPSVVSWTVMLSGYTKSND- 331
Query: 334 SEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNN 393
+ AL F++M+ +G ++C+ + V SAC S QVHA KS + SV
Sbjct: 332 AFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDS-SVAA 390
Query: 394 ALVAMYSKCGNLHDARRVF---DTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQED 450
AL++MYSK G++ + +VF D + N V N MIT ++Q G++++LF M+QE
Sbjct: 391 ALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEG 448
Query: 451 IVPNNITFISVLSA--CAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLE 508
+ + + S+LS C + GK G K G+ + S + L + G LE
Sbjct: 449 LRTDEFSVCSLLSVLDCLNLGKQVHGYTL------KSGLVLDLTVGSSLFTLYSKCGSLE 502
Query: 509 EAERIIETMPFDPGSIEWAALLGACRKHGNVELAV 543
E+ ++ + +PF + WA+++ ++G + A+
Sbjct: 503 ESYKLFQGIPFKDNAC-WASMISGFNEYGYLREAI 536
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 226/463 (48%), Gaps = 25/463 (5%)
Query: 86 NAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLC 145
+A+ID K+ A ++F + ++ +NT+IA +G LF E
Sbjct: 189 SALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQK 248
Query: 146 LDGFTLSGVIKAC----REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAW 201
D +T S V+ AC + G V+Q + CG VC A++ Y G ++EA
Sbjct: 249 PDSYTYSSVLAACASLEKLRFGKVVQAR--VIKCGAE-DVFVCTAIVDLYAKCGHMAEAM 305
Query: 202 RVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTC 261
VF + +SW M+ + + AL +F EM G++I+ T+ SV++A
Sbjct: 306 EVFSRIPN--PSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGR 363
Query: 262 LEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFE---EISEPDLV 318
+ Q H + KSGF + V + LI MYSK + + +VFE +I ++V
Sbjct: 364 PSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSE--QVFEDLDDIQRQNIV 421
Query: 319 LWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHAL 378
N MI+ FSQ + + A+ F M + G R D+ S V S S L +LGKQVH
Sbjct: 422 --NVMITSFSQSKKPGK-AIRLFTRMLQEGLRTDEFS---VCSLLSVLDCLNLGKQVHGY 475
Query: 379 AIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGE 438
+KS + + ++V ++L +YSKCG+L ++ ++F +P + SMI+G+ ++G E
Sbjct: 476 TLKSGLVLD-LTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLRE 534
Query: 439 SLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMV 498
++ LF M+ + P+ T +VL+ C+ + G K + + GI+ S +V
Sbjct: 535 AIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRG-KEIHGYTLRAGIDKGMDLGSALV 593
Query: 499 DLLGRAGKLEEAERIIETMP-FDPGSIEWAALLGACRKHGNVE 540
++ + G L+ A ++ + +P DP + ++L+ +HG ++
Sbjct: 594 NMYSKCGSLKLARQVYDRLPELDP--VSCSSLISGYSQHGLIQ 634
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 168/336 (50%), Gaps = 10/336 (2%)
Query: 183 VCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVR 242
+ ++L+ Y G +++A ++F + + D +S N MI Q R +E+L F +M
Sbjct: 86 LTKSLLSWYSNSGSMADAAKLFDTIPQ--PDVVSCNIMISGYKQHRLFEESLRFFSKMHF 143
Query: 243 MGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGM 302
+G + + + SV++A + L+ IK G+ + V S LID++SK
Sbjct: 144 LGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSK--NLRF 201
Query: 303 LDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSA 362
D KVF + ++ WNT+I+G ++++ F +M +PD ++S V +A
Sbjct: 202 EDAYKVFRDSLSANVYCWNTIIAGALRNQNYGA-VFDLFHEMCVGFQKPDSYTYSSVLAA 260
Query: 363 CSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVS 422
C++L GK V A IK + V V A+V +Y+KCG++ +A VF +P + VS
Sbjct: 261 CASLEKLRFGKVVQARVIKCG--AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVS 318
Query: 423 LNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKV-EEGQKYFNMM 481
M++GY + +L++F+ M + NN T SV+SAC V E Q + +
Sbjct: 319 WTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVF 378
Query: 482 KEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETM 517
K F ++ + ++ + ++G ++ +E++ E +
Sbjct: 379 KSGFYLDSSVA--AALISMYSKSGDIDLSEQVFEDL 412
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%)
Query: 389 VSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQ 448
V + +L++ YS G++ DA ++FDT+P+ + VS N MI+GY QH + ESL+ F M
Sbjct: 84 VFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHF 143
Query: 449 EDIVPNNITFISVLSACA 466
N I++ SV+SAC+
Sbjct: 144 LGFEANEISYGSVISACS 161
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 313 bits (801), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 178/529 (33%), Positives = 290/529 (54%), Gaps = 12/529 (2%)
Query: 92 CVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRG---EHGPAVRLFKEAREAGLCLDG 148
C + AR L ++ I +++LI H G + ++ R G+
Sbjct: 46 CTAATQFRYARRLLCQLQTLSIQLWDSLIG-HFSGGITLNRRLSFLAYRHMRRNGVIPSR 104
Query: 149 FTLSGVIKAC-REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEM 207
T ++KA + Q H V G V N++++ Y GL A R+F
Sbjct: 105 HTFPPLLKAVFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFD-- 162
Query: 208 GEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAG 267
G +D ++W AMI + EA+V F EM + G+ + T+ SVL A +ED+
Sbjct: 163 GAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRF 222
Query: 268 GMQFHGRMIKSG-FNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISG 326
G HG +++G + +GS L+DMY KC+ D KVF+E+ ++V W +I+G
Sbjct: 223 GRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYD--DAQKVFDEMPSRNVVTWTALIAG 280
Query: 327 FSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPS 386
+ Q + L+ F++M ++ P++ + S V SAC+++ + G++VH IK+ I
Sbjct: 281 YVQSRCFDKGMLV-FEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEI 339
Query: 387 NRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELM 446
N + L+ +Y KCG L +A VF+ + E N + +MI G+A HG ++ LF M
Sbjct: 340 N-TTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTM 398
Query: 447 MQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGK 506
+ + PN +TF++VLSACAH G VEEG++ F MK +F +EP+A H++CMVDL GR G
Sbjct: 399 LSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGL 458
Query: 507 LEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNM 566
LEEA+ +IE MP +P ++ W AL G+C H + EL AA++ ++L+P ++ Y +L+N+
Sbjct: 459 LEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANL 518
Query: 567 YASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPM 615
Y+ + W+E A V++ M+++ V K PG SWI++ K+ F+A D P+
Sbjct: 519 YSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPL 567
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 168/351 (47%), Gaps = 12/351 (3%)
Query: 74 FRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAV 133
F L ++P F N++I A LFD D+V++ +I G A+
Sbjct: 132 FGLDSDP--FVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAM 189
Query: 134 RLFKEAREAGLCLDGFTLSGVIKAC--REDVGLVMQLHCFAVLCG-YSCYASVCNAVLAR 190
F E ++ G+ + T+ V+KA EDV +H + G C + ++++
Sbjct: 190 VYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDM 249
Query: 191 YGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMF 250
YG +A +VF EM R+ ++W A+I Q R + +++F EM++ + +
Sbjct: 250 YGKCSCYDDAQKVFDEMPS--RNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEK 307
Query: 251 TMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFE 310
T++SVL+A + L G + H MIK+ N G+ LID+Y KC + + + VFE
Sbjct: 308 TLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCG--CLEEAILVFE 365
Query: 311 EISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPS 370
+ E ++ W MI+GF+ H + DA F M + P++ +F V SAC++
Sbjct: 366 RLHEKNVYTWTAMINGFAAH-GYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVE 424
Query: 371 LGKQVHALAIKSDIPSNRVSVNNA-LVAMYSKCGNLHDARRVFDTMPEHNT 420
G+++ L++K + + A +V ++ + G L +A+ + + MP T
Sbjct: 425 EGRRLF-LSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPT 474
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 138/327 (42%), Gaps = 54/327 (16%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKT-FIPHSTYLSNHFTLLYSKCGTLDNARTSFRL 76
T ++LK D+ G+S+H LY++T + ++ + +Y KC D+A+
Sbjct: 206 TVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQ----- 260
Query: 77 TNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLF 136
++FDE+P ++V++ LIA + + +F
Sbjct: 261 --------------------------KVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVF 294
Query: 137 KEAREAGLCLDGFTLSGVIKACREDVGLV---MQLHCFAVLCGYSCYASVCNAVLARYGG 193
+E ++ + + TLS V+ AC VG + ++HC+ + + ++ Y
Sbjct: 295 EEMLKSDVAPNEKTLSSVLSACAH-VGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVK 353
Query: 194 RGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMA 253
G L EA VF + E ++ +W AMI ++A LF M+ + + T
Sbjct: 354 CGCLEEAILVFERLHE--KNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFM 411
Query: 254 SVLTAFTCLEDLAGGMQFHGRMI----KSGFNWNPHVG--SGLIDMYSKCAPRGMLDCMK 307
+VL+A C GG+ GR + K FN P + ++D++ + +G+L+ K
Sbjct: 412 AVLSA--CAH---GGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGR---KGLLEEAK 463
Query: 308 VFEE--ISEPDLVLWNTMISGFSQHED 332
E EP V+W + H+D
Sbjct: 464 ALIERMPMEPTNVVWGALFGSCLLHKD 490
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 312 bits (799), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 209/634 (32%), Positives = 318/634 (50%), Gaps = 72/634 (11%)
Query: 23 LKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNV 82
L C S D++ G+ +H +K+ + + Y+ N +Y+KC L +A + FR +
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 83 FSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREA 142
S+N ++D V+ L A +LFD +P VSY TLI +A + A+ LF+E R
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL 167
Query: 143 GLCLDGFTLSGVIKACREDVGL------------------------VMQLHCFAVLCGYS 178
G+ L+ TL+ VI AC G+ ++ ++C LC
Sbjct: 168 GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLC-LCLKD 226
Query: 179 CYA----------SVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCR 228
N +L Y GL+ +A +F ++ E +D +SW MI C +
Sbjct: 227 ARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITE--KDIVSWGTMIDGCLRKN 284
Query: 229 EGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGS 288
+ EALV + EM+R GMK M +L+A + G+Q HG ++K GF+ + +
Sbjct: 285 QLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQA 344
Query: 289 GLIDMYS------------------KCAPR----------GMLD-CMKVFEEISEPDLVL 319
+I Y+ A R GM++ +VF++ + D+
Sbjct: 345 TIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFS 404
Query: 320 WNTMISGFSQHEDLSEDALICFQDM-QRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHAL 378
WN MISG++Q + AL F++M + +PD + V SA S+L S GK+ H
Sbjct: 405 WNAMISGYAQSLS-PQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDY 463
Query: 379 AIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSL---NSMITGYAQHGV 435
S IP N ++ A++ MY+KCG++ A +F ++ ++ N++I G A HG
Sbjct: 464 LNFSTIPPND-NLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGH 522
Query: 436 EGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFS 495
+L L+ + I PN+ITF+ VLSAC H G VE G+ YF MK GIEP+ KH+
Sbjct: 523 AKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYG 582
Query: 496 CMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPH 555
CMVDLLG+AG+LEEA+ +I+ MP + W LL A R HGNVE+A AA + ++P
Sbjct: 583 CMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPS 642
Query: 556 NAVPYVMLSNMYASAGRWEESATVKRLMRERGVK 589
+ VMLSN+YA AGRWE+ A V+ MR R V+
Sbjct: 643 HGGCKVMLSNVYADAGRWEDVALVREEMRTRDVE 676
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 199/455 (43%), Gaps = 43/455 (9%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T ++ C I + L +L IK + ++S + +Y C L +AR F
Sbjct: 175 TLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEM 234
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
N+ ++N +++ K + A ELFD+I DIVS+ T+I + + A+ +
Sbjct: 235 PERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYT 294
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLV--MQLHCFAVLCGYSCY--------------- 180
E G+ + ++ A VG +QLH V G+ CY
Sbjct: 295 EMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSN 354
Query: 181 ----------ASVC------NAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVAC 224
ASV NA++A + G++ +A VF + + +D SWNAMI
Sbjct: 355 DIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHD--KDIFSWNAMISGY 412
Query: 225 GQCREGKEALVLFGEMVRMG-MKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWN 283
Q + AL LF EM+ +K D TM SV +A + L L G + H + S N
Sbjct: 413 AQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPN 472
Query: 284 PHVGSGLIDMYSKCAP-RGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQ 342
++ + +IDMY+KC L+ + IS + WN +I G + H ++ AL +
Sbjct: 473 DNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGH-AKLALDLYS 531
Query: 343 DMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSD--IPSNRVSVNNALVAMYS 400
D+Q +P+ +F V SAC + LGK + ++KSD I + + +V +
Sbjct: 532 DLQSLPIKPNSITFVGVLSACCHAGLVELGK-TYFESMKSDHGIEPD-IKHYGCMVDLLG 589
Query: 401 KCGNLHDARRVFDTMPEHNTVSLNSMITGYAQ-HG 434
K G L +A+ + MP V + M+ ++ HG
Sbjct: 590 KAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHG 624
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 146/284 (51%), Gaps = 39/284 (13%)
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCA------------- 298
+ S L + D+ G Q H R++KSG + N ++ + +++MY+KC
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103
Query: 299 ----------------PRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQ 342
R + D +K+F+ + E V + T+I G++Q+ SE A+ F+
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSE-AMELFR 162
Query: 343 DMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKC 402
+M+ G ++ + + V SACS+L + + +LAIK + RV V+ L+ MY C
Sbjct: 163 EMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLE-GRVFVSTNLLHMYCLC 221
Query: 403 GNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVL 462
L DAR++FD MPE N V+ N M+ GY++ G+ ++ +LF+ + ++DIV ++ +++
Sbjct: 222 LCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIV----SWGTMI 277
Query: 463 SACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGK 506
C +++E Y+ M + G++P MVDLL + +
Sbjct: 278 DGCLRKNQLDEALVYYTEML-RCGMKPSE---VMMVDLLSASAR 317
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 311 bits (798), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 198/561 (35%), Positives = 299/561 (53%), Gaps = 15/561 (2%)
Query: 53 LSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPD 112
L F L KC +++ R +V N +I V+ + + LF P+
Sbjct: 36 LERDFLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPN 95
Query: 113 IVSYNTLIAAHAHR-GEHGPAVRLFKEAREAGLCLDGFTLSGVIKACR--EDVGLVMQLH 169
S+N +I + +H A+ L++ + +GL D FT + V AC E++G+ +H
Sbjct: 96 HYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVH 155
Query: 170 CFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCRE 229
G + ++++ Y G + A ++F E+ E RD +SWN+MI +
Sbjct: 156 SSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITE--RDTVSWNSMISGYSEAGY 213
Query: 230 GKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSG 289
K+A+ LF +M G + D T+ S+L A + L DL G I + +GS
Sbjct: 214 AKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSK 273
Query: 290 LIDMYSKCAPRGMLD-CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAG 348
LI MY KC G LD +VF ++ + D V W MI+ +SQ+ SE A F +M++ G
Sbjct: 274 LISMYGKC---GDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSE-AFKLFFEMEKTG 329
Query: 349 FRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDA 408
PD + S V SAC ++ + LGKQ+ A + + N + V LV MY KCG + +A
Sbjct: 330 VSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHN-IYVATGLVDMYGKCGRVEEA 388
Query: 409 RRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHT 468
RVF+ MP N + N+MIT YA G E+L LF+ M + P++ITFI VLSAC H
Sbjct: 389 LRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHA 445
Query: 469 GKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAA 528
G V +G +YF+ M FG+ P+ +H++ ++DLL RAG L+EA +E P P I AA
Sbjct: 446 GLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAA 505
Query: 529 LLGACRKHGNVELAVKAANKFLQL-EPHNAVPYVMLSNMYASAGRWEESATVKRLMRERG 587
+LGAC K +V + KA +++ E NA YV+ SN+ A W+ESA ++ LMR+RG
Sbjct: 506 ILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRG 565
Query: 588 VKKKPGCSWIQIDNKVHVFVA 608
V K PGCSWI+I+ ++ F+A
Sbjct: 566 VVKTPGCSWIEIEGELMEFLA 586
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 150/340 (44%), Gaps = 52/340 (15%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T ++L C D+ TG+ L + I I ST+L + +Y KCG LD+
Sbjct: 235 TLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDS-------- 286
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
AR +F+++ + D V++ +I ++ G+ A +LF
Sbjct: 287 -----------------------ARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFF 323
Query: 138 EAREAGLCLDGFTLSGVIKACRE----DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGG 193
E + G+ D TLS V+ AC ++G ++ H + ++ Y V ++ YG
Sbjct: 324 EMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIY--VATGLVDMYGK 381
Query: 194 RGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMA 253
G + EA RVF M ++E +WNAMI A KEAL+LF RM + T
Sbjct: 382 CGRVEEALRVFEAM--PVKNEATWNAMITAYAHQGHAKEALLLFD---RMSVPPSDITFI 436
Query: 254 SVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVG--SGLIDMYSKCAPRGMLDCMKVFEE 311
VL+A + G ++ M S F P + + +ID+ S+ GMLD F E
Sbjct: 437 GVLSACVHAGLVHQGCRYFHEM-SSMFGLVPKIEHYTNIIDLLSRA---GMLDEAWEFME 492
Query: 312 --ISEPDLVLWNTMISGFSQHEDLS--EDALICFQDMQRA 347
+PD ++ ++ + +D++ E A+ +M+ A
Sbjct: 493 RFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEA 532
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 159/379 (41%), Positives = 242/379 (63%), Gaps = 6/379 (1%)
Query: 242 RMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRG 301
R G D + ++S + + D G FH +K GF + ++GS L+ +Y
Sbjct: 113 RDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGE-- 170
Query: 302 MLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTS 361
+ + KVFEE+ E ++V W MISGF+Q E + L + M+++ P+D +F+ + S
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQ-EWRVDICLKLYSKMRKSTSDPNDYTFTALLS 229
Query: 362 ACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTV 421
AC+ + G+ VH + + S + ++N+L++MY KCG+L DA R+FD + V
Sbjct: 230 ACTGSGALGQGRSVHCQTLHMGLKS-YLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVV 288
Query: 422 SLNSMITGYAQHGVEGESLQLFELMM-QEDIVPNNITFISVLSACAHTGKVEEGQKYFNM 480
S NSMI GYAQHG+ ++++LFELMM + P+ IT++ VLS+C H G V+EG+K+FN+
Sbjct: 289 SWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNL 348
Query: 481 MKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVE 540
M E G++PE H+SC+VDLLGR G L+EA +IE MP P S+ W +LL +CR HG+V
Sbjct: 349 MAEH-GLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVW 407
Query: 541 LAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQID 600
++AA + L LEP A +V L+N+YAS G W+E+ATV++LM+++G+K PGCSWI+I+
Sbjct: 408 TGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEIN 467
Query: 601 NKVHVFVAEDSSHPMIKEI 619
N V +F AED S+ + EI
Sbjct: 468 NYVFMFKAEDGSNCRMLEI 486
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 165/351 (47%), Gaps = 15/351 (4%)
Query: 140 REAGLCLDGFTLSGVIKAC--REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLL 197
+ G D + LS +++C D HC A+ G+ + ++++ Y G +
Sbjct: 112 KRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEV 171
Query: 198 SEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLT 257
A++VF EM E R+ +SW AMI Q L L+ +M + + +T ++L+
Sbjct: 172 ENAYKVFEEMPE--RNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLS 229
Query: 258 AFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDL 317
A T L G H + + G H+ + LI MY KC + D ++F++ S D+
Sbjct: 230 ACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGD--LKDAFRIFDQFSNKDV 287
Query: 318 VLWNTMISGFSQHEDLSEDALICFQDMQ-RAGFRPDDCSFSCVTSACSNLSSPSLGKQVH 376
V WN+MI+G++QH L+ A+ F+ M ++G +PD ++ V S+C + G++
Sbjct: 288 VSWNSMIAGYAQH-GLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFF 346
Query: 377 ALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP-EHNTVSLNSMITGYAQHGV 435
L + + ++ + LV + + G L +A + + MP + N+V S++ HG
Sbjct: 347 NLMAEHGLKP-ELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGD 405
Query: 436 EGESLQLFE--LMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEK 484
++ E LM++ D ++ ++ A G +E +MK+K
Sbjct: 406 VWTGIRAAEERLMLEPDCAATHVQLANLY---ASVGYWKEAATVRKLMKDK 453
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 141/320 (44%), Gaps = 41/320 (12%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTN 78
++ ++ C RD TG H L +K YL + +LY G ++NA
Sbjct: 123 LSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAY------- 175
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
++F+E+P ++VS+ +I+ A ++L+ +
Sbjct: 176 ------------------------KVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSK 211
Query: 139 AREAGLCLDGFTLSGVIKACRED--VGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGL 196
R++ + +T + ++ AC +G +HC + G Y + N++++ Y G
Sbjct: 212 MRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGD 271
Query: 197 LSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMV-RMGMKIDMFTMASV 255
L +A+R+F + +D +SWN+MI Q +A+ LF M+ + G K D T V
Sbjct: 272 LKDAFRIFDQFSN--KDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGV 329
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGML-DCMKVFEEIS- 313
L++ + G +F M + G + S L+D+ + G+L + +++ E +
Sbjct: 330 LSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRF---GLLQEALELIENMPM 386
Query: 314 EPDLVLWNTMISGFSQHEDL 333
+P+ V+W +++ H D+
Sbjct: 387 KPNSVIWGSLLFSCRVHGDV 406
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 5/132 (3%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TFT LL C + G+S+H + + ++SN +Y KCG L +A F
Sbjct: 223 TFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQF 282
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEI-----PRPDIVSYNTLIAAHAHRGEHGPA 132
+N +V S+N++I +H A ELF+ + +PD ++Y ++++ H G
Sbjct: 283 SNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEG 342
Query: 133 VRLFKEAREAGL 144
+ F E GL
Sbjct: 343 RKFFNLMAEHGL 354
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 189/549 (34%), Positives = 298/549 (54%), Gaps = 19/549 (3%)
Query: 88 IIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLD 147
+I +C + + AR++FDE+P+ + YN++I ++ +RL+ + + D
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPD 115
Query: 148 GFTLSGVIKACREDVGLVMQ----LHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRV 203
T + IKAC GLV++ + C AV GY VC++VL Y G + EA +
Sbjct: 116 SSTFTMTIKACLS--GLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVL 173
Query: 204 FHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLE 263
F +M + RD I W M+ Q + +A+ + EM G D M +L A L
Sbjct: 174 FGKMAK--RDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLG 231
Query: 264 DLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCM-KVFEEISEPDLVLWNT 322
D G HG + ++G N V + L+DMY+K G ++ +VF + V W +
Sbjct: 232 DTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKV---GFIEVASRVFSRMMFKTAVSWGS 288
Query: 323 MISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKS 382
+ISGF+Q+ L+ A +MQ GF+PD + V ACS + S G+ VH +K
Sbjct: 289 LISGFAQN-GLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKR 347
Query: 383 DIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQL 442
+ +RV+ AL+ MYSKCG L +R +F+ + + V N+MI+ Y HG E + L
Sbjct: 348 HVL-DRVTAT-ALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSL 405
Query: 443 FELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLG 502
F M + +I P++ TF S+LSA +H+G VE+GQ +F++M K+ I+P KH+ C++DLL
Sbjct: 406 FLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLA 465
Query: 503 RAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVM 562
RAG++EEA +I + D W ALL C H N+ + AANK LQL P + +
Sbjct: 466 RAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTL 525
Query: 563 LSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEY 622
+SN +A+A +W+E A V++LMR ++K PG S I+++ ++ F+ ED SH H +
Sbjct: 526 VSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSH----HEHYH 581
Query: 623 MGEMLRKMK 631
M ++LR +K
Sbjct: 582 MLQVLRNLK 590
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 180/421 (42%), Gaps = 44/421 (10%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TFT +K C+S + G+++ + + ++ + LY KCG +D A
Sbjct: 118 TFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEV----- 172
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
LF ++ + D++ + T++ A G+ AV ++
Sbjct: 173 --------------------------LFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYR 206
Query: 138 EAREAGLCLDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
E + G D + G+++A + D + +H + G V +++ Y G
Sbjct: 207 EMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVG 266
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
+ A RVF M + +SW ++I Q +A EM +G + D+ T+ V
Sbjct: 267 FIEVASRVFSRM--MFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGV 324
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEP 315
L A + + L G H ++K + + L+DMYSKC + ++FE +
Sbjct: 325 LVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCG--ALSSSREIFEHVGRK 381
Query: 316 DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQV 375
DLV WNTMIS + H + ++ + F M + PD +F+ + SA S+ G+
Sbjct: 382 DLVCWNTMISCYGIHGN-GQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHW 440
Query: 376 HALAI-KSDI-PSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSL-NSMITGYAQ 432
++ I K I PS + V L+ + ++ G + +A + ++ N + + ++++G
Sbjct: 441 FSVMINKYKIQPSEKHYV--CLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCIN 498
Query: 433 H 433
H
Sbjct: 499 H 499
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 3/197 (1%)
Query: 374 QVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQH 433
Q+HA I + N S++ L+A + G + AR+VFD +P+ NSMI Y++
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRG 94
Query: 434 GVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKH 493
E L+L++ M+ E I P++ TF + AC +E+G+ + + FG + +
Sbjct: 95 KNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVD-FGYKNDVFV 153
Query: 494 FSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLE 553
S +++L + GK++EAE + M I W ++ + G AV+ + +Q E
Sbjct: 154 CSSVLNLYMKCGKMDEAEVLFGKMA-KRDVICWTTMVTGFAQAGKSLKAVEFYRE-MQNE 211
Query: 554 PHNAVPYVMLSNMYASA 570
VML + AS
Sbjct: 212 GFGRDRVVMLGLLQASG 228
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 310 bits (793), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 182/518 (35%), Positives = 284/518 (54%), Gaps = 11/518 (2%)
Query: 86 NAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLC 145
+ +ID +K + AR+LFD I + D+VS+ +I+ + G H A+ LFKE +
Sbjct: 51 DMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVK 110
Query: 146 LDGFTLSGVIKACREDVGLV---MQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWR 202
+ FT V+K+C+ D+G + MQ+H + V +A+L+ Y G + EA
Sbjct: 111 ANQFTYGSVLKSCK-DLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARL 169
Query: 203 VFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCL 262
F M E RD +SWNAMI + LF M+ G K D FT S+L A +
Sbjct: 170 QFDSMKE--RDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVV 227
Query: 263 EDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNT 322
+ L + HG IK GF + + L++ Y KC + + K+ E + DL+
Sbjct: 228 KCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGS--LANAWKLHEGTKKRDLLSCTA 285
Query: 323 MISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKS 382
+I+GFSQ + + DA F+DM R + D+ S + C+ ++S ++G+Q+H A+KS
Sbjct: 286 LITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKS 345
Query: 383 DIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQL 442
V++ N+L+ MY+K G + DA F+ M E + S S+I GY +HG +++ L
Sbjct: 346 SQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDL 405
Query: 443 FELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLG 502
+ M E I PN++TF+S+LSAC+HTG+ E G K ++ M K GIE +H SC++D+L
Sbjct: 406 YNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLA 465
Query: 503 RAGKLEEAERIIETMP--FDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPY 560
R+G LEEA +I + S W A L ACR+HGNV+L+ AA + L +EP V Y
Sbjct: 466 RSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNY 525
Query: 561 VMLSNMYASAGRWEESATVKRLMRERG-VKKKPGCSWI 597
+ L+++YA+ G W+ + ++LM+E G K PG S +
Sbjct: 526 INLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 197/416 (47%), Gaps = 25/416 (6%)
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
N+ +A++ + + AR FD + D+VS+N +I + + LF+
Sbjct: 147 NLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLML 206
Query: 141 EAGLCLDGFTLSGVIKA-----CREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
G D FT +++A C E +V +LH A+ G+ +++ +++ Y G
Sbjct: 207 TEGKKPDCFTFGSLLRASIVVKCLE---IVSELHGLAIKLGFGRSSALIRSLVNAYVKCG 263
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCRE-GKEALVLFGEMVRMGMKIDMFTMAS 254
L+ AW++ HE G RD +S A+I Q +A +F +M+RM K+D ++S
Sbjct: 264 SLANAWKL-HE-GTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSS 321
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSG-FNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEIS 313
+L T + + G Q HG +KS ++ +G+ LIDMY+K + D + FEE+
Sbjct: 322 MLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGE--IEDAVLAFEEMK 379
Query: 314 EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGK 373
E D+ W ++I+G+ +H + E A+ + M+ +P+D +F + SACS+ LG
Sbjct: 380 EKDVRSWTSLIAGYGRHGNF-EKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGW 438
Query: 374 QVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGY--- 430
+++ I R + ++ M ++ G L +A + + + VSL+S G
Sbjct: 439 KIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRS--KEGIVSLSSSTWGAFLD 496
Query: 431 --AQHG-VEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKE 483
+HG V+ + +L+ E P N +I++ S A G + +MKE
Sbjct: 497 ACRRHGNVQLSKVAATQLLSMEPRKPVN--YINLASVYAANGAWDNALNTRKLMKE 550
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 106/196 (54%), Gaps = 4/196 (2%)
Query: 269 MQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFS 328
+ HG I +GF N + LID+Y K + K+F+ IS+ D+V W MIS FS
Sbjct: 32 LLIHGNSITNGFCSNLQLKDMLIDLYLKQGD--VKHARKLFDRISKRDVVSWTAMISRFS 89
Query: 329 QHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNR 388
+ DAL+ F++M R + + ++ V +C +L G Q+H K + N
Sbjct: 90 RC-GYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNL 148
Query: 389 VSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQ 448
+ V +AL+++Y++CG + +AR FD+M E + VS N+MI GY + S LF+LM+
Sbjct: 149 I-VRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLT 207
Query: 449 EDIVPNNITFISVLSA 464
E P+ TF S+L A
Sbjct: 208 EGKKPDCFTFGSLLRA 223
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 85/156 (54%), Gaps = 3/156 (1%)
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHG 434
+H +I + SN + + + L+ +Y K G++ AR++FD + + + VS +MI+ +++ G
Sbjct: 34 IHGNSITNGFCSN-LQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCG 92
Query: 435 VEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHF 494
++L LF+ M +ED+ N T+ SVL +C G ++EG + + EK
Sbjct: 93 YHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSV-EKGNCAGNLIVR 151
Query: 495 SCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALL 530
S ++ L R GK+EEA ++M + + W A++
Sbjct: 152 SALLSLYARCGKMEEARLQFDSMK-ERDLVSWNAMI 186
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 309 bits (791), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 209/670 (31%), Positives = 324/670 (48%), Gaps = 76/670 (11%)
Query: 21 NLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNP 80
+LL C+ R G +HA I + + + + L YS +F L N
Sbjct: 48 SLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYS----------AFNLHNEA 97
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
N+ I LH P P +N LIA++A + +K
Sbjct: 98 QSIIENSDI--------LH---------PLP----WNVLIASYAKNELFEEVIAAYKRMV 136
Query: 141 EAGLCLDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLS 198
G+ D FT V+KAC E DV +H + Y VCNA+++ Y +
Sbjct: 137 SKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMG 196
Query: 199 EAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFT------- 251
A R+F M E RD +SWNA+I EA LF +M G+++ + T
Sbjct: 197 IARRLFDRMFE--RDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGG 254
Query: 252 ----------------------------MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWN 283
M L A + + + G + HG I S ++
Sbjct: 255 CLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGI 314
Query: 284 PHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQD 343
+V + LI MYSKC + + + VF + E L WN++ISG++Q SE+A ++
Sbjct: 315 DNVRNTLITMYSKC--KDLRHALIVFRQTEENSLCTWNSIISGYAQLNK-SEEASHLLRE 371
Query: 344 MQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCG 403
M AGF+P+ + + + C+ +++ GK+ H ++ + + N+LV +Y+K G
Sbjct: 372 MLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSG 431
Query: 404 NLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLS 463
+ A++V D M + + V+ S+I GY G G +L LF+ M + I P+++T ++VLS
Sbjct: 432 KIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLS 491
Query: 464 ACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGS 523
AC+H+ V EG++ F M+ ++GI P +HFSCMVDL GRAG L +A+ II MP+ P
Sbjct: 492 ACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSG 551
Query: 524 IEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLM 583
WA LL AC HGN ++ AA K L+++P N YV+++NMYA+AG W + A V+ +M
Sbjct: 552 ATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIM 611
Query: 584 RERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMK-QAGYVPDIRWA 642
R+ GVKK PGC+WI D+ +F D+S P + + + + MK AGY I
Sbjct: 612 RDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKDNAGYA--INKV 669
Query: 643 LGKDEDVAAE 652
DE++ E
Sbjct: 670 QSSDEELLQE 679
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 160/355 (45%), Gaps = 12/355 (3%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T+ ++LK C D++ G+ +H + S Y+ N +Y + + AR F
Sbjct: 146 TYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRM 205
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEI----PRPDIVSYNTLIAAHAHRGEHGPAV 133
+ S+NA+I+ A ELFD++ ++++N + G + A+
Sbjct: 206 FERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGAL 265
Query: 134 RLFKEAREAGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARY 191
L R LD + +KAC + L ++H A+ Y +V N ++ Y
Sbjct: 266 GLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMY 325
Query: 192 GGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFT 251
L A VF + E +WN++I Q + +EA L EM+ G + + T
Sbjct: 326 SKCKDLRHALIVFRQTEE--NSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSIT 383
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSG-FNWNPHVGSGLIDMYSKCAPRGMLDCMKVFE 310
+AS+L + +L G +FH +++ F + + L+D+Y+K ++ +V +
Sbjct: 384 LASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGK--IVAAKQVSD 441
Query: 311 EISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSN 365
+S+ D V + ++I G+ + AL F++M R+G +PD + V SACS+
Sbjct: 442 LMSKRDEVTYTSLIDGYGNQGE-GGVALALFKEMTRSGIKPDHVTVVAVLSACSH 495
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 110/221 (49%), Gaps = 4/221 (1%)
Query: 249 MFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKV 308
+ + AS+L+A + G+Q H I SG ++ + L+ YS +
Sbjct: 43 LHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIE 102
Query: 309 FEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSS 368
+I P + WN +I+ ++++E L E+ + ++ M G RPD ++ V AC
Sbjct: 103 NSDILHP--LPWNVLIASYAKNE-LFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLD 159
Query: 369 PSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMIT 428
+ G+ VH +I+ + + V NAL++MY + N+ ARR+FD M E + VS N++I
Sbjct: 160 VAFGRVVHG-SIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVIN 218
Query: 429 GYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTG 469
YA G+ E+ +LF+ M + + IT+ + C TG
Sbjct: 219 CYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG 259
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 308 bits (789), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 188/612 (30%), Positives = 325/612 (53%), Gaps = 19/612 (3%)
Query: 33 STGKSLHALYIKTFIPHSTYLSNHFTLL----------YSKCGTLDNARTSFRLTNNPNV 82
++GKSL L + + + N +T++ Y+K G +A T++ +
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320
Query: 83 FSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREA 142
+ NA+I + + A + ++ D+V++N+LI + + A+ F + A
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 380
Query: 143 GLCLDGFTLSGVIKACREDVGLV--MQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEA 200
G D +++ +I A L+ M+LH + + G+ V N ++ Y L
Sbjct: 381 GHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYM 440
Query: 201 WRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFT 260
R F M + +D ISW +I Q EAL LF ++ + M+ID + S+L A +
Sbjct: 441 GRAFLRMHD--KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Query: 261 CLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLW 320
L+ + + H +++ G + + + L+D+Y KC R M +VFE I D+V W
Sbjct: 499 VLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKC--RNMGYATRVFESIKGKDVVSW 555
Query: 321 NTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAI 380
+MIS + + + SE A+ F+ M G D + C+ SA ++LS+ + G+++H +
Sbjct: 556 TSMISSSALNGNESE-AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLL 614
Query: 381 KSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESL 440
+ S+ A+V MY+ CG+L A+ VFD + + SMI Y HG ++
Sbjct: 615 RKGFCLEG-SIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAV 673
Query: 441 QLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDL 500
+LF+ M E++ P++I+F+++L AC+H G ++EG+ + +M+ ++ +EP +H+ C+VD+
Sbjct: 674 ELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDM 733
Query: 501 LGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPY 560
LGRA + EA ++ M +P + W ALL ACR H E+ AA + L+LEP N
Sbjct: 734 LGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNL 793
Query: 561 VMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIH 620
V++SN++A GRW + V+ M+ G++K PGCSWI++D KVH F A D SHP KEI+
Sbjct: 794 VLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIY 853
Query: 621 EYMGEMLRKMKQ 632
E + E+ RK+++
Sbjct: 854 EKLSEVTRKLER 865
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 151/538 (28%), Positives = 261/538 (48%), Gaps = 48/538 (8%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
+F LLK C RDI +G LH+L +K L Y G
Sbjct: 184 SFPALLKACAKLRDIRSGSELHSLLVK--------------LGYHSTG------------ 217
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIP-RPDIVSYNTLIAAHAHRGEHGPAVRLF 136
F NA++ K+ L AR LFD + D V +N+++++++ G+ + LF
Sbjct: 218 -----FIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELF 272
Query: 137 KEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYAS---VCNAVLARYGG 193
+E G + +T+ + AC + A + S ++S VCNA++A Y
Sbjct: 273 REMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTR 332
Query: 194 RGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMA 253
G + +A R+ +M D ++WN++I Q KEAL F +M+ G K D +M
Sbjct: 333 CGKMPQAERILRQMNNA--DVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMT 390
Query: 254 SVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCM--KVFEE 311
S++ A L +L GM+ H +IK G++ N VG+ LIDMYSKC L C + F
Sbjct: 391 SIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCN----LTCYMGRAFLR 446
Query: 312 ISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSL 371
+ + DL+ W T+I+G++Q+ D +AL F+D+ + D+ + A S L S +
Sbjct: 447 MHDKDLISWTTVIAGYAQN-DCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLI 505
Query: 372 GKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYA 431
K++H ++ + + N LV +Y KC N+ A RVF+++ + VS SMI+ A
Sbjct: 506 VKEIHCHILRKGLLD--TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSA 563
Query: 432 QHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEA 491
+G E E+++LF M++ + +++ + +LSA A + +G++ + K G E
Sbjct: 564 LNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRK-GFCLEG 622
Query: 492 KHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKF 549
+VD+ G L+ A+ + + + G +++ +++ A HG + AV+ +K
Sbjct: 623 SIAVAVVDMYACCGDLQSAKAVFDRIE-RKGLLQYTSMINAYGMHGCGKAAVELFDKM 679
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 140/537 (26%), Positives = 254/537 (47%), Gaps = 43/537 (8%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKTFIPHS-TYLSNHFTLLYSKCGTLDNARTSFRLT 77
F +L+ C +R +S G+ LH+ KTF +L+ +Y KCG+LD+A
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAE------ 136
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
++FDE+P ++NT+I A+ GE A+ L+
Sbjct: 137 -------------------------KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYW 171
Query: 138 EAREAGLCLDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
R G+ L + ++KAC + D+ +LH V GY + NA+++ Y
Sbjct: 172 NMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKND 231
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
LS A R+F E D + WN+++ + + E L LF EM G + +T+ S
Sbjct: 232 DLSAARRLFDGFQEKG-DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSA 290
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNP-HVGSGLIDMYSKCAPRGMLDCMKVFEEISE 314
LTA G + H ++KS + + +V + LI MY++C M ++ +++
Sbjct: 291 LTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGK--MPQAERILRQMNN 348
Query: 315 PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQ 374
D+V WN++I G+ Q+ + ++AL F DM AG + D+ S + + +A LS+ G +
Sbjct: 349 ADVVTWNSLIKGYVQNL-MYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGME 407
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHG 434
+HA IK SN + V N L+ MYSKC R F M + + +S ++I GYAQ+
Sbjct: 408 LHAYVIKHGWDSN-LQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQND 466
Query: 435 VEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHF 494
E+L+LF + ++ + + + S+L A + + ++ + K ++ ++
Sbjct: 467 CHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNE 526
Query: 495 SCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ 551
+VD+ G+ + A R+ E++ + W +++ + +GN AV+ + ++
Sbjct: 527 --LVDVYGKCRNMGYATRVFESIK-GKDVVSWTSMISSSALNGNESEAVELFRRMVE 580
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 16/245 (6%)
Query: 338 LICFQDMQRAGFRPDDCS--------FSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRV 389
L CF + F+ D S F+ V C + S G+Q+H+ K+ PS +
Sbjct: 57 LACFDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKT-FPSFEL 115
Query: 390 S-VNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQ 448
+ LV MY KCG+L DA +VFD MP+ + N+MI Y +G +L L+ M
Sbjct: 116 DFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRV 175
Query: 449 EDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLE 508
E + +F ++L ACA + G + +++ K G + +V + + L
Sbjct: 176 EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLV-KLGYHSTGFIVNALVSMYAKNDDLS 234
Query: 509 EAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVP--YVMLSNM 566
A R+ + ++ W ++L + G +++ F ++ P Y ++S +
Sbjct: 235 AARRLFDGFQEKGDAVLWNSILSSYSTSGK---SLETLELFREMHMTGPAPNSYTIVSAL 291
Query: 567 YASAG 571
A G
Sbjct: 292 TACDG 296
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 282/533 (52%), Gaps = 41/533 (7%)
Query: 73 SFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPA 132
+ RL ++ N++++ K+ ++ A +F E+P ++VS+N +I +
Sbjct: 275 ALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKS 334
Query: 133 VRLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYG 192
V R++G + T V+ AC
Sbjct: 335 VEFLTRMRDSGFQPNEVTCISVLGACFRS------------------------------- 363
Query: 193 GRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTM 252
G + R+F + + +WNAM+ +EA+ F +M +K D T+
Sbjct: 364 --GDVETGRRIFSSIPQPSVS--AWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTL 419
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEE- 311
+ +L++ L L GG Q HG +I++ + N H+ SGLI +YS+C + +C +F++
Sbjct: 420 SVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISEC--IFDDC 477
Query: 312 ISEPDLVLWNTMISGFSQHEDLSEDALICFQDM-QRAGFRPDDCSFSCVTSACSNLSSPS 370
I+E D+ WN+MISGF +H L ALI F+ M Q A P++ SF+ V S+CS L S
Sbjct: 478 INELDIACWNSMISGF-RHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLL 536
Query: 371 LGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGY 430
G+Q H L +KS S+ V AL MY KCG + AR+ FD + NTV N MI GY
Sbjct: 537 HGRQFHGLVVKSGYVSDSF-VETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGY 595
Query: 431 AQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPE 490
+G E++ L+ M+ P+ ITF+SVL+AC+H+G VE G + + M+ GIEPE
Sbjct: 596 GHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPE 655
Query: 491 AKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFL 550
H+ C+VD LGRAG+LE+AE++ E P+ S+ W LL +CR HG+V LA + A K +
Sbjct: 656 LDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLM 715
Query: 551 QLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKV 603
+L+P ++ YV+LSN Y+S +W++SA ++ LM + V K PG SW N +
Sbjct: 716 RLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGNDL 768
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 219/472 (46%), Gaps = 57/472 (12%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTN 78
+LL+ +R +GK +H ++ + TYL N LY +CG D AR F +
Sbjct: 9 LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS 68
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
+V+S+NA + K L A E+FD +P D+VS+N +I+ +G A+ ++K
Sbjct: 69 VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR 128
Query: 139 AREAGLCLDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGL 196
G FTL+ V+ AC + D M+ H AV G V NA+L+ Y G
Sbjct: 129 MVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 188
Query: 197 LSE-AWRVFHEMGEGCRDEISWNAMIVACGQCREGK--EALVLFGEMVRMGMKIDMFTMA 253
+ + RVF + + +E+S+ A+I G RE K EA+ +F M G+++D ++
Sbjct: 189 IVDYGVRVFESLSQ--PNEVSYTAVI--GGLARENKVLEAVQMFRLMCEKGVQVDSVCLS 244
Query: 254 SVLT------AFTCLEDLAG---GMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD 304
++L+ L ++ G G Q H ++ GF + H+ + L+++Y+K + M
Sbjct: 245 NILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAK--NKDMNG 302
Query: 305 CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACS 364
+F E+ E ++V WN MI GF Q E S+ ++ M+ +GF+P++ + V AC
Sbjct: 303 AELIFAEMPEVNVVSWNIMIVGFGQ-EYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACF 361
Query: 365 NLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLN 424
G+++ S IP VS NA
Sbjct: 362 RSGDVETGRRIF-----SSIPQPSVSAWNA------------------------------ 386
Query: 425 SMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQK 476
M++GY+ + E++ F M +++ P+ T +LS+CA +E G++
Sbjct: 387 -MLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQ 437
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 216/665 (32%), Positives = 327/665 (49%), Gaps = 91/665 (13%)
Query: 30 RDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAII 89
R I +G +L A+ SN LYSK G L AR F NV+S+NA+I
Sbjct: 13 RSIKSGSTLTAVS-----------SNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVI 61
Query: 90 DACVKHSHLHLARELF--DEIPRPDIVSYNTLIAAHAHR-GEHGPAVRLFKE---AREAG 143
A VK +++ ARELF D R D+++YNTL++ A G A+ +F E +
Sbjct: 62 AAYVKFNNVKEARELFESDNCER-DLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDD 120
Query: 144 LCLDGFTLSGVIK--ACREDVGLVMQLHCFAVLCG--------------YS-C--YASVC 184
+ +D FT++ ++K A +V QLH V G YS C + VC
Sbjct: 121 IWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVC 180
Query: 185 N----------------AVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCR 228
N A++A Y G + +A VF E D ISWN +I Q
Sbjct: 181 NIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPE-LNDTISWNTLIAGYAQNG 239
Query: 229 EGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGS 288
+EAL + M G+K D + +VL + L+ L G + H R++K+G N V S
Sbjct: 240 YEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSS 299
Query: 289 GLIDMYSKC----------------------------APRG-MLDCMKVFEEISEPDLVL 319
G++D+Y KC + +G M++ ++F+ +SE +LV+
Sbjct: 300 GIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVV 359
Query: 320 WNTMISGF---SQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVH 376
W M G+ Q + + E A + PD V ACS + GK++H
Sbjct: 360 WTAMFLGYLNLRQPDSVLELARAFIANETNT---PDSLVMVSVLGACSLQAYMEPGKEIH 416
Query: 377 ALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVE 436
++++ I ++ V A V MYSKCGN+ A R+FD+ E +TV N+MI G A HG E
Sbjct: 417 GHSLRTGILMDKKLVT-AFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHE 475
Query: 437 GESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSC 496
+S Q FE M + P+ ITF+++LSAC H G V EG+KYF M E + I PE H++C
Sbjct: 476 AKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTC 535
Query: 497 MVDLLGRAGKLEEAERIIETM-PFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPH 555
M+DL G+A +L++A ++E + + ++ A L AC + N EL + K L +E
Sbjct: 536 MIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGS 595
Query: 556 NAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPM 615
N Y+ ++N YAS+GRW+E ++ MR + ++ GCSW ID + H+F + D SH
Sbjct: 596 NGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYE 655
Query: 616 IKEIH 620
+ I+
Sbjct: 656 TEAIY 660
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 124/286 (43%), Gaps = 10/286 (3%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
+F +L S + + GK +HA +K + ++S+ +Y KCG + A ++ L
Sbjct: 262 SFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLY 321
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
N++S +++I + A+ LFD + ++V + + + + + + L +
Sbjct: 322 GFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELAR 381
Query: 138 E--AREAGLCLDGFTLSGVIKACREDVGLV--MQLHCFAVLCGYSCYASVCNAVLARYGG 193
A E D + V+ AC + ++H ++ G + A + Y
Sbjct: 382 AFIANETN-TPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSK 440
Query: 194 RGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMA 253
G + A R+F E RD + +NAMI C ++ F +M G K D T
Sbjct: 441 CGNVEYAERIFDSSFE--RDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFM 498
Query: 254 SVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVG--SGLIDMYSKC 297
++L+A + G ++ MI++ +N +P G + +ID+Y K
Sbjct: 499 ALLSACRHRGLVLEGEKYFKSMIEA-YNISPETGHYTCMIDLYGKA 543
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 7/141 (4%)
Query: 376 HALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGV 435
H +IKS VS +N LV +YSK G L +AR VFD M E N S N++I Y +
Sbjct: 11 HIRSIKSGSTLTAVS-SNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNN 69
Query: 436 EGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVE-EGQKYFNMM--KEKFGIEPEAK 492
E+ +LFE ++ + IT+ ++LS A T E E + F M KEK I +
Sbjct: 70 VKEARELFE---SDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDF 126
Query: 493 HFSCMVDLLGRAGKLEEAERI 513
+ MV L + + E++
Sbjct: 127 TVTTMVKLSAKLTNVFYGEQL 147
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 303 bits (776), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 188/566 (33%), Positives = 301/566 (53%), Gaps = 24/566 (4%)
Query: 76 LTNNPNVFSYNAIIDACVKHSHLHLARELFDEIP-RPDIVSYNTLIAAHAHRGEHGPAVR 134
+ N +F+ +I A + AR+LFD+ P R D N++I A+ ++ +
Sbjct: 6 IETNVQIFTKFLVISASA--VGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFA 63
Query: 135 LFKEAR-EAGLCLDGFTLSGVIKACREDVGLV--MQLHCFAVLCGYSCYASVCNAVLARY 191
L+++ R E D FT + + K+C + + +QLH G+ V V+ Y
Sbjct: 64 LYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMY 123
Query: 192 GGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFT 251
G + A F EM R E+SW A+I +C E A LF +M + D+
Sbjct: 124 AKFGKMGCARNAFDEMPH--RSEVSWTALISGYIRCGELDLASKLFDQMPHVK---DVVI 178
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMI-KSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFE 310
+++ F D+ + M K+ W + + C + + K+F+
Sbjct: 179 YNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMI-------HGYCNIKDIDAARKLFD 231
Query: 311 EISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQ-RAGFRPDDCSFSCVTSACSNLSSP 369
+ E +LV WNTMI G+ Q++ ++ + FQ+MQ PDD + V A S+ +
Sbjct: 232 AMPERNLVSWNTMIGGYCQNKQ-PQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGAL 290
Query: 370 SLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITG 429
SLG+ H + + +V V A++ MYSKCG + A+R+FD MPE S N+MI G
Sbjct: 291 SLGEWCHCFVQRKKL-DKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHG 349
Query: 430 YAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEP 489
YA +G +L LF MM E+ P+ IT ++V++AC H G VEEG+K+F++M+E G+
Sbjct: 350 YALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMRE-MGLNA 407
Query: 490 EAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKF 549
+ +H+ CMVDLLGRAG L+EAE +I MPF+P I ++ L AC ++ ++E A + K
Sbjct: 408 KIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKA 467
Query: 550 LQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAE 609
++LEP N YV+L N+YA+ RW++ VK +MR+ KK+ GCS I+I+ V F++
Sbjct: 468 VELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISG 527
Query: 610 DSSHPMIKEIHEYMGEMLRKMKQAGY 635
D++HP + IH +G++L M + Y
Sbjct: 528 DTTHPHRRSIHLVLGDLLMHMNEEKY 553
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/475 (23%), Positives = 194/475 (40%), Gaps = 83/475 (17%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TFT L K C + G LH+ + Y+S +Y+K G + AR +F
Sbjct: 80 TFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEM 139
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPR-PDIVSYNTLIAAHAHRGEHGPAVRLF 136
+ + S+ A+I ++ L LA +LFD++P D+V YN ++ G+ A RLF
Sbjct: 140 PHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLF 199
Query: 137 KEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGL 196
E + + +H GY CN
Sbjct: 200 DEMTHKTV-----------------ITWTTMIH------GY------CNI--------KD 222
Query: 197 LSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEM-VRMGMKIDMFTMASV 255
+ A ++F M E R+ +SWN MI Q ++ +E + LF EM + D T+ SV
Sbjct: 223 IDAARKLFDAMPE--RNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSV 280
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEP 315
L A + L+ G H + + + V + ++DMYSKC + ++F+E+ E
Sbjct: 281 LPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGE--IEKAKRIFDEMPEK 338
Query: 316 DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQV 375
+ WN MI G++ + + + AL F M +PD+ + V +AC++ G++
Sbjct: 339 QVASWNAMIHGYALNGN-ARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKW 396
Query: 376 HALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGV 435
+ + + + ++ +V + + G+L +A + MP
Sbjct: 397 FHVMREMGLNA-KIEHYGCMVDLLGRAGSLKEAEDLITNMP------------------- 436
Query: 436 EGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPE 490
FE PN I S LSAC +E ++ ++K+ +EP+
Sbjct: 437 -------FE--------PNGIILSSFLSACGQYKDIERAER---ILKKAVELEPQ 473
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 301 bits (772), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 226/831 (27%), Positives = 361/831 (43%), Gaps = 138/831 (16%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T+ LL+ CI I G+ LHA + F ++ +Y+KCG + +AR F
Sbjct: 83 TYLKLLESCIDSGSIHLGRILHARF-GLFTEPDVFVETKLLSMYAKCGCIADARKVFDSM 141
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELF----------DEIPRPDIVS------------ 115
N+F+++A+I A + + +LF D+ P I+
Sbjct: 142 RERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGK 201
Query: 116 -----------------YNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKA- 157
N+++A +A GE A + F+ RE D + V+ A
Sbjct: 202 VIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAY 257
Query: 158 CR-----EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEG-- 210
C+ E V LV ++ + G + N ++ Y G A + +M
Sbjct: 258 CQNGKHEEAVELVKEMEKEGISPGLVTW----NILIGGYNQLGKCDAAMDLMQKMETFGI 313
Query: 211 CRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQ 270
D +W AMI +AL +F +M G+ + T+ S ++A +CL+ + G +
Sbjct: 314 TADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSE 373
Query: 271 FHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEIS----------------- 313
H +K GF + VG+ L+DMYSKC + D KVF+ +
Sbjct: 374 VHSIAVKMGFIDDVLVGNSLVDMYSKCGK--LEDARKVFDSVKNKDVYTWNSMITGYCQA 431
Query: 314 ------------------EPDLVLWNTMISGFSQHEDLSE-------------------- 335
P+++ WNTMISG+ ++ D E
Sbjct: 432 GYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTAT 491
Query: 336 ---------------DALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAI 380
+AL F+ MQ + F P+ + + AC+NL + +++H +
Sbjct: 492 WNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVL 551
Query: 381 KSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESL 440
+ ++ + +V NAL Y+K G++ +R +F M + ++ NS+I GY HG G +L
Sbjct: 552 RRNLDAIH-AVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPAL 610
Query: 441 QLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDL 500
LF M + I PN T S++ A G V+EG+K F + + I P +H S MV L
Sbjct: 611 ALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYL 670
Query: 501 LGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPY 560
GRA +LEEA + I+ M + W + L CR HG++++A+ AA LEP N
Sbjct: 671 YGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATE 730
Query: 561 VMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIH 620
++S +YA + S + R+ +KK G SWI++ N +H F D S ++
Sbjct: 731 SIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLY 790
Query: 621 EYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTK--EGV 678
+ +M R ++ W + E +E HSEK A+AFGLIS+
Sbjct: 791 PLVEKMSRLDNRSDQYNGELW-------IEEEGREETCGIHSEKFAMAFGLISSSGASKT 843
Query: 679 PILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
I ++KNLR+C DCH+ K +S G +I + D H FK G CSCKDYW
Sbjct: 844 TIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 176/522 (33%), Positives = 286/522 (54%), Gaps = 9/522 (1%)
Query: 103 ELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACREDV 162
++FDE+P D+ S+NT+I+ GE A+ LF +G + +L+ I AC +
Sbjct: 163 QVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLL 222
Query: 163 GLV--MQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAM 220
L ++H V G+ V +A++ YG L A VF +M + ++WN+M
Sbjct: 223 WLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPR--KSLVAWNSM 280
Query: 221 IVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGF 280
I + K + + M+ G + T+ S+L A + +L G HG +I+S
Sbjct: 281 IKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVV 340
Query: 281 NWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALIC 340
N + +V LID+Y KC + + VF + + WN MIS + + + A+
Sbjct: 341 NADIYVNCSLIDLYFKCGEANLAE--TVFSKTQKDVAESWNVMISSYISVGNWFK-AVEV 397
Query: 341 FQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYS 400
+ M G +PD +F+ V ACS L++ GKQ+H +S + ++ + ++ AL+ MYS
Sbjct: 398 YDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLS-ALLDMYS 456
Query: 401 KCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFIS 460
KCGN +A R+F+++P+ + VS MI+ Y HG E+L F+ M + + P+ +T ++
Sbjct: 457 KCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLA 516
Query: 461 VLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFD 520
VLSAC H G ++EG K+F+ M+ K+GIEP +H+SCM+D+LGRAG+L EA II+ P
Sbjct: 517 VLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPET 576
Query: 521 PGSIE-WAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATV 579
+ E + L AC H L + A ++ P +A Y++L N+YAS W+ + V
Sbjct: 577 SDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRV 636
Query: 580 KRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHE 621
+ M+E G++KKPGCSWI++ +KV F AED SH + ++E
Sbjct: 637 RLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYE 678
Score = 192 bits (487), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 130/448 (29%), Positives = 222/448 (49%), Gaps = 24/448 (5%)
Query: 101 ARELFDEIP-RPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCL-DGFTLSGVIKAC 158
AR +F+ R D+ +N+L++ ++ + +FK +C+ D FT VIKA
Sbjct: 58 ARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAY 117
Query: 159 ----REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDE 214
RE +G + +H V GY C V ++++ Y L + +VF EM E RD
Sbjct: 118 GALGREFLGRM--IHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPE--RDV 173
Query: 215 ISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGR 274
SWN +I Q E ++AL LFG M G + + ++ ++A + L L G + H +
Sbjct: 174 ASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRK 233
Query: 275 MIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCM----KVFEEISEPDLVLWNTMISGFSQH 330
+K GF + +V S L+DMY KC DC+ +VF+++ LV WN+MI G+
Sbjct: 234 CVKKGFELDEYVNSALVDMYGKC------DCLEVAREVFQKMPRKSLVAWNSMIKGYVAK 287
Query: 331 EDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVS 390
D S+ + M G RP + + + ACS + GK +H I+S + ++ +
Sbjct: 288 GD-SKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNAD-IY 345
Query: 391 VNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQED 450
VN +L+ +Y KCG + A VF + S N MI+ Y G +++++++ M+
Sbjct: 346 VNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVG 405
Query: 451 IVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEA 510
+ P+ +TF SVL AC+ +E+G++ + E +E + S ++D+ + G +EA
Sbjct: 406 VKPDVVTFTSVLPACSQLAALEKGKQIHLSISES-RLETDELLLSALLDMYSKCGNEKEA 464
Query: 511 ERIIETMPFDPGSIEWAALLGACRKHGN 538
RI ++P + W ++ A HG
Sbjct: 465 FRIFNSIP-KKDVVSWTVMISAYGSHGQ 491
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 166/346 (47%), Gaps = 17/346 (4%)
Query: 213 DEISWNAMIVACGQCREGKEALVLFGEMVRMGMKI-DMFTMASVLTAFTCLEDLAGGMQF 271
D WN+++ + + L +F ++ + + D FT +V+ A+ L G +F
Sbjct: 70 DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL-----GREF 124
Query: 272 HGRMI-----KSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISG 326
GRMI KSG+ + V S L+ MY+K + ++VF+E+ E D+ WNT+IS
Sbjct: 125 LGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNL--FENSLQVFDEMPERDVASWNTVISC 182
Query: 327 FSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPS 386
F Q + +E AL F M+ +GF P+ S + SACS L GK++H +K
Sbjct: 183 FYQSGE-AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFEL 241
Query: 387 NRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELM 446
+ VN+ALV MY KC L AR VF MP + V+ NSMI GY G +++ M
Sbjct: 242 DEY-VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM 300
Query: 447 MQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGK 506
+ E P+ T S+L AC+ + + G K+ + + + + ++DL + G+
Sbjct: 301 IIEGTRPSQTTLTSILMACSRSRNLLHG-KFIHGYVIRSVVNADIYVNCSLIDLYFKCGE 359
Query: 507 LEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQL 552
AE + D W ++ + GN AV+ ++ + +
Sbjct: 360 ANLAETVFSKTQKDVAE-SWNVMISSYISVGNWFKAVEVYDQMVSV 404
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 137/281 (48%), Gaps = 8/281 (2%)
Query: 272 HGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEIS-EPDLVLWNTMISGFSQH 330
H R++ G + + LI++Y C + VFE D+ +WN+++SG+S++
Sbjct: 27 HQRILTLGLRRDVVLCKSLINVYFTC--KDHCSARHVFENFDIRSDVYIWNSLMSGYSKN 84
Query: 331 EDLSEDALICFQDMQRAGF-RPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRV 389
+ D L F+ + PD +F V A L LG+ +H L +KS + V
Sbjct: 85 -SMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCD-V 142
Query: 390 SVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQE 449
V ++LV MY+K ++ +VFD MPE + S N++I+ + Q G ++L+LF M
Sbjct: 143 VVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESS 202
Query: 450 DIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEE 509
PN+++ +SAC+ +E G++ +K G E + S +VD+ G+ LE
Sbjct: 203 GFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKK-GFELDEYVNSALVDMYGKCDCLEV 261
Query: 510 AERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFL 550
A + + MP + W +++ G+ + V+ N+ +
Sbjct: 262 AREVFQKMP-RKSLVAWNSMIKGYVAKGDSKSCVEILNRMI 301
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 134/303 (44%), Gaps = 44/303 (14%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T T++L C R++ GK +H I++ + Y++ LY KCG + A T F T
Sbjct: 311 TLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKT 370
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEI----PRPDIVSYNTLIAAHAHRGEHGPAV 133
S+N +I + + + A E++D++ +PD+V++ +++ A +
Sbjct: 371 QKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGK 430
Query: 134 RLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGG 193
++ E+ L D LS A+L Y
Sbjct: 431 QIHLSISESRLETDELLLS---------------------------------ALLDMYSK 457
Query: 194 RGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMA 253
G EA+R+F+ + + +D +SW MI A G + +EAL F EM + G+K D T+
Sbjct: 458 CGNEKEAFRIFNSIPK--KDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLL 515
Query: 254 SVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVG--SGLIDMYSKCAPRGMLDCMKVFEE 311
+VL+A + G++F +M +S + P + S +ID+ + +L+ ++ ++
Sbjct: 516 AVLSACGHAGLIDEGLKFFSQM-RSKYGIEPIIEHYSCMIDILGRAGR--LLEAYEIIQQ 572
Query: 312 ISE 314
E
Sbjct: 573 TPE 575
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 190/580 (32%), Positives = 312/580 (53%), Gaps = 22/580 (3%)
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
++F ++ I + + +R +FD +I +NT+I + ++ LF EA
Sbjct: 250 DLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAI 309
Query: 141 EAGLCLDG---FTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLL 197
+ + + L+ + + V L Q H F + N+++ Y G +
Sbjct: 310 GSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSV 369
Query: 198 SEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLT 257
+++ VF M E RD +SWN MI A Q E L+L EM + G KID T+ ++L+
Sbjct: 370 HKSFGVFLSMRE--RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLS 427
Query: 258 AFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD-CMKVFEE--ISE 314
A + L + G Q H +I+ G + + S LIDMYSK G++ K+FE +E
Sbjct: 428 AASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKS---GLIRISQKLFEGSGYAE 483
Query: 315 PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQ 374
D WN+MISG++Q+ +E + F+ M RP+ + + + ACS + S LGKQ
Sbjct: 484 RDQATWNSMISGYTQNGH-TEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQ 542
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHG 434
+H +I+ + N V V +ALV MYSK G + A +F E N+V+ +MI GY QHG
Sbjct: 543 LHGFSIRQYLDQN-VFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHG 601
Query: 435 VEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHF 494
+ ++ LF M + I P+ ITF++VLSAC+++G ++EG K F M+E + I+P ++H+
Sbjct: 602 MGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHY 661
Query: 495 SCMVDLLGRAGKLEEAERIIETMPFDPGSIE--WAALLGACRKHGNVELAVKAANKFLQL 552
C+ D+LGR G++ EA ++ + + G+I W +LLG+C+ HG +ELA + + +
Sbjct: 662 CCITDMLGRVGRVNEAYEFVKGLG-EEGNIAELWGSLLGSCKLHGELELAETVSERLAKF 720
Query: 553 EP-HNAVPY-VMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAED 610
+ N Y V+LSNMYA +W+ V+R MRE+G+KK+ G S I+I V+ FV+ D
Sbjct: 721 DKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRD 780
Query: 611 SSHPMIKEIHEYMGEMLRKMKQAGY---VPDIRWALGKDE 647
HP EI++ + + + M+ + +P + +L DE
Sbjct: 781 QEHPHSSEIYDVIDGLAKDMRGDSFLTTLPTVTPSLELDE 820
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 151/584 (25%), Positives = 276/584 (47%), Gaps = 58/584 (9%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T+++ LK C +++ GK++H I+ S + N +Y C
Sbjct: 109 TYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSC------------L 156
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLF- 136
N P+ F Y+ + R++FD + R ++V++NTLI+ + G + A R F
Sbjct: 157 NAPDCFEYDVV-------------RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFG 203
Query: 137 ----KEAREAGL----CLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVL 188
E + + + ++S IK GL+++L Y V ++ +
Sbjct: 204 IMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLG-----DEYVKDLFVVSSAI 258
Query: 189 ARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKI- 247
+ Y G + + RVF E R+ WN MI Q E++ LF E + +
Sbjct: 259 SMYAELGDIESSRRVFDSCVE--RNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVS 316
Query: 248 DMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMK 307
D T +A + L+ + G QFHG + K+ + + L+ MYS+C +
Sbjct: 317 DEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCG--SVHKSFG 374
Query: 308 VFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLS 367
VF + E D+V WNTMIS F Q+ L ++ L+ +MQ+ GF+ D + + + SA SNL
Sbjct: 375 VFLSMRERDVVSWNTMISAFVQN-GLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLR 433
Query: 368 SPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFD--TMPEHNTVSLNS 425
+ +GKQ HA I+ I +N+ L+ MYSK G + ++++F+ E + + NS
Sbjct: 434 NKEIGKQTHAFLIRQGIQFE--GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNS 491
Query: 426 MITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKF 485
MI+GY Q+G ++ +F M++++I PN +T S+L AC+ G V+ G++ ++
Sbjct: 492 MISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY 551
Query: 486 GIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKA 545
++ S +VD+ +AG ++ AE + + S+ + ++ +HG + +A
Sbjct: 552 -LDQNVFVASALVDMYSKAGAIKYAEDMFSQTK-ERNSVTYTTMILGYGQHG---MGERA 606
Query: 546 ANKFLQLEPH----NAVPYVMLSNMYASAGRWEESATVKRLMRE 585
+ FL ++ +A+ +V + + + +G +E + MRE
Sbjct: 607 ISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMRE 650
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/490 (24%), Positives = 229/490 (46%), Gaps = 24/490 (4%)
Query: 77 TNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLF 136
T P S + + + + LAR+LFD IP+P V +NT+I A+ +
Sbjct: 34 TLTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFY 93
Query: 137 KEAREAG--LCLDGFTLSGVIKACREDVGLVM--QLHCFAVLCGYSCYASVCNAVLARYG 192
++ D +T S +KAC E L +HC + C + V N+++ Y
Sbjct: 94 SRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYV 153
Query: 193 GRGLLSEAW------RVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMK 246
+ + +VF M ++ ++WN +I + EA FG M+RM +K
Sbjct: 154 SCLNAPDCFEYDVVRKVFDNMRR--KNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVK 211
Query: 247 IDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNW--NPHVGSGLIDMYSKCAPRGMLD 304
+ +V A + + F+G M+K G + + V S I MY++ +
Sbjct: 212 PSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGD--IES 269
Query: 305 CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACS 364
+VF+ E ++ +WNTMI + Q++ L E + + + D+ ++ SA S
Sbjct: 270 SRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVS 329
Query: 365 NLSSPSLGKQVHALAIKS--DIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVS 422
L LG+Q H K+ ++P + + N+L+ MYS+CG++H + VF +M E + VS
Sbjct: 330 ALQQVELGRQFHGFVSKNFRELP---IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVS 386
Query: 423 LNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMK 482
N+MI+ + Q+G++ E L L M ++ + IT ++LSA ++ E G++ +
Sbjct: 387 WNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLI 446
Query: 483 EKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPF-DPGSIEWAALLGACRKHGNVEL 541
+ GI+ E + S ++D+ ++G + ++++ E + + W +++ ++G+ E
Sbjct: 447 RQ-GIQFEGMN-SYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEK 504
Query: 542 AVKAANKFLQ 551
K L+
Sbjct: 505 TFLVFRKMLE 514
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 176/538 (32%), Positives = 308/538 (57%), Gaps = 26/538 (4%)
Query: 99 HLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKAC 158
+LA +F+++ P++ N+LI AHA + A +F E + GL D FT ++KAC
Sbjct: 68 NLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKAC 127
Query: 159 --REDVGLVMQLHCFAVLCGYSCYASVCNAVL---ARYGGRGLLSEAWRVFHEMGEGCRD 213
+ + +V +H G S V NA++ +R GG G+ +A ++F +M E RD
Sbjct: 128 SGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGV-RDAMKLFEKMSE--RD 184
Query: 214 EISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHG 273
+SWN+M+ + E ++A LF EM + D+ + ++L + +++ +
Sbjct: 185 TVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFE 240
Query: 274 RMI-KSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEP--DLVLWNTMISGFSQH 330
+M ++ +W S ++ YSK M M F+++ P ++V W +I+G+++
Sbjct: 241 KMPERNTVSW-----STMVMGYSKAGDMEMARVM--FDKMPLPAKNVVTWTIIIAGYAEK 293
Query: 331 EDLSE-DALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRV 389
L E D L+ M +G + D + + +AC+ SLG ++H++ +S++ SN
Sbjct: 294 GLLKEADRLV--DQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSN-A 350
Query: 390 SVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQE 449
V NAL+ MY+KCGNL A VF+ +P+ + VS N+M+ G HG E+++LF M +E
Sbjct: 351 YVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRRE 410
Query: 450 DIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEE 509
I P+ +TFI+VL +C H G ++EG YF M++ + + P+ +H+ C+VDLLGR G+L+E
Sbjct: 411 GIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKE 470
Query: 510 AERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYAS 569
A ++++TMP +P + W ALLGACR H V++A + + ++L+P + Y +LSN+YA+
Sbjct: 471 AIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAA 530
Query: 570 AGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEML 627
A WE A ++ M+ GV+K G S +++++ +H F D SHP +I++ +G ++
Sbjct: 531 AEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLI 588
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 195/453 (43%), Gaps = 44/453 (9%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLD--NARTSFR 75
T+ LLK C Q + K +H K + Y+ N YS+CG L +A F
Sbjct: 119 TYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFE 178
Query: 76 LTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRL 135
+ + S+N+++ VK L AR LFDE+P+ D++S+NT++ +A E A L
Sbjct: 179 KMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFEL 238
Query: 136 FKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
F++ E + G KA ++ VM
Sbjct: 239 FEKMPERNTVSWSTMVMGYSKAGDMEMARVM----------------------------- 269
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
F +M ++ ++W +I + KEA L +MV G+K D + S+
Sbjct: 270 --------FDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISI 321
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEP 315
L A T L+ GM+ H + +S N +V + L+DMY+KC + VF +I +
Sbjct: 322 LAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCG--NLKKAFDVFNDIPKK 379
Query: 316 DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQV 375
DLV WNTM+ G H ++A+ F M+R G RPD +F V +C++ G
Sbjct: 380 DLVSWNTMLHGLGVHGH-GKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDY 438
Query: 376 HALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP-EHNTVSLNSMITGYAQHG 434
K +V LV + + G L +A +V TMP E N V +++ H
Sbjct: 439 FYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHN 498
Query: 435 VEGESLQLFELMMQEDIV-PNNITFISVLSACA 466
+ ++ + +++ D P N + +S + A A
Sbjct: 499 EVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAA 531
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 143/288 (49%), Gaps = 24/288 (8%)
Query: 270 QFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQ 329
Q H ++I+ + + H+ LI S C + ++VF ++ EP++ L N++I +Q
Sbjct: 37 QLHAQIIRRNLHEDLHIAPKLISALSLCRQTNL--AVRVFNQVQEPNVHLCNSLIRAHAQ 94
Query: 330 HEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVH----ALAIKSDIP 385
+ + A F +MQR G D+ ++ + ACS S + K +H L + SDI
Sbjct: 95 NSQPYQ-AFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDI- 152
Query: 386 SNRVSVNNALVAMYSKCGNL--HDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLF 443
V NAL+ YS+CG L DA ++F+ M E +TVS NSM+ G + G ++ +LF
Sbjct: 153 ----YVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLF 208
Query: 444 ELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGR 503
+ M Q D+ I++ ++L A ++ + + F M E+ + +S MV +
Sbjct: 209 DEMPQRDL----ISWNTMLDGYARCREMSKAFELFEKMPERNTVS-----WSTMVMGYSK 259
Query: 504 AGKLEEAERIIETMPFDPGS-IEWAALLGACRKHGNVELAVKAANKFL 550
AG +E A + + MP + + W ++ + G ++ A + ++ +
Sbjct: 260 AGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMV 307
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 95/197 (48%), Gaps = 20/197 (10%)
Query: 363 CSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVS 422
C+NL+ KQ+HA I+ ++ + + + L++ S C + A RVF+ + E N
Sbjct: 29 CANLNQV---KQLHAQIIRRNLHED-LHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHL 84
Query: 423 LNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMK 482
NS+I +AQ+ ++ +F M + + +N T+ +L AC+ GQ + ++K
Sbjct: 85 CNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACS-------GQSWLPVVK 137
Query: 483 ------EKFGIEPEAKHFSCMVDLLGRAGKL--EEAERIIETMPFDPGSIEWAALLGACR 534
EK G+ + + ++D R G L +A ++ E M + ++ W ++LG
Sbjct: 138 MMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS-ERDTVSWNSMLGGLV 196
Query: 535 KHGNVELAVKAANKFLQ 551
K G + A + ++ Q
Sbjct: 197 KAGELRDARRLFDEMPQ 213
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 7/203 (3%)
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
N + NA++D K +L A ++F++IP+ D+VS+NT++ G A+ LF R
Sbjct: 349 NAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMR 408
Query: 141 EAGLCLDGFTLSGVIKACREDVGLVMQ--LHCFAVLCGYSCYASV--CNAVLARYGGRGL 196
G+ D T V+ +C GL+ + + +++ Y V ++ G G
Sbjct: 409 REGIRPDKVTFIAVLCSCNH-AGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGR 467
Query: 197 LSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVL 256
L EA +V M + + W A++ AC E A + +V++ D + +
Sbjct: 468 LKEAIKVVQTMPME-PNVVIWGALLGACRMHNEVDIAKEVLDNLVKLD-PCDPGNYSLLS 525
Query: 257 TAFTCLEDLAGGMQFHGRMIKSG 279
+ ED G +M G
Sbjct: 526 NIYAAAEDWEGVADIRSKMKSMG 548
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 299 bits (766), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 182/577 (31%), Positives = 300/577 (51%), Gaps = 42/577 (7%)
Query: 97 HLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIK 156
H+ A +LF +IP PD+V +N +I + G VRL+ + G+ D T ++
Sbjct: 83 HVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLN 142
Query: 157 ACREDVGLVM---QLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRD 213
+ D G + +LHC V G V NA++ Y GL+ A VF C++
Sbjct: 143 GLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRR---CKE 199
Query: 214 EI-SWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFH 272
++ SWN MI + +E +E++ L EM R + T+ VL+A + ++D + H
Sbjct: 200 DVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVH 259
Query: 273 GRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD-CMKVFEEISEPDLVLWNTMISGFSQHE 331
+ + + + + L++ Y+ C G +D +++F + D++ W +++ G+ +
Sbjct: 260 EYVSECKTEPSLRLENALVNAYAAC---GEMDIAVRIFRSMKARDVISWTSIVKGYVERG 316
Query: 332 DLS------------------------------EDALICFQDMQRAGFRPDDCSFSCVTS 361
+L ++L F++MQ AG PD+ + V +
Sbjct: 317 NLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLT 376
Query: 362 ACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTV 421
AC++L S +G+ + K+ I N V V NAL+ MY KCG A++VF M + +
Sbjct: 377 ACAHLGSLEIGEWIKTYIDKNKI-KNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKF 435
Query: 422 SLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMM 481
+ +M+ G A +G E++++F M I P++IT++ VLSAC H+G V++ +K+F M
Sbjct: 436 TWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKM 495
Query: 482 KEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVEL 541
+ IEP H+ CMVD+LGRAG ++EA I+ MP +P SI W ALLGA R H + +
Sbjct: 496 RSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPM 555
Query: 542 AVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDN 601
A AA K L+LEP N Y +L N+YA RW++ V+R + + +KK PG S I+++
Sbjct: 556 AELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNG 615
Query: 602 KVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPD 638
H FVA D SH +EI+ + E+ ++ A Y+PD
Sbjct: 616 FAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPD 652
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 197/431 (45%), Gaps = 53/431 (12%)
Query: 167 QLHCFAVLCGYSCYASVCNAVLARYGGR--GLLSEAWRVFHEMGEGCRDEISWNAMIVAC 224
QLH ++ G + + + + R G +S A+++F ++ E D + WN MI
Sbjct: 52 QLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEP--DVVVWNNMIKGW 109
Query: 225 GQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLED---LAGGMQFHGRMIKSGFN 281
+ E + L+ M++ G+ D T +L D LA G + H ++K G
Sbjct: 110 SKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLK--RDGGALACGKKLHCHVVKFGLG 167
Query: 282 WNPHVGSGLIDMYSKCAPRGMLDCMK-VFEEISEPDLVLWNTMISGFSQHEDLSEDALIC 340
N +V + L+ MYS C G++D + VF+ + D+ WN MISG+++ ++ E+++
Sbjct: 168 SNLYVQNALVKMYSLC---GLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEY-EESIEL 223
Query: 341 FQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDI-PSNRVSVNNALVAMY 399
+M+R P + V SACS + L K+VH + PS R+ NALV Y
Sbjct: 224 LVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLE--NALVNAY 281
Query: 400 SKCG-------------------------------NLHDARRVFDTMPEHNTVSLNSMIT 428
+ CG NL AR FD MP + +S MI
Sbjct: 282 AACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMID 341
Query: 429 GYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIE 488
GY + G ESL++F M ++P+ T +SVL+ACAH G +E G+ + +K I+
Sbjct: 342 GYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGE-WIKTYIDKNKIK 400
Query: 489 PEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANK 548
+ + ++D+ + G E+A+++ M W A++ +G + A+K
Sbjct: 401 NDVVVGNALIDMYFKCGCSEKAQKVFHDMD-QRDKFTWTAMVVGLANNGQGQEAIKV--- 456
Query: 549 FLQLEPHNAVP 559
F Q++ + P
Sbjct: 457 FFQMQDMSIQP 467
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 175/433 (40%), Gaps = 77/433 (17%)
Query: 32 ISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAIIDA 91
++ GK LH +K + + Y+ N +YS CG +D
Sbjct: 151 LACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMD----------------------- 187
Query: 92 CVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTL 151
+AR +FD + D+ S+N +I+ + E+ ++ L E + TL
Sbjct: 188 --------MARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTL 239
Query: 152 SGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGE 209
V+ AC +D L ++H + C + NA++ Y G + A R+F M
Sbjct: 240 LLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKA 299
Query: 210 -----------------------------GCRDEISWNAMIVACGQCREG--KEALVLFG 238
RD ISW MI G R G E+L +F
Sbjct: 300 RDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMI--DGYLRAGCFNESLEIFR 357
Query: 239 EMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCA 298
EM GM D FTM SVLTA L L G + K+ + VG+ LIDMY KC
Sbjct: 358 EMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCG 417
Query: 299 PRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSC 358
KVF ++ + D W M+ G + + ++A+ F MQ +PDD ++
Sbjct: 418 CSE--KAQKVFHDMDQRDKFTWTAMVVGLANNGQ-GQEAIKVFFQMQDMSIQPDDITYLG 474
Query: 359 VTSACSNLSSPSLGKQVHALAIKSD--IPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP 416
V SAC++ ++ A ++SD I + V +V M + G + +A + MP
Sbjct: 475 VLSACNHSGMVDQARKFFA-KMRSDHRIEPSLVHY-GCMVDMLGRAGLVKEAYEILRKMP 532
Query: 417 EHNTVSLNSMITG 429
++ NS++ G
Sbjct: 533 ----MNPNSIVWG 541
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 147/322 (45%), Gaps = 14/322 (4%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T +L C +D K +H + S L N Y+ CG +D A FR
Sbjct: 238 TLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSM 297
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+V S+ +I+ V+ +L LAR FD++P D +S+ +I + G ++ +F+
Sbjct: 298 KARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFR 357
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVM--QLHCFAVLCGYSCYASVCNAVLARYGGRG 195
E + AG+ D FT+ V+ AC L + + + V NA++ Y G
Sbjct: 358 EMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCG 417
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
+A +VFH+M + RD+ +W AM+V +G+EA+ +F +M M ++ D T V
Sbjct: 418 CSEKAQKVFHDMDQ--RDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGV 475
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNP---HVGSGLIDMYSKCAPRGML-DCMKVFEE 311
L+A + +F +M +S P H G ++DM + G++ + ++ +
Sbjct: 476 LSACNHSGMVDQARKFFAKM-RSDHRIEPSLVHYGC-MVDMLGRA---GLVKEAYEILRK 530
Query: 312 IS-EPDLVLWNTMISGFSQHED 332
+ P+ ++W ++ H D
Sbjct: 531 MPMNPNSIVWGALLGASRLHND 552
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 299 bits (765), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 191/650 (29%), Positives = 328/650 (50%), Gaps = 25/650 (3%)
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
NV +++D + S + A + + D+ + ++++ AV F E R
Sbjct: 258 NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMR 317
Query: 141 EAGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGG-RGLL 197
GL + FT S ++ C + Q+H + G+ V NA++ Y
Sbjct: 318 SLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASE 377
Query: 198 SEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLT 257
EA RVF M + +SW +I+ ++ L EMV+ ++ ++ T++ VL
Sbjct: 378 VEASRVFGAMVSP--NVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLR 435
Query: 258 AFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDL 317
A + L + ++ H +++ + VG+ L+D Y+ + R + V + D
Sbjct: 436 ACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYA--SSRKVDYAWNVIRSMKRRDN 493
Query: 318 VLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHA 377
+ + ++++ F++ E AL M G R D S SA +NL + GK +H
Sbjct: 494 ITYTSLVTRFNELGK-HEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHC 552
Query: 378 LAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEG 437
++KS S SV N+LV MYSKCG+L DA++VF+ + + VS N +++G A +G
Sbjct: 553 YSVKSGF-SGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFIS 611
Query: 438 ESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCM 497
+L FE M ++ P+++TF+ +LSAC++ + G +YF +MK+ + IEP+ +H+ +
Sbjct: 612 SALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHL 671
Query: 498 VDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNA 557
V +LGRAG+LEEA ++ETM P ++ + LL ACR GN+ L ANK L L P +
Sbjct: 672 VGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDP 731
Query: 558 VPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSH-PMI 616
Y++L+++Y +G+ E + + LM E+ + KK G S +++ KVH FV+ED +
Sbjct: 732 ALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKT 791
Query: 617 KEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKE 676
I+ + + ++K+ G + +HS K AV +G I
Sbjct: 792 NGIYAEIESIKEEIKRFG---------------SPYRGNENASFHSAKQAVVYGFIYASP 836
Query: 677 GVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCK 726
P+ VVKN +C DCH + +++ + ++ITVRD ++ H FK G CSCK
Sbjct: 837 EAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSCK 886
Score = 182 bits (461), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 230/468 (49%), Gaps = 18/468 (3%)
Query: 86 NAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLC 145
N ++ +K + AR+LFDE+ + ++ +I+A E A+ LF+E +G
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTH 121
Query: 146 LDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRV 203
+ FT S V+++C D+ ++H + G+ + V +++ Y G EA +
Sbjct: 122 PNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACEL 181
Query: 204 FHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLE 263
F + D ISW MI + R+ +EAL + EMV+ G+ + FT +L A + L
Sbjct: 182 FSSLQNA--DTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL- 238
Query: 264 DLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTM 323
L G H +I G N + + L+D YS+ + M D ++V E D+ LW ++
Sbjct: 239 GLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSK--MEDAVRVLNSSGEQDVFLWTSV 296
Query: 324 ISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSD 383
+SGF ++ +++A+ F +M+ G +P++ ++S + S CS + S GKQ+H+ IK
Sbjct: 297 VSGFVRNLR-AKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVG 355
Query: 384 IPSNRVSVNNALVAMYSKCGNLH-DARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQL 442
+ V NALV MY KC +A RVF M N VS ++I G HG + L
Sbjct: 356 FE-DSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGL 414
Query: 443 FELMMQEDIVPNNITFISVLSACA---HTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVD 499
M++ ++ PN +T VL AC+ H +V E Y +++ ++ E + +VD
Sbjct: 415 LMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAY--LLRRH--VDGEMVVGNSLVD 470
Query: 500 LLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAAN 547
+ K++ A +I +M +I + +L+ + G E+A+ N
Sbjct: 471 AYASSRKVDYAWNVIRSMK-RRDNITYTSLVTRFNELGKHEMALSVIN 517
Score = 172 bits (437), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 133/551 (24%), Positives = 250/551 (45%), Gaps = 43/551 (7%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF+++++ C RDIS G +H IKT ++ + + + LYSKCG
Sbjct: 126 TFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFK--------- 176
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+AC ELF + D +S+ +I++ + A++ +
Sbjct: 177 ------------EAC----------ELFSSLQNADTISWTMMISSLVGARKWREALQFYS 214
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVM--QLHCFAVLCGYSCYASVCNAVLARYGGRG 195
E +AG+ + FT ++ A +GL +H ++ G + +++ Y
Sbjct: 215 EMVKAGVPPNEFTFVKLLGAS-SFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFS 273
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
+ +A RV + GE +D W +++ + KEA+ F EM +G++ + FT +++
Sbjct: 274 KMEDAVRVLNSSGE--QDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAI 331
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEP 315
L+ + + L G Q H + IK GF + VG+ L+DMY KC+ ++ +VF + P
Sbjct: 332 LSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSA-SEVEASRVFGAMVSP 390
Query: 316 DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQV 375
++V W T+I G H +D +M + P+ + S V ACS L ++
Sbjct: 391 NVVSWTTLILGLVDH-GFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEI 449
Query: 376 HALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGV 435
HA ++ + V V N+LV Y+ + A V +M + ++ S++T + + G
Sbjct: 450 HAYLLRRHVDGEMV-VGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGK 508
Query: 436 EGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFS 495
+L + M + I + ++ +SA A+ G +E G K+ + K G A +
Sbjct: 509 HEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETG-KHLHCYSVKSGFSGAASVLN 567
Query: 496 CMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAAN--KFLQLE 553
+VD+ + G LE+A+++ E + P + W L+ +G + A+ A + + E
Sbjct: 568 SLVDMYSKCGSLEDAKKVFEEIA-TPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETE 626
Query: 554 PHNAVPYVMLS 564
P + ++LS
Sbjct: 627 PDSVTFLILLS 637
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 179/376 (47%), Gaps = 10/376 (2%)
Query: 166 MQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACG 225
+ +HC + G +CN +L+ Y + A ++F EM R +W MI A
Sbjct: 43 LHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSH--RTVFAWTVMISAFT 100
Query: 226 QCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPH 285
+ +E AL LF EM+ G + FT +SV+ + L D++ G + HG +IK+GF N
Sbjct: 101 KSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSV 160
Query: 286 VGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQ 345
VGS L D+YSKC + ++F + D + W MIS E AL + +M
Sbjct: 161 VGSSLSDLYSKCGQ--FKEACELFSSLQNADTISWTMMISSLVGARKWRE-ALQFYSEMV 217
Query: 346 RAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNL 405
+AG P++ +F + A S L GK +H+ I IP N V + +LV YS+ +
Sbjct: 218 KAGVPPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPLN-VVLKTSLVDFYSQFSKM 275
Query: 406 HDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSAC 465
DA RV ++ E + S+++G+ ++ E++ F M + PNN T+ ++LS C
Sbjct: 276 EDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLC 335
Query: 466 AHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLE-EAERIIETMPFDPGSI 524
+ ++ G K + K G E + +VD+ + E EA R+ M P +
Sbjct: 336 SAVRSLDFG-KQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAM-VSPNVV 393
Query: 525 EWAALLGACRKHGNVE 540
W L+ HG V+
Sbjct: 394 SWTTLILGLVDHGFVQ 409
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 32 ISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAIIDA 91
+ TGK LH +K+ + + N +YSKCG+L++A+ F P+V S+N ++
Sbjct: 544 LETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSG 603
Query: 92 CVKHSHLHLARELFDEI----PRPDIVSYNTLIAA 122
+ + A F+E+ PD V++ L++A
Sbjct: 604 LASNGFISSALSAFEEMRMKETEPDSVTFLILLSA 638
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 299 bits (765), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 179/524 (34%), Positives = 291/524 (55%), Gaps = 19/524 (3%)
Query: 86 NAIIDACVKHSHLHLARELFDEIP--RPDIVSYNTLIAAHAHRGE--HGPAVRLFKEARE 141
+++ +A ++ + L A F+ IP + + S+NT+++ ++ + + L+ R
Sbjct: 43 SSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRR 102
Query: 142 AGLCLDGFTLSGVIKACREDVGLV---MQLHCFAVLCGYSCYASVCNAVLARYGGRGLLS 198
+D F L IKAC +GL+ + +H A+ G V +++ Y G +
Sbjct: 103 HCDGVDSFNLVFAIKAC-VGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTME 161
Query: 199 EAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTA 258
A +VF E+ R+ + W ++ + + E LF M G+ +D T+ ++ A
Sbjct: 162 SAQKVFDEIP--VRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKA 219
Query: 259 FTCLEDLAG--GMQFHGRMIKSGF-NWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEP 315
C AG G HG I+ F + + ++ + +IDMY KC R + + K+FE +
Sbjct: 220 --CGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKC--RLLDNARKLFETSVDR 275
Query: 316 DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQV 375
++V+W T+ISGF++ E E A F+ M R P+ C+ + + +CS+L S GK V
Sbjct: 276 NVVMWTTLISGFAKCERAVE-AFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSV 334
Query: 376 HALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGV 435
H I++ I + V+ + + MY++CGN+ AR VFD MPE N +S +SMI + +G+
Sbjct: 335 HGYMIRNGIEMDAVNFT-SFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGL 393
Query: 436 EGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFS 495
E+L F M +++VPN++TF+S+LSAC+H+G V+EG K F M +G+ PE +H++
Sbjct: 394 FEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYA 453
Query: 496 CMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPH 555
CMVDLLGRAG++ EA+ I+ MP P + W ALL ACR H V+LA + A K L +EP
Sbjct: 454 CMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPE 513
Query: 556 NAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQI 599
+ YV+LSN+YA AG WE V+R M +G +K G S ++
Sbjct: 514 KSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 142/310 (45%), Gaps = 12/310 (3%)
Query: 254 SVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD-CMKVFEEI 312
++LT + + L Q H ++I GF +GS L + Y + LD F I
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQ---SNRLDFATSSFNRI 65
Query: 313 S--EPDLVLWNTMISGFSQHEDLS-EDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSP 369
+ + WNT++SG+S+ + D L+ + M+R D + AC L
Sbjct: 66 PCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLL 125
Query: 370 SLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITG 429
G +H LA+K+ + + V +LV MY++ G + A++VFD +P N+V ++ G
Sbjct: 126 ENGILIHGLAMKNGLDKDDY-VAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKG 184
Query: 430 YAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEP 489
Y ++ + E +LF LM + + +T I ++ AC + + G+ + + I+
Sbjct: 185 YLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQ 244
Query: 490 EAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKF 549
+ ++D+ + L+ A ++ ET D + W L+ K E AV+A + F
Sbjct: 245 SDYLQASIIDMYVKCRLLDNARKLFET-SVDRNVVMWTTLISGFAK---CERAVEAFDLF 300
Query: 550 LQLEPHNAVP 559
Q+ + +P
Sbjct: 301 RQMLRESILP 310
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 99/241 (41%), Gaps = 27/241 (11%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIK-TFIPHSTYLSNHFTLLYSKCGTLDNARTSFRL 76
T L+K C + GK +H + I+ +FI S YL +Y KC LDNAR F
Sbjct: 212 TLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFET 271
Query: 77 TNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDI-----------VSYNTLIAAHAH 125
+ + NV + +I K A +LF ++ R I VS ++L +
Sbjct: 272 SVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHG 331
Query: 126 RGEHGPAVRLFKEAREAGLC--LDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASV 183
+ HG +R E +D + G I+ R ++ + + + ++S+
Sbjct: 332 KSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVIS-------WSSM 384
Query: 184 CNAVLARYGGRGLLSEAWRVFHEMGEG--CRDEISWNAMIVACGQCREGKEALVLFGEMV 241
NA +G GL EA FH+M + +++ +++ AC KE F M
Sbjct: 385 INA----FGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMT 440
Query: 242 R 242
R
Sbjct: 441 R 441
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 298 bits (764), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 166/496 (33%), Positives = 277/496 (55%), Gaps = 42/496 (8%)
Query: 167 QLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQ 226
Q HC+ ++ G + + G L A+ VF + C + N MI A
Sbjct: 33 QSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTH--QPCPNTYLHNTMIRALSL 90
Query: 227 CREGKE---ALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWN 283
E A+ ++ ++ + K D FT VL + D+ G Q HG+++ GF+ +
Sbjct: 91 LDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSS 150
Query: 284 PHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSE-------- 335
HV +GLI MY C G+ D K+F+E+ D+ +WN +++G+ + ++ E
Sbjct: 151 VHVVTGLIQMYFSCG--GLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMM 208
Query: 336 ------------------------DALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSL 371
+A+ FQ M PD+ + V SAC++L S L
Sbjct: 209 PCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLEL 268
Query: 372 GKQVHALAIKSDIPSNR-VSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGY 430
G+++ + + NR VS+NNA++ MY+K GN+ A VF+ + E N V+ ++I G
Sbjct: 269 GERICSYVDHRGM--NRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGL 326
Query: 431 AQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPE 490
A HG E+L +F M++ + PN++TFI++LSAC+H G V+ G++ FN M+ K+GI P
Sbjct: 327 ATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPN 386
Query: 491 AKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFL 550
+H+ CM+DLLGRAGKL EA+ +I++MPF + W +LL A H ++EL +A ++ +
Sbjct: 387 IEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELI 446
Query: 551 QLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAED 610
+LEP+N+ Y++L+N+Y++ GRW+ES ++ +M+ GVKK G S I+++N+V+ F++ D
Sbjct: 447 KLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGD 506
Query: 611 SSHPMIKEIHEYMGEM 626
+HP ++ IHE + EM
Sbjct: 507 LTHPQVERIHEILQEM 522
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 211/462 (45%), Gaps = 51/462 (11%)
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGE---HGPAVR 134
+N NV + I+AC HL A +F P P+ +NT+I A + E H A+
Sbjct: 46 DNLNVAKF---IEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAIT 102
Query: 135 LFKEAREAGLCLDGFTLSGVIK-ACR-EDVGLVMQLHCFAVLCG---------------Y 177
++++ D FT V+K A R DV Q+H V+ G +
Sbjct: 103 VYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYF 162
Query: 178 SCYA----------------SVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMI 221
SC +V NA+LA YG G + EA + M R+E+SW +I
Sbjct: 163 SCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVI 222
Query: 222 VACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFN 281
+ EA+ +F M+ ++ D T+ +VL+A L L G + + G N
Sbjct: 223 SGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMN 282
Query: 282 WNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICF 341
+ + +IDMY+K + + VFE ++E ++V W T+I+G + H +E AL F
Sbjct: 283 RAVSLNNAVIDMYAKSG--NITKALDVFECVNERNVVTWTTIIAGLATHGHGAE-ALAMF 339
Query: 342 QDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQV-HALAIKSDIPSNRVSVNNALVAMYS 400
M +AG RP+D +F + SACS++ LGK++ +++ K I N + ++ +
Sbjct: 340 NRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPN-IEHYGCMIDLLG 398
Query: 401 KCGNLHDARRVFDTMP-EHNTVSLNSMITGY-AQHGVEGESLQLFELMMQEDIVPNNI-T 457
+ G L +A V +MP + N S++ H +E L EL+ E PNN
Sbjct: 399 RAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLE---PNNSGN 455
Query: 458 FISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVD 499
++ + + ++ G+ +E + NMMK G++ A S V+
Sbjct: 456 YMLLANLYSNLGRWDESRMMRNMMK-GIGVKKMAGESSIEVE 496
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 149/328 (45%), Gaps = 22/328 (6%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF +LK + D+ G+ +H + S ++ +Y CG L +AR F
Sbjct: 118 TFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEM 177
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIP--RPDIVSYNTLIAAHAHRGEHGPAVRL 135
+V +NA++ K + AR L + +P + VS+ +I+ +A G A+ +
Sbjct: 178 LVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEV 237
Query: 136 FKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCY------ASVCNAVLA 189
F+ + D TL V+ AC D+G L +C Y + S+ NAV+
Sbjct: 238 FQRMLMENVEPDEVTLLAVLSAC-ADLG---SLELGERICSYVDHRGMNRAVSLNNAVID 293
Query: 190 RYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDM 249
Y G +++A VF + E R+ ++W +I G EAL +F MV+ G++ +
Sbjct: 294 MYAKSGNITKALDVFECVNE--RNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPND 351
Query: 250 FTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNP---HVGSGLIDMYSKCAPRGMLDCM 306
T ++L+A + + + G + M +S + +P H G +ID+ + + +
Sbjct: 352 VTFIAILSACSHVGWVDLGKRLFNSM-RSKYGIHPNIEHYGC-MIDLLGRAGK--LREAD 407
Query: 307 KVFEEIS-EPDLVLWNTMISGFSQHEDL 333
+V + + + + +W ++++ + H DL
Sbjct: 408 EVIKSMPFKANAAIWGSLLAASNVHHDL 435
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 193/620 (31%), Positives = 309/620 (49%), Gaps = 51/620 (8%)
Query: 23 LKQCISQRDISTGKSLHALYIKTFIPHST-YLSNHFTLLYSKCGTLDNARTSFRLTNNPN 81
LK C R+++ G+ +H K S Y+ + +Y KCG + A
Sbjct: 67 LKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEAL---------- 116
Query: 82 VFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEARE 141
+FDE+ +PDIV+++++++ G AV F+
Sbjct: 117 ---------------------RMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVM 155
Query: 142 AG-LCLDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLS 198
A + D TL ++ AC + + L +H F + G+S S+ N++L Y
Sbjct: 156 ASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFK 215
Query: 199 EAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTA 258
EA +F + E +D ISW+ +I Q EAL++F +M+ G + ++ T+ VL A
Sbjct: 216 EAVNLFKMIAE--KDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQA 273
Query: 259 FTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKC-APRGMLDCMKVFEEISEPDL 317
DL G + H I+ G V + L+DMY KC +P + VF I D+
Sbjct: 274 CAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPE---EAYAVFSRIPRKDV 330
Query: 318 VLWNTMISGFS----QHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGK 373
V W +ISGF+ H + E +++ ++ RPD V +CS L K
Sbjct: 331 VSWVALISGFTLNGMAHRSIEEFSIMLLEN----NTRPDAILMVKVLGSCSELGFLEQAK 386
Query: 374 QVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQH 433
H+ IK SN + +LV +YS+CG+L +A +VF+ + +TV S+ITGY H
Sbjct: 387 CFHSYVIKYGFDSNPF-IGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIH 445
Query: 434 GVEGESLQLFELMMQE-DIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAK 492
G ++L+ F M++ ++ PN +TF+S+LSAC+H G + EG + F +M + + P +
Sbjct: 446 GKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLE 505
Query: 493 HFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQL 552
H++ +VDLLGR G L+ A I + MPF P LLGACR H N E+A A K +L
Sbjct: 506 HYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFEL 565
Query: 553 EPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSS 612
E ++A Y+++SN+Y G WE ++ +++RG+KK S I+I KVH FVA+D
Sbjct: 566 ESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDEL 625
Query: 613 HPMIKEIHEYMGEMLRKMKQ 632
HP + ++ + E+ MK+
Sbjct: 626 HPEKEPVYGLLKELDLHMKE 645
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 133/502 (26%), Positives = 249/502 (49%), Gaps = 21/502 (4%)
Query: 92 CVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTL 151
C K S AR++F E+ + + +NTL+ + + + + F D FTL
Sbjct: 4 CRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTL 63
Query: 152 SGVIKACRE--DVGLVMQLHCFA---VLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHE 206
+KAC E +V +H F V G Y V ++++ Y G + EA R+F E
Sbjct: 64 PVALKACGELREVNYGEMIHGFVKKDVTLGSDLY--VGSSLIYMYIKCGRMIEALRMFDE 121
Query: 207 MGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMG-MKIDMFTMASVLTAFTCLEDL 265
+ + D ++W++M+ + +A+ F MV + D T+ ++++A T L +
Sbjct: 122 LEKP--DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNS 179
Query: 266 AGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMIS 325
G HG +I+ GF+ + + + L++ Y+K R + + +F+ I+E D++ W+T+I+
Sbjct: 180 RLGRCVHGFVIRRGFSNDLSLVNSLLNCYAK--SRAFKEAVNLFKMIAEKDVISWSTVIA 237
Query: 326 GFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIP 385
+ Q+ +E AL+ F DM G P+ + CV AC+ G++ H LAI+ +
Sbjct: 238 CYVQNGAAAE-ALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLE 296
Query: 386 SNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFEL 445
+ V V+ ALV MY KC + +A VF +P + VS ++I+G+ +G+ S++ F +
Sbjct: 297 T-EVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSI 355
Query: 446 MMQE-DIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRA 504
M+ E + P+ I + VL +C+ G +E+ K F+ K+G + + +V+L R
Sbjct: 356 MLLENNTRPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRC 414
Query: 505 GKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFL---QLEPHNAVPYV 561
G L A ++ + ++ W +L+ HG A++ N + +++P N V ++
Sbjct: 415 GSLGNASKVFNGIALKD-TVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKP-NEVTFL 472
Query: 562 MLSNMYASAGRWEESATVKRLM 583
+ + + AG E + +LM
Sbjct: 473 SILSACSHAGLIHEGLRIFKLM 494
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 148/312 (47%), Gaps = 7/312 (2%)
Query: 303 LDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSA 362
+D ++F E+++ L WNT++ S+ E E+ L F M R +PD+ + A
Sbjct: 11 VDARQMFGEMTKRSLYQWNTLLKSLSR-EKQWEEVLYHFSHMFRDEEKPDNFTLPVALKA 69
Query: 363 CSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVS 422
C L + G+ +H K + + V ++L+ MY KCG + +A R+FD + + + V+
Sbjct: 70 CGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVT 129
Query: 423 LNSMITGYAQHGVEGESLQLFELM-MQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMM 481
+SM++G+ ++G ++++ F M M D+ P+ +T I+++SAC G+ +
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 189
Query: 482 KEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVEL 541
+ G + + +++ ++ +EA + + M + I W+ ++ ++G
Sbjct: 190 IRR-GFSNDLSLVNSLLNCYAKSRAFKEAVNLFK-MIAEKDVISWSTVIACYVQNGAAAE 247
Query: 542 AVKAANKFLQ--LEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQI 599
A+ N + EP+ A +L A+A E+ L +G++ + S +
Sbjct: 248 ALLVFNDMMDDGTEPNVATVLCVLQAC-AAAHDLEQGRKTHELAIRKGLETEVKVSTALV 306
Query: 600 DNKVHVFVAEDS 611
D + F E++
Sbjct: 307 DMYMKCFSPEEA 318
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 183/613 (29%), Positives = 299/613 (48%), Gaps = 73/613 (11%)
Query: 89 IDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDG 148
I + K + AR++FD +P D V++NT++ +++ G H A+ LF + R + D
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 149 FTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHE 206
++ + ++ C +V ++ + G+ V N+++ YG A +VF +
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRD 130
Query: 207 MGEGCRDEISW-------------------------------NAMIVACGQCREGKEALV 235
M R+E++W N MI C + + L
Sbjct: 131 MCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLS 190
Query: 236 LFGEMVRMGMKIDMFTMASVLTAFTCLEDLAG---GMQFHGRMIKSGFNWNPHVGSGLID 292
LF EM+ K D +T +S++ A C D + G H M+K+G++ + ++
Sbjct: 191 LFKEMLESEFKPDCYTFSSLMNA--CSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLS 248
Query: 293 MYSKCAPR-------------------GMLD-CMK---------VFEEISEPDLVLWNTM 323
Y+K R ++D CMK VF E ++V W TM
Sbjct: 249 FYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTM 308
Query: 324 ISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSD 383
I+G+ ++ D E AL F +M ++G D ++ V ACS L+ GK +H I
Sbjct: 309 ITGYGRNGD-GEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCG 367
Query: 384 IPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLF 443
V NALV +Y+KCG++ +A R F + + VS N+M+ + HG+ ++L+L+
Sbjct: 368 F-QGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLY 426
Query: 444 ELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGR 503
+ M+ I P+N+TFI +L+ C+H+G VEEG F M + + I E H +CM+D+ GR
Sbjct: 427 DNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGR 486
Query: 504 AGKLEEAERIIET----MPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVP 559
G L EA+ + T + + W LLGAC H + EL + + EP +
Sbjct: 487 GGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMS 546
Query: 560 YVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEI 619
+V+LSN+Y S GRW+E V+R M ERG+KK PGCSWI++ N+V FV DSSHP ++E+
Sbjct: 547 FVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEEL 606
Query: 620 HEYMGEMLRKMKQ 632
E + + +M+
Sbjct: 607 SETLNCLQHEMRN 619
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 133/537 (24%), Positives = 238/537 (44%), Gaps = 75/537 (13%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFR-- 75
+FT +L C S ++ G+ + +L I++ S ++N +Y KC +A FR
Sbjct: 72 SFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDM 131
Query: 76 LTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRL 135
++ N ++ +++ A + A ++F E+P+ ++N +I+ HAH G+ + L
Sbjct: 132 CCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSL 191
Query: 136 FKEAREAGLCLDGFTLSGVIKACREDVGLVM---QLHCFAVLCGYSCYASVCNAVLARYG 192
FKE E+ D +T S ++ AC D V+ +H + G+S N+VL+ Y
Sbjct: 192 FKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYT 251
Query: 193 GRGLLSEAWR-------------------------------VFHEMGEGCRDEISWNAMI 221
G +A R VFH E ++ ++W MI
Sbjct: 252 KLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPE--KNIVTWTTMI 309
Query: 222 VACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFN 281
G+ +G++AL F EM++ G+ D F +VL A + L L G HG +I GF
Sbjct: 310 TGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQ 369
Query: 282 WNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICF 341
+VG+ L+++Y+KC D + F +I+ DLV WNTM+ F H L++ AL +
Sbjct: 370 GYAYVGNALVNLYAKCGDIKEAD--RAFGDIANKDLVSWNTMLFAFGVH-GLADQALKLY 426
Query: 342 QDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSK 401
+M +G +PD+ +F + + CS+ G + +K V ++ M+ +
Sbjct: 427 DNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGR 486
Query: 402 CGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISV 461
G+L +A+ + T +S++T + NN ++ ++
Sbjct: 487 GGHLAEAKDLATT--------YSSLVTDSS----------------------NNSSWETL 516
Query: 462 LSACAHTGKVEEGQKYFNMMKEKFGIEP-EAKHFSCMVDLLGRAGKLEEAERIIETM 517
L AC+ E G++ ++K EP E F + +L G+ +E E + M
Sbjct: 517 LGACSTHWHTELGREVSKVLKIA---EPSEEMSFVLLSNLYCSTGRWKEGEDVRREM 570
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 159/460 (34%), Positives = 262/460 (56%), Gaps = 36/460 (7%)
Query: 185 NAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMG 244
N +++ Y G+L A VF M E RD +SWN M++ Q EAL + E R G
Sbjct: 117 NNMVSGYVKSGMLVRARVVFDSMPE--RDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSG 174
Query: 245 MKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD 304
+K + F+ A +LTA L Q HG+++ +GF N + +ID Y+KC M
Sbjct: 175 IKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQ--MES 232
Query: 305 CMKVFEEISEPDLVLWNTMISGFSQHEDL-SEDALIC----------------------- 340
+ F+E++ D+ +W T+ISG+++ D+ + + L C
Sbjct: 233 AKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSG 292
Query: 341 ------FQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNA 394
F+ M G +P+ +FS A ++++S GK++H I++++ N + ++ +
Sbjct: 293 NRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVIS-S 351
Query: 395 LVAMYSKCGNLHDARRVFDTMPE-HNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVP 453
L+ MYSK G+L + RVF + H+ V N+MI+ AQHG+ ++L++ + M++ + P
Sbjct: 352 LIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQP 411
Query: 454 NNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERI 513
N T + +L+AC+H+G VEEG ++F M + GI P+ +H++C++DLLGRAG +E R
Sbjct: 412 NRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRK 471
Query: 514 IETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRW 573
IE MPF+P W A+LG CR HGN EL KAA++ ++L+P ++ PY++LS++YA G+W
Sbjct: 472 IEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKW 531
Query: 574 EESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSH 613
E ++ +M++R V K+ SWI+I+ KV F D SH
Sbjct: 532 ELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSH 571
Score = 166 bits (421), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 141/504 (27%), Positives = 237/504 (47%), Gaps = 46/504 (9%)
Query: 19 FTNLLKQCISQRDISTGKSLHA-LYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
+LL+QC + + GK +H L I F +T LSNH +Y KCG +A F
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+ N++S+N ++ VK L AR +FD +P D+VS+NT++ +A G A+ +K
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVM--QLHCFAVLCGY------SC-----YAS-- 182
E R +G+ + F+ +G++ AC + L + Q H ++ G+ SC YA
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 183 ------------------VCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVAC 224
+ +++ Y G + A ++F EM E ++ +SW A+I
Sbjct: 229 QMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPE--KNPVSWTALIAGY 286
Query: 225 GQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNP 284
+ G AL LF +M+ +G+K + FT +S L A + L G + HG MI++ N
Sbjct: 287 VRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNA 346
Query: 285 HVGSGLIDMYSKCAPRGMLDCM-KVFEEISEP-DLVLWNTMISGFSQHEDLSEDALICFQ 342
V S LIDMYSK G L+ +VF + D V WNTMIS +QH L AL
Sbjct: 347 IVISSLIDMYSKS---GSLEASERVFRICDDKHDCVFWNTMISALAQH-GLGHKALRMLD 402
Query: 343 DMQRAGFRPDDCSFSCVTSACSNLSSPSLG-KQVHALAIKSDIPSNRVSVNNALVAMYSK 401
DM + +P+ + + +ACS+ G + ++ ++ I ++ L+ + +
Sbjct: 403 DMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHY-ACLIDLLGR 461
Query: 402 CGNLHDARRVFDTMPEHNTVSLNSMITGYAQ-HGVEGESLQLFELMMQEDIVPNNITFIS 460
G + R + MP + + I G + HG E + + +++ D ++ +I
Sbjct: 462 AGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLD-PESSAPYIL 520
Query: 461 VLSACAHTGKVEEGQKYFNMMKEK 484
+ S A GK E +K +MK++
Sbjct: 521 LSSIYADHGKWELVEKLRGVMKKR 544
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 139/311 (44%), Gaps = 7/311 (2%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
+F LL C+ R + + H + + LS Y+KCG +++A+ F
Sbjct: 181 SFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEM 240
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
++ + +I K + A +LF E+P + VS+ LIA + +G A+ LF+
Sbjct: 241 TVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFR 300
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLV--MQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
+ G+ + FT S + A L ++H + + A V ++++ Y G
Sbjct: 301 KMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSG 360
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
L + RVF + + D + WN MI A Q G +AL + +M++ ++ + T+ +
Sbjct: 361 SLEASERVF-RICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVI 419
Query: 256 LTAFTCLEDLAGGMQ-FHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEIS- 313
L A + + G++ F ++ G + + LID+ + + M+ EE+
Sbjct: 420 LNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAG--CFKELMRKIEEMPF 477
Query: 314 EPDLVLWNTMI 324
EPD +WN ++
Sbjct: 478 EPDKHIWNAIL 488
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 187/582 (32%), Positives = 291/582 (50%), Gaps = 9/582 (1%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTN 78
++ +LK C DI G ++ K + L N +Y K G L A +SF+
Sbjct: 110 YSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEIL 169
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
P+ S+N +I K + A LF +P+P++VS+N LI+ +G L +
Sbjct: 170 RPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRM 229
Query: 139 AREAGLCLDGFTLSGVIKACREDVGLVM--QLHCFAVLCGYSCYASVCNAVLARYGGRGL 196
RE GL LDGF L +KAC L M QLHC V G +A++ Y G
Sbjct: 230 QRE-GLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGS 288
Query: 197 LSEAWRVFHEMGEGCRDEIS-WNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
L A VFH+ ++ WN+M+ E + AL L ++ + + D +T++
Sbjct: 289 LIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGA 348
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEP 315
L +L G+Q H ++ SG+ + VGS L+D+++ + D K+F +
Sbjct: 349 LKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVG--NIQDAHKLFHRLPNK 406
Query: 316 DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQV 375
D++ ++ +I G + + A F+++ + G D S + CS+L+S GKQ+
Sbjct: 407 DIIAFSGLIRGCVK-SGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQI 465
Query: 376 HALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGV 435
H L IK S V+ ALV MY KCG + + +FD M E + VS +I G+ Q+G
Sbjct: 466 HGLCIKKGYESEPVTAT-ALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGR 524
Query: 436 EGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFS 495
E+ + F M+ I PN +TF+ +LSAC H+G +EE + MK ++G+EP +H+
Sbjct: 525 VEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYY 584
Query: 496 CMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPH 555
C+VDLLG+AG +EA +I MP +P W +LL AC H N L A K L+ P
Sbjct: 585 CVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPD 644
Query: 556 NAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWI 597
+ Y LSN YA+ G W++ + V+ ++ G K+ G SWI
Sbjct: 645 DPSVYTSLSNAYATLGMWDQLSKVREAAKKLGAKES-GMSWI 685
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 140/608 (23%), Positives = 270/608 (44%), Gaps = 83/608 (13%)
Query: 23 LKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNV 82
L+ C + G+S+ A IK I + +++N+ +Y FRL ++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMY----------VDFRLLSD--- 58
Query: 83 FSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREA 142
A ++FDE+ +IV++ T+++ + G+ A+ L++ ++
Sbjct: 59 ------------------AHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDS 100
Query: 143 -GLCLDGFTLSGVIKAC---------------------REDVGLV-----MQLHCFAVLC 175
+ F S V+KAC R DV L+ M + ++
Sbjct: 101 EEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIE 160
Query: 176 GYSCYASVC-------NAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCR 228
S + + N +++ Y GL+ EA +FH M + + +SWN +I G
Sbjct: 161 ANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQ--PNVVSWNCLI--SGFVD 216
Query: 229 EGK-EALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVG 287
+G AL M R G+ +D F + L A + L G Q H ++KSG +P
Sbjct: 217 KGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAI 276
Query: 288 SGLIDMYSKCAPRGMLDCMKVFEE---ISEPDLVLWNTMISGFSQHEDLSEDALICFQDM 344
S LIDMYS C ++ VF + + +WN+M+SGF +E+ +E AL +
Sbjct: 277 SALIDMYSNCGS--LIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEE-NEAALWLLLQI 333
Query: 345 QRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGN 404
++ D + S C N + LG QVH+L + S + + V + LV +++ GN
Sbjct: 334 YQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYI-VGSILVDLHANVGN 392
Query: 405 LHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSA 464
+ DA ++F +P + ++ + +I G + G + LF +++ + + ++L
Sbjct: 393 IQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKV 452
Query: 465 CAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSI 524
C+ + G++ + +K G E E + +VD+ + G+++ + + M + +
Sbjct: 453 CSSLASLGWGKQIHGLCIKK-GYESEPVTATALVDMYVKCGEIDNGVVLFDGM-LERDVV 510
Query: 525 EWAALLGACRKHGNVELAVKAANKFLQ--LEPHNAVPYVMLSNMYASAGRWEES-ATVKR 581
W ++ ++G VE A + +K + +EP N V ++ L + +G EE+ +T++
Sbjct: 511 SWTGIIVGFGQNGRVEEAFRYFHKMINIGIEP-NKVTFLGLLSACRHSGLLEEARSTLET 569
Query: 582 LMRERGVK 589
+ E G++
Sbjct: 570 MKSEYGLE 577
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 12/230 (5%)
Query: 245 MKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD 304
M +D+ +A+ L ++ G +IK G + N + + +I MY R + D
Sbjct: 1 MVMDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDF--RLLSD 58
Query: 305 CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACS 364
KVF+E+SE ++V W TM+SG++ ++ + + + ++ +S V AC
Sbjct: 59 AHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACG 118
Query: 365 NLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLN 424
+ LG V+ K ++ + V + N++V MY K G L +A F + ++ S N
Sbjct: 119 LVGDIQLGILVYERIGKENLRGD-VVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWN 177
Query: 425 SMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEG 474
++I+GY + G+ E++ LF M Q ++V N C +G V++G
Sbjct: 178 TLISGYCKAGLMDEAVTLFHRMPQPNVVSWN---------CLISGFVDKG 218
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 291 bits (746), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 199/657 (30%), Positives = 322/657 (49%), Gaps = 92/657 (14%)
Query: 61 YSKCGTLDNARTSFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLI 120
+++ G L A FR +N ++ S+ A+I A ++ + A ++FDE+P SYN +I
Sbjct: 60 HARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMI 119
Query: 121 AAH-AHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACRED----------VGLVMQLH 169
A ++ + G A LF + E ++G ++A R D V +
Sbjct: 120 TAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVA 179
Query: 170 CFAVLCGY----------SCYASV-------CNAVLARYGGRGLLSEAWRVFHEMGEGCR 212
+L GY + + C++++ Y G + +A +F M E R
Sbjct: 180 SNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTE--R 237
Query: 213 DEISWNAMIVACGQCREGKEALVLFGEMVRMG-MKIDMFTMASVLTAFTCLEDLAGGMQF 271
+ I+W AMI + ++ LF M + G +K++ T+A + A G Q
Sbjct: 238 NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQI 297
Query: 272 HGRMIKSGFNWNPHVGSGLIDMYSKCAPRG-----------------------------M 302
HG + + ++ +G+ L+ MYSK G +
Sbjct: 298 HGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQI 357
Query: 303 LDCMKVFEEISEPDLVLWNTMISGFSQHEDLS---------------------------- 334
+ ++FE++ D+V W MI GFS ++S
Sbjct: 358 SEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNG 417
Query: 335 --EDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVN 392
E+AL F M + P+ +FS V SA ++L+ G Q+H +K +I N +SV
Sbjct: 418 YYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIV-NDLSVQ 476
Query: 393 NALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIV 452
N+LV+MY KCGN +DA ++F + E N VS N+MI+GY+ +G ++L+LF ++
Sbjct: 477 NSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKE 536
Query: 453 PNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAER 512
PN +TF+++LSAC H G V+ G KYF MK + IEP H++CMVDLLGR+G L++A
Sbjct: 537 PNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASN 596
Query: 513 IIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGR 572
+I TMP P S W +LL A + H V+LA AA K ++LEP +A PYV+LS +Y+ G+
Sbjct: 597 LISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGK 656
Query: 573 WEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRK 629
+ + + + + +KK PG SWI + +VH F+A D S ++EI + +M+RK
Sbjct: 657 NRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIG-FTLKMIRK 712
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 126/300 (42%), Gaps = 36/300 (12%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T + K C G +H L + + +L N +YSK G + A+ F +
Sbjct: 277 TLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVM 336
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
N + S+N++I V+ + A ELF+++P D+VS+ +I + +GE V LF
Sbjct: 337 KNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFG 396
Query: 138 EAREAG-------------------------------LCLDGFTLSGVIKACREDVGLV- 165
E +C + +T S V+ A L+
Sbjct: 397 MMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIE 456
Query: 166 -MQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVAC 224
+Q+H V SV N++++ Y G ++A+++F + E + +S+N MI
Sbjct: 457 GLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE--PNIVSYNTMISGY 514
Query: 225 GQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNP 284
GK+AL LF + G + + T ++L+A + + G ++ M KS +N P
Sbjct: 515 SYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSM-KSSYNIEP 573
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 290 bits (742), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 180/578 (31%), Positives = 299/578 (51%), Gaps = 46/578 (7%)
Query: 23 LKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNV 82
+ C + + G+ LH +K + S ++ + YSK G A SFR
Sbjct: 237 FQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFR------- 289
Query: 83 FSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREA 142
EL DE D+ S+ ++IA+ A G+ + +F E +
Sbjct: 290 --------------------ELGDE----DMFSWTSIIASLARSGDMEESFDMFWEMQNK 325
Query: 143 GLCLDGFTLSGVIKACREDVGLVMQ---LHCFAVLCGYSCYASVCNAVLARYGGRGLLSE 199
G+ DG +S +I + + LV Q H F + +S ++VCN++L+ Y LLS
Sbjct: 326 GMHPDGVVISCLINELGK-MMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSV 384
Query: 200 AWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAF 259
A ++F + E E +WN M+ G+ + + + LF ++ +G++ID + SV+++
Sbjct: 385 AEKLFCRISEEGNKE-AWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSC 443
Query: 260 TCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPD--L 317
+ + + G H ++K+ + V + LID+Y K M D + E D +
Sbjct: 444 SHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGK-----MGDLTVAWRMFCEADTNV 498
Query: 318 VLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHA 377
+ WN MI+ + H + SE A+ F M F+P + + AC N S G+ +H
Sbjct: 499 ITWNAMIASYV-HCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHR 557
Query: 378 LAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEG 437
+++ N +S++ AL+ MY+KCG+L +R +FD + + V N MI+GY HG
Sbjct: 558 YITETEHEMN-LSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVE 616
Query: 438 ESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCM 497
++ LF+ M + D+ P TF+++LSAC H G VE+G+K F M + + ++P KH+SC+
Sbjct: 617 SAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCL 675
Query: 498 VDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNA 557
VDLL R+G LEEAE + +MPF P + W LL +C HG E+ ++ A + + +P N
Sbjct: 676 VDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQND 735
Query: 558 VPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCS 595
Y+ML+NMY++AG+WEE+ + +MRE GV K+ G S
Sbjct: 736 GYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHS 773
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 151/575 (26%), Positives = 267/575 (46%), Gaps = 70/575 (12%)
Query: 34 TGKSLHALYIK-TFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAIIDAC 92
G +H L +K +T + F YSKCG L DAC
Sbjct: 143 VGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQ---------------------DAC 181
Query: 93 VKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDG---F 149
+ +FDE+P D+V++ +I+ H GE + + AG +D
Sbjct: 182 L----------VFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPR 231
Query: 150 TLSGVIKACREDVGLVMQ---LHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHE 206
TL +AC ++G + + LH FAV G + V +++ + Y G SEA+ F E
Sbjct: 232 TLECGFQAC-SNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRE 290
Query: 207 MGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLA 266
+G+ D SW ++I + + + +E+ +F EM GM D ++ ++ + +
Sbjct: 291 LGD--EDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVP 348
Query: 267 GGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEP-DLVLWNTMIS 325
G FHG +I+ F+ + V + L+ MY K + + K+F ISE + WNTM+
Sbjct: 349 QGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAE--KLFCRISEEGNKEAWNTMLK 406
Query: 326 GFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIP 385
G+ + + + F+ +Q G D S + V S+CS++ + LGK +H +K+ +
Sbjct: 407 GYGKMK-CHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLD 465
Query: 386 SNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFEL 445
+SV N+L+ +Y K G+L A R+F + N ++ N+MI Y +++ LF+
Sbjct: 466 LT-ISVVNSLIDLYGKMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDR 523
Query: 446 MMQEDIVPNNITFISVLSACAHTGKVEEGQ---KYFNMMKEKFGIEPEAKHFSCMVDLLG 502
M+ E+ P++IT +++L AC +TG +E GQ +Y + + + A ++D+
Sbjct: 524 MVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSA----ALIDMYA 579
Query: 503 RAGKLEEAERIIETMPFDPG----SIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAV 558
+ G LE++ + FD G ++ W ++ HG+VE A+ F Q+E +
Sbjct: 580 KCGHLEKSREL-----FDAGNQKDAVCWNVMISGYGMHGDVESAIAL---FDQMEESDVK 631
Query: 559 P----YVMLSNMYASAGRWEESATVKRLMRERGVK 589
P ++ L + AG E+ + M + VK
Sbjct: 632 PTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVK 666
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 134/563 (23%), Positives = 238/563 (42%), Gaps = 54/563 (9%)
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
+ N+F + +I + + +L+ +F + R DI +N++I AH G++ ++ F
Sbjct: 56 SENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFS 115
Query: 139 AREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLC---GYSCYASVCNAVLARYGGRG 195
+G D FT V+ AC E + + ++ G+ +V + + Y G
Sbjct: 116 MLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCG 175
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
L +A VF EM + RD ++W A+I Q E + L +M G +D ++
Sbjct: 176 FLQDACLVFDEMPD--RDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTL 233
Query: 256 LTAFTCLEDLAG---GMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEI 312
F +L G HG +K+G + V S + YSK + F E+
Sbjct: 234 ECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPS--EAYLSFREL 291
Query: 313 SEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLG 372
+ D+ W ++I+ ++ D+ E++ F +MQ G PD SC+ + + G
Sbjct: 292 GDEDMFSWTSIIASLARSGDM-EESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQG 350
Query: 373 KQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH-NTVSLNSMITGYA 431
K H I+ + +V N+L++MY K L A ++F + E N + N+M+ GY
Sbjct: 351 KAFHGFVIRHCFSLDS-TVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYG 409
Query: 432 QHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEA 491
+ + ++LF + I ++ + SV+S+C+H G V G K + K ++
Sbjct: 410 KMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLG-KSLHCYVVKTSLDLTI 468
Query: 492 KHFSCMVDLLGRAGKL---------------------------EEAERIIETMP------ 518
+ ++DL G+ G L E++E+ I
Sbjct: 469 SVVNSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSEN 528
Query: 519 FDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPH--NAVPYVMLSNMYASAGRWEES 576
F P SI LL AC G++E + ++++ H N L +MYA G E+S
Sbjct: 529 FKPSSITLVTLLMACVNTGSLERG-QMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKS 587
Query: 577 ATVKRLMRERGVKKKPGCSWIQI 599
R + + G +K C + I
Sbjct: 588 ----RELFDAGNQKDAVCWNVMI 606
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 122/269 (45%), Gaps = 8/269 (2%)
Query: 275 MIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLS 334
+I G + N V S LI Y+ + +VF ++ D+ LWN++I + D +
Sbjct: 50 IITGGLSENIFVASKLISSYASYGKPNLSS--RVFHLVTRRDIFLWNSIIKAHFSNGDYA 107
Query: 335 EDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNA 394
+L F M +G PD + V SAC+ L +G VH L +K +V +
Sbjct: 108 R-SLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGAS 166
Query: 395 LVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHG-VEGESLQLFELMMQEDIV- 452
V YSKCG L DA VFD MP+ + V+ ++I+G+ Q+G EG L ++ V
Sbjct: 167 FVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVD 226
Query: 453 -PNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAE 511
PN T AC++ G ++EG + + K G+ S M ++G EA
Sbjct: 227 KPNPRTLECGFQACSNLGALKEG-RCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAY 285
Query: 512 RIIETMPFDPGSIEWAALLGACRKHGNVE 540
+ D W +++ + + G++E
Sbjct: 286 LSFRELG-DEDMFSWTSIIASLARSGDME 313
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 151/444 (34%), Positives = 255/444 (57%), Gaps = 35/444 (7%)
Query: 217 WNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMI 276
+ AMI + + L+ M+ + D + + SVL A C DL + H +++
Sbjct: 95 YTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKA--C--DLKVCREIHAQVL 150
Query: 277 KSGFNWNPHVGSGLIDMYSK-------------------CAPRGMLDC----------MK 307
K GF + VG ++++Y K A M++C ++
Sbjct: 151 KLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALE 210
Query: 308 VFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLS 367
+F+++ D V W MI G +++++++ AL F++MQ ++ + CV SACS+L
Sbjct: 211 LFQDVKIKDTVCWTAMIDGLVRNKEMNK-ALELFREMQMENVSANEFTAVCVLSACSDLG 269
Query: 368 SPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMI 427
+ LG+ VH+ + + V NAL+ MYS+CG++++ARRVF M + + +S N+MI
Sbjct: 270 ALELGRWVHSFVENQRMELSNF-VGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMI 328
Query: 428 TGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGI 487
+G A HG E++ F M+ PN +T +++L+AC+H G ++ G + FN MK F +
Sbjct: 329 SGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNV 388
Query: 488 EPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAAN 547
EP+ +H+ C+VDLLGR G+LEEA R IE +P +P I LL AC+ HGN+EL K A
Sbjct: 389 EPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAK 448
Query: 548 KFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFV 607
+ + E ++ YV+LSN+YAS+G+W+ES ++ MR+ G++K+PGCS I++DN++H F+
Sbjct: 449 RLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFL 508
Query: 608 AEDSSHPMIKEIHEYMGEMLRKMK 631
D +HP + I++ + E+ R ++
Sbjct: 509 VGDIAHPHKEAIYQRLQELNRILR 532
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 125/530 (23%), Positives = 219/530 (41%), Gaps = 106/530 (20%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T ++L+ C ++I+ S+HA I+TF ++ F L+ C TLD+ ++
Sbjct: 31 TLISVLRSC---KNIAHVPSIHAKIIRTFHDQDAFVV--FELI-RVCSTLDSVDYAY--- 81
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+VFSY + P++ Y +I G V L+
Sbjct: 82 ---DVFSY----------------------VSNPNVYLYTAMIDGFVSSGRSADGVSLYH 116
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLL 197
+ D + ++ V+KAC D+ + ++H + G+ SV ++ YG G L
Sbjct: 117 RMIHNSVLPDNYVITSVLKAC--DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGEL 174
Query: 198 SEAWRVFHEMGE-----------------------------GCRDEISWNAMIVACGQCR 228
A ++F EM + +D + W AMI + +
Sbjct: 175 VNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNK 234
Query: 229 EGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGS 288
E +AL LF EM + + FT VL+A + L L G H + + VG+
Sbjct: 235 EMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGN 294
Query: 289 GLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAG 348
LI+MYS+C + + +VF + + D++ +NTMISG + H S +A+ F+DM G
Sbjct: 295 ALINMYSRCGD--INEARRVFRVMRDKDVISYNTMISGLAMH-GASVEAINEFRDMVNRG 351
Query: 349 FRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDA 408
FRP+ + + +ACS+ +G +V + ++ +V + + G L +A
Sbjct: 352 FRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEA 411
Query: 409 RRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHT 468
R + +P I P++I ++LSAC
Sbjct: 412 YRFIENIP----------------------------------IEPDHIMLGTLLSACKIH 437
Query: 469 GKVEEGQKYFNMMKEKFGIE-PEAKHFSCMVDLLGRAGKLEEAERIIETM 517
G +E G+K + K F E P++ + + +L +GK +E+ I E+M
Sbjct: 438 GNMELGEK---IAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESM 484
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 286 bits (733), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 197/632 (31%), Positives = 318/632 (50%), Gaps = 49/632 (7%)
Query: 1 MNQFPCXXXXXXXXXXXTFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLL 60
+ F C T ++++ C + +S+H + L N +
Sbjct: 187 LRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTM 246
Query: 61 YSKCGTLDNARTSFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLI 120
YSKCG L ++ +F++I + + VS+ +I
Sbjct: 247 YSKCGDLLSSE-------------------------------RIFEKIAKKNAVSWTAMI 275
Query: 121 AAHAHRGEHG-PAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQ---LHCFAVLCG 176
+++ +RGE A+R F E ++G+ + TL V+ +C +GL+ + +H FAV
Sbjct: 276 SSY-NRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGL-IGLIREGKSVHGFAVRRE 333
Query: 177 YS-CYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALV 235
Y S+ A++ Y G LS+ V + + R+ ++WN++I +AL
Sbjct: 334 LDPNYESLSLALVELYAECGKLSDCETVLRVVSD--RNIVAWNSLISLYAHRGMVIQALG 391
Query: 236 LFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYS 295
LF +MV +K D FT+AS ++A + G Q HG +I++ + + V + LIDMYS
Sbjct: 392 LFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYS 450
Query: 296 KCAPRGMLDCMK-VFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDC 354
K G +D VF +I +V WN+M+ GFSQ+ + S +A+ F M + ++
Sbjct: 451 KS---GSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGN-SVEAISLFDYMYHSYLEMNEV 506
Query: 355 SFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDT 414
+F V ACS++ S GK VH I S + + + AL+ MY+KCG+L+ A VF
Sbjct: 507 TFLAVIQACSSIGSLEKGKWVHHKLIISGLKD--LFTDTALIDMYAKCGDLNAAETVFRA 564
Query: 415 MPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEG 474
M + VS +SMI Y HG G ++ F M++ PN + F++VLSAC H+G VEEG
Sbjct: 565 MSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEG 624
Query: 475 QKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACR 534
+ YFN+MK FG+ P ++HF+C +DLL R+G L+EA R I+ MPF + W +L+ CR
Sbjct: 625 KYYFNLMK-SFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCR 683
Query: 535 KHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGC 594
H +++ N + + Y +LSN+YA G WEE ++ M+ +KK PG
Sbjct: 684 IHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGY 743
Query: 595 SWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEM 626
S I+ID KV F A + + EI+ ++G +
Sbjct: 744 SAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 243/496 (48%), Gaps = 18/496 (3%)
Query: 101 ARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKAC-- 158
+R +F+ P PD Y LI + A+ L+ + F V++AC
Sbjct: 53 SRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAG 112
Query: 159 -REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISW 217
RE + + ++H + G A + ++L YG G LS+A +VF G RD ++W
Sbjct: 113 SREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFD--GMPVRDLVAW 170
Query: 218 NAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIK 277
+ ++ +C + E +AL +F MV G++ D TM SV+ L L HG++ +
Sbjct: 171 STLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITR 230
Query: 278 SGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDA 337
F+ + + + L+ MYSKC +L ++FE+I++ + V W MIS +++ E SE A
Sbjct: 231 KMFDLDETLCNSLLTMYSKCGD--LLSSERIFEKIAKKNAVSWTAMISSYNRGE-FSEKA 287
Query: 338 LICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVA 397
L F +M ++G P+ + V S+C + GK VH A++ ++ N S++ ALV
Sbjct: 288 LRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVE 347
Query: 398 MYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNIT 457
+Y++CG L D V + + N V+ NS+I+ YA G+ ++L LF M+ + I P+ T
Sbjct: 348 LYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFT 407
Query: 458 FISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETM 517
S +SAC + G V G++ + + + E S ++D+ ++G ++ A + +
Sbjct: 408 LASSISACENAGLVPLGKQIHGHVI-RTDVSDEFVQNS-LIDMYSKSGSVDSASTVFNQI 465
Query: 518 PFDPGSIEWAALLGACRKHGNVELAVKAAN----KFLQLEPHNAVPYVMLSNMYASAGRW 573
+ W ++L ++GN A+ + +L++ N V ++ + +S G
Sbjct: 466 K-HRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEM---NEVTFLAVIQACSSIGSL 521
Query: 574 EESATVKRLMRERGVK 589
E+ V + G+K
Sbjct: 522 EKGKWVHHKLIISGLK 537
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 147/302 (48%), Gaps = 14/302 (4%)
Query: 270 QFHGRMIKSG-FNWNPHVGSGLIDMYSKCAPRGMLDCMK-VFEEISEPDLVLWNTMIS-G 326
Q H ++ +G +P + LI+ Y A G D + VFE PD ++ +I
Sbjct: 19 QLHAHLLVTGRLRRDPLPVTKLIESY---AFMGSPDSSRLVFEAFPYPDSFMYGVLIKCN 75
Query: 327 FSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACS-NLSSPSLGKQVHALAIKSDIP 385
H L + A+ + + + F V AC+ + S+G +VH IK +
Sbjct: 76 VWCH--LLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVD 133
Query: 386 SNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFEL 445
+ V + +L+ MY + GNL DA +VFD MP + V+ +++++ ++G ++L++F+
Sbjct: 134 DDAV-IETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKC 192
Query: 446 MMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAG 505
M+ + + P+ +T ISV+ CA G + + + K + + + ++ + + G
Sbjct: 193 MVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKM-FDLDETLCNSLLTMYSKCG 251
Query: 506 KLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ--LEPHNAVPYVML 563
L +ERI E + ++ W A++ + + E A+++ ++ ++ +EP+ Y +L
Sbjct: 252 DLLSSERIFEKIA-KKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVL 310
Query: 564 SN 565
S+
Sbjct: 311 SS 312
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 285 bits (730), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 175/500 (35%), Positives = 276/500 (55%), Gaps = 14/500 (2%)
Query: 102 RELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACRE- 160
R +FD D +S+ ++++ + EH A+ +F E GL + FTLS +KAC E
Sbjct: 117 RRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSEL 176
Query: 161 -DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNA 219
+V L H + G+ + + + YG +A RVF EM E D I W A
Sbjct: 177 GEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPE--PDVICWTA 234
Query: 220 MIVACGQCREGKEALVLFGEMVR-MGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKS 278
++ A + +EAL LF M R G+ D T +VLTA L L G + HG++I +
Sbjct: 235 VLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN 294
Query: 279 GFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDAL 338
G N V S L+DMY KC + + +VF +S+ + V W+ ++ G+ Q+ + E A+
Sbjct: 295 GIGSNVVVESSLLDMYGKCGS--VREARQVFNGMSKKNSVSWSALLGGYCQNGE-HEKAI 351
Query: 339 ICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAM 398
F++M+ D F V AC+ L++ LGK++H ++ N V V +AL+ +
Sbjct: 352 EIFREMEE----KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGN-VIVESALIDL 406
Query: 399 YSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITF 458
Y K G + A RV+ M N ++ N+M++ AQ+G E++ F M+++ I P+ I+F
Sbjct: 407 YGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISF 466
Query: 459 ISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMP 518
I++L+AC HTG V+EG+ YF +M + +GI+P +H+SCM+DLLGRAG EEAE ++E
Sbjct: 467 IAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAE 526
Query: 519 FDPGSIEWAALLGACRKHGNV-ELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESA 577
+ W LLG C + + +A + A + ++LEP + YV+LSNMY + GR ++
Sbjct: 527 CRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDAL 586
Query: 578 TVKRLMRERGVKKKPGCSWI 597
+++LM RGV K G SWI
Sbjct: 587 NIRKLMVRRGVAKTVGQSWI 606
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 152/293 (51%), Gaps = 6/293 (2%)
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEI 312
AS+L + G+QFH ++KSG + +VG+ L+ +Y K P GM + +VF+
Sbjct: 65 ASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGP-GMRETRRVFDGR 123
Query: 313 SEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLG 372
D + W +M+SG+ ++ AL F +M G ++ + S ACS L LG
Sbjct: 124 FVKDAISWTSMMSGYVTGKE-HVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 182
Query: 373 KQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQ 432
+ H + I N +++ L +Y DARRVFD MPE + + ++++ +++
Sbjct: 183 RCFHGVVITHGFEWNHF-ISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSK 241
Query: 433 HGVEGESLQLFELMMQ-EDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEA 491
+ + E+L LF M + + +VP+ TF +VL+AC + ++++G++ + GI
Sbjct: 242 NDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN-GIGSNV 300
Query: 492 KHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVK 544
S ++D+ G+ G + EA ++ M S+ W+ALLG ++G E A++
Sbjct: 301 VVESSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGGYCQNGEHEKAIE 352
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 162/333 (48%), Gaps = 14/333 (4%)
Query: 101 ARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEA-REAGLCLDGFTLSGVIKACR 159
AR +FDE+P PD++ + +++A + + A+ LF R GL DG T V+ AC
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 160 EDVGLVM--QLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISW 217
L ++H + G V +++L YG G + EA +VF+ M + ++ +SW
Sbjct: 277 NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSK--KNSVSW 334
Query: 218 NAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIK 277
+A++ Q E ++A+ +F EM + D++ +VL A L + G + HG+ ++
Sbjct: 335 SALLGGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVR 390
Query: 278 SGFNWNPHVGSGLIDMYSKCAPRGMLDCM-KVFEEISEPDLVLWNTMISGFSQHEDLSED 336
G N V S LID+Y K G +D +V+ ++S +++ WN M+S +Q+ E+
Sbjct: 391 RGCFGNVIVESALIDLYGKS---GCIDSASRVYSKMSIRNMITWNAMLSALAQN-GRGEE 446
Query: 337 ALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALV 396
A+ F DM + G +PD SF + +AC + G+ L KS + ++
Sbjct: 447 AVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMI 506
Query: 397 AMYSKCGNLHDARRVFDTMPEHNTVSLNSMITG 429
+ + G +A + + N SL ++ G
Sbjct: 507 DLLGRAGLFEEAENLLERAECRNDASLWGVLLG 539
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 143/327 (43%), Gaps = 49/327 (14%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF +L C + R + GK +H I I + + + +Y KCG++ AR
Sbjct: 267 TFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREAR------ 320
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
++F+ + + + VS++ L+ + GEH A+ +F+
Sbjct: 321 -------------------------QVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFR 355
Query: 138 EAREAGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVC--NAVLARYGG 193
E E D + V+KAC V L ++H V G C+ +V +A++ YG
Sbjct: 356 EMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRG--CFGNVIVESALIDLYGK 409
Query: 194 RGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMA 253
G + A RV+ +M R+ I+WNAM+ A Q G+EA+ F +MV+ G+K D +
Sbjct: 410 SGCIDSASRVYSKM--SIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFI 467
Query: 254 SVLTAFTCLEDLAGGMQFHGRMIKS-GFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEI 312
++LTA + G + M KS G S +ID+ + G+ + + E
Sbjct: 468 AILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRA---GLFEEAENLLER 524
Query: 313 SE--PDLVLWNTMISGFSQHEDLSEDA 337
+E D LW ++ + + D S A
Sbjct: 525 AECRNDASLWGVLLGPCAANADASRVA 551
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 98/192 (51%), Gaps = 10/192 (5%)
Query: 356 FSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCG-NLHDARRVFDT 414
++ + C+ + S G Q HA +KS + ++R +V N+L+++Y K G + + RRVFD
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDR-NVGNSLLSLYFKLGPGMRETRRVFDG 122
Query: 415 MPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEG 474
+ +S SM++GY ++L++F M+ + N T S + AC+ G+V G
Sbjct: 123 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 182
Query: 475 QKYFN-MMKEKFGIEPEAKHF--SCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLG 531
+ + ++ F E HF S + L G + +A R+ + MP +P I W A+L
Sbjct: 183 RCFHGVVITHGF----EWNHFISSTLAYLYGVNREPVDARRVFDEMP-EPDVICWTAVLS 237
Query: 532 ACRKHGNVELAV 543
A K+ E A+
Sbjct: 238 AFSKNDLYEEAL 249
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 285 bits (728), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 188/621 (30%), Positives = 317/621 (51%), Gaps = 48/621 (7%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TFT+L++ C D+ G SL++ IK + + +YS CG L++AR
Sbjct: 201 TFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESAR------ 254
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+FD + D V++NT+I + + F+
Sbjct: 255 -------------------------RIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFR 289
Query: 138 EAREAGLCLDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
+G+ FT S V+ C + L +H ++ + NA+L Y G
Sbjct: 290 NMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCG 349
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGM-KIDMFTMAS 254
+ EA+ VF + + +SWN++I C + G++A++++ ++RM + D +T ++
Sbjct: 350 DMREAFYVFGRIHNP--NLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSA 407
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISE 314
++A E G HG++ K G+ + VG+ L+ MY K R KVF+ + E
Sbjct: 408 AISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFK--NREAESAQKVFDVMKE 465
Query: 315 PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQ 374
D+VLW MI G S+ + SE A+ F +M R R D S S V ACS+++ G+
Sbjct: 466 RDVVLWTEMIVGHSRLGN-SELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEV 524
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHG 434
H LAI++ +SV ALV MY K G A +F + NSM+ Y+QHG
Sbjct: 525 FHCLAIRTGFDC-VMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHG 583
Query: 435 VEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHF 494
+ ++L FE +++ +P+ +T++S+L+AC+H G +G+ +N MKE+ GI+ KH+
Sbjct: 584 MVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQ-GIKAGFKHY 642
Query: 495 SCMVDLLGRAGKLEEAERIIETMPFDPGSIE---WAALLGACRKHGNVELAVKAANKFLQ 551
SCMV+L+ +AG ++EA +IE P PG+ + W LL AC N+++ + AA + L+
Sbjct: 643 SCMVNLVSKAGLVDEALELIEQSP--PGNNQAELWRTLLSACVNTRNLQIGLYAAEQILK 700
Query: 552 LEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQI-DNKVHVFVAED 610
L+P + +++LSN+YA GRWE+ A ++R +R K PG SWI++ +N VF + D
Sbjct: 701 LDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGD 760
Query: 611 SSHP-MIKEIHEYMGEMLRKM 630
S+P ++ + + + + R M
Sbjct: 761 QSNPEVVSQAQDELNRLKRNM 781
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 158/576 (27%), Positives = 262/576 (45%), Gaps = 47/576 (8%)
Query: 22 LLKQCISQRDISTGKSLHALYIKT---FIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTN 78
L ++C+S + + +HAL + S Y +N+ +Y +CG+L+ AR F
Sbjct: 100 LTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMP 159
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
+ NV SYNA+ A ++ PD SY + H P
Sbjct: 160 HRNVVSYNALYSAYSRN---------------PDFASYAFPLTTHMAFEYVKP------- 197
Query: 139 AREAGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGL 196
+ T + +++ C EDV + L+ + GYS V +VL Y G
Sbjct: 198 --------NSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGD 249
Query: 197 LSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVL 256
L A R+F + RD ++WN MIV + + ++ L+ F M+ G+ FT + VL
Sbjct: 250 LESARRIFDCVNN--RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVL 307
Query: 257 TAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPD 316
+ L + G H R+I S + + + L+DMY C M + VF I P+
Sbjct: 308 NGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGD--MREAFYVFGRIHNPN 365
Query: 317 LVLWNTMISGFSQHEDLSEDALICFQDMQRAGF-RPDDCSFSCVTSACSNLSSPSLGKQV 375
LV WN++ISG S++ E A++ ++ + R RPD+ +FS SA + GK +
Sbjct: 366 LVSWNSIISGCSEN-GFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLL 424
Query: 376 HALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGV 435
H K + V V L++MY K A++VFD M E + V MI G+++ G
Sbjct: 425 HGQVTKLGYERS-VFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGN 483
Query: 436 EGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFS 495
++Q F M +E + + SV+ AC+ + +G+ F+ + + G +
Sbjct: 484 SELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGE-VFHCLAIRTGFDCVMSVCG 542
Query: 496 CMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ--LE 553
+VD+ G+ GK E AE I ++ +P W ++LGA +HG VE A+ + L+
Sbjct: 543 ALVDMYGKNGKYETAETIF-SLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFM 601
Query: 554 PHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVK 589
P +AV Y+ L + G + + M+E+G+K
Sbjct: 602 P-DAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIK 636
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 22/270 (8%)
Query: 284 PHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLV-------LWNTMISGFSQHEDLSED 336
P+ + LI MY +C+ + KVF+++ + ++V ++ + G S H +
Sbjct: 22 PYANNNLISMYVRCS--SLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQI--- 76
Query: 337 ALICFQDMQRAGFRP-DDCSFSCV--TSACSNLSSPSLGKQVHALAIKSDIPSNRVS--V 391
I Q F P ++ + S V T C +++ +Q+HAL + + + S
Sbjct: 77 --IKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYA 134
Query: 392 NNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQH-GVEGESLQLFELMMQED 450
NN L++MY +CG+L AR+VFD MP N VS N++ + Y+++ + L M E
Sbjct: 135 NNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEY 194
Query: 451 IVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEA 510
+ PN+ TF S++ CA V G N K G + ++ + G LE A
Sbjct: 195 VKPNSSTFTSLVQVCAVLEDVLMGSS-LNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESA 253
Query: 511 ERIIETMPFDPGSIEWAALLGACRKHGNVE 540
RI + + + ++ W ++ K+ +E
Sbjct: 254 RRIFDCVN-NRDAVAWNTMIVGSLKNDKIE 282
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 285 bits (728), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 163/417 (39%), Positives = 238/417 (57%), Gaps = 11/417 (2%)
Query: 225 GQCREG--KEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNW 282
G C G KEA+ G + G++++ T A +L ++ G + H +M GF
Sbjct: 85 GLCVTGRLKEAV---GLLWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFAL 141
Query: 283 NPHVGSGLIDMYSKCAPRGMLDCMKV-FEEISEPDLVLWNTMISGFSQHEDLSEDALICF 341
N ++ L+ +Y A G L + F + DL+ WN MISG+ Q + L ++ L +
Sbjct: 142 NEYLKVKLLILY---ALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQ-KGLEQEGLFIY 197
Query: 342 QDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSK 401
DM++ PD +F+ V ACS L GK+ HA+ IK I SN + V++ALV MY K
Sbjct: 198 YDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSN-IIVDSALVDMYFK 256
Query: 402 CGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISV 461
C + D RVFD + N ++ S+I+GY HG E L+ FE M +E PN +TF+ V
Sbjct: 257 CSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVV 316
Query: 462 LSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDP 521
L+AC H G V++G ++F MK +GIEPE +H++ MVD LGRAG+L+EA + P
Sbjct: 317 LTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKE 376
Query: 522 GSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKR 581
W +LLGACR HGNV+L AA KFL+L+P N YV+ +N YAS G E ++ V+R
Sbjct: 377 HPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRR 436
Query: 582 LMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPD 638
M GVKK PG S I++ +VH F+ +D+SH + ++I++ + EM Y PD
Sbjct: 437 KMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYPD 493
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 7/226 (3%)
Query: 142 AGLCLDGFTLSGVIKAC--REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSE 199
+GL ++ T + +++ C R++ ++H + G++ + +L Y G L
Sbjct: 102 SGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQT 161
Query: 200 AWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAF 259
A +F + RD I WNAMI Q +E L ++ +M + + D +T ASV A
Sbjct: 162 AGILFRSLK--IRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRAC 219
Query: 260 TCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVL 319
+ L+ L G + H MIK N V S L+DMY KC+ D +VF+++S +++
Sbjct: 220 SALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCS--SFSDGHRVFDQLSTRNVIT 277
Query: 320 WNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSN 365
W ++ISG+ H +SE L CF+ M+ G RP+ +F V +AC++
Sbjct: 278 WTSLISGYGYHGKVSE-VLKCFEKMKEEGCRPNPVTFLVVLTACNH 322
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 177/553 (32%), Positives = 294/553 (53%), Gaps = 42/553 (7%)
Query: 108 IPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLVM- 166
+ P ++ YN ++ + A + LF E R GL D FTL V+K+ ++
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 167 -QLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACG 225
++H +AV G + V N+++ Y G + +VF EM + RD +SWN +I +
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQ--RDVVSWNGLISSYV 123
Query: 226 QCREGKEALVLFGEMVR-MGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNP 284
++A+ +F M + +K D T+ S L+A + L++L G + + R + + F +
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIY-RFVVTEFEMSV 182
Query: 285 HVGSGLIDMYSKCA----PRGMLDCMK-------------------------VFEEISEP 315
+G+ L+DM+ KC R + D M+ +FE
Sbjct: 183 RIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVK 242
Query: 316 DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQV 375
D+VLW M++G+ Q E AL F+ MQ AG RPD+ + + C+ + GK +
Sbjct: 243 DVVLWTAMMNGYVQFNRFDE-ALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWI 301
Query: 376 HALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGV 435
H ++ + ++V V ALV MY+KCG + A VF + E +T S S+I G A +G+
Sbjct: 302 HGYINENRVTVDKV-VGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGM 360
Query: 436 EGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFS 495
G +L L+ M + + ITF++VL+AC H G V EG+K F+ M E+ ++P+++H S
Sbjct: 361 SGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCS 420
Query: 496 CMVDLLGRAGKLEEAERIIETMPFDPGSI---EWAALLGACRKHGNVELAVKAANKFLQL 552
C++DLL RAG L+EAE +I+ M + + +LL A R +GNV++A + A K ++
Sbjct: 421 CLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKV 480
Query: 553 EPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDS- 611
E ++ + +L+++YASA RWE+ V+R M++ G++K PGCS I+ID H F+ D
Sbjct: 481 EVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDL 540
Query: 612 -SHPMIKEIHEYM 623
SHP + EI+ +
Sbjct: 541 LSHPKMDEINSML 553
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 174/412 (42%), Gaps = 31/412 (7%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T +LK R + G+ +H +K + +Y+SN +Y+ G ++ F
Sbjct: 48 TLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEM 107
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYN------TLIAAHAHRG-EHG 130
+V S+N +I + V + A +F + + + ++ TL A A + E G
Sbjct: 108 PQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIG 167
Query: 131 PAVRLF------KEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVC 184
+ F R +D F G + R + + C+ S+
Sbjct: 168 ERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNV-------KCWTSMV 220
Query: 185 NAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMG 244
Y G + EA RV E +D + W AM+ Q EAL LF M G
Sbjct: 221 FG----YVSTGRIDEA-RVLFERSP-VKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAG 274
Query: 245 MKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD 304
++ D F + S+LT L G HG + ++ + VG+ L+DMY+KC +
Sbjct: 275 IRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGC--IET 332
Query: 305 CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACS 364
++VF EI E D W ++I G + + +S AL + +M+ G R D +F V +AC+
Sbjct: 333 ALEVFYEIKERDTASWTSLIYGLAMN-GMSGRALDLYYEMENVGVRLDAITFVAVLTACN 391
Query: 365 NLSSPSLGKQV-HALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTM 415
+ + G+++ H++ + ++ + L+ + + G L +A + D M
Sbjct: 392 HGGFVAEGRKIFHSMTERHNVQPKSEHC-SCLIDLLCRAGLLDEAEELIDKM 442
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 172/532 (32%), Positives = 280/532 (52%), Gaps = 20/532 (3%)
Query: 81 NVFSYNAIIDACV---KHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
NV + +ID C + +L AR +F+ I P + +N++I +++ A+ ++
Sbjct: 37 NVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQ 96
Query: 138 EAREAGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
E G D FT V+KAC D+ +H F V G+ V +L Y G
Sbjct: 97 EMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCG 156
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
++ RVF ++ + + ++W ++I +A+ F EM G+K + M +
Sbjct: 157 EVNYGLRVFEDIPQ--WNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDL 214
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFN--------WNPHVGSGLIDMYSKCAPRGMLDCMK 307
L A +D+ G FHG + GF+ +N + + LIDMY+KC +
Sbjct: 215 LVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGD--LRTARY 272
Query: 308 VFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLS 367
+F+ + E LV WN++I+G+SQ+ D +E+AL F DM G PD +F V A
Sbjct: 273 LFDGMPERTLVSWNSIITGYSQNGD-AEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQG 331
Query: 368 SPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMI 427
LG+ +HA K+ + ++ ALV MY+K G+ A++ F+ + + +T++ +I
Sbjct: 332 CSQLGQSIHAYVSKTGFVKD-AAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVI 390
Query: 428 TGYAQHGVEGESLQLFELMMQE-DIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFG 486
G A HG E+L +F+ M ++ + P+ IT++ VL AC+H G VEEGQ+YF M++ G
Sbjct: 391 IGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHG 450
Query: 487 IEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAA 546
+EP +H+ CMVD+L RAG+ EEAER+++TMP P W ALL C H N+EL +
Sbjct: 451 LEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIR 510
Query: 547 NKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQ 598
+ + E + YV+LSN+YA AGRW + ++ M+ + V K G S ++
Sbjct: 511 SMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 137/283 (48%), Gaps = 13/283 (4%)
Query: 270 QFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMK-VFEEISEPDLVLWNTMISGFS 328
Q HG MIKS N S LID + C L + VFE I P + +WN+MI G+S
Sbjct: 24 QLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYS 83
Query: 329 QHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNR 388
+ + ALI +Q+M R G+ PD +F V ACS L G VH +K+ N
Sbjct: 84 NSPN-PDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVN- 141
Query: 389 VSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQ 448
+ V+ L+ MY CG ++ RVF+ +P+ N V+ S+I+G+ + ++++ F M
Sbjct: 142 MYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQS 201
Query: 449 EDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKH--------FSCMVDL 500
+ N + +L AC + G K+F+ + G +P + + ++D+
Sbjct: 202 NGVKANETIMVDLLVACGRCKDIVTG-KWFHGFLQGLGFDPYFQSKVGFNVILATSLIDM 260
Query: 501 LGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAV 543
+ G L A + + MP + + W +++ ++G+ E A+
Sbjct: 261 YAKCGDLRTARYLFDGMP-ERTLVSWNSIITGYSQNGDAEEAL 302
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 183/603 (30%), Positives = 294/603 (48%), Gaps = 55/603 (9%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLF--- 136
P+ F + +I + A +FDEI + SYN L+ A+ R + A LF
Sbjct: 55 PDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSW 114
Query: 137 --------KEAREAGLCLDGFTLSGVIKACR--EDV---GLVMQLHCFAVLCGYSCYASV 183
AR D ++S V+KA +D L Q+H F + G+ V
Sbjct: 115 IGSSCYSSDAARP-----DSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFV 169
Query: 184 CNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVR- 242
N ++ Y + A +VF EM E RD +SWN+MI Q ++ ++ M+
Sbjct: 170 GNGMITYYTKCDNIESARKVFDEMSE--RDVVSWNSMISGYSQSGSFEDCKKMYKAMLAC 227
Query: 243 MGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAP--- 299
K + T+ SV A DL G++ H +MI++ + + + +I Y+KC
Sbjct: 228 SDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDY 287
Query: 300 -RGMLD-------------------------CMKVFEEISEPDLVLWNTMISGFSQHEDL 333
R + D M +F E+ L WN MISG Q+
Sbjct: 288 ARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNH- 346
Query: 334 SEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNN 393
E+ + F++M R G RP+ + S + + + S+ GK++HA AI++ N + V
Sbjct: 347 HEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNG-ADNNIYVTT 405
Query: 394 ALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVP 453
+++ Y+K G L A+RVFD + + ++ ++IT YA HG + LF+ M P
Sbjct: 406 SIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKP 465
Query: 454 NNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERI 513
+++T +VLSA AH+G + Q F+ M K+ IEP +H++CMV +L RAGKL +A
Sbjct: 466 DDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEF 525
Query: 514 IETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRW 573
I MP DP + W ALL G++E+A A ++ ++EP N Y +++N+Y AGRW
Sbjct: 526 ISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRW 585
Query: 574 EESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQA 633
EE+ V+ M+ G+KK PG SWI+ + + F+A+DSS KE++E + ++ M
Sbjct: 586 EEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDK 645
Query: 634 GYV 636
Y+
Sbjct: 646 EYI 648
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/521 (22%), Positives = 215/521 (41%), Gaps = 110/521 (21%)
Query: 33 STGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAIIDAC 92
S + +H I+ ++ N Y+KC +++AR
Sbjct: 149 SLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESAR--------------------- 187
Query: 93 VKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEARE-AGLCLDGFTL 151
++FDE+ D+VS+N++I+ ++ G +++K + +G T+
Sbjct: 188 ----------KVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTV 237
Query: 152 SGVIKACREDVGLV--MQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGE 209
V +AC + L+ +++H + S+CNAV+ Y G L A +F EM E
Sbjct: 238 ISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSE 297
Query: 210 GCRDEI-------------------------------SWNAMIVACGQCREGKEALVLFG 238
+D + +WNAMI Q +E + F
Sbjct: 298 --KDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFR 355
Query: 239 EMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCA 298
EM+R G + + T++S+L + T +L GG + H I++G + N +V + +ID Y+K
Sbjct: 356 EMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLG 415
Query: 299 PRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSC 358
+L +VF+ + L+ W +I+ ++ H D S+ A F MQ G +PDD + +
Sbjct: 416 F--LLGAQRVFDNCKDRSLIAWTAIITAYAVHGD-SDSACSLFDQMQCLGTKPDDVTLTA 472
Query: 359 VTSACSNLSSPSLGKQV-HALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPE 417
V SA ++ + + + ++ K DI V +V++ S+ G L DA MP
Sbjct: 473 VLSAFAHSGDSDMAQHIFDSMLTKYDIEPG-VEHYACMVSVLSRAGKLSDAMEFISKMP- 530
Query: 418 HNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKY 477
I P + ++L+ + G +E +
Sbjct: 531 ---------------------------------IDPIAKVWGALLNGASVLGDLEIARFA 557
Query: 478 FNMMKEKFGIEPE-AKHFSCMVDLLGRAGKLEEAERIIETM 517
+ + F +EPE +++ M +L +AG+ EEAE + M
Sbjct: 558 CDRL---FEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKM 595
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 146/309 (47%), Gaps = 18/309 (5%)
Query: 269 MQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFS 328
+Q H R++ + + S LI Y++ + VF+EI+ + +N ++ ++
Sbjct: 42 LQLHARIVVFSIKPDNFLASKLISFYTR--QDRFRQALHVFDEITVRNAFSYNALLIAYT 99
Query: 329 QHEDLSEDALICFQD------MQRAGFRPDDCSFSCVT---SACSNLSSPSLGKQVHALA 379
E + DA F RPD S SCV S C + SL +QVH
Sbjct: 100 SRE-MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFV 158
Query: 380 IKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGES 439
I+ S+ V V N ++ Y+KC N+ AR+VFD M E + VS NSMI+GY+Q G +
Sbjct: 159 IRGGFDSD-VFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDC 217
Query: 440 LQLFELMMQ-EDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMV 498
++++ M+ D PN +T ISV AC + + G + M E I+ + + ++
Sbjct: 218 KKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENH-IQMDLSLCNAVI 276
Query: 499 DLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVE--LAVKAANKFLQLEPHN 556
+ G L+ A + + M + S+ + A++ HG V+ +A+ + + + L N
Sbjct: 277 GFYAKCGSLDYARALFDEMS-EKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWN 335
Query: 557 AVPYVMLSN 565
A+ ++ N
Sbjct: 336 AMISGLMQN 344
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 141/330 (42%), Gaps = 14/330 (4%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T ++ + C D+ G +H I+ I L N Y+KCG+LD AR F
Sbjct: 236 TVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEM 295
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+ + +Y AII + H + A LF E+ + ++N +I+ H + F+
Sbjct: 296 SEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFR 355
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLV--MQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
E G + TLS ++ + L ++H FA+ G V +++ Y G
Sbjct: 356 EMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLG 415
Query: 196 LLSEAWRVFHEMGEGCRDE--ISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMA 253
L A RVF + C+D I+W A+I A + A LF +M +G K D T+
Sbjct: 416 FLLGAQRVF----DNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLT 471
Query: 254 SVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVG--SGLIDMYSKCAPRGMLDCMKVFEE 311
+VL+AF D M+ + ++ P V + ++ + S+ + D M+ +
Sbjct: 472 AVLSAFAHSGDSDMAQHIFDSML-TKYDIEPGVEHYACMVSVLSRAGK--LSDAMEFISK 528
Query: 312 IS-EPDLVLWNTMISGFSQHEDLSEDALIC 340
+ +P +W +++G S DL C
Sbjct: 529 MPIDPIAKVWGALLNGASVLGDLEIARFAC 558
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 281 bits (720), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 185/603 (30%), Positives = 308/603 (51%), Gaps = 46/603 (7%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIK-TFIPHSTYLSNHFTLLYSKCGT---LDNARTS 73
T+ ++ + +R+++ + L + K + +T +S Y CG L+ AR
Sbjct: 73 TWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISG-----YVSCGGIRFLEEARKL 127
Query: 74 FRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAV 133
F + + FS+N +I K+ + A LF+++P + VS++ +I GE AV
Sbjct: 128 FDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAV 187
Query: 134 RLFKE---AREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLAR 190
LF++ + LC ++G+IK R + +++ G N ++
Sbjct: 188 VLFRKMPVKDSSPLCA---LVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVG 244
Query: 191 YGGRGLLSEAWRVFHEMGEGCRDE-------------ISWNAMIVACGQCREGKEALVLF 237
YG RG + A +F ++ + C D+ +SWN+MI A + + A +LF
Sbjct: 245 YGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLF 304
Query: 238 GEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMI-KSGFNWNPHVGSGLIDMYSK 296
+M D + +++ + + + M + +WN M S
Sbjct: 305 DQM----KDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNM--------MVSG 352
Query: 297 CAPRGMLDCMK-VFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCS 355
A G ++ + FE+ E V WN++I+ + +++D E A+ F M G +PD +
Sbjct: 353 YASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKE-AVDLFIRMNIEGEKPDPHT 411
Query: 356 FSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTM 415
+ + SA + L + LG Q+H + +K+ IP V V+NAL+ MYS+CG + ++RR+FD M
Sbjct: 412 LTSLLSASTGLVNLRLGMQMHQIVVKTVIPD--VPVHNALITMYSRCGEIMESRRIFDEM 469
Query: 416 P-EHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEG 474
+ ++ N+MI GYA HG E+L LF M I P++ITF+SVL+ACAH G V+E
Sbjct: 470 KLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEA 529
Query: 475 QKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACR 534
+ F M + IEP+ +H+S +V++ G+ EEA II +MPF+P W ALL ACR
Sbjct: 530 KAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACR 589
Query: 535 KHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGC 594
+ NV LA AA +LEP ++ PYV+L NMYA G W+E++ V+ M + +KK+ G
Sbjct: 590 IYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGS 649
Query: 595 SWI 597
SW+
Sbjct: 650 SWV 652
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 180/402 (44%), Gaps = 59/402 (14%)
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
G ++EA +F ++ R+ ++WN MI + RE +A LF M K D+ T +
Sbjct: 54 GYIAEARDIFEKLE--ARNTVTWNTMISGYVKRREMNQARKLFDVMP----KRDVVTWNT 107
Query: 255 VLTAFTCLEDLAGGMQF--HGRMI------KSGFNWNPHVGSGLIDMYSKCAPRGMLDCM 306
+++ + GG++F R + + F+WN +I Y+K R + + +
Sbjct: 108 MISGYVS----CGGIRFLEEARKLFDEMPSRDSFSWNT-----MISGYAK--NRRIGEAL 156
Query: 307 KVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNL 366
+FE++ E + V W+ MI+GF Q+ ++ + A++ F+ M P C+ L
Sbjct: 157 LLFEKMPERNAVSWSAMITGFCQNGEV-DSAVVLFRKMPVKDSSP-LCALVAGLIKNERL 214
Query: 367 SSPS--LGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPE------- 417
S + LG+ ++ + D+ V N L+ Y + G + AR +FD +P+
Sbjct: 215 SEAAWVLGQYGSLVSGREDL----VYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHG 270
Query: 418 --------HNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTG 469
N VS NSMI Y + G + LF+ M D I++ +++ H
Sbjct: 271 GEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRD----TISWNTMIDGYVHVS 326
Query: 470 KVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAAL 529
++E+ F+ M + +A ++ MV G +E A E P + ++ W ++
Sbjct: 327 RMEDAFALFSEMPNR-----DAHSWNMMVSGYASVGNVELARHYFEKTP-EKHTVSWNSI 380
Query: 530 LGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAG 571
+ A K+ + + AV + + +E P+ + S + AS G
Sbjct: 381 IAAYEKNKDYKEAVDLFIR-MNIEGEKPDPHTLTSLLSASTG 421
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 79/143 (55%), Gaps = 7/143 (4%)
Query: 401 KCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFIS 460
+ G + +AR +F+ + NTV+ N+MI+GY + ++ +LF++M + D+V N T IS
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWN-TMIS 110
Query: 461 VLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFD 520
+C +EE +K F+ M + ++ ++ M+ + ++ EA + E MP +
Sbjct: 111 GYVSCGGIRFLEEARKLFDEMPSR-----DSFSWNTMISGYAKNRRIGEALLLFEKMP-E 164
Query: 521 PGSIEWAALLGACRKHGNVELAV 543
++ W+A++ ++G V+ AV
Sbjct: 165 RNAVSWSAMITGFCQNGEVDSAV 187
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 131/287 (45%), Gaps = 35/287 (12%)
Query: 308 VFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLS 367
+FE++ + V WNTMISG+ + ++++ A F M + D +++ + S +
Sbjct: 62 IFEKLEARNTVTWNTMISGYVKRREMNQ-ARKLFDVMPKR----DVVTWNTMISGYVSCG 116
Query: 368 SPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMI 427
++ L ++PS N +++ Y+K + +A +F+ MPE N VS ++MI
Sbjct: 117 GIRFLEEARKLF--DEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMI 174
Query: 428 TGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQ----KYFNMMKE 483
TG+ Q+G ++ LF M +D P ++++ ++ E +Y +++
Sbjct: 175 TGFCQNGEVDSAVVLFRKMPVKDSSP----LCALVAGLIKNERLSEAAWVLGQYGSLVS- 229
Query: 484 KFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMP--------------FDPGSIEWAAL 529
G E ++ ++ G+ G++E A + + +P F + W ++
Sbjct: 230 --GREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSM 287
Query: 530 LGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEES 576
+ A K G+V V A F Q++ + + + + + Y R E++
Sbjct: 288 IKAYLKVGDV---VSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDA 331
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 281 bits (718), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 198/696 (28%), Positives = 333/696 (47%), Gaps = 112/696 (16%)
Query: 19 FTNLLKQCISQRDISTGKSLHA-LYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
F +LL C++ + + +HA + + FI S L+ + +Y++ G L +AR
Sbjct: 59 FDHLLGLCLTAQQC---RQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDAR------ 109
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
NVF E + D+ +N+++ A+ G + A+ L++
Sbjct: 110 ---NVF-------------------ETVSLVLLSDLRLWNSILKANVSHGLYENALELYR 147
Query: 138 EAREAGLCLDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
R+ GL DG+ L +++ACR GL H + G V N +L Y G
Sbjct: 148 GMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAG 207
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
+ +A+ +F EM R+ +SWN MI Q + + A+ +F M R K D T SV
Sbjct: 208 RMGDAYNLFVEMP--VRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSV 265
Query: 256 LTAFT---------------------------------C--LEDLAGGMQFHGRMIKSGF 280
L+ + C LE L+ + HG +IK GF
Sbjct: 266 LSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGF 325
Query: 281 NWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGF------------- 327
+ LI +Y K + D +F +I + WN++I+ F
Sbjct: 326 EEYLPSRNALIHVYGKQGK--VKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLF 383
Query: 328 SQHEDLS-------------------------EDALICFQDMQRAGFRPDDCSFSCVTSA 362
S+ E+++ +D+L F+ MQ + + + C+ S
Sbjct: 384 SELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSI 443
Query: 363 CSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVS 422
C+ L + +LG+++H I++ + N + V NALV MY+KCG L + VF+ + + + +S
Sbjct: 444 CAELPALNLGREIHGHVIRTSMSEN-ILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLIS 502
Query: 423 LNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMK 482
NS+I GY HG ++L +F+ M+ P+ I ++VLSAC+H G VE+G++ F M
Sbjct: 503 WNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMS 562
Query: 483 EKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELA 542
++FG+EP+ +H++C+VDLLGR G L+EA I++ MP +P ALL +CR H NV++A
Sbjct: 563 KRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIA 622
Query: 543 VKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNK 602
A++ LEP Y++LSN+Y++ GRWEESA V+ L +++ +KK G SWI++ K
Sbjct: 623 EGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKK 682
Query: 603 VHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPD 638
+ F + + I+ + +++ M + G D
Sbjct: 683 KYKFSSGSIVQSEFETIYPVLEDLVSHMLKKGPTHD 718
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 279 bits (714), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 189/593 (31%), Positives = 306/593 (51%), Gaps = 10/593 (1%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTN 78
F+ L+ + + + + K +HA ++ +TY N LY K G++ NA F
Sbjct: 7 FSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIP 66
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
+ N ++N + K+ +L+ A +LFDE+P D+VS+NT+I+ G H +R+F +
Sbjct: 67 DKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFD 126
Query: 139 AREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCY-ASVCNAVLARYGGRGLL 197
+ + FT S ++ + V Q+H A+ G S Y V N+V+ Y G+
Sbjct: 127 MQRWEIRPTEFTFS-ILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVF 185
Query: 198 SEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLT 257
A VF M + RD +SWN +I++C + AL F M M ++ D +T++ V++
Sbjct: 186 DYALSVFLTMED--RDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVS 243
Query: 258 AFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDL 317
+ L +L+ G Q IK GF N V IDM+SKC + D +K+F E+ + D
Sbjct: 244 ICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKC--NRLDDSVKLFRELEKWDS 301
Query: 318 VLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHA 377
VL N+MI +S H EDAL F RPD +FS V S+ N G VH+
Sbjct: 302 VLCNSMIGSYSWHC-CGEDALRLFILAMTQSVRPDKFTFSSVLSSM-NAVMLDHGADVHS 359
Query: 378 LAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEG 437
L IK + +V +L+ MY K G++ A VF + + N++I G A++
Sbjct: 360 LVIKLGFDLD-TAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAV 418
Query: 438 ESLQLF-ELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSC 496
ESL +F +L+M + + P+ +T + +L AC + G V EG + F+ M++ G+ P +H++C
Sbjct: 419 ESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYAC 478
Query: 497 MVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHN 556
+++LL R G + EA+ I + +PF+P S W +L A G+ LA A L+ EP +
Sbjct: 479 IIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKS 538
Query: 557 AVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAE 609
+ PY++L +Y RWE S ++ M E +K G S I I++ V F A+
Sbjct: 539 SFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEAD 591
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 279 bits (713), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 165/475 (34%), Positives = 262/475 (55%), Gaps = 44/475 (9%)
Query: 188 LARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKI 247
L ++ L+ A +VF E+ E D IS A+I + EA F ++ +G++
Sbjct: 34 LVKHIDSDLIRNAHKVFDEIPE--LDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRP 91
Query: 248 DMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMK 307
+ FT +V+ + T D+ G Q H +K G N VGS +++ Y K + + D +
Sbjct: 92 NEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLST--LTDARR 149
Query: 308 VFEEISEPDLV-------------------------------LWNTMISGFSQHEDLSED 336
F++ +P++V WN +I GFSQ +E+
Sbjct: 150 CFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQ-TGRNEE 208
Query: 337 ALICFQDMQRAGFR-PDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNAL 395
A+ F DM R G P++ +F C +A SN++S GK +HA AIK V V N+L
Sbjct: 209 AVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSL 268
Query: 396 VAMYSKCGNLHDARRVFDTMPE--HNTVSLNSMITGYAQHGVEGESLQLFELMMQE-DIV 452
++ YSKCGN+ D+ F+ + E N VS NSMI GYA +G E++ +FE M+++ ++
Sbjct: 269 ISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLR 328
Query: 453 PNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEP---EAKHFSCMVDLLGRAGKLEE 509
PNN+T + VL AC H G ++EG YFN + +P E +H++CMVD+L R+G+ +E
Sbjct: 329 PNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKE 387
Query: 510 AERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYAS 569
AE +I++MP DPG W ALLG C+ H N LA AA+K L+L+P + YVMLSN Y++
Sbjct: 388 AEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSA 447
Query: 570 AGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMG 624
W+ + ++R M+E G+K+ GCSWI++ +++ VFV D ++ + E++ +
Sbjct: 448 MENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLA 502
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 162/382 (42%), Gaps = 50/382 (13%)
Query: 76 LTNNPNVFSYNAIIDACVKHSHLHLAR---ELFDEIPRPDIVSYNTLIAAHAHRGEHGPA 132
+T +PN I VKH L R ++FDEIP D++S +I H A
Sbjct: 24 VTKSPNS------IPELVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEA 77
Query: 133 VRLFKEAREAGLCLDGFTLSGVI--KACREDVGLVMQLHCFAVLCGYSCYASVCNAVLAR 190
+ FK G+ + FT VI DV L QLHC+A+ G + V +AVL
Sbjct: 78 SQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNC 137
Query: 191 YGGRGLLSEAWRVF---------------------HEMGEGC--------RDEISWNAMI 221
Y L++A R F HE E R ++WNA+I
Sbjct: 138 YVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVI 197
Query: 222 VACGQCREGKEALVLFGEMVRMGMKI-DMFTMASVLTAFTCLEDLAGGMQFHGRMIKS-G 279
Q +EA+ F +M+R G+ I + T +TA + + G H IK G
Sbjct: 198 GGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLG 257
Query: 280 FNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEP--DLVLWNTMISGFSQHEDLSEDA 337
+N V + LI YSKC M D + F ++ E ++V WN+MI G++ H E+A
Sbjct: 258 KRFNVFVWNSLISFYSKCG--NMEDSLLAFNKLEEEQRNIVSWNSMIWGYA-HNGRGEEA 314
Query: 338 LICFQDMQR-AGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNN--A 394
+ F+ M + RP++ + V AC++ G A+ N + + +
Sbjct: 315 VAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYAC 374
Query: 395 LVAMYSKCGNLHDARRVFDTMP 416
+V M S+ G +A + +MP
Sbjct: 375 MVDMLSRSGRFKEAEELIKSMP 396
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 141/333 (42%), Gaps = 29/333 (8%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF ++ + RD+ GK LH +K + + ++ + Y K TL +AR F T
Sbjct: 95 TFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDT 154
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+PNV S +I +K A LF +P +V++N +I + G + AV F
Sbjct: 155 RDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFV 214
Query: 138 EA-REAGLCLDGFTLSGVIKACREDV--GLVMQLHCFAV-LCGYSCYASVCNAVLARYGG 193
+ RE + + T I A G +H A+ G V N++++ Y
Sbjct: 215 DMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSK 274
Query: 194 RGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVR-MGMKIDMFTM 252
G + ++ F+++ E R+ +SWN+MI G+EA+ +F +MV+ ++ + T+
Sbjct: 275 CGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTI 334
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSGFNW-----NPHVGSGLIDMYSKCAPRGMLDCMK 307
VL F C H +I+ G+ + N + L+++ ML
Sbjct: 335 LGVL--FAC---------NHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSG 383
Query: 308 VFEEISE--------PDLVLWNTMISGFSQHED 332
F+E E P + W ++ G H +
Sbjct: 384 RFKEAEELIKSMPLDPGIGFWKALLGGCQIHSN 416
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 279 bits (713), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 183/530 (34%), Positives = 285/530 (53%), Gaps = 27/530 (5%)
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHR-GEHGPAVRL---- 135
++F N ++ A K A +LFDE+P +IV++N LI R G+ L
Sbjct: 70 SLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCY 129
Query: 136 FKEAREAGLCLDGFTLSGVIKACREDVGLV--MQLHCFAVLCGY--SCYASVCNAVLARY 191
+ LD + G+I+ C + + +QLHC V G SC+ S +++ Y
Sbjct: 130 LSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPST--SLVHFY 187
Query: 192 GGRGLLSEAWRVFHEMGEGCRDEISWNAMI---VACGQCREGKEALVLFGEMVRMGMKID 248
G GL+ EA RVF + + RD + WNA++ V G E L L G + + D
Sbjct: 188 GKCGLIVEARRVFEAVLD--RDLVLWNALVSSYVLNGMIDEAFGLLKLMGS-DKNRFRGD 244
Query: 249 MFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKV 308
FT +S+L+A C + G Q H + K + ++ V + L++MY+K + D +
Sbjct: 245 YFTFSSLLSA--C--RIEQGKQIHAILFKVSYQFDIPVATALLNMYAK--SNHLSDAREC 298
Query: 309 FEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSS 368
FE + ++V WN MI GF+Q+ + +A+ F M +PD+ +F+ V S+C+ S+
Sbjct: 299 FESMVVRNVVSWNAMIVGFAQNGE-GREAMRLFGQMLLENLQPDELTFASVLSSCAKFSA 357
Query: 369 PSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMIT 428
KQV A+ K ++ +SV N+L++ YS+ GNL +A F ++ E + VS S+I
Sbjct: 358 IWEIKQVQAMVTKKG-SADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIG 416
Query: 429 GYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIE 488
A HG ESLQ+FE M+Q+ + P+ ITF+ VLSAC+H G V+EG + F M E + IE
Sbjct: 417 ALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIE 475
Query: 489 PEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANK 548
E +H++C++DLLGRAG ++EA ++ +MP +P + AA G C H E A K
Sbjct: 476 AEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKK 535
Query: 549 FLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVK-KKPGCSWI 597
L++EP V Y +LSN Y S G W ++A +++ R K PGCSW+
Sbjct: 536 LLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 174/417 (41%), Gaps = 47/417 (11%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
+F L++ C ++ G LH L +K + S + S Y KCG + AR F
Sbjct: 144 SFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFE-- 201
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
A++D D+V +N L++++ G A L K
Sbjct: 202 ---------AVLD--------------------RDLVLWNALVSSYVLNGMIDEAFGLLK 232
Query: 138 -----EAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYG 192
+ R G D FT S ++ ACR + G Q+H Y V A+L Y
Sbjct: 233 LMGSDKNRFRG---DYFTFSSLLSACRIEQG--KQIHAILFKVSYQFDIPVATALLNMYA 287
Query: 193 GRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTM 252
LS+A F M R+ +SWNAMIV Q EG+EA+ LFG+M+ ++ D T
Sbjct: 288 KSNHLSDARECFESM--VVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTF 345
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEI 312
ASVL++ + Q + K G V + LI YS+ + + + F I
Sbjct: 346 ASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNG--NLSEALLCFHSI 403
Query: 313 SEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLG 372
EPDLV W ++I + H +E++L F+ M + +PD +F V SACS+ G
Sbjct: 404 REPDLVSWTSVIGALASH-GFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEG 461
Query: 373 KQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITG 429
+ + L+ + + G + +A V ++MP + + TG
Sbjct: 462 LRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTG 518
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 170/350 (48%), Gaps = 23/350 (6%)
Query: 262 LEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWN 321
L+ L+ Q HG M+K G + + + L+ Y+K R D K+F+E+ ++V WN
Sbjct: 49 LDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKI--REFDDADKLFDEMPLRNIVTWN 106
Query: 322 TMISGFSQHE-DLSEDALICFQDMQRAGFRP---DDCSFSCVTSACSNLSSPSLGKQVHA 377
+I G Q + D + A + F + R F D SF + C++ ++ G Q+H
Sbjct: 107 ILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHC 166
Query: 378 LAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEG 437
L +K + S+ + +LV Y KCG + +ARRVF+ + + + V N++++ Y +G+
Sbjct: 167 LMVKQGLESSCFP-STSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMID 225
Query: 438 ESLQLFELMMQED--IVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFS 495
E+ L +LM + + TF S+LSAC ++E+G++ ++ K + + +
Sbjct: 226 EAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILF-KVSYQFDIPVAT 280
Query: 496 CMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFL--QLE 553
++++ ++ L +A E+M + W A++ ++G A++ + L L+
Sbjct: 281 ALLNMYAKSNHLSDARECFESMVV-RNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQ 339
Query: 554 PHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKV 603
P +LS+ + WE +K++ + V KK ++ + N +
Sbjct: 340 PDELTFASVLSSCAKFSAIWE----IKQV--QAMVTKKGSADFLSVANSL 383
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 278 bits (711), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 207/695 (29%), Positives = 331/695 (47%), Gaps = 107/695 (15%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSN--HFTLL---YSKCGTLDNARTS 73
F+N ++ + R +S G +HA ++ IP ++ ++T L Y+K G LD AR
Sbjct: 42 FSN--EEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVL 99
Query: 74 FRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAV 133
F + N+ + NA++ VK ++ A LF E+P+ ++VS+ ++ A G AV
Sbjct: 100 FEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK-NVVSWTVMLTALCDDGRSEDAV 158
Query: 134 RLFKEAREAGLCLDGFTLSGVIK--------------ACREDVGLVMQLHCF-------- 171
LF E E + ++G+I+ R+ V + +
Sbjct: 159 ELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEE 218
Query: 172 -AVLCGYSCYASVCNAVLARYG--GRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCR 228
+L G +V YG G + EA+R+F EM E R+ +SW AMI
Sbjct: 219 AKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPE--RNIVSWTAMISGFAWNE 276
Query: 229 EGKEALVLFGEMVRMGMKIDMFTMASVLTAFTC----LEDLAGGMQFHGRMIKSGFNWNP 284
+EAL+LF EM + + + A+ C +E G Q H ++I +G+
Sbjct: 277 LYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVD 336
Query: 285 HVG------------SGLI----------------------------------------D 292
H G SGLI
Sbjct: 337 HDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKS 396
Query: 293 MYSKCAPRGMLD----------CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQ 342
++ K + M+D +F+++ + D V W MISG Q+E +E A +
Sbjct: 397 LHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASL-LS 455
Query: 343 DMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSN-RVSVNNALVAMYSK 401
DM R G +P + ++S + S+ S+ GK +H + K+ + + + N+LV+MY+K
Sbjct: 456 DMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAK 515
Query: 402 CGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISV 461
CG + DA +F M + +TVS NSMI G + HG+ ++L LF+ M+ PN++TF+ V
Sbjct: 516 CGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGV 575
Query: 462 LSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDP 521
LSAC+H+G + G + F MKE + I+P H+ M+DLLGRAGKL+EAE I +PF P
Sbjct: 576 LSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTP 635
Query: 522 GSIEWAALLGAC----RKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESA 577
+ ALLG C R +A +AA + L+L+P NA +V L N+YA GR +
Sbjct: 636 DHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEK 695
Query: 578 TVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSS 612
+++ M +GVKK PGCSW+ ++ + +VF++ D S
Sbjct: 696 EMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKS 730
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 121/561 (21%), Positives = 221/561 (39%), Gaps = 107/561 (19%)
Query: 80 PNVFSYN-------AIIDACVKHSHLHLARELFDEIPRPD----IVSYNTLIAAHAHRGE 128
PN SY A+I + L AR L D+IP+ +V + +L++ +A G
Sbjct: 33 PNYGSYRRGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGY 92
Query: 129 HGPAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSC-YASVCNAV 187
A LF+ E + L+G +K R + + + ++ ++C+
Sbjct: 93 LDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCD-- 150
Query: 188 LARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKI 247
G +A +F EM E R+ +SWN ++ + + ++A +F M
Sbjct: 151 ------DGRSEDAVELFDEMPE--RNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR---- 198
Query: 248 DMFTMASVLTAFTCLEDLAGGMQFHGRMI-KSGFNWNPHVGSGLIDMYSKCAPRGMLDCM 306
D+ + +++ + + + G M K+ W V Y C + +
Sbjct: 199 DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMV-------YGYCRYGDVREAY 251
Query: 307 KVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRA--GFRPDDCSFSCVTSACS 364
++F E+ E ++V W MISGF+ +E L +AL+ F +M++ P+ + + AC
Sbjct: 252 RLFCEMPERNIVSWTAMISGFAWNE-LYREALMLFLEMKKDVDAVSPNGETLISLAYACG 310
Query: 365 NLSSP--SLGKQVHALAIKSD-----------------------IPSNRVSVN------- 392
L LG+Q+HA I + I S + +N
Sbjct: 311 GLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQS 370
Query: 393 -NALVAMYSKCGNLHDARRVFDTMPE-HNTVSLNSMITGYAQHGVEGESLQLFELMMQED 450
N ++ Y K G+L A +F+ + H+ VS SMI GY + G + LF+ + +D
Sbjct: 371 CNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKD 430
Query: 451 IV-------------------------------PNNITFISVLSACAHTGKVEEGQKYFN 479
V P N T+ +LS+ T +++G+
Sbjct: 431 GVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHC 490
Query: 480 MM-KEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGN 538
++ K +P+ + +V + + G +E+A I M ++ W +++ HG
Sbjct: 491 VIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM-VQKDTVSWNSMIMGLSHHG- 548
Query: 539 VELAVKAANKFLQLEPHNAVP 559
LA KA N F ++ P
Sbjct: 549 --LADKALNLFKEMLDSGKKP 567
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHST--YLSNHFTLLYSKCGTLDNARTSFR 75
T++ LL + ++ GK +H + KT + L N +Y+KCG +++A F
Sbjct: 468 TYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFA 527
Query: 76 LTNNPNVFSYNAIIDACVKH----SHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGP 131
+ S+N++I H L+L +E+ D +P+ V++ +++A +H G
Sbjct: 528 KMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITR 587
Query: 132 AVRLFKEAREA 142
+ LFK +E
Sbjct: 588 GLELFKAMKET 598
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 170/523 (32%), Positives = 275/523 (52%), Gaps = 12/523 (2%)
Query: 83 FSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREA 142
+ NA++ + + +AR++FD + D++S+NT+I+ + G A+ +F
Sbjct: 153 YVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNE 212
Query: 143 GLCLDGFTLSGVIKAC--REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEA 200
+ LD T+ ++ C +D+ + +H V NA++ Y G + EA
Sbjct: 213 SVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEA 272
Query: 201 WRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFT 260
VF M RD I+W MI + + + AL L M G++ + T+AS+++
Sbjct: 273 RFVFDRMER--RDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCG 330
Query: 261 CLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLW 320
+ G HG ++ + + + LI MY+KC + C +VF S+ W
Sbjct: 331 DALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDL--CFRVFSGASKYHTGPW 388
Query: 321 NTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAI 380
+ +I+G Q+E L DAL F+ M+R P+ + + + A + L+ +H
Sbjct: 389 SAIIAGCVQNE-LVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLT 447
Query: 381 KSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH----NTVSLNSMITGYAQHGVE 436
K+ S+ + LV +YSKCG L A ++F+ + E + V ++I+GY HG
Sbjct: 448 KTGFMSS-LDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDG 506
Query: 437 GESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSC 496
+LQ+F M++ + PN ITF S L+AC+H+G VEEG F M E + + H++C
Sbjct: 507 HNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTC 566
Query: 497 MVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHN 556
+VDLLGRAG+L+EA +I T+PF+P S W ALL AC H NV+L AANK +LEP N
Sbjct: 567 IVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPEN 626
Query: 557 AVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQI 599
YV+L+N+YA+ GRW++ V+ +M G++KKPG S I+I
Sbjct: 627 TGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 144/502 (28%), Positives = 243/502 (48%), Gaps = 25/502 (4%)
Query: 97 HLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGL-CL-DGFTLSGV 154
H+ AR+LF+E+P+ ++SYN +I + G + A+ +F G+ C+ DG+T V
Sbjct: 64 HITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFV 123
Query: 155 IKACRE----DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEG 210
KA E +GLV+ G Y V NA+LA Y G + A VF M
Sbjct: 124 AKAAGELKSMKLGLVVHGRILRSWFGRDKY--VQNALLAMYMNFGKVEMARDVFDVMKN- 180
Query: 211 CRDEISWNAMIVACGQCREG--KEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGG 268
RD ISWN MI G R G +AL++F MV + +D T+ S+L L+DL G
Sbjct: 181 -RDVISWNTMI--SGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMG 237
Query: 269 MQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFS 328
H + + V + L++MY KC M + VF+ + D++ W MI+G++
Sbjct: 238 RNVHKLVEEKRLGDKIEVKNALVNMYLKCGR--MDEARFVFDRMERRDVITWTCMINGYT 295
Query: 329 QHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNR 388
+ D+ E+AL + MQ G RP+ + + + S C + + GK +H A++ + S+
Sbjct: 296 EDGDV-ENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSD- 353
Query: 389 VSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQ 448
+ + +L++MY+KC + RVF +++T +++I G Q+ + ++L LF+ M +
Sbjct: 354 IIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRR 413
Query: 449 EDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLE 508
ED+ PN T S+L A A + + + K G + +V + + G LE
Sbjct: 414 EDVEPNIATLNSLLPAYAALADLRQAMNIHCYLT-KTGFMSSLDAATGLVHVYSKCGTLE 472
Query: 509 EAERI---IETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ--LEPHNAVPYVML 563
A +I I+ + W AL+ HG+ A++ + ++ + P N + +
Sbjct: 473 SAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTP-NEITFTSA 531
Query: 564 SNMYASAGRWEESATVKRLMRE 585
N + +G EE T+ R M E
Sbjct: 532 LNACSHSGLVEEGLTLFRFMLE 553
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 153/303 (50%), Gaps = 12/303 (3%)
Query: 254 SVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEIS 313
S+L F + ++ H +I G + H+ S L Y+ C + K+FEE+
Sbjct: 20 SLLNHFAATQSISKTKALHCHVITGG-RVSGHILSTLSVTYALCGH--ITYARKLFEEMP 76
Query: 314 EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFR--PDDCSFSCVTSACSNLSSPSL 371
+ L+ +N +I + + E L DA+ F M G + PD ++ V A L S L
Sbjct: 77 QSSLLSYNIVIRMYVR-EGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKL 135
Query: 372 GKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYA 431
G VH ++S ++ V NAL+AMY G + AR VFD M + +S N+MI+GY
Sbjct: 136 GLVVHGRILRSWFGRDKY-VQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYY 194
Query: 432 QHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEK-FGIEPE 490
++G ++L +F+ M+ E + ++ T +S+L C H +E G+ +++EK G + E
Sbjct: 195 RNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIE 254
Query: 491 AKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFL 550
K + +V++ + G+++EA + + M I W ++ + G+VE A++ + +
Sbjct: 255 VK--NALVNMYLKCGRMDEARFVFDRME-RRDVITWTCMINGYTEDGDVENALELC-RLM 310
Query: 551 QLE 553
Q E
Sbjct: 311 QFE 313
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 98/247 (39%), Gaps = 39/247 (15%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T +L+ C ++ GK LH ++ + + +Y+KC +D F
Sbjct: 321 TIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGA 380
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAV 133
+ + ++AII CV++ + A LF + R P+I + N+L+ PA
Sbjct: 381 SKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLL----------PAY 430
Query: 134 RLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGG 193
+ R+A M +HC+ G+ ++ Y
Sbjct: 431 AALADLRQA-----------------------MNIHCYLTKTGFMSSLDAATGLVHVYSK 467
Query: 194 RGLLSEAWRVFHEMGE--GCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFT 251
G L A ++F+ + E +D + W A+I G +G AL +F EMVR G+ + T
Sbjct: 468 CGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEIT 527
Query: 252 MASVLTA 258
S L A
Sbjct: 528 FTSALNA 534
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 276 bits (706), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 177/556 (31%), Positives = 300/556 (53%), Gaps = 19/556 (3%)
Query: 86 NAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLC 145
N++++ K H+ A++LFD++ + D+VS+NT+I+ +A G ++L R GL
Sbjct: 183 NSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLR 242
Query: 146 LD----GFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAW 201
D G +LS C ++G + LHC V G+ + A++ Y G ++
Sbjct: 243 PDQQTFGASLSVSGTMCDLEMGRM--LHCQIVKTGFDVDMHLKTALITMYLKCGKEEASY 300
Query: 202 RVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTC 261
RV + +D + W MI + ++AL++F EM++ G + +ASV+ +
Sbjct: 301 RVLETIPN--KDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQ 358
Query: 262 LEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD-CMKVFEEISEPDLVLW 320
L G HG +++ G+ + + LI MY+KC G LD + +FE ++E DLV W
Sbjct: 359 LGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKC---GHLDKSLVIFERMNERDLVSW 415
Query: 321 NTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVT--SACSNLSSPSLGKQVHAL 378
N +ISG++Q+ DL + AL+ F++M+ + D SF+ V+ ACS+ + +GK +H +
Sbjct: 416 NAIISGYAQNVDLCK-ALLLFEEMKFKTVQQVD-SFTVVSLLQACSSAGALPVGKLIHCI 473
Query: 379 AIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGE 438
I+S I + V+ ALV MYSKCG L A+R FD++ + VS +I GY HG
Sbjct: 474 VIRSFIRPCSL-VDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDI 532
Query: 439 SLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMV 498
+L+++ + + PN++ F++VLS+C+H G V++G K F+ M FG+EP +H +C+V
Sbjct: 533 ALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVV 592
Query: 499 DLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAV 558
DLL RA ++E+A + + P +L ACR +G E+ ++L+P +A
Sbjct: 593 DLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAG 652
Query: 559 PYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKE 618
YV L + +A+ RW++ + MR G+KK PG S I+++ K F +SH +
Sbjct: 653 HYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHS--DD 710
Query: 619 IHEYMGEMLRKMKQAG 634
+ + R+M Q G
Sbjct: 711 TVSLLKLLSREMMQFG 726
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 159/578 (27%), Positives = 277/578 (47%), Gaps = 49/578 (8%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF +LLK C S + +S G S+H + Y+S+ LY+K G L +AR
Sbjct: 48 TFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHAR------ 101
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
++F+E+ D+V + +I ++ G G A L
Sbjct: 102 -------------------------KVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVN 136
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQLHC---FAVLCGYSCYASVCNAVLARYGGR 194
E R G+ TL ++ E + QL C FAV+ G+ C +V N++L Y
Sbjct: 137 EMRFQGIKPGPVTLLEMLSGVLE----ITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKC 192
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
+ +A +F +M + RD +SWN MI E L L M G++ D T +
Sbjct: 193 DHVGDAKDLFDQMEQ--RDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGA 250
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISE 314
L+ + DL G H +++K+GF+ + H+ + LI MY KC +V E I
Sbjct: 251 SLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEA--SYRVLETIPN 308
Query: 315 PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQ 374
D+V W MISG + +E ALI F +M ++G + + V ++C+ L S LG
Sbjct: 309 KDVVCWTVMISGLMRLGR-AEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGAS 367
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHG 434
VH ++ + ++ N+L+ MY+KCG+L + +F+ M E + VS N++I+GYAQ+
Sbjct: 368 VHGYVLRHGYTLDTPAL-NSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNV 426
Query: 435 VEGESLQLFELMMQEDIVP-NNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKH 493
++L LFE M + + ++ T +S+L AC+ G + G+ ++ F I P +
Sbjct: 427 DLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRPCSLV 485
Query: 494 FSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ-- 551
+ +VD+ + G LE A+R +++ + + W L+ HG ++A++ ++FL
Sbjct: 486 DTALVDMYSKCGYLEAAQRCFDSISWKD-VVSWGILIAGYGFHGKGDIALEIYSEFLHSG 544
Query: 552 LEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVK 589
+EP++ + +LS+ + + ++R+ GV+
Sbjct: 545 MEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVE 582
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 218/466 (46%), Gaps = 27/466 (5%)
Query: 116 YNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAV 173
+N+ I + G+H + F L D FT ++KAC + + + +H +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 174 LCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEA 233
+ G+S + ++++ Y GLL+ A +VF EM E RD + W AMI + EA
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRE--RDVVHWTAMIGCYSRAGIVGEA 131
Query: 234 LVLFGEMVRMGMK------IDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVG 287
L EM G+K ++M + +T CL D A + GF+ + V
Sbjct: 132 CSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFA---------VIYGFDCDIAVM 182
Query: 288 SGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRA 347
+ ++++Y KC G D +F+++ + D+V WNTMISG++ ++SE + ++ M+
Sbjct: 183 NSMLNLYCKCDHVG--DAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYR-MRGD 239
Query: 348 GFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHD 407
G RPD +F S + +G+ +H +K+ + + + AL+ MY KCG
Sbjct: 240 GLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVD-MHLKTALITMYLKCGKEEA 298
Query: 408 ARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAH 467
+ RV +T+P + V MI+G + G ++L +F M+Q ++ SV+++CA
Sbjct: 299 SYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQ 358
Query: 468 TGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWA 527
G + G + + G + + ++ + + G L+++ I E M + + W
Sbjct: 359 LGSFDLGASVHGYVL-RHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWN 416
Query: 528 ALLGACRKHGNV--ELAVKAANKFLQLEPHNAVPYVMLSNMYASAG 571
A++ ++ ++ L + KF ++ ++ V L +SAG
Sbjct: 417 AIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAG 462
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 14/156 (8%)
Query: 418 HNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEG--- 474
++T NS I + HG + L F M+ ++P+ TF S+L ACA ++ G
Sbjct: 9 NSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSI 68
Query: 475 --QKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGA 532
Q N F I S +V+L + G L A ++ E M + + W A++G
Sbjct: 69 HQQVLVNGFSSDFYIS------SSLVNLYAKFGLLAHARKVFEEMR-ERDVVHWTAMIGC 121
Query: 533 CRKHGNVELAVKAAN--KFLQLEPHNAVPYVMLSNM 566
+ G V A N +F ++P MLS +
Sbjct: 122 YSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGV 157
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 275 bits (702), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 202/630 (32%), Positives = 308/630 (48%), Gaps = 58/630 (9%)
Query: 49 HSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAIID-----------ACVKHSH 97
S L++ +L C N+R F+ + +N I D A +
Sbjct: 29 QSLQLNHQSLVLLENC----NSRNQFKQVL-AQIMRFNLICDTFPMSRLIFFSAITYPEN 83
Query: 98 LHLARELF-DEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIK 156
L LA+ LF + P P++ YNT+I+A + L+ + D T ++K
Sbjct: 84 LDLAKLLFLNFTPNPNVFVYNTMISAVS--SSKNECFGLYSSMIRHRVSPDRQTFLYLMK 141
Query: 157 ACREDVGLVMQLHCFAVLCG-YSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEI 215
A + V Q+HC ++ G S + N+++ Y G A +VF M D
Sbjct: 142 AS-SFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHP--DVS 198
Query: 216 SWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRM 275
S+N MIV + EAL L+ +MV G++ D +T+ S+L L D+ G HG +
Sbjct: 199 SFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWI 258
Query: 276 IKSG--FNWNPHVGSGLIDMYSKCAPRGM----LDCMK---------------------- 307
+ G ++ N + + L+DMY KC G+ D MK
Sbjct: 259 ERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEA 318
Query: 308 ---VFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRA-GFRPDDCSFSCVTSAC 363
VF+++ + DLV WN+++ G+S+ F +M +PD + + S
Sbjct: 319 AQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGA 378
Query: 364 SNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSL 423
+N S G+ VH L I+ + + +++AL+ MY KCG + A VF T E +
Sbjct: 379 ANNGELSHGRWVHGLVIRLQLKGDAF-LSSALIDMYCKCGIIERAFMVFKTATEKDVALW 437
Query: 424 NSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKE 483
SMITG A HG ++LQLF M +E + PNN+T ++VL+AC+H+G VEEG FN MK+
Sbjct: 438 TSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKD 497
Query: 484 KFGIEPEAKHFSCMVDLLGRAGKLEEAERIIE-TMPFDPGSIEWAALLGACRKHGNVELA 542
KFG +PE +H+ +VDLL RAG++EEA+ I++ MP P W ++L ACR ++E A
Sbjct: 498 KFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETA 557
Query: 543 VKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNK 602
A + L+LEP YV+LSN+YA+ GRW S + M RGVKK G S +
Sbjct: 558 ELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEG 617
Query: 603 VHVFV-AEDSSHPMIKEIHEYMGEMLRKMK 631
+H FV AE +HP EI + + +MK
Sbjct: 618 LHRFVAAEKQNHPRWTEIKRILQHLYNEMK 647
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 191/617 (30%), Positives = 312/617 (50%), Gaps = 78/617 (12%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF LLK C D+ G+ LHA +KT F
Sbjct: 33 TFPPLLKSCAKLGDVVQGRILHAQVVKT---------GFFV------------------- 64
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+VF+ A++ +K + A ++ DE+P I S N ++ G A R+F
Sbjct: 65 ---DVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFG 121
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLL 197
+AR +G ++ T++ V+ C D+ MQLHC A+ G+ V ++++ Y G
Sbjct: 122 DARVSGSGMNSVTVASVLGGCG-DIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEW 180
Query: 198 SEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALV--LFGEMVRMGM-KIDMFTMAS 254
A R+F ++ + +++NA I G G LV +F M + + + T +
Sbjct: 181 VLAARMFEKVPH--KSVVTYNAFI--SGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVN 236
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKC----------------- 297
+TA L +L G Q HG ++K F + VG+ LIDMYSKC
Sbjct: 237 AITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTR 296
Query: 298 -------APRGML------DCMKVFEEIS----EPDLVLWNTMISGFSQHEDLSEDALIC 340
GM+ +++FE++ +PD WN++ISGFSQ + E A
Sbjct: 297 NLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIE-AFKF 355
Query: 341 FQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYS 400
F+ M P + + SACS++ + GK++H IK+ + + V +L+ MY
Sbjct: 356 FERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERD-IFVLTSLIDMYM 414
Query: 401 KCGNLHDARRVFDTM--PEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITF 458
KCG ARR+FD + V N MI+GY +HG ++++FEL+ +E + P+ TF
Sbjct: 415 KCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATF 474
Query: 459 ISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMP 518
+VLSAC+H G VE+G + F +M+E++G +P +H CM+DLLGR+G+L EA+ +I+ M
Sbjct: 475 TAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMS 534
Query: 519 FDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESAT 578
S+ ++LLG+CR+H + L +AA K +LEP N P+V+LS++YA+ RWE+ +
Sbjct: 535 EPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVES 593
Query: 579 VKRLMRERGVKKKPGCS 595
+++++ ++ + K PG S
Sbjct: 594 IRQVIDQKQLVKLPGLS 610
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 135/484 (27%), Positives = 227/484 (46%), Gaps = 63/484 (13%)
Query: 149 FTLSGVIKACREDVGLVMQ---LHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFH 205
FT ++K+C + +G V+Q LH V G+ A+++ Y +++A +V
Sbjct: 32 FTFPPLLKSCAK-LGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLD 90
Query: 206 EMGEGCRDEISWNAMIVAC---GQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCL 262
EM E R S NA + G CR+ A +FG+ G ++ T+ASVL
Sbjct: 91 EMPE--RGIASVNAAVSGLLENGFCRD---AFRMFGDARVSGSGMNSVTVASVLGG---C 142
Query: 263 EDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNT 322
D+ GGMQ H +KSGF +VG+ L+ MYS+C + ++FE++ +V +N
Sbjct: 143 GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVL--AARMFEKVPHKSVVTYNA 200
Query: 323 MISGFSQHEDLSEDALICFQDMQR-AGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIK 381
ISG ++ ++ + F M++ + P+D +F +AC++L + G+Q+H L +K
Sbjct: 201 FISGLMENGVMNLVPSV-FNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMK 259
Query: 382 SDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPE-HNTVSLNSMITGYAQHGVEGESL 440
+ + V AL+ MYSKC A VF + + N +S NS+I+G +G ++
Sbjct: 260 KEFQFETM-VGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAV 318
Query: 441 QLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMM------------------- 481
+LFE + E + P++ T+ S++S + GKV E K+F M
Sbjct: 319 ELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSAC 378
Query: 482 ---------KEKFG--IEPEAKH----FSCMVDLLGRAGKLEEAERI---IETMPFDPGS 523
KE G I+ A+ + ++D+ + G A RI E P DP
Sbjct: 379 SDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDP-- 436
Query: 524 IEWAALLGACRKHGNVELAVKAANKFLQ--LEPHNAVPYVMLSNMYASAGRWEESATVKR 581
+ W ++ KHG E A++ + +EP A +LS + G E+ + + R
Sbjct: 437 VFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSAC-SHCGNVEKGSQIFR 495
Query: 582 LMRE 585
LM+E
Sbjct: 496 LMQE 499
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 10/214 (4%)
Query: 351 PDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARR 410
P+ +F + +C+ L G+ +HA +K+ + V ALV+MY K + DA +
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVD-VFTATALVSMYMKVKQVTDALK 87
Query: 411 VFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGK 470
V D MPE S+N+ ++G ++G ++ ++F N++T SVL C G
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GD 144
Query: 471 VEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALL 530
+E G + + + K G E E + +V + R G+ A R+ E +P + + A +
Sbjct: 145 IEGGMQ-LHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVP-HKSVVTYNAFI 202
Query: 531 GACRKHGNVELAVKAAN---KFLQLEPHNAVPYV 561
++G + L N KF EP N V +V
Sbjct: 203 SGLMENGVMNLVPSVFNLMRKFSSEEP-NDVTFV 235
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 273 bits (698), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 146/434 (33%), Positives = 245/434 (56%), Gaps = 34/434 (7%)
Query: 217 WNAMIVACGQCREGKEALVLFGEMVRMGMKI-DMFTMASVLTAFTCLEDLAGGMQFHGRM 275
+N++I A + + ++ +++R ++ D FT + + L G Q HG +
Sbjct: 76 YNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHL 135
Query: 276 IKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSE 335
K G ++ + LIDMY K ++D KVF+E+ E D++ WN+++SG+++ + +
Sbjct: 136 CKFGPRFHVVTENALIDMYMKF--DDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKK 193
Query: 336 ------------------------------DALICFQDMQRAGFRPDDCSFSCVTSACSN 365
+A+ F++MQ AG PD+ S V +C+
Sbjct: 194 AKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQ 253
Query: 366 LSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNS 425
L S LGK +H A + + V NAL+ MYSKCG + A ++F M + +S ++
Sbjct: 254 LGSLELGKWIHLYAERRGFL-KQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWST 312
Query: 426 MITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKF 485
MI+GYA HG +++ F M + + PN ITF+ +LSAC+H G +EG +YF+MM++ +
Sbjct: 313 MISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDY 372
Query: 486 GIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKA 545
IEP+ +H+ C++D+L RAGKLE A I +TMP P S W +LL +CR GN+++A+ A
Sbjct: 373 QIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVA 432
Query: 546 ANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHV 605
+ ++LEP + YV+L+N+YA G+WE+ + +++++R +KK PG S I+++N V
Sbjct: 433 MDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQE 492
Query: 606 FVAEDSSHPMIKEI 619
FV+ D+S P EI
Sbjct: 493 FVSGDNSKPFWTEI 506
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 154/313 (49%), Gaps = 39/313 (12%)
Query: 307 KVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFR-PDDCSFSCVTSACSN 365
++F ++S P++ L+N++I ++ H L D + ++ + R F PD +F + +C++
Sbjct: 63 RLFNQVSNPNVFLYNSIIRAYT-HNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCAS 121
Query: 366 LSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNS 425
L S LGKQVH K P V NAL+ MY K +L DA +VFD M E + +S NS
Sbjct: 122 LGSCYLGKQVHGHLCKFG-PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNS 180
Query: 426 MITGYAQHGVEGESLQLFELMMQEDIV-------------------------------PN 454
+++GYA+ G ++ LF LM+ + IV P+
Sbjct: 181 LLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPD 240
Query: 455 NITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERII 514
I+ ISVL +CA G +E G K+ ++ E+ G + + ++++ + G + +A ++
Sbjct: 241 EISLISVLPSCAQLGSLELG-KWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLF 299
Query: 515 ETMPFDPGSIEWAALLGACRKHGNVELAVKAANKF--LQLEPHNAVPYVMLSNMYASAGR 572
M I W+ ++ HGN A++ N+ +++P N + ++ L + + G
Sbjct: 300 GQME-GKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKP-NGITFLGLLSACSHVGM 357
Query: 573 WEESATVKRLMRE 585
W+E +MR+
Sbjct: 358 WQEGLRYFDMMRQ 370
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 166/368 (45%), Gaps = 39/368 (10%)
Query: 83 FSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREA 142
F ++D C K + A LF+++ P++ YN++I A+ H + +R++K+
Sbjct: 43 FMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRK 102
Query: 143 GLCL-DGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSE 199
L D FT + K+C L Q+H G + NA++ Y L +
Sbjct: 103 SFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVD 162
Query: 200 AWRVFHEMGEGCRDEISWNAMIVA---CGQCREGK------------------------- 231
A +VF EM E RD ISWN+++ GQ ++ K
Sbjct: 163 AHKVFDEMYE--RDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIG 220
Query: 232 ---EALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGS 288
EA+ F EM G++ D ++ SVL + L L G H + GF V +
Sbjct: 221 CYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCN 280
Query: 289 GLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAG 348
LI+MYSKC + +++F ++ D++ W+TMISG++ H + + A+ F +MQRA
Sbjct: 281 ALIEMYSKCGV--ISQAIQLFGQMEGKDVISWSTMISGYAYHGN-AHGAIETFNEMQRAK 337
Query: 349 FRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDA 408
+P+ +F + SACS++ G + + + ++ L+ + ++ G L A
Sbjct: 338 VKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERA 397
Query: 409 RRVFDTMP 416
+ TMP
Sbjct: 398 VEITKTMP 405
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 147/315 (46%), Gaps = 14/315 (4%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF + K C S GK +H K N +Y K L +A F
Sbjct: 111 TFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEM 170
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+V S+N+++ + + A+ LF + IVS+ +I+ + G + A+ F+
Sbjct: 171 YERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFR 230
Query: 138 EAREAGLCLDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
E + AG+ D +L V+ +C + + L +H +A G+ VCNA++ Y G
Sbjct: 231 EMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCG 290
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
++S+A ++F +M EG +D ISW+ MI A+ F EM R +K + T +
Sbjct: 291 VISQAIQLFGQM-EG-KDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGL 348
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNP---HVGSGLIDMYSKCAPRGMLD-CMKVFEE 311
L+A + + G+++ M++ + P H G LID+ ++ G L+ +++ +
Sbjct: 349 LSACSHVGMWQEGLRYFD-MMRQDYQIEPKIEHYGC-LIDVLARA---GKLERAVEITKT 403
Query: 312 IS-EPDLVLWNTMIS 325
+ +PD +W +++S
Sbjct: 404 MPMKPDSKIWGSLLS 418
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 188/620 (30%), Positives = 293/620 (47%), Gaps = 84/620 (13%)
Query: 22 LLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPN 81
++KQC + + + +S A IKT + L N F + LD A ++ PN
Sbjct: 779 IIKQCSTPKLL---ESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPN 835
Query: 82 VFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEARE 141
VF YNA+ V SH + EL+ VR+ +++
Sbjct: 836 VFVYNALFKGFVTCSHPIRSLELY---------------------------VRMLRDS-- 866
Query: 142 AGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSE 199
+ +T S ++KA G +Q H + G+ + + ++ Y G + E
Sbjct: 867 --VSPSSYTYSSLVKASSFASRFGESLQAHIWKF--GFGFHVKIQTTLIDFYSATGRIRE 922
Query: 200 AWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAF 259
A +VF EM E RD+I+W M+ A + + A L +M
Sbjct: 923 ARKVFDEMPE--RDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATS----------- 969
Query: 260 TCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVL 319
CL N ++G G ++ +F ++ D++
Sbjct: 970 NCL-------------------INGYMGLGNLE-----------QAESLFNQMPVKDIIS 999
Query: 320 WNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALA 379
W TMI G+SQ++ E A+ F M G PD+ + S V SAC++L +GK+VH
Sbjct: 1000 WTTMIKGYSQNKRYRE-AIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYT 1058
Query: 380 IKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGES 439
+++ + V + +ALV MYSKCG+L A VF +P+ N NS+I G A HG E+
Sbjct: 1059 LQNGFVLD-VYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEA 1117
Query: 440 LQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVD 499
L++F M E + PN +TF+SV +AC H G V+EG++ + M + + I +H+ MV
Sbjct: 1118 LKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVH 1177
Query: 500 LLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVP 559
L +AG + EA +I M F+P ++ W ALL CR H N+ +A A NK + LEP N+
Sbjct: 1178 LFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGY 1237
Query: 560 YVMLSNMYASAGRWEESATVKRLMRERGVKKK-PGCSWIQIDNKVHVFVAEDSSHPMIKE 618
Y +L +MYA RW + A ++ MRE G++K PG S I+ID + H+F A D SH E
Sbjct: 1238 YFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDE 1297
Query: 619 IHEYMGEMLRKMKQAGYVPD 638
+ + E+ +M AGYV +
Sbjct: 1298 VCLLLDEIYDQMGLAGYVQE 1317
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 270 bits (689), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 169/489 (34%), Positives = 272/489 (55%), Gaps = 14/489 (2%)
Query: 115 SYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLV--MQLHCFA 172
SYNTL++++A + + +K G D FT V KAC + G+ Q+H
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 173 VLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKE 232
G+ V N+++ YG G A +VF EM RD +SW +I + KE
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMP--VRDVVSWTGIITGFTRTGLYKE 190
Query: 233 ALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLID 292
AL F +M ++ ++ T VL + + L+ G HG ++K + G+ LID
Sbjct: 191 ALDTFS---KMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALID 247
Query: 293 MYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQ-RAGFRP 351
MY KC + D M+VF E+ + D V WN+MISG H + S++A+ F MQ +G +P
Sbjct: 248 MYVKCEQ--LSDAMRVFGELEKKDKVSWNSMISGLV-HCERSKEAIDLFSLMQTSSGIKP 304
Query: 352 DDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRV 411
D + V SAC++L + G+ VH + + I + + A+V MY+KCG + A +
Sbjct: 305 DGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWD-THIGTAIVDMYAKCGYIETALEI 363
Query: 412 FDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKV 471
F+ + N + N+++ G A HG ESL+ FE M++ PN +TF++ L+AC HTG V
Sbjct: 364 FNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLV 423
Query: 472 EEGQKYFNMMKEK-FGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALL 530
+EG++YF+ MK + + + P+ +H+ CM+DLL RAG L+EA +++ MP P A+L
Sbjct: 424 DEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAIL 483
Query: 531 GACRKHGNV-ELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVK 589
AC+ G + EL + + FL +E ++ YV+LSN++A+ RW++ A ++RLM+ +G+
Sbjct: 484 SACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGIS 543
Query: 590 KKPGCSWIQ 598
K PG S+I+
Sbjct: 544 KVPGSSYIE 552
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 14/226 (6%)
Query: 86 NAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR-EAGL 144
NA+ID VK L A +F E+ + D VS+N++I+ H A+ LF + +G+
Sbjct: 243 NALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGI 302
Query: 145 CLDGFTLSGVIKACREDVGLVMQ---LHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAW 201
DG L+ V+ AC +G V +H + + G + A++ Y G + A
Sbjct: 303 KPDGHILTSVLSAC-ASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETAL 361
Query: 202 RVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTC 261
+F+ G ++ +WNA++ G E+L F EMV++G K ++ T + L A
Sbjct: 362 EIFN--GIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCH 419
Query: 262 LEDLAGGMQFHGRMIKSGFNWNP---HVGSGLIDMYSKCAPRGMLD 304
+ G ++ +M +N P H G +ID+ + G+LD
Sbjct: 420 TGLVDEGRRYFHKMKSREYNLFPKLEHYGC-MIDLLCRA---GLLD 461
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 58/126 (46%), Gaps = 4/126 (3%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTN 78
T++L C S + G+ +H + I T++ +Y+KCG ++ A F
Sbjct: 309 LTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIR 368
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIP----RPDIVSYNTLIAAHAHRGEHGPAVR 134
+ NVF++NA++ H H + F+E+ +P++V++ + A H G R
Sbjct: 369 SKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRR 428
Query: 135 LFKEAR 140
F + +
Sbjct: 429 YFHKMK 434
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 164/537 (30%), Positives = 277/537 (51%), Gaps = 40/537 (7%)
Query: 98 LHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKA 157
+ A +FD + D+V++N +I+ + +G A+ + + R L D TL+ ++ A
Sbjct: 325 IEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSA 384
Query: 158 C--REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEI 215
E++ L ++ C+ + + + + V+ Y G + +A +VF E +D I
Sbjct: 385 AARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVE--KDLI 442
Query: 216 SWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRM 275
WN ++ A + EAL LF M G+ ++ T ++ + L G +
Sbjct: 443 LWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSL-----LRNGQVDEAK- 496
Query: 276 IKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSE 335
DM+ + G++ P+L+ W TM++G Q+ SE
Sbjct: 497 ----------------DMFLQMQSSGII-----------PNLISWTTMMNGMVQN-GCSE 528
Query: 336 DALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNAL 395
+A++ + MQ +G RP+ S + SAC++L+S +G+ +H I++ S+ VS+ +L
Sbjct: 529 EAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSL 588
Query: 396 VAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNN 455
V MY+KCG+++ A +VF + N+MI+ YA +G E++ L+ + + P+N
Sbjct: 589 VDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDN 648
Query: 456 ITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIE 515
IT +VLSAC H G + + + F + K ++P +H+ MVDLL AG+ E+A R+IE
Sbjct: 649 ITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIE 708
Query: 516 TMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEE 575
MPF P + +L+ +C K EL + K L+ EP N+ YV +SN YA G W+E
Sbjct: 709 EMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDE 768
Query: 576 SATVKRLMRERGVKKKPGCSWIQI--DNKVHVFVAEDSSHPMIKEIHEYMGEMLRKM 630
++ +M+ +G+KKKPGCSWIQI + VHVFVA D +H I EI + +L M
Sbjct: 769 VVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDM 825
Score = 195 bits (496), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 153/575 (26%), Positives = 274/575 (47%), Gaps = 57/575 (9%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKT--FIPHSTYLSNHFTLLYSKCGTLDNARTSFRL 76
+ +L+ C+ +RD+STGK +HA +K F + Y+ + Y+KC L+ A F
Sbjct: 73 YGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSK 132
Query: 77 TNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLF 136
NVFS+ A +I G A+ F
Sbjct: 133 LRVRNVFSWAA-------------------------------IIGVKCRIGLCEGALMGF 161
Query: 137 KEAREAGLCLDGFTLSGVIKAC------REDVGLVMQLHCFAVLCGYSCYASVCNAVLAR 190
E E + D F + V KAC R G+ H + V G V +++
Sbjct: 162 VEMLENEIFPDNFVVPNVCKACGALKWSRFGRGV----HGYVVKSGLEDCVFVASSLADM 217
Query: 191 YGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMF 250
YG G+L +A +VF E+ + R+ ++WNA++V Q + +EA+ LF +M + G++
Sbjct: 218 YGKCGVLDDASKVFDEIPD--RNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRV 275
Query: 251 TMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMK-VF 309
T+++ L+A + + G Q H I +G + +G+ L++ Y K G+++ + VF
Sbjct: 276 TVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKV---GLIEYAEMVF 332
Query: 310 EEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSP 369
+ + E D+V WN +ISG+ Q + L EDA+ Q M+ + D + + + SA + +
Sbjct: 333 DRMFEKDVVTWNLIISGYVQ-QGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENL 391
Query: 370 SLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITG 429
LGK+V I+ S+ V + + ++ MY+KCG++ DA++VFD+ E + + N+++
Sbjct: 392 KLGKEVQCYCIRHSFESDIV-LASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAA 450
Query: 430 YAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEP 489
YA+ G+ GE+L+LF M E + PN IT+ ++ + G+V+E + F M+ GI P
Sbjct: 451 YAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIP 509
Query: 490 EAKHFSCMVDLLGRAGKLEEAERIIETMP---FDPGSIEWAALLGACRKHGNVELAVKAA 546
++ M++ + + G EEA + M P + L AC ++ +
Sbjct: 510 NLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIH 569
Query: 547 NKFLQLEPHNAVPYV--MLSNMYASAGRWEESATV 579
++ H+++ + L +MYA G ++ V
Sbjct: 570 GYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKV 604
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 126/552 (22%), Positives = 239/552 (43%), Gaps = 81/552 (14%)
Query: 21 NLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNP 80
N+ K C + + G+ +H +K+ + ++++ +Y KCG LD+
Sbjct: 178 NVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDD----------- 226
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
A ++FDEIP + V++N L+ + G++ A+RLF + R
Sbjct: 227 --------------------ASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMR 266
Query: 141 EAGLCLDGFTLSGVIKACREDVGLV--MQLHCFAVLCGYSCYASVCNAVLARYGGRGLLS 198
+ G+ T+S + A G+ Q H A++ G + ++L Y GL+
Sbjct: 267 KQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIE 326
Query: 199 EAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTA 258
A VF M E +D ++WN +I Q ++A+ + M +K D T+A++++A
Sbjct: 327 YAEMVFDRMFE--KDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSA 384
Query: 259 FTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLV 318
E+L G + I+ F + + S ++DMY+KC ++D KVF+ E DL+
Sbjct: 385 AARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCG--SIVDAKKVFDSTVEKDLI 442
Query: 319 LWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHAL 378
LWNT+++ +++ LS +AL F MQ G
Sbjct: 443 LWNTLLAAYAE-SGLSGEALRLFYGMQLEG------------------------------ 471
Query: 379 AIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH----NTVSLNSMITGYAQHG 434
+P N ++ N ++++ + G + +A+ +F M N +S +M+ G Q+G
Sbjct: 472 -----VPPNVITWNLIILSLL-RNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNG 525
Query: 435 VEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHF 494
E++ M + + PN + LSACAH + G+ +
Sbjct: 526 CSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIE 585
Query: 495 SCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKF--LQL 552
+ +VD+ + G + +AE++ + + + A++ A +GN++ A+ + L
Sbjct: 586 TSLVDMYAKCGDINKAEKVFGSKLYSELPLS-NAMISAYALYGNLKEAIALYRSLEGVGL 644
Query: 553 EPHNAVPYVMLS 564
+P N +LS
Sbjct: 645 KPDNITITNVLS 656
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 178/354 (50%), Gaps = 16/354 (4%)
Query: 227 CREG--KEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSG--FNW 282
C+ G KEAL L EM ++I +L DL+ G Q H R++K+G +
Sbjct: 46 CKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYAR 105
Query: 283 NPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQ 342
N ++ + L+ Y+KC + + + F ++ ++ W +I G L E AL+ F
Sbjct: 106 NEYIETKLVIFYAKCDALEIAEVL--FSKLRVRNVFSWAAII-GVKCRIGLCEGALMGFV 162
Query: 343 DMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKC 402
+M PD+ V AC L G+ VH +KS + + V V ++L MY KC
Sbjct: 163 EMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGL-EDCVFVASSLADMYGKC 221
Query: 403 GNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVL 462
G L DA +VFD +P+ N V+ N+++ GY Q+G E+++LF M ++ + P +T + L
Sbjct: 222 GVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCL 281
Query: 463 SACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPG 522
SA A+ G VEEG++ + G+E + + +++ + G +E AE + + M F+
Sbjct: 282 SASANMGGVEEGKQSHAIAIVN-GMELDNILGTSLLNFYCKVGLIEYAEMVFDRM-FEKD 339
Query: 523 SIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPY--VMLSNMYASAGRWE 574
+ W ++ + G VE A+ + ++LE + Y V L+ + ++A R E
Sbjct: 340 VVTWNLIISGYVQQGLVEDAIYMC-QLMRLEK---LKYDCVTLATLMSAAARTE 389
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 121/288 (42%), Gaps = 54/288 (18%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T L+ ++ GK + I+ L++ +Y+KCG++ +A+ F T
Sbjct: 377 TLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDST 436
Query: 78 NN-----------------------------------PNVFSYNAIIDACVKHSHLHLAR 102
PNV ++N II + +++ + A+
Sbjct: 437 VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAK 496
Query: 103 ELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKAC 158
++F ++ P+++S+ T++ G A+ ++ +E+GL + F+++ + AC
Sbjct: 497 DMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Query: 159 REDVGLVMQLHCFAVLCGY-------SCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGC 211
+ LH + GY S S+ +++ Y G +++A +VF G
Sbjct: 557 AH----LASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVF---GSKL 609
Query: 212 RDEISW-NAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTA 258
E+ NAMI A KEA+ L+ + +G+K D T+ +VL+A
Sbjct: 610 YSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSA 657
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 169/538 (31%), Positives = 292/538 (54%), Gaps = 16/538 (2%)
Query: 101 ARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE-AREAGLCLDGFTLSGVIKACR 159
AR+LFDE+ D++S++ +I ++ E ++LFKE EA D T++ V+KAC
Sbjct: 178 ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
Query: 160 --EDVGLVMQLHCFAVLCGYSCY-ASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEIS 216
ED+ + +H F++ G+ VCN+++ Y + A+RVF E CR+ +S
Sbjct: 238 VMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETT--CRNIVS 295
Query: 217 WNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMI 276
WN+++ + EAL +F MV+ +++D T+ S+L E HG +I
Sbjct: 296 WNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVII 355
Query: 277 KSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSED 336
+ G+ N S LID Y+ C+ + D V + ++ D+V +TMISG + H S++
Sbjct: 356 RRGYESNEVALSSLIDAYTSCSL--VDDAGTVLDSMTYKDVVSCSTMISGLA-HAGRSDE 412
Query: 337 ALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALV 396
A+ F M+ P+ + + +ACS + K H +AI+ + N +SV ++V
Sbjct: 413 AISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIV 469
Query: 397 AMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNI 456
Y+KCG + ARR FD + E N +S +I+ YA +G+ ++L LF+ M Q+ PN +
Sbjct: 470 DAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAV 529
Query: 457 TFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIET 516
T+++ LSAC H G V++G F M E+ +P +H+SC+VD+L RAG+++ A +I+
Sbjct: 530 TYLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIKN 588
Query: 517 MPFD--PGSIEWAALLGACR-KHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRW 573
+P D G+ W A+L CR + + + + + L+LEP + Y++ S+ +A+ W
Sbjct: 589 LPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSW 648
Query: 574 EESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMK 631
E+ A ++RL++ER V+ G S ++ N F+A D E+++ + + R MK
Sbjct: 649 EDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSLHRCMK 706
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 141/486 (29%), Positives = 230/486 (47%), Gaps = 20/486 (4%)
Query: 82 VFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEARE 141
+F N+I D +K L FD + D VS+N ++ G + F + R
Sbjct: 61 LFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV 120
Query: 142 AGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAW 201
G + TL VI ACR ++H + + G+ +SV N++L Y LS A
Sbjct: 121 WGFEPNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-AR 179
Query: 202 RVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMV-RMGMKIDMFTMASVLTAFT 260
++F EM E RD ISW+ +I + Q +E L LF EMV + D T+ SVL A T
Sbjct: 180 KLFDEMSE--RDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
Query: 261 CLEDLAGGMQFHGRMIKSGFNW-NPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVL 319
+ED+ G HG I+ GF+ + V + LIDMYSK + +VF+E + ++V
Sbjct: 238 VMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSK--GFDVDSAFRVFDETTCRNIVS 295
Query: 320 WNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALA 379
WN++++GF H ++AL F M + D+ + + C P K +H +
Sbjct: 296 WNSILAGF-VHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVI 354
Query: 380 IKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGES 439
I+ SN V++ ++L+ Y+ C + DA V D+M + VS ++MI+G A G E+
Sbjct: 355 IRRGYESNEVAL-SSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEA 413
Query: 440 LQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVD 499
+ +F M PN IT IS+L+AC+ + + + + + + + +VD
Sbjct: 414 ISIFCHMRD---TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVD 470
Query: 500 LLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPH---- 555
+ G +E A R + + + I W ++ A +G L KA F +++
Sbjct: 471 AYAKCGAIEMARRTFDQIT-EKNIISWTVIISAYAING---LPDKALALFDEMKQKGYTP 526
Query: 556 NAVPYV 561
NAV Y+
Sbjct: 527 NAVTYL 532
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 174/404 (43%), Gaps = 44/404 (10%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T T++LK C DI G+S+H I R F L
Sbjct: 228 TVTSVLKACTVMEDIDVGRSVHGFSI---------------------------RRGFDLA 260
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+ VF N++ID K + A +FDE +IVS+N+++A H + A+ +F
Sbjct: 261 D---VFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFH 317
Query: 138 EAREAGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
+ + +D T+ +++ C+ E +H + GY ++++ Y
Sbjct: 318 LMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCS 377
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
L+ +A V M +D +S + MI EA+ +F M I T+ S+
Sbjct: 378 LVDDAGTVLDSMTY--KDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAI---TVISL 432
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNP-HVGSGLIDMYSKCAPRGMLDCMKVFEEISE 314
L A + DL HG I+ N VG+ ++D Y+KC M + F++I+E
Sbjct: 433 LNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEM--ARRTFDQITE 490
Query: 315 PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQ 374
+++ W +IS ++ + L + AL F +M++ G+ P+ ++ SAC++ G
Sbjct: 491 KNIISWTVIISAYAIN-GLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLM 549
Query: 375 VHALAIKSD-IPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPE 417
+ ++ D PS + + +V M S+ G + A + +PE
Sbjct: 550 IFKSMVEEDHKPS--LQHYSCIVDMLSRAGEIDTAVELIKNLPE 591
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 178/604 (29%), Positives = 305/604 (50%), Gaps = 56/604 (9%)
Query: 34 TGKSLHALYIKTFIPHSTYLS-NHFTLLYSKCGTLDNARTSF-RLTNNPNVFSYNAIIDA 91
GK A + +P ++ H Y K G + AR F R+ + NV ++ A++
Sbjct: 59 VGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSG 118
Query: 92 CVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTL 151
++ L +A LF E+P ++VS+NT+I +A G A+ LF E E + +
Sbjct: 119 YLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV----SW 174
Query: 152 SGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGC 211
+ ++KA + + ++ F + + A++ G + EA R+F M E
Sbjct: 175 NSMVKALVQRGRIDEAMNLFERMPRRDVVS--WTAMVDGLAKNGKVDEARRLFDCMPE-- 230
Query: 212 RDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQF 271
R+ ISWNAMI Q EA LF M D A
Sbjct: 231 RNIISWNAMITGYAQNNRIDEADQLFQVMPE--------------------RDFA----- 265
Query: 272 HGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHE 331
+WN + +G I R M +F+ + E +++ W TMI+G+ +++
Sbjct: 266 ---------SWNTMI-TGFI------RNREMNKACGLFDRMPEKNVISWTTMITGYVENK 309
Query: 332 DLSEDALICFQDMQRAG-FRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVS 390
+ +E+AL F M R G +P+ ++ + SACS+L+ G+Q+H L KS N +
Sbjct: 310 E-NEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEI- 367
Query: 391 VNNALVAMYSKCGNLHDARRVFDT--MPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQ 448
V +AL+ MYSK G L AR++FD + + + +S NSMI YA HG E+++++ M +
Sbjct: 368 VTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRK 427
Query: 449 EDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLE 508
P+ +T++++L AC+H G VE+G ++F + + +H++C+VDL GRAG+L+
Sbjct: 428 HGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLK 487
Query: 509 EAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYA 568
+ I + A+L AC H V +A + K L+ +A YV++SN+YA
Sbjct: 488 DVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYA 547
Query: 569 SAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLR 628
+ G+ EE+A ++ M+E+G+KK+PGCSW+++ + H+FV D SHP + + + ++
Sbjct: 548 ANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRN 607
Query: 629 KMKQ 632
KM++
Sbjct: 608 KMRK 611
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 138/299 (46%), Gaps = 23/299 (7%)
Query: 297 CAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSF 356
C + + K+F+ + E D+V W +I+G+ + D+ E + R R + ++
Sbjct: 57 CKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMRE----ARELFDRVDSRKNVVTW 112
Query: 357 SCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP 416
+ + S S+ + + ++P V N ++ Y++ G + A +FD MP
Sbjct: 113 TAMVSGYLRSKQLSIAEMLF-----QEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMP 167
Query: 417 EHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQK 476
E N VS NSM+ Q G E++ LFE M + D+V ++ +++ A GKV+E ++
Sbjct: 168 ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVV----SWTAMVDGLAKNGKVDEARR 223
Query: 477 YFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKH 536
F+ M E+ I ++ M+ + +++EA+++ + MP + W ++ ++
Sbjct: 224 LFDCMPERNIIS-----WNAMITGYAQNNRIDEADQLFQVMP-ERDFASWNTMITGFIRN 277
Query: 537 GNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATV-KRLMRERGVKKKPGC 594
+ KA F ++ N + + + Y EE+ V +++R+ VK G
Sbjct: 278 REMN---KACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGT 333
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 113/232 (48%), Gaps = 14/232 (6%)
Query: 357 SCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP 416
S V + N S L V ++ S P RV L+ K G + +AR++FD +P
Sbjct: 16 SSVFPSSDNDRSVQLFNLVRSIYSSSSRP--RVPQPEWLIGELCKVGKIAEARKLFDGLP 73
Query: 417 EHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQK 476
E + V+ +ITGY + G E+ +LF+ + D N +T+ +++S + ++ +
Sbjct: 74 ERDVVTWTHVITGYIKLGDMREARELFDRV---DSRKNVVTWTAMVSGYLRSKQLSIAEM 130
Query: 477 YFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKH 536
F M E+ + ++ M+D ++G++++A + + MP + + W +++ A +
Sbjct: 131 LFQEMPERNVVS-----WNTMIDGYAQSGRIDKALELFDEMP-ERNIVSWNSMVKALVQR 184
Query: 537 GNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGV 588
G ++ +A N F ++ + V + + + A G+ +E+ + M ER +
Sbjct: 185 GRID---EAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI 233
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 266 bits (679), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 165/520 (31%), Positives = 272/520 (52%), Gaps = 68/520 (13%)
Query: 160 EDVGLVMQLHCFAVLCGYSCYASVCNAVL--ARYGGRGLLSEAWRVFHEMGEGCRDEISW 217
+++ + Q+H V+ G SV ++ A G L A ++F E+ + D
Sbjct: 23 KNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKP--DVSIC 80
Query: 218 NAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIK 277
N ++ Q + ++ + L+ EM + G+ D +T VL A + LE + G FHG++++
Sbjct: 81 NHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVR 140
Query: 278 SGFNWNPHVGSGLIDMYSKC----------------------------APRGMLD-CMKV 308
GF N +V + LI ++ C A RG +D M++
Sbjct: 141 HGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRL 200
Query: 309 FEEISEPDLVLWNTMISG----------------FSQHEDLSEDALIC------------ 340
F+E+ D V WN MI+G F++ + ++ +A+I
Sbjct: 201 FDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEAL 260
Query: 341 --FQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVN----NA 394
F++M+ AG PD + + SAC+ L GK++H +++ S+ + V NA
Sbjct: 261 GIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNA 320
Query: 395 LVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPN 454
L+ MY+KCG++ A VF + + + + N++I G A H EG S+++FE M + + PN
Sbjct: 321 LIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEG-SIEMFEEMQRLKVWPN 379
Query: 455 NITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERII 514
+TFI V+ AC+H+G+V+EG+KYF++M++ + IEP KH+ CMVD+LGRAG+LEEA +
Sbjct: 380 EVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFV 439
Query: 515 ETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWE 574
E+M +P +I W LLGAC+ +GNVEL A K L + + YV+LSN+YAS G+W+
Sbjct: 440 ESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWD 499
Query: 575 ESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHP 614
V+++ + VKK G S I+ D+ + SS P
Sbjct: 500 GVQKVRKMFDDTRVKKPTGVSLIEEDDDKLMMRYLLSSEP 539
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/479 (25%), Positives = 203/479 (42%), Gaps = 120/479 (25%)
Query: 82 VFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEARE 141
++S + + +K++H +LFDEIP+PD+ N ++ A + V L+ E +
Sbjct: 51 IYSASLSVPGALKYAH-----KLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEK 105
Query: 142 AGLCLDGFTLSGVIKACRE---------------DVGLVMQ------LHCFAVLCGYSCY 180
G+ D +T + V+KAC + G V+ L F CG
Sbjct: 106 RGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGI 165
Query: 181 AS------------VCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCR 228
AS +++ + Y RG + EA R+F EM +D+++WN MI C +C+
Sbjct: 166 ASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM--PYKDQVAWNVMITGCLKCK 223
Query: 229 E-------------------------------GKEALVLFGEMVRMGMKIDMFTMASVLT 257
E KEAL +F EM G D+ T+ S+L+
Sbjct: 224 EMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLS 283
Query: 258 AFTCLEDLAGGMQFHGRMIKSG-FNWNPHVGS----GLIDMYSKCAPRGMLD-CMKVFEE 311
A L DL G + H ++++ + + +VG+ LIDMY+KC G +D ++VF
Sbjct: 284 ACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKC---GSIDRAIEVFRG 340
Query: 312 ISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSL 371
+ + DL WNT+I G + H +E ++ F++MQR P++ +F V ACS+
Sbjct: 341 VKDRDLSTWNTLIVGLALHH--AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDE 398
Query: 372 GKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYA 431
G++ +L R +++ P N M+
Sbjct: 399 GRKYFSL-----------------------------MRDMYNIEP--NIKHYGCMVDMLG 427
Query: 432 QHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEG----QKYFNMMKEKFG 486
+ G E+ E M I PN I + ++L AC G VE G +K +M K++ G
Sbjct: 428 RAGQLEEAFMFVESM---KIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESG 483
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 147/349 (42%), Gaps = 49/349 (14%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTL---------- 67
TFT +LK C S G + H ++ + Y+ N L ++ CG L
Sbjct: 114 TFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDS 173
Query: 68 ---------------------DNARTSFRLTNNPNVFSYNAIIDACVKHSHLHLARELFD 106
D A F + ++N +I C+K + ARELFD
Sbjct: 174 AKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFD 233
Query: 107 EIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACR--EDVGL 164
D+V++N +I+ + + G A+ +FKE R+AG D T+ ++ AC D+
Sbjct: 234 RFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLET 293
Query: 165 VMQLHCF-----AVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNA 219
+LH + +V + NA++ Y G + A VF G RD +WN
Sbjct: 294 GKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFR--GVKDRDLSTWNT 351
Query: 220 MIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSG 279
+IV + ++ +F EM R+ + + T V+ A + + G ++ +++
Sbjct: 352 LIVGLA-LHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFS-LMRDM 409
Query: 280 FNWNPHVG--SGLIDMYSKCAPRGMLDCMKVFEEIS--EPDLVLWNTMI 324
+N P++ ++DM + G L+ +F E EP+ ++W T++
Sbjct: 410 YNIEPNIKHYGCMVDMLGRA---GQLEEAFMFVESMKIEPNAIVWRTLL 455
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 265 bits (678), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 173/583 (29%), Positives = 295/583 (50%), Gaps = 70/583 (12%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
++ L++ R G+ LHA + + I T ++ Y +CG
Sbjct: 18 SYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGK----------- 66
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
++DA R++FDE+P+ DI +I A A G + ++ F+
Sbjct: 67 ----------VLDA----------RKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFR 106
Query: 138 EAREAGLCLDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
E + GL LD F + ++KA R D +HC + Y A + ++++ Y G
Sbjct: 107 EMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFG 166
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
+ A +VF ++GE +D + +NAMI + EAL L +M +G+K D+ T ++
Sbjct: 167 EVGNARKVFSDLGE--QDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNAL 224
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEP 315
++ F+ H R N S +++ L C+ + +P
Sbjct: 225 ISGFS-----------HMR--------NEEKVSEILE----------LMCLDGY----KP 251
Query: 316 DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQV 375
D+V W ++ISG H +E A F+ M G P+ + + AC+ L+ GK++
Sbjct: 252 DVVSWTSIISGLV-HNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEI 310
Query: 376 HALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGV 435
H ++ + + + V +AL+ MY KCG + +A +F P+ TV+ NSMI YA HG+
Sbjct: 311 HGYSVVTGLEDHGF-VRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGL 369
Query: 436 EGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFS 495
++++LF+ M +++TF ++L+AC+H G + GQ F +M+ K+ I P +H++
Sbjct: 370 ADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYA 429
Query: 496 CMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPH 555
CMVDLLGRAGKL EA +I+ M +P W ALL ACR HGN+ELA AA +LEP
Sbjct: 430 CMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPE 489
Query: 556 NAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQ 598
N+ ++L+++YA+AG WE +K++++++ ++ G SW++
Sbjct: 490 NSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVE 532
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 265 bits (678), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 183/588 (31%), Positives = 285/588 (48%), Gaps = 50/588 (8%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTN 78
F +L C + GK +H+L IK ++ + N +Y C
Sbjct: 193 FATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNC-------------- 237
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDE--IPRPDIVSYNTLIAAHAHRGEHGPAVRLF 136
++DAC+ +F+E + D V++N +I A + ++ +F
Sbjct: 238 -------QVVVDACL----------VFEETDVAVRDQVTFNVVIDGLAGF-KRDESLLVF 279
Query: 137 KEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGL 196
++ EA L T V+ +C + Q+H A+ GY Y V NA + Y
Sbjct: 280 RKMLEASLRPTDLTFVSVMGSC-SCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFED 338
Query: 197 LSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVL 256
A +VF + E +D ++WN MI + Q + GK A+ ++ M +G+K D FT S+L
Sbjct: 339 FGAAHKVFESLEE--KDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL 396
Query: 257 TAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPD 316
L+ L +IK G + + + LI YSK D + FE +
Sbjct: 397 ATSLDLDVLE---MVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLL--FERSLRKN 451
Query: 317 LVLWNTMISGFSQHEDLSEDALICFQDMQRAGFR--PDDCSFSCVTSACSNLSSPSLGKQ 374
L+ WN +ISGF H + L F + + R PD + S + S C + SS LG Q
Sbjct: 452 LISWNAIISGF-YHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQ 510
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHG 434
HA ++ + NAL+ MYS+CG + ++ VF+ M E + VS NS+I+ Y++HG
Sbjct: 511 THAYVLRHG-QFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHG 569
Query: 435 VEGESLQLFELMMQE-DIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKH 493
++ ++ M E ++P+ TF +VLSAC+H G VEEG + FN M E G+ H
Sbjct: 570 EGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDH 629
Query: 494 FSCMVDLLGRAGKLEEAERIIETMPFDPGS--IEWAALLGACRKHGNVELAVKAANKFLQ 551
FSC+VDLLGRAG L+EAE +++ GS W AL AC HG+++L A ++
Sbjct: 630 FSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLME 689
Query: 552 LEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQI 599
E + YV LSN+YA AG W+E+ +R + G K+ GCSW+++
Sbjct: 690 KEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 206 bits (525), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 156/614 (25%), Positives = 289/614 (47%), Gaps = 66/614 (10%)
Query: 30 RDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAII 89
RD G +H I++ + +++SN LY + G L + + F + P+V+S+ ++
Sbjct: 71 RDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLL 130
Query: 90 DACVKHSHLHLARELFDEIP-RPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDG 148
A K + A E+FD++P R D+ +N +I G H +V LF+E + G+ D
Sbjct: 131 SASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDK 190
Query: 149 FTLSGVIKACREDVGLV---MQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFH 205
F + ++ C D G + Q+H + G+ +SV NA++ Y ++ +A VF
Sbjct: 191 FGFATILSMC--DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFE 248
Query: 206 EMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDL 265
E RD++++N +I + E+L++F +M+ ++ T SV+ + +C
Sbjct: 249 ETDVAVRDQVTFNVVIDGLAGFKR-DESLLVFRKMLEASLRPTDLTFVSVMGSCSC---A 304
Query: 266 AGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMIS 325
A G Q HG IK+G+ V + + MYS G KVFE + E DLV WNTMIS
Sbjct: 305 AMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGA--AHKVFESLEEKDLVTWNTMIS 362
Query: 326 GFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIP 385
++Q + L + A+ ++ M G +PD+ +F + + +L + + V A IK +
Sbjct: 363 SYNQAK-LGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDL---DVLEMVQACIIKFGL- 417
Query: 386 SNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFEL 445
S+++ ++NAL++ YSK G + A +F+ N +S N++I+G+ +G E L+ F
Sbjct: 418 SSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSC 477
Query: 446 MMQED--IVPNNITFISVLSACAHT----------------------------------- 468
+++ + I+P+ T ++LS C T
Sbjct: 478 LLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQC 537
Query: 469 GKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFD----PGSI 524
G ++ + FN M EK + ++ ++ R G+ E A +TM + P +
Sbjct: 538 GTIQNSLEVFNQMSEK-----DVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAA 592
Query: 525 EWAALLGACRKHGNVELAVKAANKFLQLEP--HNAVPYVMLSNMYASAGRWEESATVKRL 582
++A+L AC G VE ++ N ++ N + L ++ AG +E+ ++ ++
Sbjct: 593 TFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKI 652
Query: 583 MRERGVKKKPGCSW 596
E+ + + W
Sbjct: 653 -SEKTIGSRVDVWW 665
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 139/296 (46%), Gaps = 43/296 (14%)
Query: 207 MGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVR-MGMKIDMFTMASVLTAFTCLEDL 265
+ E ++ N + + E + AL LF ++ R ++ D ++++ +T L D
Sbjct: 14 IAENSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDT 73
Query: 266 AGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMIS 325
G Q H I+SG + HV + L+ +Y + L K F+EI EPD+ W T++S
Sbjct: 74 IFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLK--KKFDEIDEPDVYSWTTLLS 131
Query: 326 G----------------FSQHEDLS---------------EDALICFQDMQRAGFRPDDC 354
+ +D++ E ++ F++M + G R D
Sbjct: 132 ASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKF 191
Query: 355 SFSCVTSACSNLSSPSLGKQVHALAIKSD--IPSNRVSVNNALVAMYSKCGNLHDARRVF 412
F+ + S C + S GKQVH+L IK+ I S SV NAL+ MY C + DA VF
Sbjct: 192 GFATILSMC-DYGSLDFGKQVHSLVIKAGFFIAS---SVVNALITMYFNCQVVVDACLVF 247
Query: 413 D--TMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACA 466
+ + + V+ N +I G A + ESL +F M++ + P ++TF+SV+ +C+
Sbjct: 248 EETDVAVRDQVTFNVVIDGLAGFKRD-ESLLVFRKMLEASLRPTDLTFVSVMGSCS 302
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T + LL C+S + G HA ++ T + N +YS+CGT+ N+ F
Sbjct: 491 TLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQM 550
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPR-----PDIVSYNTLIAAHAHRGEHGPA 132
+ +V S+N++I A +H A + + PD +++ +++A +H G
Sbjct: 551 SEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEG 610
Query: 133 VRLFKEARE 141
+ +F E
Sbjct: 611 LEIFNSMVE 619
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 264 bits (675), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 179/589 (30%), Positives = 296/589 (50%), Gaps = 46/589 (7%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T+ +LK C R I GK +H+ + Y+ Y+KCG L+
Sbjct: 105 TYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELE--------- 155
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+A ++FDE+P+ D+V++N +I+ + + LF
Sbjct: 156 ----------------------MAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFL 193
Query: 138 EAREA-GLCLDGFTLSGVIKACREDVGLV--MQLHCFAVLCGYSCYASVCNAVLARYGGR 194
+ R GL + T+ G+ A L +H + G+S V +L Y
Sbjct: 194 DMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKS 253
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
+ A RVF + ++E++W+AMI + KEA +F +M+ + + M T +
Sbjct: 254 KCIIYARRVFDL--DFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML-VNDNVAMVTPVA 310
Query: 255 V-LTAFTC--LEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEE 311
+ L C DL+GG H +K+GF + V + +I Y+K + D + F E
Sbjct: 311 IGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGS--LCDAFRQFSE 368
Query: 312 ISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSL 371
I D++ +N++I+G + E++ F +M+ +G RPD + V +ACS+L++
Sbjct: 369 IGLKDVISYNSLITGCVVNCR-PEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGH 427
Query: 372 GKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYA 431
G H + N S+ NAL+ MY+KCG L A+RVFDTM + + VS N+M+ G+
Sbjct: 428 GSSCHGYCVVHGYAVN-TSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFG 486
Query: 432 QHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFN-MMKEKFGIEPE 490
HG+ E+L LF M + + P+ +T +++LSAC+H+G V+EG++ FN M + F + P
Sbjct: 487 IHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPR 546
Query: 491 AKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFL 550
H++CM DLL RAG L+EA + MPF+P LL AC + N EL + + K +
Sbjct: 547 IDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKK-M 605
Query: 551 QLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQI 599
Q V+LSN Y++A RWE++A ++ + ++RG+ K PG SW+ +
Sbjct: 606 QSLGETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 142/532 (26%), Positives = 244/532 (45%), Gaps = 57/532 (10%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIK--TFIPHSTYLSNHFTLLYSKCGTLDNARTSFRL 76
F +LL+ CI R++ G+ +H +K + ST L N T LY+ C
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN-LTRLYASC------------ 48
Query: 77 TNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDI--VSYNTLIAAHAHRGEHGPAVR 134
+ + LAR +FDEIP P I ++++ +I A+A A+
Sbjct: 49 -------------------NEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALD 89
Query: 135 LFKEAREAGLCLDGFTLSGVIKACRE----DVGLVMQLHCFAVLCG-YSCYASVCNAVLA 189
L+ + +G+ +T V+KAC D G ++ H V C ++ VC A++
Sbjct: 90 LYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSH---VNCSDFATDMYVCTALVD 146
Query: 190 RYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRM-GMKID 248
Y G L A +VF EM + RD ++WNAMI + + LF +M R+ G+ +
Sbjct: 147 FYAKCGELEMAIKVFDEMPK--RDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPN 204
Query: 249 MFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKV 308
+ T+ + A L G HG + GF+ + V +G++D+Y+K + ++ +V
Sbjct: 205 LSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAK--SKCIIYARRV 262
Query: 309 FEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDM---QRAGFRPDDCSFSCVTSACSN 365
F+ + + V W+ MI G+ ++E + E + FQ + A P + + C+
Sbjct: 263 FDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP--VAIGLILMGCAR 320
Query: 366 LSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNS 425
S G+ VH A+K+ + ++V N +++ Y+K G+L DA R F + + +S NS
Sbjct: 321 FGDLSGGRCVHCYAVKAGFILD-LTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNS 379
Query: 426 MITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKF 485
+ITG + ES +LF M I P+ T + VL+AC+H + G
Sbjct: 380 LITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVH- 438
Query: 486 GIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHG 537
G + ++D+ + GKL+ A+R+ +TM + W +L HG
Sbjct: 439 GYAVNTSICNALMDMYTKCGKLDVAKRVFDTM-HKRDIVSWNTMLFGFGIHG 489
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/458 (33%), Positives = 251/458 (54%), Gaps = 35/458 (7%)
Query: 197 LSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMV--RMGMKIDMFTMAS 254
++ A+ VF + ++ WN +I + + A+ +F +M+ +K T S
Sbjct: 74 MNYAYLVFTRINH--KNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPS 131
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKC----------------- 297
V A+ L G Q HG +IK G + + + ++ MY C
Sbjct: 132 VFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFD 191
Query: 298 -----------APRGMLD-CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQ 345
A G++D +F+E+ + + V WN+MISGF ++ +DAL F++MQ
Sbjct: 192 VVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRF-KDALDMFREMQ 250
Query: 346 RAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNL 405
+PD + + +AC+ L + G+ +H +++ N + V AL+ MY KCG +
Sbjct: 251 EKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVT-ALIDMYCKCGCI 309
Query: 406 HDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSAC 465
+ VF+ P+ NSMI G A +G E ++ LF + + + P++++FI VL+AC
Sbjct: 310 EEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTAC 369
Query: 466 AHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIE 525
AH+G+V ++F +MKEK+ IEP KH++ MV++LG AG LEEAE +I+ MP + ++
Sbjct: 370 AHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVI 429
Query: 526 WAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRE 585
W++LL ACRK GNVE+A +AA +L+P YV+LSN YAS G +EE+ + LM+E
Sbjct: 430 WSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKE 489
Query: 586 RGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYM 623
R ++K+ GCS I++D +VH F++ +HP EI+ +
Sbjct: 490 RQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLL 527
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 164/352 (46%), Gaps = 41/352 (11%)
Query: 270 QFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQ 329
Q H +IK+G + S ++ + +P M VF I+ + +WNT+I GFS+
Sbjct: 43 QIHASLIKTGLISDTVTASRVL-AFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSR 101
Query: 330 HEDLSEDALICFQDM--QRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSN 387
E A+ F DM +P ++ V A L G+Q+H + IK + +
Sbjct: 102 -SSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDD 160
Query: 388 RVSVN------------------------------NALVAMYSKCGNLHDARRVFDTMPE 417
N N+++ ++KCG + A+ +FD MP+
Sbjct: 161 SFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQ 220
Query: 418 HNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKY 477
N VS NSMI+G+ ++G ++L +F M ++D+ P+ T +S+L+ACA+ G E+G+
Sbjct: 221 RNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWI 280
Query: 478 FN-MMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKH 536
+++ +F E + + ++D+ + G +EE + E P S W +++ +
Sbjct: 281 HEYIVRNRF--ELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSC-WNSMILGLANN 337
Query: 537 GNVELAVKAANKFLQ--LEPHNAVPYVMLSNMYASAGRWEESATVKRLMRER 586
G E A+ ++ + LEP ++V ++ + A +G + RLM+E+
Sbjct: 338 GFEERAMDLFSELERSGLEP-DSVSFIGVLTACAHSGEVHRADEFFRLMKEK 388
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 163/348 (46%), Gaps = 42/348 (12%)
Query: 35 GKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAIIDACVK 94
G+ LH + IK + +++ N +Y CG L A F +V ++N++I K
Sbjct: 145 GRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAK 204
Query: 95 HSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGV 154
+ A+ LFDE+P+ + VS+N++I+ G A+ +F+E +E + DGFT+ +
Sbjct: 205 CGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSL 264
Query: 155 IKACREDVGLVMQ---LHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGC 211
+ AC +G Q +H + V + + V A++ Y G + E VF C
Sbjct: 265 LNACAY-LGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFE-----C 318
Query: 212 --RDEIS-WNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGG 268
+ ++S WN+MI+ + A+ LF E+ R G++ D + VLTA ++
Sbjct: 319 APKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRA 378
Query: 269 MQFHGRMIKSGFNWNPHV-----------GSGLIDMYSKCAPRGMLDCMKVFEEISEPDL 317
+F R++K + P + G+GL++ ++ M V E D
Sbjct: 379 DEFF-RLMKEKYMIEPSIKHYTLMVNVLGGAGLLE-----EAEALIKNMPV-----EEDT 427
Query: 318 VLWNTMISGFSQ--HEDLSEDALICFQDMQRAGFRPDD-CSFSCVTSA 362
V+W++++S + + ++++ A C + + PD+ C + +++A
Sbjct: 428 VIWSSLLSACRKIGNVEMAKRAAKCLKKLD-----PDETCGYVLLSNA 470
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/449 (34%), Positives = 253/449 (56%), Gaps = 29/449 (6%)
Query: 195 GLLSEAWRVFHEMG-EGCR-DEISWNAMIVACGQCREGKEAL--VLFGEMVRMGMKIDMF 250
G L+EA + F +M G + I++ A++ CG G EAL +L G ++G+ +
Sbjct: 50 GRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHV 109
Query: 251 TMASVLTAFTCLEDLAGGMQFHGRMI------KSGFNWNPHVGSGLIDMYSKCAPRGMLD 304
+ + + G R++ K+ WN +ID Y + G +D
Sbjct: 110 MVGTAIIGMYSKR----GRFKKARLVFDYMEDKNSVTWNT-----MIDGYMRS---GQVD 157
Query: 305 -CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSAC 363
K+F+++ E DL+ W MI+GF + + E+AL+ F++MQ +G +PD + +AC
Sbjct: 158 NAAKMFDKMPERDLISWTAMINGFVK-KGYQEEALLWFREMQISGVKPDYVAIIAALNAC 216
Query: 364 SNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSL 423
+NL + S G VH + D +N V V+N+L+ +Y +CG + AR+VF M + VS
Sbjct: 217 TNLGALSFGLWVHRYVLSQDFKNN-VRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSW 275
Query: 424 NSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKE 483
NS+I G+A +G ESL F M ++ P+ +TF L+AC+H G VEEG +YF +MK
Sbjct: 276 NSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKC 335
Query: 484 KFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHG-NVELA 542
+ I P +H+ C+VDL RAG+LE+A +++++MP P + +LL AC HG N+ LA
Sbjct: 336 DYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLA 395
Query: 543 VKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNK 602
+ L + YV+LSNMYA+ G+WE ++ ++R M+ G+KK+PG S I+ID+
Sbjct: 396 ERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDC 455
Query: 603 VHVFVAEDSSH---PMIKEIHEYMGEMLR 628
+HVF+A D++H I+E+ E + LR
Sbjct: 456 MHVFMAGDNAHVETTYIREVLELISSDLR 484
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 135/277 (48%), Gaps = 12/277 (4%)
Query: 60 LYSKCGTLDNARTSFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTL 119
+YSK G AR F + N ++N +ID ++ + A ++FD++P D++S+ +
Sbjct: 118 MYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAM 177
Query: 120 IAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQL--HCFAVLCGY 177
I +G A+ F+E + +G+ D + + AC L L H + + +
Sbjct: 178 INGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDF 237
Query: 178 SCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLF 237
V N+++ Y G + A +VF+ M + R +SWN++IV E+LV F
Sbjct: 238 KNNVRVSNSLIDLYCRCGCVEFARQVFYNMEK--RTVVSWNSVIVGFAANGNAHESLVYF 295
Query: 238 GEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNP---HVGSGLIDMY 294
+M G K D T LTA + + + G+++ +++K + +P H G L+D+Y
Sbjct: 296 RKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYF-QIMKCDYRISPRIEHYGC-LVDLY 353
Query: 295 SKCAPRGMLDCMKVFEEIS-EPDLVLWNTMISGFSQH 330
S+ + D +K+ + + +P+ V+ ++++ S H
Sbjct: 354 SRAGR--LEDALKLVQSMPMKPNEVVIGSLLAACSNH 388
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 6/172 (3%)
Query: 420 TVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAH-TGKVEEGQKYF 478
TVS S I ++G E+ + F M + PN+ITFI++LS C T E
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 479 NMMKEKFGIEPEAKHF-SCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHG 537
+ K G++ + ++ + + G+ ++A + + M D S+ W ++ + G
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYME-DKNSVTWNTMIDGYMRSG 154
Query: 538 NVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVK 589
V+ AA F ++ + + + + N + G EE+ R M+ GVK
Sbjct: 155 QVD---NAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 180/581 (30%), Positives = 275/581 (47%), Gaps = 42/581 (7%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T NLL C +S G+S+H + K+ + + + N YSKC L +A FR
Sbjct: 153 TLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFR-- 210
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
E+ VS+NT+I A++ G A+ +FK
Sbjct: 211 -----------------------------EMKDKSTVSWNTMIGAYSQSGLQEEAITVFK 241
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLL 197
E + + T+ ++ A LHC V CG SV +++ Y G L
Sbjct: 242 NMFEKNVEISPVTIINLLSAHVSH----EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCL 297
Query: 198 SEAWRVFHEMGEGCRDEISWNAMIVAC-GQCREGKEALVLFGEMVRMGMKIDMFTMASVL 256
A R++ +D I IV+C + + A+V F + ++ MKID + +L
Sbjct: 298 VSAERLY---ASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGIL 354
Query: 257 TAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPD 316
+ GM HG IKSG V +GLI MYSK + + +FE++ E
Sbjct: 355 HGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETV--LFLFEQLQETP 412
Query: 317 LVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVH 376
L+ WN++ISG Q S + Q M G PD + + + + CS L +LGK++H
Sbjct: 413 LISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELH 472
Query: 377 ALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVE 436
++++ N V AL+ MY+KCGN A VF ++ T + NSMI+GY+ G++
Sbjct: 473 GYTLRNNFE-NENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQ 531
Query: 437 GESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSC 496
+L + M ++ + P+ ITF+ VLSAC H G V+EG+ F M ++FGI P +H++
Sbjct: 532 HRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYAL 591
Query: 497 MVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHN 556
MV LLGRA EA +I M P S W ALL AC H +E+ A K L+ N
Sbjct: 592 MVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKN 651
Query: 557 AVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWI 597
YV++SN+YA+ W++ V+ +M++ G G S I
Sbjct: 652 GGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 133/561 (23%), Positives = 260/561 (46%), Gaps = 48/561 (8%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTL-LYSKCGTLDNARTSFRLT 77
F +LLK CI +IS+ + I + S+ NHFT+ ++ + T + SF+L
Sbjct: 16 FHSLLKSCI-HGEISSSP----ITIFRDLLRSSLTPNHFTMSIFLQATT--TSFNSFKLQ 68
Query: 78 N------------NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAH 125
+ V+ ++++ +K + A+ LFDE+P D V +N LI ++
Sbjct: 69 VEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSR 128
Query: 126 RGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQ---LHCFAVLCGYSCYAS 182
G A +LF + G TL ++ C + G V Q +H A G +
Sbjct: 129 NGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQ-CGFVSQGRSVHGVAAKSGLELDSQ 187
Query: 183 VCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVR 242
V NA+++ Y L A +F EM + + +SWN MI A Q +EA+ +F M
Sbjct: 188 VKNALISFYSKCAELGSAEVLFREMKD--KSTVSWNTMIGAYSQSGLQEEAITVFKNMFE 245
Query: 243 MGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGM 302
++I T+ ++L+A E L H ++K G + V + L+ YS+C +
Sbjct: 246 KNVEISPVTIINLLSAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYSRCGC--L 297
Query: 303 LDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSA 362
+ +++ + +V +++S +++ D+ + A++ F ++ + D + +
Sbjct: 298 VSAERLYASAKQDSIVGLTSIVSCYAEKGDM-DIAVVYFSKTRQLCMKIDAVALVGILHG 356
Query: 363 CSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVS 422
C S +G +H AIKS + + + V N L+ MYSK ++ +F+ + E +S
Sbjct: 357 CKKSSHIDIGMSLHGYAIKSGLCTKTLVV-NGLITMYSKFDDVETVLFLFEQLQETPLIS 415
Query: 423 LNSMITGYAQHGVEGESLQLF-ELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFN-M 480
NS+I+G Q G + ++F ++M+ ++P+ IT S+L+ C+ + G++
Sbjct: 416 WNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYT 475
Query: 481 MKEKFGIEPEAKHFSC--MVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGN 538
++ F E ++F C ++D+ + G +AE + +++ P + W +++ G
Sbjct: 476 LRNNF----ENENFVCTALIDMYAKCGNEVQAESVFKSIK-APCTATWNSMISGYSLSG- 529
Query: 539 VELAVKAANKFLQLEPHNAVP 559
L +A + +L++ P
Sbjct: 530 --LQHRALSCYLEMREKGLKP 548
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 171/347 (49%), Gaps = 22/347 (6%)
Query: 212 RDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVL----TAFTCLEDLAG 267
RD +++++ +C + +F +++R + + FTM+ L T+F +
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 268 GMQFHGRMIKSGFNWNPHVGSGLIDMYSK--CAPRGMLDCMKVFEEISEPDLVLWNTMIS 325
+Q H + KSG + +V + L+++Y K C + +F+E+ E D V+WN +I
Sbjct: 71 QVQTH--LTKSGLDRFVYVKTSLLNLYLKKGCVTSAQM----LFDEMPERDTVVWNALIC 124
Query: 326 GFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIP 385
G+S++ DA F M + GF P + + C S G+ VH +A KS +
Sbjct: 125 GYSRN-GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLE 183
Query: 386 SNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFEL 445
+ V NAL++ YSKC L A +F M + +TVS N+MI Y+Q G++ E++ +F+
Sbjct: 184 LDS-QVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKN 242
Query: 446 MMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAG 505
M ++++ + +T I++LSA + + + K G+ + + +V R G
Sbjct: 243 MFEKNVEISPVTIINLLSA-------HVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCG 295
Query: 506 KLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQL 552
L AER+ + D + +++ + G++++AV +K QL
Sbjct: 296 CLVSAERLYASAKQDS-IVGLTSIVSCYAEKGDMDIAVVYFSKTRQL 341
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/382 (37%), Positives = 219/382 (57%), Gaps = 6/382 (1%)
Query: 217 WNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMI 276
WN ++ + + +A+ ++ MVR + D +++ V+ A + D G + H +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 277 KSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSED 336
+ GF + SG I +Y C + KVF+E E L WN +I G + H + +
Sbjct: 145 RLGFVGDEFCESGFITLY--CKAGEFENARKVFDENPERKLGSWNAIIGGLN-HAGRANE 201
Query: 337 ALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVH--ALAIKSDIPSNRVSVNNA 394
A+ F DM+R+G PDD + VT++C L SL Q+H L K++ S+ + + N+
Sbjct: 202 AVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSD-IMMLNS 260
Query: 395 LVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPN 454
L+ MY KCG + A +F+ M + N VS +SMI GYA +G E+L+ F M + + PN
Sbjct: 261 LIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPN 320
Query: 455 NITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERII 514
ITF+ VLSAC H G VEEG+ YF MMK +F +EP H+ C+VDLL R G+L+EA++++
Sbjct: 321 KITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVV 380
Query: 515 ETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWE 574
E MP P + W L+G C K G+VE+A A ++LEP N YV+L+N+YA G W+
Sbjct: 381 EEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWK 440
Query: 575 ESATVKRLMRERGVKKKPGCSW 596
+ V++LM+ + V K P S+
Sbjct: 441 DVERVRKLMKTKKVAKIPAYSY 462
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 53/324 (16%)
Query: 22 LLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPN 81
++K + D + GK LH++ ++ + + F LY K G +NAR
Sbjct: 123 VIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENAR---------- 172
Query: 82 VFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEARE 141
++FDE P + S+N +I H G AV +F + +
Sbjct: 173 ---------------------KVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKR 211
Query: 142 AGLCLDGFTLSGVIKAC--REDVGLVMQLHCFAVLCGYSCYASV--CNAVLARYGGRGLL 197
+GL D FT+ V +C D+ L QLH + + + N+++ YG G +
Sbjct: 212 SGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRM 271
Query: 198 SEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLT 257
A +F EM + R+ +SW++MIV EAL F +M G++ + T VL+
Sbjct: 272 DLASHIFEEMRQ--RNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLS 329
Query: 258 AFTCLEDLAGGMQFHGR----MIKSGFNWNP---HVGSGLIDMYSKCAPRGMLDCMKVFE 310
A C+ GG+ G+ M+KS F P H G ++D+ S+ + + KV E
Sbjct: 330 A--CVH---GGLVEEGKTYFAMMKSEFELEPGLSHYGC-IVDLLSRDGQ--LKEAKKVVE 381
Query: 311 EIS-EPDLVLWNTMISGFSQHEDL 333
E+ +P++++W ++ G + D+
Sbjct: 382 EMPMKPNVMVWGCLMGGCEKFGDV 405
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 258 bits (660), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 136/391 (34%), Positives = 218/391 (55%), Gaps = 38/391 (9%)
Query: 272 HGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHE 331
H + KSGF+ V + L+ Y+ L ++F+E+SE ++V W M+SG+++
Sbjct: 149 HTHLFKSGFHLYVVVQTALLHSYASSVSHITL-ARQLFDEMSERNVVSWTAMLSGYARSG 207
Query: 332 DLSEDALICFQDM--------------------------------QRAGFRPDDCSFSCV 359
D+S +A+ F+DM RP++ + CV
Sbjct: 208 DIS-NAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCV 266
Query: 360 TSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHN 419
SAC+ + L K +HA A + D+ S+ V V+N+LV +Y KCGNL +A VF + +
Sbjct: 267 LSACAQTGTLQLAKGIHAFAYRRDLSSD-VFVSNSLVDLYGKCGNLEEASSVFKMASKKS 325
Query: 420 TVSLNSMITGYAQHGVEGESLQLFELMMQ---EDIVPNNITFISVLSACAHTGKVEEGQK 476
+ NSMI +A HG E++ +FE MM+ DI P++ITFI +L+AC H G V +G+
Sbjct: 326 LTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRG 385
Query: 477 YFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKH 536
YF++M +FGIEP +H+ C++DLLGRAG+ +EA ++ TM W +LL AC+ H
Sbjct: 386 YFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIH 445
Query: 537 GNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSW 596
G+++LA A + L P+N M++N+Y G WEE+ +++++ + K PG S
Sbjct: 446 GHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSR 505
Query: 597 IQIDNKVHVFVAEDSSHPMIKEIHEYMGEML 627
I+IDN+VH F + D SHP +EI+ + ++
Sbjct: 506 IEIDNEVHQFYSLDKSHPETEEIYMILDSLI 536
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 121/287 (42%), Gaps = 38/287 (13%)
Query: 308 VFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDM--QRAGFRPDDCSFSCVTSACSN 365
+F+ S P+ L+ +++ +S L + F + R+ RP+ + V +
Sbjct: 79 IFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPY 138
Query: 366 LSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMY-SKCGNLHDARRVFDTMPEHNTVSLN 424
LSS VH KS V V AL+ Y S ++ AR++FD M E N VS
Sbjct: 139 LSSAFSTPLVHTHLFKSGF-HLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWT 197
Query: 425 SMITGYAQHGVEGESLQLFELMMQED--------------------------------IV 452
+M++GYA+ G ++ LFE M + D I
Sbjct: 198 AMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIR 257
Query: 453 PNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAER 512
PN +T + VLSACA TG ++ K + + + + + +VDL G+ G LEEA
Sbjct: 258 PNEVTVVCVLSACAQTGTLQLA-KGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASS 316
Query: 513 IIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVP 559
+ + M W +++ HG E A+ + ++L ++ P
Sbjct: 317 VFK-MASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKP 362
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 139/307 (45%), Gaps = 31/307 (10%)
Query: 52 YLSNHFTLLYSKCGTLDN---ARTSFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEI 108
Y+ LL+S ++ + AR F + NV S+ A++ + + A LF+++
Sbjct: 160 YVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDM 219
Query: 109 PRPDIVSYNTLIAAHAHRGEHGPAVRLFKEA-REAGLCLDGFTLSGVIKACRE--DVGLV 165
P D+ S+N ++AA G AV LF+ E + + T+ V+ AC + + L
Sbjct: 220 PERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLA 279
Query: 166 MQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACG 225
+H FA S V N+++ YG G L EA VF + + +WN+MI
Sbjct: 280 KGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASK--KSLTAWNSMINCFA 337
Query: 226 QCREGKEALVLFGEMVRMG---MKIDMFTMASVLTAFTCLEDLAGGMQFHGR----MIKS 278
+EA+ +F EM+++ +K D T +L A T GG+ GR ++ +
Sbjct: 338 LHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACT-----HGGLVSKGRGYFDLMTN 392
Query: 279 GFNWNP---HVGSGLIDMYSKCAPRGMLD-CMKVFEEIS-EPDLVLWNTMISG--FSQHE 331
F P H G LID+ + G D ++V + + D +W ++++ H
Sbjct: 393 RFGIEPRIEHYGC-LIDLLGRA---GRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHL 448
Query: 332 DLSEDAL 338
DL+E A+
Sbjct: 449 DLAEVAV 455
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 258 bits (659), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 172/521 (33%), Positives = 266/521 (51%), Gaps = 35/521 (6%)
Query: 86 NAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLC 145
N++ID K A LF D+VS+N++I+A + G A LFKE C
Sbjct: 433 NSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSC 492
Query: 146 LDGFTLS---GVIKACREDVGLVM--QLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEA 200
F+LS ++ +C L+ +HC+ L + G L+ A
Sbjct: 493 -SKFSLSTVLAILTSCDSSDSLIFGKSVHCW----------------LQKLGD---LTSA 532
Query: 201 WRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMG-MKIDMFTMASVLTAF 259
+ M E RD SWN++I C E+L F M R G ++ D+ T+ ++A
Sbjct: 533 FLRLETMSE-TRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISAS 591
Query: 260 TCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVL 319
L + G FHG IKS + + + LI MY +C + + +KVF IS+P+L
Sbjct: 592 GNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRC--KDIESAVKVFGLISDPNLCS 649
Query: 320 WNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALA 379
WN +IS SQ++ E FQ + P++ +F + SA + L S S G Q H
Sbjct: 650 WNCVISALSQNKAGRE----VFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHL 705
Query: 380 IKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGES 439
I+ +N V+ ALV MYS CG L +VF ++ + NS+I+ + HG+ ++
Sbjct: 706 IRRGFQANPF-VSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKA 764
Query: 440 LQLF-ELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMV 498
++LF EL ++ PN +FIS+LSAC+H+G ++EG Y+ M+EKFG++P +H +V
Sbjct: 765 MELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIV 824
Query: 499 DLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAV 558
D+LGRAGKL EA I + + W ALL AC HG+ +L + A ++EP NA
Sbjct: 825 DMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNAS 884
Query: 559 PYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQI 599
Y+ L+N Y G WEE+ +++++ + +KK PG S I +
Sbjct: 885 YYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 206/442 (46%), Gaps = 32/442 (7%)
Query: 104 LFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACREDVG 163
LFDE+ D++ +N++I A G + AV LF E G D TL A
Sbjct: 144 LFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHL 203
Query: 164 L--VMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMI 221
LHC A+ G +S+CNA++ Y LS A VF M RD +SWN ++
Sbjct: 204 SRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEH--RDIVSWNTIM 261
Query: 222 VACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFN 281
C +++L F M G + D T + V++A + +E+L G HG +IKSG++
Sbjct: 262 TKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYS 321
Query: 282 WNPHV--GSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALI 339
HV G+ +I MYSKC + VFEE+ D++ N +++GF+ + + E+A
Sbjct: 322 PEAHVSVGNSIISMYSKCGDTEAAE--TVFEELVCRDVISSNAILNGFAAN-GMFEEAFG 378
Query: 340 CFQDMQRAG-FRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAM 398
MQ +PD + +TS C +LS G+ VH ++ ++ S + V N+++ M
Sbjct: 379 ILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDM 438
Query: 399 YSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVP--NNI 456
Y KCG A +F T + VS NSMI+ ++Q+G ++ LF+ ++ E +
Sbjct: 439 YGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLS 498
Query: 457 TFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIET 516
T +++L++C + + G K C L + G L A +ET
Sbjct: 499 TVLAILTSCDSSDSLIFG-----------------KSVHCW---LQKLGDLTSAFLRLET 538
Query: 517 MPFDPGSIEWAALLGACRKHGN 538
M W +++ C G+
Sbjct: 539 MSETRDLTSWNSVISGCASSGH 560
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 193/403 (47%), Gaps = 11/403 (2%)
Query: 168 LHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQC 227
+HCFA+ CG + + +L YG G L + +F E+ E +D I WN+MI A Q
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKE--KDVIVWNSMITALNQN 166
Query: 228 REGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVG 287
A+ LF EM+ G + D T+ +A + L H I++G + +
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC 226
Query: 288 SGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRA 347
+ L+++Y+K +C VF + D+V WNT+++ + +L F+ M +
Sbjct: 227 NALMNLYAKGENLSSAEC--VFTHMEHRDIVSWNTIMTKCLANGH-PRKSLQYFKSMTGS 283
Query: 348 GFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDI-PSNRVSVNNALVAMYSKCGNLH 406
G D +FSCV SACS++ +LG+ +H L IKS P VSV N++++MYSKCG+
Sbjct: 284 GQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTE 343
Query: 407 DARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQED-IVPNNITFISVLSAC 465
A VF+ + + +S N+++ G+A +G+ E+ + M D I P+ T +S+ S C
Sbjct: 344 AAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSIC 403
Query: 466 AHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIE 525
EG+ + + ++D+ G+ G +AE + +T +
Sbjct: 404 GDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRD-LVS 462
Query: 526 WAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYA 568
W +++ A ++G KA N F ++ + LS + A
Sbjct: 463 WNSMISAFSQNG---FTHKAKNLFKEVVSEYSCSKFSLSTVLA 502
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 145/601 (24%), Positives = 241/601 (40%), Gaps = 118/601 (19%)
Query: 38 LHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAIIDACVKHSH 97
LH L I+T + + L N LY+K L +A F + ++ S+N I+ C+ + H
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGH 269
Query: 98 LHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKA 157
PR +++ FK +G D T S VI A
Sbjct: 270 -----------PR--------------------KSLQYFKSMTGSGQEADTVTFSCVISA 298
Query: 158 CR--EDVGLVMQLHCFAVLCGYS--CYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRD 213
C E++ L LH + GYS + SV N++++ Y G A VF E+ CRD
Sbjct: 299 CSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEEL--VCRD 356
Query: 214 EISWNAMIVACGQCREGKEALVLFGEMVRMG-MKIDMFTMASVLTAFTCLEDLAGGMQFH 272
IS NA++ +EA + +M + ++ D+ T+ S+ + L G H
Sbjct: 357 VISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVH 416
Query: 273 GRMIKSGFNWNP-HVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHE 331
G ++ V + +IDMY KC + + F+ + DLV WN+MIS FSQ+
Sbjct: 417 GYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELL--FKTTTHRDLVSWNSMISAFSQNG 474
Query: 332 DLSEDALICFQDMQRAGFRPDDCSFSC----------VTSACSNLSSPSLGKQVHALAIK 381
F + F+ +SC + ++C + S GK VH
Sbjct: 475 ---------FTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVH----- 520
Query: 382 SDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPE-HNTVSLNSMITGYAQHGVEGESL 440
K G+L A +TM E + S NS+I+G A G ESL
Sbjct: 521 ---------------CWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESL 565
Query: 441 QLFELMMQEDIVPNN-ITFISVLSACAHTGKVEEGQKYFNMMKEK--------------- 484
+ F+ M +E + ++ IT + +SA + G V +G+ + + +
Sbjct: 566 RAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITM 625
Query: 485 -------------FGI--EPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAAL 529
FG+ +P ++C++ L + E ++ + +P I + L
Sbjct: 626 YGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGL 685
Query: 530 LGACRKHGNVELAVKAANKFLQLEPHNAVPYV--MLSNMYASAGRWEESATVKRLMRERG 587
L A + G+ ++A ++ A P+V L +MY+S G E T ++ R G
Sbjct: 686 LSASTQLGSTSYGMQAHCHLIR-RGFQANPFVSAALVDMYSSCGMLE---TGMKVFRNSG 741
Query: 588 V 588
V
Sbjct: 742 V 742
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 132/330 (40%), Gaps = 52/330 (15%)
Query: 35 GKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAIIDACVK 94
G+ H L IK+ T L N +Y +C +++A F L ++PN+ S+N +I A +
Sbjct: 600 GRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQ 659
Query: 95 HSHLHLARELFDEIP-RPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSG 153
+ +LF + P+ +++ L++A G
Sbjct: 660 NKAGREVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYG--------------------- 698
Query: 154 VIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRD 213
MQ HC + G+ V A++ Y G+L +VF G
Sbjct: 699 ------------MQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRN--SGVNS 744
Query: 214 EISWNAMIVACGQCREGKEALVLFGEMVRMG-MKIDMFTMASVLTAFTCLEDLAGGMQFH 272
+WN++I A G G++A+ LF E+ M+ + + S+L+A + + G+ ++
Sbjct: 745 ISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYY 804
Query: 273 GRMIKSGFNWNPHVGSG--LIDMYSKCAPRGMLDCMKVFEEISEPDLV-LWNTMISGFSQ 329
+M + F P ++DM + + + + I EP +W ++S +
Sbjct: 805 KQM-EEKFGVKPVTEHRVWIVDMLGRAGK--LREAYEFITGIGEPQKAGVWGALLSACNY 861
Query: 330 HEDL---SEDALICFQDMQRAGFRPDDCSF 356
H D E A + F+ PD+ S+
Sbjct: 862 HGDTKLGKEVAEVLFE------MEPDNASY 885
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 160/589 (27%), Positives = 295/589 (50%), Gaps = 42/589 (7%)
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
+VF N+++ ++ + A LF + D+VS+N +IA +A E A +LF
Sbjct: 262 HVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLV 321
Query: 141 EAG-LCLDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCY-ASVCNAVLARYGGRGL 196
G + D T+ ++ C + D+ ++H + + Y SV NA+++ Y G
Sbjct: 322 HKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGD 381
Query: 197 LSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVL 256
S A+ F M +D ISWNA++ A + + L L ++ + +D T+ S+L
Sbjct: 382 TSAAYWAFSLMST--KDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLL 439
Query: 257 TAFTCLEDLAGGMQFHGRMIKSGF---NWNPHVGSGLIDMYSKC-------------APR 300
++ + + HG +K+G P +G+ L+D Y+KC + R
Sbjct: 440 KFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSER 499
Query: 301 GML-----------------DCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQD 343
L D +F E+S DL W+ M+ +++ +A+ F++
Sbjct: 500 RTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAE-SCCPNEAIGVFRE 558
Query: 344 MQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCG 403
+Q G RP+ + + C+ L+S L +Q H I+ + R+ L+ +Y+KCG
Sbjct: 559 IQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRL--KGTLLDVYAKCG 616
Query: 404 NLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLS 463
+L A VF + + V +M+ GYA HG E+L ++ M + +I P+++ ++L+
Sbjct: 617 SLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLT 676
Query: 464 ACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGS 523
AC H G +++G + ++ ++ G++P + ++C VDL+ R G+L++A + MP +P +
Sbjct: 677 ACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNA 736
Query: 524 IEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLM 583
W LL AC + ++L AN LQ E + +V++SNMYA+ +WE ++ LM
Sbjct: 737 NIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLM 796
Query: 584 RERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQ 632
+++ +KK GCSW+++D + +VFV+ D SHP I + + + +MK+
Sbjct: 797 KKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMKE 845
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 189/449 (42%), Gaps = 54/449 (12%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF +L C+ D GKS+H+ IK + T + N +Y+K G +
Sbjct: 124 TFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFI---------- 173
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLF- 136
P+ ++ FD I D+VS+N +IA + A R F
Sbjct: 174 -FPDAYT-------------------AFDGIADKDVVSWNAIIAGFSENNMMADAFRSFC 213
Query: 137 ---KEAREAGLCLDGFTLSGVIKACRE-DVGLV----MQLHCFAVLCGY-SCYASVCNAV 187
KE E T++ V+ C D + Q+H + V + + VCN++
Sbjct: 214 LMLKEPTEPNYA----TIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSL 269
Query: 188 LARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMG-MK 246
++ Y G + EA +F MG +D +SWN +I E +A LF +V G +
Sbjct: 270 VSFYLRVGRIEEAASLFTRMGS--KDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVS 327
Query: 247 IDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNW-NPHVGSGLIDMYSKCAPRGMLDC 305
D T+ S+L L DLA G + H +++ + + VG+ LI Y++
Sbjct: 328 PDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSA--A 385
Query: 306 MKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSN 365
F +S D++ WN ++ F+ + + + A D + + C N
Sbjct: 386 YWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEA-ITLDSVTILSLLKFCIN 444
Query: 366 LSSPSLGKQVHALAIKSDI--PSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNT-VS 422
+ K+VH ++K+ + + NAL+ Y+KCGN+ A ++F + E T VS
Sbjct: 445 VQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVS 504
Query: 423 LNSMITGYAQHGVEGESLQLFELMMQEDI 451
NS+++GY G ++ LF M D+
Sbjct: 505 YNSLLSGYVNSGSHDDAQMLFTEMSTTDL 533
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 127/621 (20%), Positives = 273/621 (43%), Gaps = 64/621 (10%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
F +++K C S D+++G++LH K + +S +Y+KC +D+ + FR
Sbjct: 23 VFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQM 82
Query: 78 NNPNVFSYNAIID----ACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAV 133
++ + +N ++ +C + + F + P+P V++ ++ V
Sbjct: 83 DSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPL---------CV 133
Query: 134 RLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGG 193
RL G + +G +H + + G V NA+++ Y
Sbjct: 134 RL------------GDSYNG------------KSMHSYIIKAGLEKDTLVGNALVSMYAK 169
Query: 194 RGLL-SEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTM 252
G + +A+ F + + +D +SWNA+I + +A F M++ + + T+
Sbjct: 170 FGFIFPDAYTAFDGIAD--KDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATI 227
Query: 253 ASVLTAFTCLE-DLA--GGMQFHGRMI-KSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKV 308
A+VL ++ ++A G Q H ++ +S + V + L+ Y + + + +
Sbjct: 228 ANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGR--IEEAASL 285
Query: 309 FEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSS 368
F + DLV WN +I+G++ + + + + + + PD + + C+ L+
Sbjct: 286 FTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTD 345
Query: 369 PSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMIT 428
+ GK++H+ ++ SV NAL++ Y++ G+ A F M + +S N+++
Sbjct: 346 LASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILD 405
Query: 429 GYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHT---GKVEEGQKYFNMMKEKF 485
+A + + L L ++ E I +++T +S+L C + GKV+E Y K
Sbjct: 406 AFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGY----SVKA 461
Query: 486 GI---EPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELA 542
G+ E E K + ++D + G +E A +I + + + +LL G+ +
Sbjct: 462 GLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHD-- 519
Query: 543 VKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNK 602
A F ++ + + ++ +YA + E+ V R ++ RG++ + I N
Sbjct: 520 -DAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNT----VTIMNL 574
Query: 603 VHVFVAEDSSHPMIKEIHEYM 623
+ V A+ +S ++++ H Y+
Sbjct: 575 LPV-CAQLASLHLVRQCHGYI 594
Score = 119 bits (298), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 184/417 (44%), Gaps = 26/417 (6%)
Query: 130 GPAVRLFKEARE-AGLCLDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNA 186
GP + + R +G D V+KAC D+ LH G+ + V +
Sbjct: 2 GPLRQFVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKS 61
Query: 187 VLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMI----VACGQCREGKEALVLFGEM-V 241
VL Y + + ++F +M D + WN ++ V+CG +E + F M
Sbjct: 62 VLNMYAKCRRMDDCQKMFRQMDS--LDPVVWNIVLTGLSVSCG-----RETMRFFKAMHF 114
Query: 242 RMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRG 301
K T A VL L D G H +IK+G + VG+ L+ MY+K G
Sbjct: 115 ADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKF---G 171
Query: 302 ML--DCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCV 359
+ D F+ I++ D+V WN +I+GFS++ ++ DA F M + P+ + + V
Sbjct: 172 FIFPDAYTAFDGIADKDVVSWNAIIAGFSEN-NMMADAFRSFCLMLKEPTEPNYATIANV 230
Query: 360 TSACSNLSSP---SLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP 416
C+++ G+Q+H+ ++ V V N+LV+ Y + G + +A +F M
Sbjct: 231 LPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMG 290
Query: 417 EHNTVSLNSMITGYAQHGVEGESLQLF-ELMMQEDIVPNNITFISVLSACAHTGKVEEGQ 475
+ VS N +I GYA + ++ QLF L+ + D+ P+++T IS+L CA + G+
Sbjct: 291 SKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGK 350
Query: 476 KYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGA 532
+ + + + + + ++ R G A M I W A+L A
Sbjct: 351 EIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMS-TKDIISWNAILDA 406
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 212/488 (43%), Gaps = 41/488 (8%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIK-TFIPHSTYLSNHFTLLYSKCGTLDNARTSFRL 76
T ++L C D+++GK +H+ ++ +++ T + N Y++ G A +F L
Sbjct: 332 TIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSL 391
Query: 77 TNNPNVFSYNAIIDACV----KHSHLHLARELFDEIPRPDIVSYNTLI-------AAHAH 125
+ ++ S+NAI+DA + L+L L +E D V+ +L+
Sbjct: 392 MSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKV 451
Query: 126 RGEHGPAVR--LFKEAREAGL---CLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCY 180
+ HG +V+ L + E L LD + G ++ + + + L L Y
Sbjct: 452 KEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHK---IFLGLSERRTLVSY--- 505
Query: 181 ASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEM 240
N++L+ Y G +A +F EM D +W+ M+ + EA+ +F E+
Sbjct: 506 ----NSLLSGYVNSGSHDDAQMLFTEMST--TDLTTWSLMVRIYAESCCPNEAIGVFREI 559
Query: 241 VRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPR 300
GM+ + T+ ++L L L Q HG +I+ G + + L+D+Y+KC
Sbjct: 560 QARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCG-- 616
Query: 301 GMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVT 360
+ VF+ + DLV++ M++G++ H ++AL+ + M + +PD + +
Sbjct: 617 SLKHAYSVFQSDARRDLVMFTAMVAGYAVHGR-GKEALMIYSHMTESNIKPDHVFITTML 675
Query: 361 SACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP-EHN 419
+AC + G Q++ + V + ++ G L DA MP E N
Sbjct: 676 TACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPN 735
Query: 420 TVSLNSMI---TGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQK 476
+++ T Y + + G S+ L + D N++ ++ +A A K E +
Sbjct: 736 ANIWGTLLRACTTYNRMDL-GHSVANHLLQAESDDTGNHVLISNMYAADA---KWEGVME 791
Query: 477 YFNMMKEK 484
N+MK+K
Sbjct: 792 LRNLMKKK 799
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 158/471 (33%), Positives = 253/471 (53%), Gaps = 42/471 (8%)
Query: 167 QLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQ 226
++H + G+ ++ +L + G LS A +VF E+ + ++N MI G
Sbjct: 55 KIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLS--AYNYMI--SGY 110
Query: 227 CREG--KEALVLFGEMVRMGMKIDMFTMASVLTAF-----TCLEDLAGGMQFHGRMIKSG 279
+ G KE L+L M G K D +T++ VL A T + + H R+IK
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 280 FNWNPHVGSGLIDMYSKC----APRGMLDCMK-------------------------VFE 310
+ + + L+D Y K + R + + MK +F
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFN 230
Query: 311 EISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPS 370
D+V++N M+ GFS+ + ++ ++ + MQRAGF P+ +F+ V ACS L+S
Sbjct: 231 TTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHE 290
Query: 371 LGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGY 430
+G+QVHA +KS + ++ + + ++L+ MY+KCG ++DARRVFD M E N S SMI GY
Sbjct: 291 VGQQVHAQIMKSGVYTH-IKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGY 349
Query: 431 AQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPE 490
++G E+L+LF M + I PN +TF+ LSAC+H+G V++G + F M+ + ++P+
Sbjct: 350 GKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPK 409
Query: 491 AKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFL 550
+H++C+VDL+GRAG L +A MP P S WAALL +C HGNVELA AA++
Sbjct: 410 MEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELF 469
Query: 551 QLEPHNAV-PYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQID 600
+L Y+ LSN+YAS +W+ + ++ +M+ R + K G SW D
Sbjct: 470 KLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWTSED 520
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 156/330 (47%), Gaps = 49/330 (14%)
Query: 267 GGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD-CMKVFEEISEPDLVLWNTMIS 325
G + H +IK+GF + ++ L+ ++ KC G L +VF+E+ +P L +N MIS
Sbjct: 52 AGKKIHADIIKTGFQPDLNISIKLLILHLKC---GCLSYARQVFDELPKPTLSAYNYMIS 108
Query: 326 GFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSP-----SLGKQVHALAI 380
G+ +H L ++ L+ Q M +G + D + S V A ++ S SL + VHA I
Sbjct: 109 GYLKH-GLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARII 167
Query: 381 KSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESL 440
K D+ + V + ALV Y K G L AR VF+TM + N V SMI+GY G ++
Sbjct: 168 KCDVELDDVLIT-ALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAE 226
Query: 441 QLFELMMQEDIV--------------------------------PNNITFISVLSACAHT 468
++F +DIV PN TF SV+ AC+
Sbjct: 227 EIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVL 286
Query: 469 GKVEEGQK-YFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWA 527
E GQ+ + +MK G+ K S ++D+ + G + +A R+ + M + W
Sbjct: 287 TSHEVGQQVHAQIMKS--GVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQ-EKNVFSWT 343
Query: 528 ALLGACRKHGNVELAVKAANKF--LQLEPH 555
+++ K+GN E A++ + ++EP+
Sbjct: 344 SMIDGYGKNGNPEEALELFTRMKEFRIEPN 373
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 9/226 (3%)
Query: 38 LHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAIIDACVKHSH 97
+HA IK + L Y K G L++ART F + NV ++I +
Sbjct: 162 VHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGF 221
Query: 98 LHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGP-AVRLFKEAREAGLCLDGFTLSGVIK 156
+ A E+F+ DIV YN ++ + GE +V ++ + AG + T + VI
Sbjct: 222 VEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIG 281
Query: 157 AC----REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCR 212
AC +VG Q+H + G + + +++L Y G +++A RVF +M E +
Sbjct: 282 ACSVLTSHEVG--QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQE--K 337
Query: 213 DEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTA 258
+ SW +MI G+ +EAL LF M ++ + T L+A
Sbjct: 338 NVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSA 383
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 7/158 (4%)
Query: 365 NLSSPSLGKQVHALAIKSDI-PSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSL 423
N +P GK++HA IK+ P +S+ L+ ++ KCG L AR+VFD +P+ +
Sbjct: 46 NSPAPKAGKKIHADIIKTGFQPDLNISIK--LLILHLKCGCLSYARQVFDELPKPTLSAY 103
Query: 424 NSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKE 483
N MI+GY +HG+ E L L + M + T VL A G + +
Sbjct: 104 NYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVH 163
Query: 484 ----KFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETM 517
K +E + + +VD ++GKLE A + ETM
Sbjct: 164 ARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETM 201
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF +++ C G+ +HA +K+ + + + +Y+KCG +++AR F
Sbjct: 275 TFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQM 334
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIP----RPDIVSYNTLIAAHAHRG 127
NVFS+ ++ID K+ + A ELF + P+ V++ ++A +H G
Sbjct: 335 QEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSG 388
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 166/572 (29%), Positives = 281/572 (49%), Gaps = 53/572 (9%)
Query: 31 DISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAIID 90
D+ G ++H ++ + ++ +YSKCG L+
Sbjct: 315 DLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELE---------------------- 352
Query: 91 ACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFT 150
+A +LF I D+VS++ +IA++ G+H A+ LF++ + + T
Sbjct: 353 ---------IAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVT 403
Query: 151 LSGVIKACREDVG--LVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMG 208
L+ V++ C L +HC+A+ AV++ Y G S A + F +
Sbjct: 404 LTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLP 463
Query: 209 EGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGG 268
+D +++NA+ Q + +A ++ M G+ D TM +L D A G
Sbjct: 464 --IKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARG 521
Query: 269 MQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEIS-EPDLVLWNTMISGF 327
+G++IK GF+ HV LI+M++KC + + +F++ E V WN M++G+
Sbjct: 522 SCVYGQIIKHGFDSECHVAHALINMFTKC--DALAAAIVLFDKCGFEKSTVSWNIMMNGY 579
Query: 328 SQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSN 387
H +E+A+ F+ M+ F+P+ +F + A + LS+ +G VH+ I+ S
Sbjct: 580 LLHGQ-AEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCS- 637
Query: 388 RVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMM 447
+ V N+LV MY+KCG + + + F + VS N+M++ YA HG+ ++ LF M
Sbjct: 638 QTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQ 697
Query: 448 QEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKL 507
+ ++ P++++F+SVLSAC H G VEEG++ F M E+ IE E +H++CMVDLLG+AG
Sbjct: 698 ENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLF 757
Query: 508 EEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMY 567
EA ++ M W ALL + R H N+ L+ A + ++LEP N + Y
Sbjct: 758 GEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLN-------PSHY 810
Query: 568 ASAGRWEESATVKRLMRERGVKKKPGCSWIQI 599
+ R E V R +KK P CSWI++
Sbjct: 811 SQDRRLGEVNNVSR------IKKVPACSWIEV 836
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 140/557 (25%), Positives = 242/557 (43%), Gaps = 63/557 (11%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
+FT LK C D G +H L + + Y+ +Y K L +AR
Sbjct: 102 SFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSAR------ 155
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
++FD++ D+V++NT+++ A G A+ LF
Sbjct: 156 -------------------------QVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFH 190
Query: 138 EAREAGLCLDGFTLSGVIKA---------CREDVGLVMQL-HCFAVLCGYSCYASVCNAV 187
+ R + +D +L +I A CR GLV++ FA G CN
Sbjct: 191 DMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGL--IDMYCNCA 248
Query: 188 LARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKI 247
Y + E WR +DE SW M+ A +E L LF M +++
Sbjct: 249 -DLYAAESVFEEVWR---------KDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRM 298
Query: 248 DMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMK 307
+ AS L A + DL G+ H ++ G + V + L+ MYSKC + + +
Sbjct: 299 NKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAE--Q 356
Query: 308 VFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLS 367
+F I + D+V W+ MI+ + Q ++A+ F+DM R +P+ + + V C+ ++
Sbjct: 357 LFINIEDRDVVSWSAMIASYEQAGQ-HDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVA 415
Query: 368 SPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMI 427
+ LGK +H AIK+DI S + A+++MY+KCG A + F+ +P + V+ N++
Sbjct: 416 ASRLGKSIHCYAIKADIES-ELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALA 474
Query: 428 TGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQ-KYFNMMKEKFG 486
GY Q G ++ +++ M + P++ T + +L CA G Y ++K F
Sbjct: 475 QGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFD 534
Query: 487 IEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAA 546
E H ++++ + L A + + F+ ++ W ++ HG E AV
Sbjct: 535 SECHVAH--ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATF 592
Query: 547 N--KFLQLEPHNAVPYV 561
K + +P NAV +V
Sbjct: 593 RQMKVEKFQP-NAVTFV 608
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 131/478 (27%), Positives = 223/478 (46%), Gaps = 16/478 (3%)
Query: 85 YNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE-AREAG 143
+N +I+A L+R +FD + P +V +N++I + G H A+ F + E G
Sbjct: 36 HNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKG 95
Query: 144 LCLDGFTLSGVIKAC--REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAW 201
+ D ++ + +KAC D +++H G + A++ Y L A
Sbjct: 96 IDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSAR 155
Query: 202 RVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTC 261
+VF +M +D ++WN M+ Q AL+LF +M + ID ++ +++ A +
Sbjct: 156 QVFDKMH--VKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSK 213
Query: 262 LEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWN 321
LE HG +IK GF + SGLIDMY CA + VFEE+ D W
Sbjct: 214 LEKSDVCRCLHGLVIKKGFIFA--FSSGLIDMYCNCAD--LYAAESVFEEVWRKDESSWG 269
Query: 322 TMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIK 381
TM++ ++ H E+ L F M+ R + + + A + + G +H A++
Sbjct: 270 TMMAAYA-HNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQ 328
Query: 382 SDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQ 441
+ + VSV +L++MYSKCG L A ++F + + + VS ++MI Y Q G E++
Sbjct: 329 QGLIGD-VSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAIS 387
Query: 442 LFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLL 501
LF MM+ I PN +T SVL CA G K + K IE E + + ++ +
Sbjct: 388 LFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLG-KSIHCYAIKADIESELETATAVISMY 446
Query: 502 GRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVP 559
+ G+ A + E +P ++ + AL + G+ A KA + + ++ H P
Sbjct: 447 AKCGRFSPALKAFERLPIKD-AVAFNALAQGYTQIGD---ANKAFDVYKNMKLHGVCP 500
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF N+++ + G S+H+ I+ T + N +Y+KCG ++++ F
Sbjct: 606 TFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEI 665
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIP----RPDIVSYNTLIAAHAHRGEHGPAV 133
+N + S+N ++ A H A LF + +PD VS+ ++++A H G
Sbjct: 666 SNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGK 725
Query: 134 RLFKEARE 141
R+F+E E
Sbjct: 726 RIFEEMGE 733
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 256 bits (653), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 165/502 (32%), Positives = 266/502 (52%), Gaps = 15/502 (2%)
Query: 101 ARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACRE 160
AR+LFD P + +N++I A+A + + LF + + D FT + + + E
Sbjct: 59 ARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSE 118
Query: 161 --DVGLVMQLHCFAVLCGYSCYASVC-NAVLARYGGRGLLSEAWRVFHEMGEGCRDEISW 217
D + +H A++ G + +C +A++ Y GL+ EA ++F + + D W
Sbjct: 119 SFDTKGLRCIHGIAIVSGLG-FDQICGSAIVKAYSKAGLIVEASKLFCSIPD--PDLALW 175
Query: 218 NAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIK 277
N MI+ G C + + LF M G + + +TM ++ + L H +K
Sbjct: 176 NVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLK 235
Query: 278 SGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDA 337
+ + +VG L++MYS+C + VF ISEPDLV +++I+G+S+ + ++A
Sbjct: 236 INLDSHSYVGCALVNMYSRCMC--IASACSVFNSISEPDLVACSSLITGYSRCGN-HKEA 292
Query: 338 LICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVA 397
L F +++ +G +PD + V +C+ LS GK+VH+ I+ + + + V +AL+
Sbjct: 293 LHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELD-IKVCSALID 351
Query: 398 MYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNIT 457
MYSKCG L A +F +PE N VS NS+I G HG + + F +++ ++P+ IT
Sbjct: 352 MYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEIT 411
Query: 458 FISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETM 517
F ++L C H+G + +GQ+ F MK +FGIEP+ +H+ MV L+G AGKLEEA + ++
Sbjct: 412 FSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSL 471
Query: 518 --PFDPGSIEWAALLGACRKHGNVELA-VKAANKFLQLEPHNAVPYVMLSNMYASAGRWE 574
P D G + ALL C H N LA V A N E +V VMLSN+YA GRW+
Sbjct: 472 QKPIDSGIL--GALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWD 529
Query: 575 ESATVKRLMRERGVKKKPGCSW 596
E ++ + E K PG SW
Sbjct: 530 EVERLRDGISESYGGKLPGISW 551
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 139/293 (47%), Gaps = 9/293 (3%)
Query: 86 NAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLC 145
+AI+ A K + A +LF IP PD+ +N +I + G + LF + G
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 146 LDGFTLSGVIKACREDVGLVM--QLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRV 203
+ +T+ + + L++ +H F + ++ V A++ Y ++ A V
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSV 264
Query: 204 FHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLE 263
F+ + E D ++ +++I +C KEAL LF E+ G K D +A VL + L
Sbjct: 265 FNSISE--PDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELS 322
Query: 264 DLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDC-MKVFEEISEPDLVLWNT 322
D G + H +I+ G + V S LIDMYSKC G+L C M +F I E ++V +N+
Sbjct: 323 DSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKC---GLLKCAMSLFAGIPEKNIVSFNS 379
Query: 323 MISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQV 375
+I G H + A F ++ G PD+ +FS + C + + G+++
Sbjct: 380 LILGLGLH-GFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEI 431
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 94/195 (48%), Gaps = 4/195 (2%)
Query: 270 QFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQ 329
+ H + KS +P+ + L Y+ ++ K+F+ E + LWN++I +++
Sbjct: 26 KLHSFVTKSKLARDPYFATQLARFYA--LNDDLISARKLFDVFPERSVFLWNSIIRAYAK 83
Query: 330 HEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRV 389
+ L F + R+ RPD+ +++C+ S + +H +AI S + +++
Sbjct: 84 AHQFT-TVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQI 142
Query: 390 SVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQE 449
+A+V YSK G + +A ++F ++P+ + N MI GY G + + LF LM
Sbjct: 143 -CGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHR 201
Query: 450 DIVPNNITFISVLSA 464
PN T +++ S
Sbjct: 202 GHQPNCYTMVALTSG 216
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/414 (33%), Positives = 225/414 (54%), Gaps = 33/414 (7%)
Query: 215 ISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGR 274
+ +NAMI E+L F M G+ D +T A +L + + L DL G HG
Sbjct: 68 LVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGE 127
Query: 275 MIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDL- 333
+I++GF+ + G++++Y+ G D KVF+E+SE ++V+WN MI GF D+
Sbjct: 128 LIRTGFHRLGKIRIGVVELYTSGGRMG--DAQKVFDEMSERNVVVWNLMIRGFCDSGDVE 185
Query: 334 -----------------------------SEDALICFQDMQRAGFRPDDCSFSCVTSACS 364
+AL F +M GF PD+ + V +
Sbjct: 186 RGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISA 245
Query: 365 NLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLN 424
+L GK +H+ A S + + ++V NALV Y K G+L A +F M N VS N
Sbjct: 246 SLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWN 305
Query: 425 SMITGYAQHGVEGESLQLFELMMQE-DIVPNNITFISVLSACAHTGKVEEGQKYFNMMKE 483
++I+G A +G + LF+ M++E + PN TF+ VL+ C++TG+VE G++ F +M E
Sbjct: 306 TLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMME 365
Query: 484 KFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAV 543
+F +E +H+ MVDL+ R+G++ EA + ++ MP + + W +LL ACR HG+V+LA
Sbjct: 366 RFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAE 425
Query: 544 KAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWI 597
AA + +++EP N+ YV+LSN+YA GRW++ V+ LM++ ++K G S I
Sbjct: 426 VAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 16/286 (5%)
Query: 307 KVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNL 366
+VF I P+++++N MI +S E +L F M+ G D+ +++ + +CS+L
Sbjct: 57 RVFSHIQNPNVLVFNAMIKCYSLVGPPLE-SLSFFSSMKSRGIWADEYTYAPLLKSCSSL 115
Query: 367 SSPSLGKQVHALAIKSDIPSNRVS-VNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNS 425
S GK VH I++ +R+ + +V +Y+ G + DA++VFD M E N V N
Sbjct: 116 SDLRFGKCVHGELIRTGF--HRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNL 173
Query: 426 MITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKF 485
MI G+ G L LF+ M + IV N + IS LS C G+ E + F M ++
Sbjct: 174 MIRGFCDSGDVERGLHLFKQMSERSIVSWN-SMISSLSKC---GRDREALELFCEMIDQ- 228
Query: 486 GIEPEAKHFSCMVDLLGRAGKLEEAERIIETMP----FDPGSIEWAALLGACRKHGNVEL 541
G +P+ ++ + G L+ + I T F AL+ K G++E
Sbjct: 229 GFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEA 288
Query: 542 AVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERG 587
A F +++ N V + L + A G+ E + M E G
Sbjct: 289 ATAI---FRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEG 331
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 139/324 (42%), Gaps = 14/324 (4%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T+ LLK C S D+ GK +H I+T + LY+ G + +A+ F
Sbjct: 104 TYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEM 163
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+ NV +N +I + LF ++ IVS+N++I++ + G A+ LF
Sbjct: 164 SERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFC 223
Query: 138 EAREAGLCLDGFTLSGV--IKACREDVGLVMQLHCFAVLCG-YSCYASVCNAVLARYGGR 194
E + G D T+ V I A + +H A G + + +V NA++ Y
Sbjct: 224 EMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKS 283
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMG-MKIDMFTMA 253
G L A +F +M R+ +SWN +I +G+ + LF M+ G + + T
Sbjct: 284 GDLEAATAIFRKMQR--RNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFL 341
Query: 254 SVLTAFTCLEDLAGGMQFHGRMIKSGFNW---NPHVGSGLIDMYSKCAPRGMLDCMKVFE 310
VL + + G + G M++ F H G+ ++D+ S+ + + K +
Sbjct: 342 GVLACCSYTGQVERGEELFGLMMER-FKLEARTEHYGA-MVDLMSRSGR--ITEAFKFLK 397
Query: 311 EIS-EPDLVLWNTMISGFSQHEDL 333
+ + +W +++S H D+
Sbjct: 398 NMPVNANAAMWGSLLSACRSHGDV 421
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 249 bits (636), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 181/623 (29%), Positives = 296/623 (47%), Gaps = 76/623 (12%)
Query: 21 NLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNP 80
+LL C+ + G+ LHA I + + + L YS LD A+T +T N
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQT---ITENS 144
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
+ LH P P +N LI ++ +V ++K
Sbjct: 145 EI---------------LH---------PLP----WNVLIGSYIRNKRFQESVSVYKRMM 176
Query: 141 EAGLCLDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLS 198
G+ D FT VIKAC D +H + + C VCNA+++ Y G +
Sbjct: 177 SKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVD 236
Query: 199 EAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV--- 255
A R+F M E RD +SWNA+I + EA L M G++ + T ++
Sbjct: 237 VARRLFDRMSE--RDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGG 294
Query: 256 --------------------------------LTAFTCLEDLAGGMQFHGRMIKS-GFNW 282
L A + + L G FH +I+S F+
Sbjct: 295 CLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSH 354
Query: 283 N-PHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICF 341
+ +V + LI MYS+C+ + VF+++ L WN++ISGF+ +E SE+
Sbjct: 355 DIDNVRNSLITMYSRCSD--LRHAFIVFQQVEANSLSTWNSIISGFAYNER-SEETSFLL 411
Query: 342 QDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSK 401
++M +GF P+ + + + + + + GK+ H ++ + + + N+LV MY+K
Sbjct: 412 KEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAK 471
Query: 402 CGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISV 461
G + A+RVFD+M + + V+ S+I GY + G +L F+ M + I P+++T ++V
Sbjct: 472 SGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAV 531
Query: 462 LSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDP 521
LSAC+H+ V EG F M+ FGI +H+SCMVDL RAG L++A I T+P++P
Sbjct: 532 LSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEP 591
Query: 522 GSIEWAALLGACRKHGNVELAVKAANK-FLQLEPHNAVPYVMLSNMYASAGRWEESATVK 580
S A LL AC HGN + AA+K L+ +P + Y++L++MYA G W + TVK
Sbjct: 592 SSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVK 651
Query: 581 RLMRERGVKKKPGCSWIQIDNKV 603
L+ + GV+K + ++ D+++
Sbjct: 652 TLLSDLGVQKAHEFALMETDSEL 674
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 185/417 (44%), Gaps = 32/417 (7%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T+ +++K C + D + G+ +H + + Y+ N +Y + G +D AR F
Sbjct: 186 TYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRM 245
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEI----PRPDIVSYNTLIAAHAHRGEHGPAV 133
+ + S+NAII+ L A +L D + IV++NT+ G + A+
Sbjct: 246 SERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGAL 305
Query: 134 RLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYAS-----VCNAVL 188
R + + + +KAC +G + F L SC S V N+++
Sbjct: 306 NCVVGMRNCNVRIGSVAMINGLKACSH-IGALKWGKVFHCLVIRSCSFSHDIDNVRNSLI 364
Query: 189 ARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKID 248
Y L A+ VF ++ +WN++I +E L EM+ G +
Sbjct: 365 TMYSRCSDLRHAFIVFQQVEANSLS--TWNSIISGFAYNERSEETSFLLKEMLLSGFHPN 422
Query: 249 MFTMASVLTAFTCLEDLAGGMQFHGRMIKSG------FNWNPHVGSGLIDMYSKCAPRGM 302
T+AS+L F + +L G +FH +++ WN L+DMY+K +
Sbjct: 423 HITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWN-----SLVDMYAKSGE--I 475
Query: 303 LDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSA 362
+ +VF+ + + D V + ++I G+ + E AL F+DM R+G +PD + V SA
Sbjct: 476 IAAKRVFDSMRKRDKVTYTSLIDGYGRLGK-GEVALAWFKDMDRSGIKPDHVTMVAVLSA 534
Query: 363 CSNLSSPSLGKQVHALAIKSDIPSN---RVSVNNALVAMYSKCGNLHDARRVFDTMP 416
CS+ +L ++ H L K + R+ + +V +Y + G L AR +F T+P
Sbjct: 535 CSH---SNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 10/224 (4%)
Query: 249 MFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKV 308
+++ AS+L+ + G Q H I SG ++ + L+ YS +LD +
Sbjct: 83 LYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAF---NLLDEAQT 139
Query: 309 FEEISEPDLVL-WNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLS 367
E SE L WN +I + +++ E + ++ M G R D+ ++ V AC+ L
Sbjct: 140 ITENSEILHPLPWNVLIGSYIRNKRFQESVSV-YKRMMSKGIRADEFTYPSVIKACAALL 198
Query: 368 SPSLGKQVHALAIKSDIPSNR--VSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNS 425
+ G+ VH ++ S+R + V NAL++MY + G + ARR+FD M E + VS N+
Sbjct: 199 DFAYGRVVHG---SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNA 255
Query: 426 MITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTG 469
+I Y GE+ +L + M + + +T+ ++ C G
Sbjct: 256 IINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 249 bits (636), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 181/623 (29%), Positives = 296/623 (47%), Gaps = 76/623 (12%)
Query: 21 NLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNP 80
+LL C+ + G+ LHA I + + + L YS LD A+T +T N
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQT---ITENS 144
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
+ LH P P +N LI ++ +V ++K
Sbjct: 145 EI---------------LH---------PLP----WNVLIGSYIRNKRFQESVSVYKRMM 176
Query: 141 EAGLCLDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLS 198
G+ D FT VIKAC D +H + + C VCNA+++ Y G +
Sbjct: 177 SKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVD 236
Query: 199 EAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV--- 255
A R+F M E RD +SWNA+I + EA L M G++ + T ++
Sbjct: 237 VARRLFDRMSE--RDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGG 294
Query: 256 --------------------------------LTAFTCLEDLAGGMQFHGRMIKS-GFNW 282
L A + + L G FH +I+S F+
Sbjct: 295 CLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSH 354
Query: 283 N-PHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICF 341
+ +V + LI MYS+C+ + VF+++ L WN++ISGF+ +E SE+
Sbjct: 355 DIDNVRNSLITMYSRCSD--LRHAFIVFQQVEANSLSTWNSIISGFAYNER-SEETSFLL 411
Query: 342 QDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSK 401
++M +GF P+ + + + + + + GK+ H ++ + + + N+LV MY+K
Sbjct: 412 KEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAK 471
Query: 402 CGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISV 461
G + A+RVFD+M + + V+ S+I GY + G +L F+ M + I P+++T ++V
Sbjct: 472 SGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAV 531
Query: 462 LSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDP 521
LSAC+H+ V EG F M+ FGI +H+SCMVDL RAG L++A I T+P++P
Sbjct: 532 LSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEP 591
Query: 522 GSIEWAALLGACRKHGNVELAVKAANK-FLQLEPHNAVPYVMLSNMYASAGRWEESATVK 580
S A LL AC HGN + AA+K L+ +P + Y++L++MYA G W + TVK
Sbjct: 592 SSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVK 651
Query: 581 RLMRERGVKKKPGCSWIQIDNKV 603
L+ + GV+K + ++ D+++
Sbjct: 652 TLLSDLGVQKAHEFALMETDSEL 674
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 185/417 (44%), Gaps = 32/417 (7%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T+ +++K C + D + G+ +H + + Y+ N +Y + G +D AR F
Sbjct: 186 TYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRM 245
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEI----PRPDIVSYNTLIAAHAHRGEHGPAV 133
+ + S+NAII+ L A +L D + IV++NT+ G + A+
Sbjct: 246 SERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGAL 305
Query: 134 RLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYAS-----VCNAVL 188
R + + + +KAC +G + F L SC S V N+++
Sbjct: 306 NCVVGMRNCNVRIGSVAMINGLKACSH-IGALKWGKVFHCLVIRSCSFSHDIDNVRNSLI 364
Query: 189 ARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKID 248
Y L A+ VF ++ +WN++I +E L EM+ G +
Sbjct: 365 TMYSRCSDLRHAFIVFQQVEANSLS--TWNSIISGFAYNERSEETSFLLKEMLLSGFHPN 422
Query: 249 MFTMASVLTAFTCLEDLAGGMQFHGRMIKSG------FNWNPHVGSGLIDMYSKCAPRGM 302
T+AS+L F + +L G +FH +++ WN L+DMY+K +
Sbjct: 423 HITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWN-----SLVDMYAKSGE--I 475
Query: 303 LDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSA 362
+ +VF+ + + D V + ++I G+ + E AL F+DM R+G +PD + V SA
Sbjct: 476 IAAKRVFDSMRKRDKVTYTSLIDGYGRLGK-GEVALAWFKDMDRSGIKPDHVTMVAVLSA 534
Query: 363 CSNLSSPSLGKQVHALAIKSDIPSN---RVSVNNALVAMYSKCGNLHDARRVFDTMP 416
CS+ +L ++ H L K + R+ + +V +Y + G L AR +F T+P
Sbjct: 535 CSH---SNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 10/224 (4%)
Query: 249 MFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKV 308
+++ AS+L+ + G Q H I SG ++ + L+ YS +LD +
Sbjct: 83 LYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAF---NLLDEAQT 139
Query: 309 FEEISEPDLVL-WNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLS 367
E SE L WN +I + +++ E + ++ M G R D+ ++ V AC+ L
Sbjct: 140 ITENSEILHPLPWNVLIGSYIRNKRFQESVSV-YKRMMSKGIRADEFTYPSVIKACAALL 198
Query: 368 SPSLGKQVHALAIKSDIPSNR--VSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNS 425
+ G+ VH ++ S+R + V NAL++MY + G + ARR+FD M E + VS N+
Sbjct: 199 DFAYGRVVHG---SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNA 255
Query: 426 MITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTG 469
+I Y GE+ +L + M + + +T+ ++ C G
Sbjct: 256 IINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 249 bits (636), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 190/634 (29%), Positives = 314/634 (49%), Gaps = 90/634 (14%)
Query: 21 NLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNP 80
++L C + D++ +H IKT I ++ L+ L +F + P
Sbjct: 17 HVLGSCKTSDDVN---QIHGRLIKTGIIKNSNLTTRIVL-------------AFASSRRP 60
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
Y A CV H + H+ F E+ P + +N +I +H+H + A+ L
Sbjct: 61 ----YLADFARCVFHEY-HVCSFSFGEVEDPFL--WNAVIKSHSHGKDPRQALLLLCLML 113
Query: 141 EAGLCLDGFTLSGVIKACREDVGLV---MQLHCFAVLCGYSCYASVCNAVLARYGGRGLL 197
E G+ +D F+LS V+KAC +G V MQ+H F G + N ++ Y G L
Sbjct: 114 ENGVSVDKFSLSLVLKACSR-LGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCL 172
Query: 198 SEAWRVFHEMGEGCRDEISWNAMI---VACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
+ ++F M + RD +S+N+MI V CG +E LF +++ M MK ++ + S
Sbjct: 173 GLSRQMFDRMPK--RDSVSYNSMIDGYVKCGLIVSARE---LF-DLMPMEMK-NLISWNS 225
Query: 255 VLTAFTCLEDLAGGMQFHGRMI-----KSGFNWNPHVGSGLIDMYSKCA----PRGMLDC 305
+++ + D G+ ++ K +WN +ID Y K +G+ D
Sbjct: 226 MISGYAQTSD---GVDIASKLFADMPEKDLISWN-----SMIDGYVKHGRIEDAKGLFDV 277
Query: 306 M-------------------------KVFEEISEPDLVLWNTMISGFSQHEDLSEDALIC 340
M +F+++ D+V +N+M++G+ Q++ +AL
Sbjct: 278 MPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNK-YHMEALEI 336
Query: 341 FQDMQR-AGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDI-PSNRVSVNNALVAM 398
F DM++ + PDD + V A + L S +H ++ ++ V AL+ M
Sbjct: 337 FSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGV--ALIDM 394
Query: 399 YSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQED---IVPNN 455
YSKCG++ A VF+ + + N+MI G A HG+ GES F++++Q + + P++
Sbjct: 395 YSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGL-GESA--FDMLLQIERLSLKPDD 451
Query: 456 ITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIE 515
ITF+ VL+AC+H+G V+EG F +M+ K IEP +H+ CMVD+L R+G +E A+ +IE
Sbjct: 452 ITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIE 511
Query: 516 TMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEE 575
MP +P + W L AC H E A + +N YV+LSNMYAS G W++
Sbjct: 512 EMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKD 571
Query: 576 SATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAE 609
V+ +M+ER ++K PGCSWI++D +VH F +
Sbjct: 572 VRRVRTMMKERKIEKIPGCSWIELDGRVHEFFVD 605
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 249 bits (636), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 228/402 (56%), Gaps = 15/402 (3%)
Query: 235 VLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFN-WNPHVGSGLIDM 293
+L + R G + D F +++TA+ L L + M K WN +I
Sbjct: 103 LLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWN-----AMITG 157
Query: 294 YSKCAPRG-MLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQR-AGFRP 351
Y + RG M M++F+ + ++ W T+ISGFSQ+ + SE AL F M++ +P
Sbjct: 158 YQR---RGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSE-ALKMFLCMEKDKSVKP 213
Query: 352 DDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRV 411
+ + V AC+NL +G+++ A ++ N + V NA + MYSKCG + A+R+
Sbjct: 214 NHITVVSVLPACANLGELEIGRRLEGYARENGFFDN-IYVCNATIEMYSKCGMIDVAKRL 272
Query: 412 FDTM-PEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGK 470
F+ + + N S NSMI A HG E+L LF M++E P+ +TF+ +L AC H G
Sbjct: 273 FEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGM 332
Query: 471 VEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALL 530
V +GQ+ F M+E I P+ +H+ CM+DLLGR GKL+EA +I+TMP P ++ W LL
Sbjct: 333 VVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLL 392
Query: 531 GACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKK 590
GAC HGNVE+A A+ +LEP N V++SN+YA+ +W+ +++LM++ + K
Sbjct: 393 GACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTK 452
Query: 591 KPGCSW-IQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMK 631
G S+ +++ VH F ED SHP EI++ + E+ R+MK
Sbjct: 453 AAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMK 494
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 142/306 (46%), Gaps = 18/306 (5%)
Query: 38 LHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAIIDACVKHSH 97
LH+ + ++ ++ Y+K G L AR F + +V +NA+I +
Sbjct: 104 LHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGD 163
Query: 98 LHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK-EAREAGLCLDGFTLSGVIK 156
+ A ELFD +PR ++ S+ T+I+ + G + A+++F ++ + + T+ V+
Sbjct: 164 MKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLP 223
Query: 157 ACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDE 214
AC ++ + +L +A G+ VCNA + Y G++ A R+F E+G R+
Sbjct: 224 ACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQ-RNL 282
Query: 215 ISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGR 274
SWN+MI + + EAL LF +M+R G K D T +L A C+ GGM G+
Sbjct: 283 CSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLA--CVH---GGMVVKGQ 337
Query: 275 MIKSGFNWNPHVGSGL------IDMYSKCAP-RGMLDCMKVFEEISEPDLVLWNTMISGF 327
+ + L ID+ + + D +K +PD V+W T++
Sbjct: 338 ELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMP--MKPDAVVWGTLLGAC 395
Query: 328 SQHEDL 333
S H ++
Sbjct: 396 SFHGNV 401
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 5/130 (3%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSF-RL 76
T ++L C + ++ G+ L + + Y+ N +YSKCG +D A+ F L
Sbjct: 217 TVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEEL 276
Query: 77 TNNPNVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPA 132
N N+ S+N++I + H A LF ++ R PD V++ L+ A H G
Sbjct: 277 GNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKG 336
Query: 133 VRLFKEAREA 142
LFK E
Sbjct: 337 QELFKSMEEV 346
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/397 (35%), Positives = 225/397 (56%), Gaps = 10/397 (2%)
Query: 216 SWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRM 275
+WN + E++ ++ EM R G+K + T +L A L G Q +
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 276 IKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSE 335
+K GF+++ +VG+ LI +Y C D KVF+E++E ++V WN++++ ++ L+
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTS--DARKVFDEMTERNVVSWNSIMTALVENGKLNL 197
Query: 336 DALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNAL 395
CF +M F PD+ + + SAC + SLGK VH+ + ++ N + AL
Sbjct: 198 -VFECFCEMIGKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVMVRELELN-CRLGTAL 253
Query: 396 VAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIV-PN 454
V MY+K G L AR VF+ M + N + ++MI G AQ+G E+LQLF MM+E V PN
Sbjct: 254 VDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPN 313
Query: 455 NITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERII 514
+TF+ VL AC+HTG V++G KYF+ M++ I+P H+ MVD+LGRAG+L EA I
Sbjct: 314 YVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFI 373
Query: 515 ETMPFDPGSIEWAALLGACRKHGNVE---LAVKAANKFLQLEPHNAVPYVMLSNMYASAG 571
+ MPF+P ++ W LL AC H + + + K + ++LEP + V+++N +A A
Sbjct: 374 KKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEAR 433
Query: 572 RWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVA 608
W E+A V+R+M+E +KK G S +++ H F +
Sbjct: 434 MWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFS 470
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 137/286 (47%), Gaps = 12/286 (4%)
Query: 269 MQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFS 328
+Q HG++ S + + S L+ + S + + + S+ WN + G+S
Sbjct: 30 LQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYS 89
Query: 329 QHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNR 388
D +++ + +M+R G +P+ +F + AC++ + G+Q+ +K +
Sbjct: 90 S-SDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFD- 147
Query: 389 VSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQ 448
V V N L+ +Y C DAR+VFD M E N VS NS++T ++G + F M+
Sbjct: 148 VYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIG 207
Query: 449 EDIVPNNITFISVLSACA---HTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAG 505
+ P+ T + +LSAC GK+ Q M++E +E + + +VD+ ++G
Sbjct: 208 KRFCPDETTMVVLLSACGGNLSLGKLVHSQV---MVRE---LELNCRLGTALVDMYAKSG 261
Query: 506 KLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ 551
LE A + E M D W+A++ ++G E A++ +K ++
Sbjct: 262 GLEYARLVFERM-VDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMK 306
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 137/329 (41%), Gaps = 48/329 (14%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF LLK C S ++ G+ + +K Y+ N+ LY C +AR
Sbjct: 115 TFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDAR------ 168
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
++FDE+ ++VS+N+++ A G+ F
Sbjct: 169 -------------------------KVFDEMTERNVVSWNSIMTALVENGKLNLVFECFC 203
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLL 197
E C D T+ ++ AC ++ L +H ++ + A++ Y G L
Sbjct: 204 EMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGL 263
Query: 198 SEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVR-MGMKIDMFTMASVL 256
A VF M + ++ +W+AMIV Q +EAL LF +M++ ++ + T VL
Sbjct: 264 EYARLVFERMVD--KNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVL 321
Query: 257 TAFTCLEDLAGGMQFHGRMIKSGFNWNP---HVGSGLIDMYSKCAPRGMLDCMKVFEEIS 313
A + + G ++ M K P H G+ ++D+ + G L+ + ++ I
Sbjct: 322 CACSHTGLVDDGYKYFHEMEKI-HKIKPMMIHYGA-MVDILGRA---GRLN--EAYDFIK 374
Query: 314 ----EPDLVLWNTMISGFSQHEDLSEDAL 338
EPD V+W T++S S H D ++ +
Sbjct: 375 KMPFEPDAVVWRTLLSACSIHHDEDDEGI 403
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 140/408 (34%), Positives = 229/408 (56%), Gaps = 11/408 (2%)
Query: 183 VCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVR 242
+ + ++ Y G A VF M + +WN++I + + ++A+ L+ +M
Sbjct: 129 ISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAE 188
Query: 243 MGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGM 302
G+K D FT VL A + + G H ++K GF ++ +V + L+ MY+KC +
Sbjct: 189 DGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCG--DI 246
Query: 303 LDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSA 362
+ VF+ I D V WN+M++G+ H L E AL F+ M + G PD + S V +
Sbjct: 247 VKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHE-ALDIFRLMVQNGIEPDKVAISSVLAR 305
Query: 363 CSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVS 422
+ G+Q+H I+ + +SV NAL+ +YSK G L A +FD M E +TVS
Sbjct: 306 VLSFKH---GRQLHGWVIRRGMEWE-LSVANALIVLYSKRGQLGQACFIFDQMLERDTVS 361
Query: 423 LNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMK 482
N++I+ H L+ FE M + + P+ ITF+SVLS CA+TG VE+G++ F++M
Sbjct: 362 WNAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMS 418
Query: 483 EKFGIEPEAKHFSCMVDLLGRAGKLEEA-ERIIETMPFDPGSIEWAALLGACRKHGNVEL 541
+++GI+P+ +H++CMV+L GRAG +EEA I++ M + G W ALL AC HGN ++
Sbjct: 419 KEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDI 478
Query: 542 AVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVK 589
AA + +LEP N + +L +Y+ A R E+ V+++M +RG++
Sbjct: 479 GEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 129/506 (25%), Positives = 220/506 (43%), Gaps = 87/506 (17%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTN 78
F +LL+ C S R I G +H L + ++ +S+ LY+ CG
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCG------------- 141
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDI--VSYNTLIAAHAHRGEHGPAVRLF 136
+ +A E+FD + + D ++N+LI+ +A G++ A+ L+
Sbjct: 142 ------------------YAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALY 183
Query: 137 KEAREAGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGR 194
+ E G+ D FT V+KAC V + +H V G+ V NA++ Y
Sbjct: 184 FQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKC 243
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
G + +A VF + +D +SWN+M+ EAL +F MV+ G++ D ++S
Sbjct: 244 GDIVKARNVFDMIPH--KDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISS 301
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD--CMKVFEEI 312
VL + G Q HG +I+ G W V + LI +YSK RG L C +F+++
Sbjct: 302 VLARVLSFKH---GRQLHGWVIRRGMEWELSVANALIVLYSK---RGQLGQACF-IFDQM 354
Query: 313 SEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLG 372
E D V WN +IS S+ + + L F+ M RA +PD +F V S C+N G
Sbjct: 355 LERDTVSWNAIISAHSK----NSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDG 410
Query: 373 KQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQ 432
+++ +L K ++ +V +Y + G + +A SMI +
Sbjct: 411 ERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAY---------------SMIV--QE 453
Query: 433 HGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAK 492
G+E + ++L AC G + G+ + F +EP+ +
Sbjct: 454 MGLEA----------------GPTVWGALLYACYLHGNTDIGEV---AAQRLFELEPDNE 494
Query: 493 H-FSCMVDLLGRAGKLEEAERIIETM 517
H F ++ + +A + E+ ER+ + M
Sbjct: 495 HNFELLIRIYSKAKRAEDVERVRQMM 520
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 108/244 (44%), Gaps = 45/244 (18%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF +LK C + G+++H +K + Y+ N ++Y+KCG + AR F +
Sbjct: 197 TFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMI 256
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAV 133
+ + S+N+++ + H LH A ++F + + PD V+ ++++A V
Sbjct: 257 PHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLA----------RV 306
Query: 134 RLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGG 193
FK R QLH + + G SV NA++ Y
Sbjct: 307 LSFKHGR--------------------------QLHGWVIRRGMEWELSVANALIVLYSK 340
Query: 194 RGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMA 253
RG L +A +F +M E RD +SWNA+I A + G L F +M R K D T
Sbjct: 341 RGQLGQACFIFDQMLE--RDTVSWNAIISAHSKNSNG---LKYFEQMHRANAKPDGITFV 395
Query: 254 SVLT 257
SVL+
Sbjct: 396 SVLS 399
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 115/234 (49%), Gaps = 10/234 (4%)
Query: 356 FSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTM 415
F+ + C +L + G +VH L I + N + +++ LV +Y+ CG A VFD M
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHL-IPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRM 153
Query: 416 PEHNT--VSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEE 473
+ ++ + NS+I+GYA+ G +++ L+ M ++ + P+ TF VL AC G V+
Sbjct: 154 SKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQI 213
Query: 474 GQK-YFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGA 532
G+ + +++KE FG + + +V + + G + +A + + +P + W ++L
Sbjct: 214 GEAIHRDLVKEGFGYDVYV--LNALVVMYAKCGDIVKARNVFDMIPHK-DYVSWNSMLTG 270
Query: 533 CRKHGNVELAVKAANKFLQ--LEPHN-AVPYVMLSNMYASAGRWEESATVKRLM 583
HG + A+ +Q +EP A+ V+ + GR ++R M
Sbjct: 271 YLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGM 324
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 157/525 (29%), Positives = 276/525 (52%), Gaps = 20/525 (3%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEA 139
+ ++++++D + A +F+ + ++ +NT+I ++ E A +F +
Sbjct: 64 SKLLAFSSVLD-------IRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQL 116
Query: 140 REAGLCLDGFTLSGVIKACRED--VGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLL 197
R GL LD F+ +K+C + V + LH A+ G+ + + NA++ Y G +
Sbjct: 117 RAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKI 176
Query: 198 SEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLT 257
S+A +VF EM + D ++++ ++ Q + AL LF M + + +++ T+ S L+
Sbjct: 177 SDARKVFDEMPQSV-DAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLS 235
Query: 258 AFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDL 317
A + L DL+G H IK G + + H+ + LI MY K G+ ++F+ D+
Sbjct: 236 AISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTG--GISSARRIFDCAIRKDV 293
Query: 318 VLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHA 377
V WN MI +++ L E+ + + M+ +P+ +F + S+C+ + +G+ V
Sbjct: 294 VTWNCMIDQYAK-TGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVAD 352
Query: 378 LAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEG 437
L + I + + + ALV MY+K G L A +F+ M + + S +MI+GY HG+
Sbjct: 353 LLEEERIALDAI-LGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAR 411
Query: 438 ESLQLFELMMQED--IVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFS 495
E++ LF M +E+ + PN ITF+ VL+AC+H G V EG + F M E + P+ +H+
Sbjct: 412 EAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYG 471
Query: 496 CMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPH 555
C+VDLLGRAG+LEEA +I +P S W ALL ACR +GN +L + ++
Sbjct: 472 CVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGET 531
Query: 556 NAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQID 600
+ ++L+ +A AG E+S L + R K+ G S I+I+
Sbjct: 532 HPADAILLAGTHAVAGNPEKSLD-NELNKGR---KEAGYSAIEIE 572
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 175/408 (42%), Gaps = 49/408 (12%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
+F LK C + +S G+ LH + +++ T L N Y CG + +
Sbjct: 127 SFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISD-------- 178
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRP-DIVSYNTLIAAHAHRGEHGPAVRLF 136
AR++FDE+P+ D V+++TL+ + + A+ LF
Sbjct: 179 -----------------------ARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLF 215
Query: 137 KEAREAGLCLDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGR 194
+ R++ + ++ TL + A + D+ H + G + A++ YG
Sbjct: 216 RIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKT 275
Query: 195 GLLSEAWRVFHEMGEGC---RDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFT 251
G +S A R+F C +D ++WN MI + +E + L +M MK + T
Sbjct: 276 GGISSARRIFD-----CAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSST 330
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD-CMKVFE 310
+L++ E G + + + +G+ L+DMY+K G+L+ +++F
Sbjct: 331 FVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKV---GLLEKAVEIFN 387
Query: 311 EISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAG--FRPDDCSFSCVTSACSNLSS 368
+ + D+ W MISG+ H L+ +A+ F M+ RP++ +F V +ACS+
Sbjct: 388 RMKDKDVKSWTAMISGYGAH-GLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGL 446
Query: 369 PSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP 416
G + +++ + +V +V + + G L +A + +P
Sbjct: 447 VMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLP 494
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/359 (36%), Positives = 209/359 (58%), Gaps = 9/359 (2%)
Query: 268 GMQFHGRMIKSG-FNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISG 326
G Q H ++K+G F + HV +G++ +Y + + +LD KVF+EI +PD+V W+ +++G
Sbjct: 135 GKQIHCWVVKNGVFLSDSHVQTGVLRIYVE--DKLLLDARKVFDEIPQPDVVKWDVLMNG 192
Query: 327 FSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPS 386
+ + L + L F++M G PD+ S + +AC+ + + + GK +H K
Sbjct: 193 YVRC-GLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIE 251
Query: 387 NRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELM 446
+ V V ALV MY+KCG + A VF + N S ++I GYA +G +++ E +
Sbjct: 252 SDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERL 311
Query: 447 MQED-IVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAG 505
+ED I P+++ + VL+ACAH G +EEG+ M+ ++ I P+ +H+SC+VDL+ RAG
Sbjct: 312 EREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAG 371
Query: 506 KLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNA----VPYV 561
+L++A +IE MP P + W ALL CR H NVEL A L LE N V
Sbjct: 372 RLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALV 431
Query: 562 MLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIH 620
LSN+Y S R E++ V+ ++ +RGV+K PG S +++D V FV+ D SHP + +IH
Sbjct: 432 QLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIH 490
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 176/379 (46%), Gaps = 27/379 (7%)
Query: 57 FTLLYSKCGTLDNARTSFRL----TNNPNVFSYNAIIDACVK----HSHLHLARELFDEI 108
L +C T+ +++ L + N ++ + ++ A + + H H A +FD I
Sbjct: 14 LILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSI 73
Query: 109 PRPDIVSYNTLIAAHAHRGEHGPAVRLF----KEARE---AGLCLDGFTLSGVIKACRED 161
P+ Y+T+I + + +R F KE E F + +KAC
Sbjct: 74 EIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFS 133
Query: 162 VGLVMQLHCFAVLCG-YSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAM 220
VG Q+HC+ V G + + V VL Y LL +A +VF E+ + D + W+ +
Sbjct: 134 VG--KQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQP--DVVKWDVL 189
Query: 221 IVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRM-IKSG 279
+ +C G E L +F EM+ G++ D F++ + LTA + LA G H + KS
Sbjct: 190 MNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSW 249
Query: 280 FNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALI 339
+ VG+ L+DMY+KC + ++VF++++ ++ W +I G++ + ++ A+
Sbjct: 250 IESDVFVGTALVDMYAKCG--CIETAVEVFKKLTRRNVFSWAALIGGYAAY-GYAKKAMT 306
Query: 340 CFQDMQRA-GFRPDDCSFSCVTSACSNLSSPSLGKQ-VHALAIKSDIPSNRVSVNNALVA 397
C + ++R G +PD V +AC++ G+ + + + +I + +V
Sbjct: 307 CLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHY-SCIVD 365
Query: 398 MYSKCGNLHDARRVFDTMP 416
+ + G L DA + + MP
Sbjct: 366 LMCRAGRLDDALNLIEKMP 384
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 161/375 (42%), Gaps = 38/375 (10%)
Query: 216 SWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRM 275
SW ++I+A +C K+ + G+ + + ++ +LTAF L +L
Sbjct: 10 SWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNL---------- 59
Query: 276 IKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMIS--GFSQHEDL 333
N + H S +F+ I P+ +++TMI S L
Sbjct: 60 -----NKHFHYASS------------------IFDSIEIPNSFVYDTMIRICSRSSQPHL 96
Query: 334 SEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNN 393
+ + P +F + AC S+GKQ+H +K+ + + V
Sbjct: 97 GLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQT 156
Query: 394 ALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVP 453
++ +Y + L DAR+VFD +P+ + V + ++ GY + G+ E L++F M+ + + P
Sbjct: 157 GVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEP 216
Query: 454 NNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERI 513
+ + + L+ACA G + +G+ +K+K IE + + +VD+ + G +E A +
Sbjct: 217 DEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEV 276
Query: 514 IETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASA--G 571
+ + WAAL+G +G + A+ + + + V+L + A A G
Sbjct: 277 FKKLT-RRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGG 335
Query: 572 RWEESATVKRLMRER 586
EE ++ M R
Sbjct: 336 FLEEGRSMLENMEAR 350
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 119/270 (44%), Gaps = 24/270 (8%)
Query: 101 ARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACRE 160
AR++FDEIP+PD+V ++ L+ + G + +F+E GL D F+++ + AC +
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQ 230
Query: 161 DVGLVMQ---LHCFAVLCGY-SCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEIS 216
VG + Q +H F + V A++ Y G + A VF ++ R+ S
Sbjct: 231 -VGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTR--RNVFS 287
Query: 217 WNAMIVACGQCREGKEALVLFGEMVRM-GMKIDMFTMASVLTAFTCLEDLAGGMQFHGRM 275
W A+I K+A+ + R G+K D + VL A C GG GR
Sbjct: 288 WAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAA--CAH---GGFLEEGRS 342
Query: 276 IKSGFNWNPHVG------SGLIDMYSKCAPRGMLDCMKVFEEIS-EPDLVLWNTMISGFS 328
+ + S ++D+ C + D + + E++ +P +W +++G
Sbjct: 343 MLENMEARYEITPKHEHYSCIVDLM--CRAGRLDDALNLIEKMPMKPLASVWGALLNGCR 400
Query: 329 QHE--DLSEDALICFQDMQRAGFRPDDCSF 356
H+ +L E A+ D+++ ++ +
Sbjct: 401 THKNVELGELAVKNLLDLEKGNVEEEEAAL 430
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 243 bits (620), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 156/497 (31%), Positives = 255/497 (51%), Gaps = 16/497 (3%)
Query: 104 LFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCL-DGFTLSGVIKACRED- 161
+F+ +P P +N LI ++++ V + GL D +T V+K C +
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 162 -VGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAM 220
V + +H + G+ V + + YG L A +VF EM E R+ +SW A+
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPE--RNAVSWTAL 182
Query: 221 IVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGF 280
+VA + E +EA +F M ++ + +++ DL + M K
Sbjct: 183 VVAYVKSGELEEAKSMFDLMPER----NLGSWNALVDGLVKSGDLVNAKKLFDEMPKR-- 236
Query: 281 NWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALIC 340
+ + +ID Y+K M+ +FEE D+ W+ +I G++Q+ +E A
Sbjct: 237 --DIISYTSMIDGYAKGGD--MVSARDLFEEARGVDVRAWSALILGYAQNGQPNE-AFKV 291
Query: 341 FQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYS 400
F +M +PD+ + SACS + L ++V + + + V AL+ M +
Sbjct: 292 FSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNA 351
Query: 401 KCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFIS 460
KCG++ A ++F+ MP+ + VS SM+ G A HG E+++LFE M+ E IVP+ + F
Sbjct: 352 KCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTV 411
Query: 461 VLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFD 520
+L C + VEEG +YF +M++K+ I H+SC+V+LL R GKL+EA +I++MPF+
Sbjct: 412 ILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFE 471
Query: 521 PGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVK 580
+ W +LLG C HGN E+A A +LEP +A YV+LSN+YA+ RW + A ++
Sbjct: 472 AHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLR 531
Query: 581 RLMRERGVKKKPGCSWI 597
M E G+ K G SWI
Sbjct: 532 DKMNENGITKICGRSWI 548
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 186/446 (41%), Gaps = 66/446 (14%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF ++K C + + G S+H L ++ + F Y KC L +AR F
Sbjct: 112 TFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEM 171
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
N S+ A++ A VK L A+ +FD +P ++ S+N L+ G+ A +LF
Sbjct: 172 PERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFD 231
Query: 138 EAREAGLC-----LDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYG 192
E + + +DG+ G + + R+ F G A +A++ Y
Sbjct: 232 EMPKRDIISYTSMIDGYAKGGDMVSARD---------LFEEARGVDVRA--WSALILGYA 280
Query: 193 GRGLLSEAWRVFHEM-GEGCR-DEISWNAMIVACGQ--CREGKEALVLFGEMVRMGMKID 248
G +EA++VF EM + + DE ++ AC Q C E E K+D
Sbjct: 281 QNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCE-------------KVD 327
Query: 249 MFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD-CMK 307
+ H RM K + +V LIDM +KC G +D K
Sbjct: 328 SY--------------------LHQRMNKFS---SHYVVPALIDMNAKC---GHMDRAAK 361
Query: 308 VFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLS 367
+FEE+ + DLV + +M+ G + H SE A+ F+ M G PD+ +F+ + C
Sbjct: 362 LFEEMPQRDLVSYCSMMEGMAIHGCGSE-AIRLFEKMVDEGIVPDEVAFTVILKVCGQSR 420
Query: 368 SPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP-EHNTVSLNSM 426
G + L K + +V + S+ G L +A + +MP E + + S+
Sbjct: 421 LVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSL 480
Query: 427 ITGYAQHG----VEGESLQLFELMMQ 448
+ G + HG E + LFEL Q
Sbjct: 481 LGGCSLHGNTEIAEVVARHLFELEPQ 506
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 3/170 (1%)
Query: 374 QVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQH 433
Q+HA I+ + ++ ++ + + S +L + VF+ +P T N +I GY+
Sbjct: 28 QIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGYSNK 87
Query: 434 GVEGESLQLFELMMQEDIV-PNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAK 492
+ E++ + MM+ + P+ TF V+ C++ G+V G ++ + G + +
Sbjct: 88 FLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVL-RIGFDKDVV 146
Query: 493 HFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELA 542
+ VD G+ L A ++ MP + ++ W AL+ A K G +E A
Sbjct: 147 VGTSFVDFYGKCKDLFSARKVFGEMP-ERNAVSWTALVVAYVKSGELEEA 195
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 242 bits (618), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 123/332 (37%), Positives = 192/332 (57%), Gaps = 10/332 (3%)
Query: 268 GMQFHGRMIK--SGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMIS 325
G H ++K N + V + L+ Y+ C + + +FE I EPDL WNT+++
Sbjct: 132 GRALHAHVLKFLEPVNHDRFVQAALVGFYANCGK--LREARSLFERIREPDLATWNTLLA 189
Query: 326 GFSQHE--DLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSD 383
++ E D E+ L+ F MQ RP++ S + +C+NL G H +K++
Sbjct: 190 AYANSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNN 246
Query: 384 IPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLF 443
+ N+ V +L+ +YSKCG L AR+VFD M + + N+MI G A HG E ++L+
Sbjct: 247 LTLNQF-VGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELY 305
Query: 444 ELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGR 503
+ ++ + +VP++ TF+ +SAC+H+G V+EG + FN MK +GIEP+ +H+ C+VDLLGR
Sbjct: 306 KSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGR 365
Query: 504 AGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVML 563
+G+LEEAE I+ MP P + W + LG+ + HG+ E A L LE N+ YV+L
Sbjct: 366 SGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLL 425
Query: 564 SNMYASAGRWEESATVKRLMRERGVKKKPGCS 595
SN+YA RW + + LM++ V K PG S
Sbjct: 426 SNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 180/430 (41%), Gaps = 60/430 (13%)
Query: 21 NLLKQCISQRDISTGKSLHALYIKTFIPHSTY-LSNHFTLLYSKCGTLDNARTSFRLTNN 79
NL+ +C S +++ K +HA I + H TY LS L + C L A + R N
Sbjct: 14 NLISKCKSLQNL---KQIHAQIITIGLSHHTYPLSKLLHLSSTVC--LSYALSILRQIPN 68
Query: 80 PNVFSYNAIIDACVKH---SHLHLARELFDEI--PRPDIVSYNTLIAAHAHRGEHGPAVR 134
P+VF YN +I + V + + HLA L+D+I R + V N
Sbjct: 69 PSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNE---------------- 112
Query: 135 LFKEAREAGLCLDGFTLSGVIKACREDV-----GLVMQLHCFAVLCGYSCYASVCNAVLA 189
FT + KA D G + H L + V A++
Sbjct: 113 --------------FTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVG 158
Query: 190 RYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCRE---GKEALVLFGEMVRMGMK 246
Y G L EA +F + E D +WN ++ A E +E L+LF +RM ++
Sbjct: 159 FYANCGKLREARSLFERIREP--DLATWNTLLAAYANSEEIDSDEEVLLLF---MRMQVR 213
Query: 247 IDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD-C 305
+ ++ +++ + L + G+ H ++K+ N VG+ LID+YSKC G L
Sbjct: 214 PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKC---GCLSFA 270
Query: 306 MKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSN 365
KVF+E+S+ D+ +N MI G + H ++ + ++ + G PD +F SACS+
Sbjct: 271 RKVFDEMSQRDVSCYNAMIRGLAVH-GFGQEGIELYKSLISQGLVPDSATFVVTISACSH 329
Query: 366 LSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNS 425
G Q+ +V LV + + G L +A MP +L
Sbjct: 330 SGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWR 389
Query: 426 MITGYAQ-HG 434
G +Q HG
Sbjct: 390 SFLGSSQTHG 399
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/359 (36%), Positives = 208/359 (57%), Gaps = 9/359 (2%)
Query: 268 GMQFHGRMIKSG-FNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISG 326
G Q H ++K+G F + HV +G++ +Y + + + D KVF+EI +PD+V W+ +++G
Sbjct: 135 GKQIHCWVVKNGVFLSDGHVQTGVLRIYVE--DKLLFDARKVFDEIPQPDVVKWDVLMNG 192
Query: 327 FSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPS 386
+ + L + L F++M G PD+ S + +AC+ + + + GK +H K
Sbjct: 193 YVRC-GLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIE 251
Query: 387 NRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELM 446
+ V V ALV MY+KCG + A VF+ + N S ++I GYA +G ++ + +
Sbjct: 252 SDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRI 311
Query: 447 MQED-IVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAG 505
+ED I P+++ + VL+ACAH G +EEG+ M+ ++GI P+ +H+SC+VDL+ RAG
Sbjct: 312 EREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAG 371
Query: 506 KLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNA----VPYV 561
+L++A +IE MP P + W ALL CR H NVEL A L LE N V
Sbjct: 372 RLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALV 431
Query: 562 MLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIH 620
LSN+Y S R E+ V+ ++ +RG++K PG S +++D V FV+ D SHP + +IH
Sbjct: 432 QLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIH 490
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 164/381 (43%), Gaps = 39/381 (10%)
Query: 216 SWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRM 275
SW ++I+A +C K+ + G+ + + ++ +LTAF L +L
Sbjct: 10 SWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNL---------- 59
Query: 276 IKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMIS--GFSQHEDL 333
N + H S +F+ I P+ +++TMI S L
Sbjct: 60 -----NKHFHYASS------------------IFDSIEIPNSFVYDTMIRICSRSSQPHL 96
Query: 334 SEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNN 393
+ + P +F + AC S+GKQ+H +K+ + + V
Sbjct: 97 GLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQT 156
Query: 394 ALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVP 453
++ +Y + L DAR+VFD +P+ + V + ++ GY + G+ E L++F+ M+ I P
Sbjct: 157 GVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEP 216
Query: 454 NNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERI 513
+ + + L+ACA G + +G+ +K+K IE + + +VD+ + G +E A +
Sbjct: 217 DEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEV 276
Query: 514 IETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASA--G 571
E + WAAL+G +G + A ++ + + V+L + A A G
Sbjct: 277 FEKLT-RRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGG 335
Query: 572 RWEESATVKRLMRER-GVKKK 591
EE T+ M R G+ K
Sbjct: 336 FLEEGRTMLENMEARYGITPK 356
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 188/414 (45%), Gaps = 36/414 (8%)
Query: 57 FTLLYSKCGTLDNARTSFRL----TNNPNVFSYNAIIDACVK----HSHLHLARELFDEI 108
L +C T+ +++ L + N ++ + ++ A + + H H A +FD I
Sbjct: 14 LILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSI 73
Query: 109 PRPDIVSYNTLIAAHAHRGEHGPAVRLF----KEARE---AGLCLDGFTLSGVIKACRED 161
P+ Y+T+I + + +R F KE E F + +KAC
Sbjct: 74 EIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFS 133
Query: 162 VGLVMQLHCFAVLCG-YSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAM 220
VG Q+HC+ V G + V VL Y LL +A +VF E+ + D + W+ +
Sbjct: 134 VG--KQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQP--DVVKWDVL 189
Query: 221 IVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGF 280
+ +C G E L +F EM+ G++ D F++ + LTA + LA G H + K
Sbjct: 190 MNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKK-- 247
Query: 281 NW---NPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDA 337
W + VG+ L+DMY+KC + ++VFE+++ ++ W +I G++ + ++ A
Sbjct: 248 RWIESDVFVGTALVDMYAKCG--CIETAVEVFEKLTRRNVFSWAALIGGYAAY-GYAKKA 304
Query: 338 LICFQDMQRA-GFRPDDCSFSCVTSACSNLSSPSLGK-QVHALAIKSDIPSNRVSVNNAL 395
C ++R G +PD V +AC++ G+ + + + I + +
Sbjct: 305 TTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHY-SCI 363
Query: 396 VAMYSKCGNLHDARRVFDTMPEHNTVSL-NSMITGYAQHGVEGESLQLFELMMQ 448
V + + G L DA + + MP S+ +++ G H ++++L EL +Q
Sbjct: 364 VDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTH----KNVELGELAVQ 413
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 24/270 (8%)
Query: 101 ARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACRE 160
AR++FDEIP+PD+V ++ L+ + G + +FKE G+ D F+++ + AC +
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQ 230
Query: 161 DVGLVMQ---LHCFAVLCGY-SCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEIS 216
VG + Q +H F + V A++ Y G + A VF ++ R+ S
Sbjct: 231 -VGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTR--RNVFS 287
Query: 217 WNAMIVACGQCREGKEALVLFGEMVRM-GMKIDMFTMASVLTAFTCLEDLAGGMQFHGRM 275
W A+I K+A + R G+K D + VL A C GG GR
Sbjct: 288 WAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAA--CAH---GGFLEEGRT 342
Query: 276 I------KSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEIS-EPDLVLWNTMISGFS 328
+ + G S ++D+ C + D + + E++ +P +W +++G
Sbjct: 343 MLENMEARYGITPKHEHYSCIVDLM--CRAGRLDDALDLIEKMPMKPLASVWGALLNGCR 400
Query: 329 QHE--DLSEDALICFQDMQRAGFRPDDCSF 356
H+ +L E A+ D+++ ++ +
Sbjct: 401 THKNVELGELAVQNLLDLEKGNVEEEEAAL 430
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 239 bits (609), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 130/337 (38%), Positives = 191/337 (56%), Gaps = 10/337 (2%)
Query: 305 CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAG-FRPDDCSFSCVTSAC 363
C +VF+++ E ++ WN +I G++Q+ +SE L F+ M G P+D + + V SAC
Sbjct: 140 CERVFDDMPERNVFSWNGLIKGYAQNGRVSE-VLGSFKRMVDEGSVVPNDATMTLVLSAC 198
Query: 364 SNLSSPSLGKQVHALAIKSDIPSNRVSVN--NALVAMYSKCGNLHDARRVFDTMPEHNTV 421
+ L + GK VH + N+V VN NAL+ MY KCG + A VF + + +
Sbjct: 199 AKLGAFDFGKWVHKYG--ETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLI 256
Query: 422 SLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMM 481
S N+MI G A HG E+L LF M I P+ +TF+ VL AC H G VE+G YFN M
Sbjct: 257 SWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSM 316
Query: 482 KEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVEL 541
F I PE +H C+VDLL RAG L +A I MP ++ WA LLGA + + V++
Sbjct: 317 FTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDI 376
Query: 542 AVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDN 601
A + ++LEP N +VMLSN+Y AGR++++A +K MR+ G KK+ G SWI+ D+
Sbjct: 377 GEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDD 436
Query: 602 KVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPD 638
+ F + HP +E+ +LR++K + D
Sbjct: 437 GLVKFYSSGEKHPRTEELQ----RILRELKSFNILRD 469
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 120/264 (45%), Gaps = 35/264 (13%)
Query: 307 KVFEEISEPDLVLWNTMISGF---------SQHEDLSEDALICFQDMQRAGFRPDDCSFS 357
KVF E+ E ++VLW +MI+G+ ++ DLS + I + +G+
Sbjct: 49 KVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGY-------- 100
Query: 358 CVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPE 417
+G + A ++ +P V N ++ Y+ G++ RVFD MPE
Sbjct: 101 -----------IEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPE 149
Query: 418 HNTVSLNSMITGYAQHGVEGESLQLFELMMQE-DIVPNNITFISVLSACAHTGKVEEGQK 476
N S N +I GYAQ+G E L F+ M+ E +VPN+ T VLSACA G + G K
Sbjct: 150 RNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFG-K 208
Query: 477 YFNMMKEKFGIEP-EAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRK 535
+ + E G + + ++D+ G+ G +E A + + + I W ++
Sbjct: 209 WVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIK-RRDLISWNTMINGLAA 267
Query: 536 HGNVELAVKAANKFLQLEPHNAVP 559
HG+ +A N F +++ P
Sbjct: 268 HGH---GTEALNLFHEMKNSGISP 288
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 145/334 (43%), Gaps = 28/334 (8%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTN 78
+T+++ + +D+ + + Y L N Y + G + AR+ F
Sbjct: 62 WTSMINGYLLNKDLVSARR----YFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMP 117
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
+V S+N +++ + +FD++P ++ S+N LI +A G + FK
Sbjct: 118 CRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKR 177
Query: 139 AREAGLCL-DGFTLSGVIKACRE----DVGLVMQLHCFAVLCGYS-CYASVCNAVLARYG 192
+ G + + T++ V+ AC + D G +H + GY+ +V NA++ YG
Sbjct: 178 MVDEGSVVPNDATMTLVLSACAKLGAFDFG--KWVHKYGETLGYNKVDVNVKNALIDMYG 235
Query: 193 GRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTM 252
G + A VF G RD ISWN MI G EAL LF EM G+ D T
Sbjct: 236 KCGAIEIAMEVFK--GIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTF 293
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVG--SGLIDMYSKCAPRGMLDCMKVFE 310
VL A + + G+ + M + F+ P + ++D+ S+ G L + E
Sbjct: 294 VGVLCACKHMGLVEDGLAYFNSMF-TDFSIMPEIEHCGCVVDLLSRA---GFL--TQAVE 347
Query: 311 EIS----EPDLVLWNTMI--SGFSQHEDLSEDAL 338
I+ + D V+W T++ S + D+ E AL
Sbjct: 348 FINKMPVKADAVIWATLLGASKVYKKVDIGEVAL 381
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 6/170 (3%)
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
N +V NA+ID K + +A E+F I R D++S+NT+I A G A+ LF
Sbjct: 220 NKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFH 279
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQLHCF--AVLCGYSCYASV--CNAVLARYGG 193
E + +G+ D T GV+ AC+ +GLV + ++ +S + C V+
Sbjct: 280 EMKNSGISPDKVTFVGVLCACKH-MGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSR 338
Query: 194 RGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRM 243
G L++A ++M D + W ++ A ++ V E++++
Sbjct: 339 AGFLTQAVEFINKMPVKA-DAVIWATLLGASKVYKKVDIGEVALEELIKL 387
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 238 bits (608), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/429 (32%), Positives = 231/429 (53%), Gaps = 35/429 (8%)
Query: 217 WNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMI 276
WN +I R ++++ ++ +M+R G+ D T ++ + + L + G H ++
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 135
Query: 277 KSGFNWNPHVGSGLIDMY----SKCAPRGMLDCMK------------------------- 307
KSG W+ + + LI MY + + R + D M
Sbjct: 136 KSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARL 195
Query: 308 VFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGF-RPDDCSFSCVTSACSNL 366
VF+E+SE D+V W++MI G+ + + ++ AL F M R G + ++ + V AC++L
Sbjct: 196 VFDEMSERDVVTWSSMIDGYVKRGEYNK-ALEIFDQMMRMGSSKANEVTMVSVICACAHL 254
Query: 367 SSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVF--DTMPEHNTVSLN 424
+ + GK VH + +P V + +L+ MY+KCG++ DA VF ++ E + + N
Sbjct: 255 GALNRGKTVHRYILDVHLPLT-VILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWN 313
Query: 425 SMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEK 484
++I G A HG ESLQLF M + I P+ ITF+ +L+AC+H G V+E +F +KE
Sbjct: 314 AIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES 373
Query: 485 FGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVK 544
G EP+++H++CMVD+L RAG +++A I MP P ALL C HGN+ELA
Sbjct: 374 -GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAET 432
Query: 545 AANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVH 604
K ++L+PHN YV L+N+YA ++ + +++ M ++GVKK G S + +D H
Sbjct: 433 VGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRH 492
Query: 605 VFVAEDSSH 613
F+A D +H
Sbjct: 493 RFIAHDKTH 501
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 165/368 (44%), Gaps = 46/368 (12%)
Query: 294 YSKCAPRGMLD-CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPD 352
+S + G +D K ++S+P WN +I GFS + E ++ + M R G PD
Sbjct: 49 FSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRN-PEKSISVYIQMLRFGLLPD 107
Query: 353 DCSFSCVTSACSNLSSPSLGKQVHALAIKS------------------------------ 382
++ + + S LS+ LG +H +KS
Sbjct: 108 HMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFD 167
Query: 383 DIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQL 442
++P + N+++ Y+K G++ AR VFD M E + V+ +SMI GY + G ++L++
Sbjct: 168 EMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEI 227
Query: 443 FELMMQ-EDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLL 501
F+ MM+ N +T +SV+ ACAH G + G+ + + + + ++D+
Sbjct: 228 FDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILD-VHLPLTVILQTSLIDMY 286
Query: 502 GRAGKLEEAERIIETMPF-DPGSIEWAALLGACRKHGNVELAVKAANKFLQ--LEPHNAV 558
+ G + +A + + ++ W A++G HG + +++ +K + ++P + +
Sbjct: 287 AKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDP-DEI 345
Query: 559 PYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKE 618
++ L + G +E+ + ++E G + K +D S ++K+
Sbjct: 346 TFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVL--------SRAGLVKD 397
Query: 619 IHEYMGEM 626
H+++ EM
Sbjct: 398 AHDFISEM 405
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 109/244 (44%), Gaps = 3/244 (1%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T+ L+K + G SLH +K+ + ++ N +Y +AR F
Sbjct: 110 TYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEM 169
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+ N+ ++N+I+DA K + AR +FDE+ D+V+++++I + RGE+ A+ +F
Sbjct: 170 PHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFD 229
Query: 138 EAREAGLC-LDGFTLSGVIKACREDVGLV--MQLHCFAVLCGYSCYASVCNAVLARYGGR 194
+ G + T+ VI AC L +H + + + +++ Y
Sbjct: 230 QMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKC 289
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
G + +AW VF+ D + WNA+I +E+L LF +M + D T
Sbjct: 290 GSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLC 349
Query: 255 VLTA 258
+L A
Sbjct: 350 LLAA 353
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 6/132 (4%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T +++ C ++ GK++H + +P + L +Y+KCG++ +A + F
Sbjct: 243 TMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRA 302
Query: 78 N--NPNVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGP 131
+ + +NAII H + + +LF ++ PD +++ L+AA +H G
Sbjct: 303 SVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKE 362
Query: 132 AVRLFKEAREAG 143
A FK +E+G
Sbjct: 363 AWHFFKSLKESG 374
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 237 bits (604), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 165/530 (31%), Positives = 279/530 (52%), Gaps = 18/530 (3%)
Query: 81 NVFSYNAIID--ACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
N+F +A++ AC++ + +A +LFDE+ ++ N L+ GE ++
Sbjct: 146 NMFVRSALVGLYACLRL--VDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLR 203
Query: 139 AREAGLCLDGFTLSGVIKACRED--VGLVMQLHCFAVLCGYSCY-ASVCNAVLARYGGRG 195
G+ +G T +I+ C D V QLH V G++ V N ++ Y G
Sbjct: 204 MELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACG 263
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
LS + R F+ + E +D ISWN+++ C ++L LF +M G + + S
Sbjct: 264 DLSGSMRSFNAVPE--KDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSF 321
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNP-HVGSGLIDMYSKCAPRGMLDCMKVFEEISE 314
L + D+ G Q H ++K GF+ + HV S LIDMY KC G+ + +++ +
Sbjct: 322 LNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKC--NGIENSALLYQSLPC 379
Query: 315 PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSP-SLGK 373
+L N++++ H +++D + F M G D+ + S V A S LS P SL
Sbjct: 380 LNLECCNSLMTSL-MHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALS-LSLPESLHS 437
Query: 374 --QVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYA 431
VH AIKS ++ V+V+ +L+ Y+K G +R+VFD + N L S+I GYA
Sbjct: 438 CTLVHCCAIKSGYAAD-VAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYA 496
Query: 432 QHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEA 491
++G+ + +++ M + +++P+ +T +SVLS C+H+G VEEG+ F+ ++ K+GI P
Sbjct: 497 RNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGR 556
Query: 492 KHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ 551
K ++CMVDLLGRAG +E+AER++ D + W++LL +CR H N + +AA +
Sbjct: 557 KLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMN 616
Query: 552 LEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDN 601
LEP N Y+ +S Y G +E S ++ + R + ++ G S + + N
Sbjct: 617 LEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSVVVKN 666
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 206/431 (47%), Gaps = 14/431 (3%)
Query: 39 HALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPN--VFSYNAIIDACVKHS 96
ALY F+ +T L+ H L T +SF L NP+ V+++N ID +K
Sbjct: 5 QALY---FLRRTTTLAQHLCSLTPFIATPRMDFSSF-LEENPSDLVYTHNRRIDELIKSG 60
Query: 97 HLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIK 156
+L A E FDE+ D+V+YN LI+ ++ G A+ L+ E GL T V+
Sbjct: 61 NLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLS 120
Query: 157 ACREDVGLV--MQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDE 214
C +++ +Q+HC + G+ C V +A++ Y L+ A ++F EM + R+
Sbjct: 121 VCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLD--RNL 178
Query: 215 ISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGR 274
N ++ Q E K ++ M G+ + T ++ + + G Q H
Sbjct: 179 AVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSL 238
Query: 275 MIKSGFNW-NPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDL 333
++KSG+N N V + L+D YS C + M+ F + E D++ WN+++S + + +
Sbjct: 239 VVKSGWNISNIFVANVLVDYYSACGD--LSGSMRSFNAVPEKDVISWNSIVSVCADYGSV 296
Query: 334 SEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNN 393
D+L F MQ G RP F + CS S GKQ+H +K + + V +
Sbjct: 297 L-DSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQS 355
Query: 394 ALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVP 453
AL+ MY KC + ++ ++ ++P N NS++T G+ + +++F LM+ E
Sbjct: 356 ALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGI 415
Query: 454 NNITFISVLSA 464
+ +T +VL A
Sbjct: 416 DEVTLSTVLKA 426
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 168/530 (31%), Positives = 282/530 (53%), Gaps = 28/530 (5%)
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
N V S N ++ + A LFDE+P+ D+ S N+ +++H G + LF +
Sbjct: 15 NVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQ 74
Query: 139 AREAGLCLDGFTLSGVIKACR----EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGR 194
A L T + V+ AC + G Q+H + G A++ Y
Sbjct: 75 IHRASPDLSSHTFTPVLGACSLLSYPETG--RQVHALMIKQGAETGTISKTALIDMYSKY 132
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
G L ++ RVF + E +D +SWNA++ + +GKEAL +F M R ++I FT++S
Sbjct: 133 GHLVDSVRVFESVEE--KDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSS 190
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGML-DCMKVFEEIS 313
V+ L+ L G Q H ++ +G + +G+ +I YS G++ + MKV+ ++
Sbjct: 191 VVKTCASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSV---GLINEAMKVYNSLN 246
Query: 314 -EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLG 372
D V+ N++ISG ++ + E L+ M R RP+ S + CS+ S +G
Sbjct: 247 VHTDEVMLNSLISGCIRNRNYKEAFLL----MSRQ--RPNVRVLSSSLAGCSDNSDLWIG 300
Query: 373 KQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQ 432
KQ+H +A+++ S+ + N L+ MY KCG + AR +F +P + VS SMI YA
Sbjct: 301 KQIHCVALRNGFVSDS-KLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAV 359
Query: 433 HGVEGESLQLFELMMQED--IVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPE 490
+G ++L++F M +E ++PN++TF+ V+SACAH G V+EG++ F MMKEK+ + P
Sbjct: 360 NGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPG 419
Query: 491 AKHFSCMVDLLGRAGKLEEAERIIE-TMPFDPGSIE---WAALLGACRKHGNVELAVKAA 546
+H+ C +D+L +AG+ EE R++E M D SI W A+L AC + ++ A
Sbjct: 420 TEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVA 479
Query: 547 NKFL-QLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCS 595
+ + + P NA YV++SN YA+ G+W+ ++ ++ +G+ K G S
Sbjct: 480 RRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 13/125 (10%)
Query: 23 LKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNV 82
L C D+ GK +H + ++ + L N +Y KCG + ART FR + +V
Sbjct: 288 LAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSV 347
Query: 83 FSYNAIIDACVKHSHLHLARELFDEIPR------PDIVSYNTLIAAHAHRGEHGPAVRLF 136
S+ ++IDA + A E+F E+ P+ V++ +I+A AH G L
Sbjct: 348 VSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAG-------LV 400
Query: 137 KEARE 141
KE +E
Sbjct: 401 KEGKE 405
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 236 bits (602), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 169/566 (29%), Positives = 266/566 (46%), Gaps = 80/566 (14%)
Query: 30 RDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTN-NPNVFSYNAI 88
+ ++ + HA +KT + H T+ ++ +F TN P SY
Sbjct: 50 KSLTEIQQAHAFMLKTGLFHDTFSASKLV--------------AFAATNPEPKTVSY--- 92
Query: 89 IDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDG 148
A + + I P+ ++N++I A+A+ A+ +F+E + D
Sbjct: 93 ------------AHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDK 140
Query: 149 FTLSGVIKACREDVGLV--MQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHE 206
++ + V+KAC G Q+H + G V N ++ YG G A +V
Sbjct: 141 YSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDR 200
Query: 207 MGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLA 266
M RD +SWN+++ A + EA LF EM
Sbjct: 201 MP--VRDAVSWNSLLSAYLEKGLVDEARALFDEM-------------------------- 232
Query: 267 GGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGML-DCMKVFEEISEPDLVLWNTMIS 325
R ++S WN M S A G++ + +VF+ + D+V WN M++
Sbjct: 233 -----EERNVES---WNF--------MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVT 276
Query: 326 GFSQHEDLSEDALICFQDM-QRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDI 384
++ H + L F M + +PD + V SAC++L S S G+ VH K I
Sbjct: 277 AYA-HVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGI 335
Query: 385 PSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFE 444
+ ALV MYSKCG + A VF + + + NS+I+ + HG+ ++L++F
Sbjct: 336 EIEGF-LATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFS 394
Query: 445 LMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRA 504
M+ E PN ITFI VLSAC H G +++ +K F MM + +EP +H+ CMVDLLGR
Sbjct: 395 EMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRM 454
Query: 505 GKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLS 564
GK+EEAE ++ +P D SI +LLGAC++ G +E A + AN+ L+L ++ Y +S
Sbjct: 455 GKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMS 514
Query: 565 NMYASAGRWEESATVKRLMRERGVKK 590
N+YAS GRWE+ +R MR V +
Sbjct: 515 NLYASDGRWEKVIDGRRNMRAERVNR 540
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 121/276 (43%), Gaps = 38/276 (13%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKC------------- 64
+FT +LK C + G+ +H L+IK+ + ++ N +Y +
Sbjct: 142 SFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRM 201
Query: 65 ------------------GTLDNARTSFRLTNNPNVFSYNAIIDACVKHSHLHLARELFD 106
G +D AR F NV S+N +I + A+E+FD
Sbjct: 202 PVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFD 261
Query: 107 EIPRPDIVSYNTLIAAHAHRGEHGPAVRLF-KEAREAGLCLDGFTLSGVIKACREDVGLV 165
+P D+VS+N ++ A+AH G + + +F K ++ DGFTL V+ AC +G +
Sbjct: 262 SMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSAC-ASLGSL 320
Query: 166 MQ---LHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIV 222
Q +H + G + A++ Y G + +A VF + RD +WN++I
Sbjct: 321 SQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSK--RDVSTWNSIIS 378
Query: 223 ACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTA 258
GK+AL +F EMV G K + T VL+A
Sbjct: 379 DLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSA 414
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 109/241 (45%), Gaps = 18/241 (7%)
Query: 361 SACSNLSSPSLG-----------KQVHALAIKSDIPSNRVSVNN--ALVAMYSKCGNLHD 407
S CS+ P L +Q HA +K+ + + S + A A + +
Sbjct: 33 SVCSSTPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSY 92
Query: 408 ARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAH 467
A + + + N + NS+I YA +L +F M+ + P+ +F VL ACA
Sbjct: 93 AHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAA 152
Query: 468 TGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWA 527
EEG++ + K G+ + + +V++ GR+G E A ++++ MP ++ W
Sbjct: 153 FCGFEEGRQIHGLFI-KSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR-DAVSWN 210
Query: 528 ALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERG 587
+LL A + G V+ +A F ++E N + + + YA+AG +E+ V M R
Sbjct: 211 SLLSAYLEKGLVD---EARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRD 267
Query: 588 V 588
V
Sbjct: 268 V 268
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T ++L C S +S G+ +H K I +L+ +YSKCG +D A FR T
Sbjct: 306 TLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRAT 365
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIP----RPDIVSYNTLIAAHAHRGEHGPAV 133
+ +V ++N+II H A E+F E+ +P+ +++ +++A H G A
Sbjct: 366 SKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQAR 425
Query: 134 RLFK 137
+LF+
Sbjct: 426 KLFE 429
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 235 bits (600), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 136/422 (32%), Positives = 212/422 (50%), Gaps = 36/422 (8%)
Query: 208 GEGCRDEISWNAMIVACGQCREGKEALVLFGEM-VRMGMKIDMFTMASVLTAFTCLEDLA 266
C IS + + ++AL LF +M + +D + L +
Sbjct: 6 ASSCTKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPV 65
Query: 267 GGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMIS- 325
G H +KS F NP VG L+DMY KC + K+F+EI + + V+WN MIS
Sbjct: 66 LGGSVHAHSVKSNFLSNPFVGCALLDMYGKCL--SVSHARKLFDEIPQRNAVVWNAMISH 123
Query: 326 -------------------------------GFSQHEDLSEDALICFQDMQRAGFRPDDC 354
G ED S A+ ++ M F+P+
Sbjct: 124 YTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLI 183
Query: 355 SFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDT 414
+ + SACS + + L K++H+ A ++ I + + + LV Y +CG++ + VFD+
Sbjct: 184 TLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHP-QLKSGLVEAYGRCGSIVYVQLVFDS 242
Query: 415 MPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEG 474
M + + V+ +S+I+ YA HG +L+ F+ M + P++I F++VL AC+H G +E
Sbjct: 243 MEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEA 302
Query: 475 QKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACR 534
YF M+ +G+ H+SC+VD+L R G+ EEA ++I+ MP P + W ALLGACR
Sbjct: 303 LVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACR 362
Query: 535 KHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGC 594
+G +ELA AA + L +EP N YV+L +Y S GR EE+ ++ M+E GVK PG
Sbjct: 363 NYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGS 422
Query: 595 SW 596
SW
Sbjct: 423 SW 424
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 109/252 (43%), Gaps = 20/252 (7%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFT-----LLYSKCGTLDNART 72
F+ LK C + G S+HA +K S +LSN F +Y KC ++ +AR
Sbjct: 50 VFSLALKSCAAAFRPVLGGSVHAHSVK-----SNFLSNPFVGCALLDMYGKCLSVSHARK 104
Query: 73 SFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIP-RPDIVSYNTLIAAHAHRGEHGP 131
F N +NA+I + A EL++ + P+ S+N +I E G
Sbjct: 105 LFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGT-EDGS 163
Query: 132 --AVRLFKEAREAGLCLDGFTLSGVIKACREDVG---LVMQLHCFAVLCGYSCYASVCNA 186
A+ +++ E + TL ++ AC +G L+ ++H +A + + +
Sbjct: 164 YRAIEFYRKMIEFRFKPNLITLLALVSACSA-IGAFRLIKEIHSYAFRNLIEPHPQLKSG 222
Query: 187 VLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMK 246
++ YG G + VF M + RD ++W+++I A + + AL F EM +
Sbjct: 223 LVEAYGRCGSIVYVQLVFDSMED--RDVVAWSSLISAYALHGDAESALKTFQEMELAKVT 280
Query: 247 IDMFTMASVLTA 258
D +VL A
Sbjct: 281 PDDIAFLNVLKA 292
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 159/522 (30%), Positives = 272/522 (52%), Gaps = 19/522 (3%)
Query: 86 NAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLC 145
N++I K S + R++FDE+ D VSY ++I + G A++L KE G
Sbjct: 86 NSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFI 145
Query: 146 LDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASV--CNAVLARYGGRGLLSEAW 201
++ ++ C V ++ VL SV A++ Y + A+
Sbjct: 146 PKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAF 205
Query: 202 RVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTC 261
VF +M ++E+SW AMI C + + + LF M R ++ + T+ SVL A C
Sbjct: 206 HVFDQME--VKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPA--C 261
Query: 262 LEDLAGG---MQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEP-DL 317
+E G + HG + G + + + + + MY +C G + +V E S+ D+
Sbjct: 262 VELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRC---GNVSLSRVLFETSKVRDV 318
Query: 318 VLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHA 377
V+W++MISG+++ D SE + M++ G + + + SAC+N + S VH+
Sbjct: 319 VMWSSMISGYAETGDCSE-VMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHS 377
Query: 378 LAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEG 437
+K S+ + + NAL+ MY+KCG+L AR VF + E + VS +SMI Y HG
Sbjct: 378 QILKCGFMSH-ILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGS 436
Query: 438 ESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCM 497
E+L++F+ M++ +++ F+++LSAC H G VEE Q F K+ + +H++C
Sbjct: 437 EALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAG-KYHMPVTLEHYACY 495
Query: 498 VDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVK-AANKFLQLEPHN 556
++LLGR GK+++A + MP P + W++LL AC HG +++A K AN+ ++ EP N
Sbjct: 496 INLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDN 555
Query: 557 AVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQ 598
YV+LS ++ +G + + V+R+M+ R + K G S I+
Sbjct: 556 PANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 199/420 (47%), Gaps = 21/420 (5%)
Query: 129 HGPAVRLFKEAREAGLCLDGFT--LSGVIKAC---REDVGLVMQLHCFAVLCGYSCYASV 183
+ A+RL+K + L +GFT L VIKAC +E L QLHC + G C V
Sbjct: 26 YDEALRLYK-LKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVV 84
Query: 184 CNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREG--KEALVLFGEMV 241
N++++ Y +VF EM RD +S+ ++I +C C++G EA+ L EM
Sbjct: 85 SNSLISMYAKFSRKYAVRKVFDEMLH--RDTVSYCSIINSC--CQDGLLYEAMKLIKEMY 140
Query: 242 RMGMKIDMFTMASVLTAFTCLEDLAG-GMQFHGR-MIKSGFNWNPHVGSGLIDMYSKCAP 299
G +AS+L T + + FH ++ + + + L+DMY K
Sbjct: 141 FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDD 200
Query: 300 RGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCV 359
VF+++ + V W MISG +++ E + F+ MQR RP+ + V
Sbjct: 201 HAA--AFHVFDQMEVKNEVSWTAMISGCVANQNY-EMGVDLFRAMQRENLRPNRVTLLSV 257
Query: 360 TSACSNLS-SPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH 418
AC L+ SL K++H + + ++ + A + MY +CGN+ +R +F+T
Sbjct: 258 LPACVELNYGSSLVKEIHGFSFRHGCHADE-RLTAAFMTMYCRCGNVSLSRVLFETSKVR 316
Query: 419 NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYF 478
+ V +SMI+GYA+ G E + L M +E I N++T ++++SAC ++ +
Sbjct: 317 DVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVH 376
Query: 479 NMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGN 538
+ + K G + ++D+ + G L A + + + + W++++ A HG+
Sbjct: 377 SQIL-KCGFMSHILLGNALIDMYAKCGSLSAAREVFYELT-EKDLVSWSSMINAYGLHGH 434
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 198/437 (45%), Gaps = 19/437 (4%)
Query: 36 KSLHALYIKTFIPHSTYLSNHFTLLY-----SKCGTLDNARTSFRLTNNPNVFSYNAIID 90
K + +Y FIP S +++ L SK + +A +V A++D
Sbjct: 134 KLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVD 193
Query: 91 ACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFT 150
+K A +FD++ + VS+ +I+ + V LF+ + L + T
Sbjct: 194 MYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVT 253
Query: 151 LSGVIKACRE---DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEM 207
L V+ AC E LV ++H F+ G + A + Y G +S + RV E
Sbjct: 254 LLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLS-RVLFET 312
Query: 208 GEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAG 267
+ RD + W++MI + + E + L +M + G++ + T+ ++++A T L+
Sbjct: 313 SK-VRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSF 371
Query: 268 GMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGF 327
H +++K GF + +G+ LIDMY+KC + +VF E++E DLV W++MI+ +
Sbjct: 372 ASTVHSQILKCGFMSHILLGNALIDMYAKCG--SLSAAREVFYELTEKDLVSWSSMINAY 429
Query: 328 SQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSN 387
H SE AL F+ M + G DD +F + SAC++ + + A K +P
Sbjct: 430 GLHGHGSE-ALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVT 488
Query: 388 RVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSL-NSMITGYAQHG---VEGESLQLF 443
+ + + + G + DA V MP + + +S+++ HG V G+ +
Sbjct: 489 -LEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIA-N 546
Query: 444 ELMMQEDIVPNNITFIS 460
ELM E P N +S
Sbjct: 547 ELMKSEPDNPANYVLLS 563
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 11/205 (5%)
Query: 359 VTSACSNLSSPSL-GKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPE 417
V AC+ P L G Q+H L +K+ + V V+N+L++MY+K + R+VFD M
Sbjct: 52 VIKACAFQQEPFLLGAQLHCLCLKAGADCDTV-VSNSLISMYAKFSRKYAVRKVFDEMLH 110
Query: 418 HNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKY 477
+TVS S+I Q G+ E+++L + M +P + S+L+ C G + +
Sbjct: 111 RDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARM 170
Query: 478 FN---MMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACR 534
F+ ++ E+ ++ + +VD+ + A + + M + W A++ C
Sbjct: 171 FHALVLVDER--MQESVLLSTALVDMYLKFDDHAAAFHVFDQMEV-KNEVSWTAMISGCV 227
Query: 535 KHGNVELAVKAANKFLQLEPHNAVP 559
+ N E+ V + F ++ N P
Sbjct: 228 ANQNYEMGV---DLFRAMQRENLRP 249
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 130/368 (35%), Positives = 209/368 (56%), Gaps = 19/368 (5%)
Query: 268 GMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD-CMKVFEEISEP-DLVLWNTMIS 325
G Q H + K GFN + + L+ YS G +D +VF+E E ++VLW MIS
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSV---GDVDYARQVFDETPEKQNIVLWTAMIS 140
Query: 326 GFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIP 385
++++E+ S +A+ F+ M+ D + SAC++L + +G+++++ +IK
Sbjct: 141 AYTENEN-SVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRR 199
Query: 386 -SNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFE 444
+ +++ N+L+ MY K G AR++FD + + SMI GYA +G ESL+LF+
Sbjct: 200 LAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFK 259
Query: 445 LMMQED------IVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMV 498
M D I PN++TFI VL AC+H+G VEEG+++F M + ++P HF CMV
Sbjct: 260 KMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMV 319
Query: 499 DLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAV 558
DL R+G L++A I MP P ++ W LLGAC HGNVEL + + +L+ +
Sbjct: 320 DLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVG 379
Query: 559 PYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVA---EDSSHPM 615
YV LSN+YAS G W+E + ++ +R+R + PG SWI++ + ++ FV+ + M
Sbjct: 380 DYVALSNIYASKGMWDEKSKMRDRVRKR---RMPGKSWIELGSIINEFVSGPDNNDEQLM 436
Query: 616 IKEIHEYM 623
+ EI E +
Sbjct: 437 MGEISEVL 444
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 152/346 (43%), Gaps = 21/346 (6%)
Query: 117 NTLIAAHAHRGEHGPAVRLFKEA-REAGLCLDGFTLSGVIKACREDVGLVM---QLHCFA 172
N + + GE A+ F+ R++ +D F++ IK + Q+H
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALV 91
Query: 173 VLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKE 232
G++ + +++ Y G + A +VF E E ++ + W AMI A + E
Sbjct: 92 RKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEK-QNIVLWTAMISAYTENENSVE 150
Query: 233 ALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSG--FNWNPHVGSGL 290
A+ LF M +++D + L+A L + G + + R IK + + + L
Sbjct: 151 AIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSL 210
Query: 291 IDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDM------ 344
++MY K K+F+E D+ + +MI G++ + ++++L F+ M
Sbjct: 211 LNMYVKSGETE--KARKLFDESMRKDVTTYTSMIFGYALNGQ-AQESLELFKKMKTIDQS 267
Query: 345 QRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGN 404
Q P+D +F V ACS+ GK+ I R + +V ++ + G+
Sbjct: 268 QDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGH 327
Query: 405 LHDARRVFDTMP-EHNTVSLNSMITGYAQHG-VE-GESLQ--LFEL 445
L DA + MP + NTV +++ + HG VE GE +Q +FEL
Sbjct: 328 LKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFEL 373
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 37/253 (14%)
Query: 101 ARELFDEIP-RPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACR 159
AR++FDE P + +IV + +I+A+ A+ LFK + LDG ++ + AC
Sbjct: 119 ARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSAC- 177
Query: 160 EDVGLVMQLHCFAVLCGYSCYA-------------SVCNAVLARYGGRGLLSEAWRVFHE 206
D+G AV G Y+ ++ N++L Y G +A ++F E
Sbjct: 178 ADLG--------AVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDE 229
Query: 207 MGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCL---- 262
+D ++ +MI + +E+L LF +M + D + +T L
Sbjct: 230 SMR--KDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACS 287
Query: 263 -EDLAGGMQFHGRMIKSGFNWNP---HVGSGLIDMYSKCAPRGMLDCMKVFEEIS-EPDL 317
L + H + + +N P H G ++D++ C + D + ++ +P+
Sbjct: 288 HSGLVEEGKRHFKSMIMDYNLKPREAHFGC-MVDLF--CRSGHLKDAHEFINQMPIKPNT 344
Query: 318 VLWNTMISGFSQH 330
V+W T++ S H
Sbjct: 345 VIWRTLLGACSLH 357
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/382 (34%), Positives = 206/382 (53%), Gaps = 33/382 (8%)
Query: 348 GFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHD 407
G PD F + +C+NL S K+VH ++S + +NN +++M+ +C ++ D
Sbjct: 231 GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGD-PKLNNMVISMFGECSSITD 289
Query: 408 ARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAH 467
A+RVFD M + + S + M+ Y+ +G+ ++L LFE M + + PN TF++V ACA
Sbjct: 290 AKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACAT 349
Query: 468 TGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWA 527
G +EE +F+ MK + GI P+ +H+ ++ +LG+ G L EAE+ I +PF+P + W
Sbjct: 350 VGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWE 409
Query: 528 ALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERG 587
A+ R HG+++L + ++P AV + + S + R++ R
Sbjct: 410 AMRNYARLHGDIDLEDYMEELMVDVDPSKAVINKIPTPPPKSFKETNMVTSKSRILEFRN 469
Query: 588 VKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDE 647
+ F +++ EM K K YVPD R+ L
Sbjct: 470 L----------------TFYKDEAK------------EMAAK-KGVVYVPDTRFVL---H 497
Query: 648 DVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREI 707
D+ E KE+ LLYHSE+LA+A+G+I T + ++KNLR+CGDCHN IK++S I GR +
Sbjct: 498 DIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVL 557
Query: 708 TVRDAHRFHCFKEGHCSCKDYW 729
VRD RFH FK+G CSC DYW
Sbjct: 558 IVRDNKRFHHFKDGKCSCGDYW 579
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 99/217 (45%), Gaps = 12/217 (5%)
Query: 239 EMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCA 298
E++ G D + + L+ L + H ++S F +P + + +I M+ +C+
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 299 PRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSC 358
+ D +VF+ + + D+ W+ M+ +S + + +DAL F++M + G +P++ +F
Sbjct: 286 --SITDAKRVFDHMVDKDMDSWHLMMCAYSDN-GMGDDALHLFEEMTKHGLKPNEETFLT 342
Query: 359 VTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNN----ALVAMYSKCGNLHDARRVFDT 414
V AC+ + G + L S + +S ++ + KCG+L +A +
Sbjct: 343 VFLACATVG----GIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRD 398
Query: 415 MPEHNTVSLNSMITGYAQ-HGVEGESLQLFELMMQED 450
+P T + YA+ HG + ELM+ D
Sbjct: 399 LPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVD 435
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 262/522 (50%), Gaps = 61/522 (11%)
Query: 117 NTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACR---EDVGLVMQLHCFAV 173
+ LI H RG A+ L+ R G+ G+ + +++AC V L LH ++
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGW-VPLILRACACVVPRVVLGKLLHSESI 73
Query: 174 LCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEA 233
G V +++++ YG G + A +VF EM E R+ +WNAMI G +A
Sbjct: 74 KFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPE--RNVATWNAMI---GGYMSNGDA 128
Query: 234 LVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRM---IKSGFNWNPHVGSGL 290
++ G + + + T ++ + ++ + RM +K+ W+ +G +
Sbjct: 129 VLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYV 188
Query: 291 IDMYSKCAPRGMLDCMKVFEEISEP-------------------------------DLVL 319
+ R M D K FE+I E DLV+
Sbjct: 189 NN-------RKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVI 241
Query: 320 WNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALA 379
WNT+I+G++Q+ S+DA+ F +MQ G+ PD + S + SAC+ +G++VH+L
Sbjct: 242 WNTLIAGYAQN-GYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLI 300
Query: 380 IKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGES 439
I N+ V+NAL+ MY+KCG+L +A VF+++ + NSMI+ A HG E+
Sbjct: 301 NHRGIELNQF-VSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEA 359
Query: 440 LQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVD 499
L++F M D+ P+ ITFI+VL+AC H G + EG K F+ MK + ++P KHF C++
Sbjct: 360 LEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIH 418
Query: 500 LLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELA------VKAANKFLQLE 553
LLGR+GKL+EA R+++ M P ALLGAC+ H + E+A ++ A
Sbjct: 419 LLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSY 478
Query: 554 PHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCS 595
N + + SN+YA RW+ + ++ M +RG++K PG S
Sbjct: 479 SENHLASI--SNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 206/475 (43%), Gaps = 31/475 (6%)
Query: 26 CISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSY 85
C+ R + GK LH+ IK + + + +Y KCG + +AR F NV ++
Sbjct: 57 CVVPR-VVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATW 115
Query: 86 NAIIDACVKHSHLHLARELFDEIPR-PDIVSYNTLIAAHAHRGEHGPAVRLF-------K 137
NA+I + + LA LF+EI + V++ +I + R E A LF K
Sbjct: 116 NAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELK 175
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLL 197
+ + L + + ++ R+ + + + F V + +++ Y G +
Sbjct: 176 NVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAF-----------VWSLMMSGYFRIGDV 224
Query: 198 SEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLT 257
EA +F+ + RD + WN +I Q +A+ F M G + D T++S+L+
Sbjct: 225 HEARAIFYRV--FARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILS 282
Query: 258 AFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDL 317
A L G + H + G N V + LIDMY+KC + + VFE IS +
Sbjct: 283 ACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGD--LENATSVFESISVRSV 340
Query: 318 VLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHA 377
N+MIS + H ++AL F M+ +PD+ +F V +AC + G ++ +
Sbjct: 341 ACCNSMISCLAIHGK-GKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFS 399
Query: 378 LAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTM-PEHNTVSLNSMITGYAQHGVE 436
D+ N V L+ + + G L +A R+ M + N L +++ H
Sbjct: 400 EMKTQDVKPN-VKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDT 458
Query: 437 GESLQLFELMMQEDIVPNNIT---FISVLSACAHTGKVEEGQKYFNMMKEKFGIE 488
+ Q+ +++ + N+ + S+ + AHT + + + + EK G+E
Sbjct: 459 EMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEA-LRVEMEKRGLE 512
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T +++L C + G+ +H+L I + ++SN +Y+KCG L+NA + F
Sbjct: 276 TVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESI 335
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIP----RPDIVSYNTLIAAHAHRGEHGPAV 133
+ +V N++I H A E+F + +PD +++ ++ A H G +
Sbjct: 336 SVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGL 395
Query: 134 RLFKEAR 140
++F E +
Sbjct: 396 KIFSEMK 402
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 226 bits (575), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 134/387 (34%), Positives = 211/387 (54%), Gaps = 6/387 (1%)
Query: 212 RDEISWNAMIVACGQCREGKEALVLFGEMVRMG-MKIDMFTMASVLTAFTCLEDLAGGMQ 270
R+ SWN +I + +++ LF M R ++ D FT+ +L A + + G
Sbjct: 96 RNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDL 155
Query: 271 FHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQH 330
H +K GF+ + V S L+ MY +L K+F+++ D VL+ M G+ Q
Sbjct: 156 IHVLCLKLGFSSSLFVSSALVIMYVDMGK--LLHARKLFDDMPVRDSVLYTAMFGGYVQQ 213
Query: 331 EDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVS 390
+ + L F++M +GF D + AC L + GK VH I+ ++
Sbjct: 214 GE-AMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRR-CSCLGLN 271
Query: 391 VNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQED 450
+ NA+ MY KC L A VF M + +S +S+I GY G S +LF+ M++E
Sbjct: 272 LGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEG 331
Query: 451 IVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEA 510
I PN +TF+ VLSACAH G VE+ YF +M+E + I PE KH++ + D + RAG LEEA
Sbjct: 332 IEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQE-YNIVPELKHYASVADCMSRAGLLEEA 390
Query: 511 ERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASA 570
E+ +E MP P A+L C+ +GNVE+ + A + +QL+P A YV L+ +Y++A
Sbjct: 391 EKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAA 450
Query: 571 GRWEESATVKRLMRERGVKKKPGCSWI 597
GR++E+ ++++ M+E+ + K PGCS I
Sbjct: 451 GRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 118/487 (24%), Positives = 201/487 (41%), Gaps = 91/487 (18%)
Query: 42 YIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAIIDACVKHSHLHLA 101
++TF+ + LS+ L YSK L S
Sbjct: 57 LLRTFLYSNVVLSSKLVLAYSKLNHLFPTSLS---------------------------- 88
Query: 102 RELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLF-KEAREAGLCLDGFTLSGVIKAC-- 158
+F +P +I S+N +I + G ++ LF + RE+ + D FTL +++AC
Sbjct: 89 --VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSA 146
Query: 159 -RE-DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEIS 216
RE G ++ + C + G+S V +A++ Y G L A ++F +M RD +
Sbjct: 147 SREAKSGDLIHVLCLKL--GFSSSLFVSSALVIMYVDMGKLLHARKLFDDM--PVRDSVL 202
Query: 217 WNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMI 276
+ AM Q E L +F EM G +D M S+L A L L G HG I
Sbjct: 203 YTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCI 262
Query: 277 KSGFNWNPHVGSGLIDMYSKCAPRGMLD-CMKVFEEISEPDLVLWNTMISGFSQHEDLSE 335
+ ++G+ + DMY KC+ +LD VF +S D++ W+++I G+ D+
Sbjct: 263 RRCSCLGLNLGNAITDMYVKCS---ILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVM 319
Query: 336 DALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNAL 395
+ F +M + G P+ +F V SAC++
Sbjct: 320 -SFKLFDEMLKEGIEPNAVTFLGVLSACAH------------------------------ 348
Query: 396 VAMYSKCGNLHDARRVFDTMPEHNTVS----LNSMITGYAQHGVEGESLQLFELMMQEDI 451
G + + F M E+N V S+ ++ G+ E+ + E M +
Sbjct: 349 ------GGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDM---PV 399
Query: 452 VPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEP-EAKHFSCMVDLLGRAGKLEEA 510
P+ +VLS C G VE G++ + +E ++P +A ++ + L AG+ +EA
Sbjct: 400 KPDEAVMGAVLSGCKVYGNVEVGER---VARELIQLKPRKASYYVTLAGLYSAAGRFDEA 456
Query: 511 ERIIETM 517
E + + M
Sbjct: 457 ESLRQWM 463
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 132/288 (45%), Gaps = 12/288 (4%)
Query: 306 MKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSN 365
+ VF + ++ WN +I FS+ S+ + + + + RPDD + + ACS
Sbjct: 87 LSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSA 146
Query: 366 LSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNS 425
G +H L +K S+ + V++ALV MY G L AR++FD MP ++V +
Sbjct: 147 SREAKSGDLIHVLCLKLGFSSS-LFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTA 205
Query: 426 MITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEK- 484
M GY Q G L +F M +++ +S+L AC G ++ G+ +
Sbjct: 206 MFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRC 265
Query: 485 --FGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELA 542
G+ + + D+ + L+ A + M I W++L+ G+V ++
Sbjct: 266 SCLGLNLG----NAITDMYVKCSILDYAHTVFVNMS-RRDVISWSSLILGYGLDGDVVMS 320
Query: 543 VKAANKFLQ--LEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGV 588
K ++ L+ +EP NAV ++ + + A G E+S RLM+E +
Sbjct: 321 FKLFDEMLKEGIEP-NAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNI 367
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 158/407 (38%), Gaps = 84/407 (20%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T +L+ C + R+ +G +H L +K S ++S+ ++Y G L
Sbjct: 136 TLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKL---------- 185
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
LH AR+LFD++P D V Y + + +GE + +F+
Sbjct: 186 --------------------LH-ARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFR 224
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCY---ASVCNAVLARYGGR 194
E +G LD + ++ AC + +G + C C ++ NA+ Y
Sbjct: 225 EMGYSGFALDSVVMVSLLMACGQ-LGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKC 283
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
+L A VF M RD ISW+++I+ G + + LF EM++ G++ + T
Sbjct: 284 SILDYAHTVFVNMSR--RDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLG 341
Query: 255 VLTAFTCLEDLAGGM----QFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFE 310
VL+A C GG+ + R+++ +N P + Y+ A DCM
Sbjct: 342 VLSA--CAH---GGLVEKSWLYFRLMQE-YNIVPE-----LKHYASVA-----DCM---- 381
Query: 311 EISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPS 370
L E+A +DM +PD+ V S C +
Sbjct: 382 ------------------SRAGLLEEAEKFLEDMP---VKPDEAVMGAVLSGCKVYGNVE 420
Query: 371 LGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPE 417
+G++V I+ + + S L +YS G +A + M E
Sbjct: 421 VGERVARELIQ--LKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKE 465
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 223 bits (568), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 131/386 (33%), Positives = 206/386 (53%), Gaps = 23/386 (5%)
Query: 223 ACGQCREGKEALV--LFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGF 280
AC + G LV L + +R G+ D+FT+ +++ ++ + + +Q F
Sbjct: 124 ACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQL--------F 175
Query: 281 NWNPH----VGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSED 336
+ NP + LID K R ++ ++F+ + DLV WN++ISG++Q E
Sbjct: 176 DENPQRDVVTYNVLIDGLVKA--REIVRARELFDSMPLRDLVSWNSLISGYAQMNHCRE- 232
Query: 337 ALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALV 396
A+ F +M G +PD+ + SAC+ GK +H + + + + LV
Sbjct: 233 AIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSF-LATGLV 291
Query: 397 AMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNI 456
Y+KCG + A +F+ + + N+MITG A HG ++ F M+ I P+ +
Sbjct: 292 DFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGV 351
Query: 457 TFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIET 516
TFISVL C+H+G V+E + F+ M+ + + E KH+ CM DLLGRAG +EEA +IE
Sbjct: 352 TFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQ 411
Query: 517 MPFDPGSIE----WAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGR 572
MP D G+ E W+ LLG CR HGN+E+A KAAN+ L P + Y ++ MYA+A R
Sbjct: 412 MPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAER 471
Query: 573 WEESATVKRLM-RERGVKKKPGCSWI 597
WEE V+ ++ R++ VKK G S +
Sbjct: 472 WEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 191/468 (40%), Gaps = 66/468 (14%)
Query: 70 ARTSFRLTNNPNVFSYNAIIDACVKHSHLHLA-RELFDEIPR----PDIVSYNTLIAAHA 124
A + FR NP+ F +N II C H L+ + F E+ R PD ++ + A A
Sbjct: 67 ATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACA 126
Query: 125 HR--GEHGPAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYAS 182
+ G+ L +A GL D FTL+ +I+ L+ + L +
Sbjct: 127 AKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRV----YSLIAPIDSALQLFDENPQRD 182
Query: 183 VC--NAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEM 240
V N ++ + A +F M RD +SWN++I Q +EA+ LF EM
Sbjct: 183 VVTYNVLIDGLVKAREIVRARELFDSMP--LRDLVSWNSLISGYAQMNHCREAIKLFDEM 240
Query: 241 VRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPR 300
V +G+K D + S L+A D G H + + + +GL+D Y+KC
Sbjct: 241 VALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKC--- 297
Query: 301 GMLD-CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCV 359
G +D M++FE S+ L WN MI+G + H + E + F+ M +G +PD +F V
Sbjct: 298 GFIDTAMEIFELCSDKTLFTWNAMITGLAMHGN-GELTVDYFRKMVSSGIKPDGVTFISV 356
Query: 360 TSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHN 419
CS+ G + +AR +FD M
Sbjct: 357 LVGCSH------------------------------------SGLVDEARNLFDQMRSLY 380
Query: 420 TVS-----LNSMITGYAQHGVEGESLQLFELMMQEDIVPNN-ITFISVLSACAHTGKVEE 473
V+ M + G+ E+ ++ E M ++ + + +L C G +E
Sbjct: 381 DVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEI 440
Query: 474 GQKYFNMMKEKFGIEPE-AKHFSCMVDLLGRAGKLEEAERIIETMPFD 520
+K N +K + PE + MV++ A + EE ++ E + D
Sbjct: 441 AEKAANRVK---ALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRD 485
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 142/323 (43%), Gaps = 44/323 (13%)
Query: 270 QFHGRMIKSG-----FNWNPHVGSGLIDMYS----KCAPRGMLD-CMKVFEEISEPDLVL 319
QFH + I SG F N + L + S A + ++ VF I+ P
Sbjct: 22 QFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSVFRFITNPSTFC 81
Query: 320 WNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSP--SLGKQVHA 377
+NT+I + HE S + F +M+R PD +F V AC+ + +L K +H
Sbjct: 82 FNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHC 141
Query: 378 LAIK----SDI--------------------------PSNRVSVNNALVAMYSKCGNLHD 407
A++ SD+ P V N L+ K +
Sbjct: 142 QALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVR 201
Query: 408 ARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAH 467
AR +FD+MP + VS NS+I+GYAQ E+++LF+ M+ + P+N+ +S LSACA
Sbjct: 202 ARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQ 261
Query: 468 TGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWA 527
+G ++G+ + K K + ++ + +VD + G ++ A I E + D W
Sbjct: 262 SGDWQKGKAIHDYTKRK-RLFIDSFLATGLVDFYAKCGFIDTAMEIFE-LCSDKTLFTWN 319
Query: 528 ALLGACRKHGNVELAVKAANKFL 550
A++ HGN EL V K +
Sbjct: 320 AMITGLAMHGNGELTVDYFRKMV 342
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 112/247 (45%), Gaps = 10/247 (4%)
Query: 18 TFTNLLKQCISQR--DISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFR 75
TF + K C +++ D++ K+LH ++ + + N +YS +D+A F
Sbjct: 117 TFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFD 176
Query: 76 LTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRL 135
+V +YN +ID VK + ARELFD +P D+VS+N+LI+ +A A++L
Sbjct: 177 ENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKL 236
Query: 136 FKEAREAGLCLDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGG 193
F E GL D + + AC + D +H + + + ++ Y
Sbjct: 237 FDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAK 296
Query: 194 RGLLSEAWRVFHEMGEGCRDE--ISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFT 251
G + A +F E C D+ +WNAMI G+ + F +MV G+K D T
Sbjct: 297 CGFIDTAMEIF----ELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVT 352
Query: 252 MASVLTA 258
SVL
Sbjct: 353 FISVLVG 359
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 152/521 (29%), Positives = 255/521 (48%), Gaps = 70/521 (13%)
Query: 98 LHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIK- 156
L A ++FDE+P PD++S+N+L++ + G + LF E + + + F+ + +
Sbjct: 106 LEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAA 165
Query: 157 ----------ACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHE 206
AC + + L V+ G N ++ YG G + +A VF
Sbjct: 166 CARLHLSPLGACIHSKLVKLGLEKGNVVVG--------NCLIDMYGKCGFMDDAVLVFQH 217
Query: 207 MGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLA 266
M E +D +SWNA++ +C + + + L F +M D T ++ AF
Sbjct: 218 MEE--KDTVSWNAIVASCSRNGKLELGLWFFHQMP----NPDTVTYNELIDAF------- 264
Query: 267 GGMQFHGRMIKSG-FNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMIS 325
+KSG FN + +V ++ P+ WNT+++
Sbjct: 265 ---------VKSGDFN----------------------NAFQVLSDMPNPNSSSWNTILT 293
Query: 326 GFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIP 385
G+ E S +A F M +G R D+ S S V +A + L+ G +HA A K +
Sbjct: 294 GYVNSEK-SGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLD 352
Query: 386 SNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFEL 445
S RV V +AL+ MYSKCG L A +F TMP N + N MI+GYA++G E+++LF
Sbjct: 353 S-RVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQ 411
Query: 446 MMQEDIV-PNNITFISVLSACAHTG-KVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGR 503
+ QE + P+ TF+++L+ C+H +E YF MM ++ I+P +H ++ +G+
Sbjct: 412 LKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQ 471
Query: 504 AGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQL--EPHNAVPYV 561
G++ +A+++I+ F + W ALLGAC +++ A A K ++L + Y+
Sbjct: 472 RGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYI 531
Query: 562 MLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNK 602
++SN+YA RW E ++++MRE GV K+ G SWI K
Sbjct: 532 VMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWIDSRTK 572
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 145/343 (42%), Gaps = 65/343 (18%)
Query: 270 QFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQ 329
Q HG + K GF N + + L+ Y + D KVF+E+ +PD++ WN+++SG+ Q
Sbjct: 76 QLHGYVTKHGFVSNTRLSNSLMRFYK--TSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQ 133
Query: 330 HEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRV 389
E + F ++ R+ P++ SF+ +AC+ L LG +H+ +K + V
Sbjct: 134 SGRFQE-GICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNV 192
Query: 390 SVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQE 449
V N L+ MY KCG + DA VF M E +TVS N+++ +++G L F M
Sbjct: 193 VVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNP 252
Query: 450 DIV---------------------------PNNITFISVLSACAHTGKVEEGQKYFNMM- 481
D V PN+ ++ ++L+ ++ K E ++F M
Sbjct: 253 DTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMH 312
Query: 482 ---------------------------------KEKFGIEPEAKHFSCMVDLLGRAGKLE 508
K G++ S ++D+ + G L+
Sbjct: 313 SSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLK 372
Query: 509 EAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ 551
AE + TMP I W ++ ++G+ A+K N+ Q
Sbjct: 373 HAELMFWTMP-RKNLIVWNEMISGYARNGDSIEAIKLFNQLKQ 414
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 159/374 (42%), Gaps = 42/374 (11%)
Query: 32 ISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAIIDA 91
+S + LH K +T LSN Y +L++A F +P+V S+N+++
Sbjct: 71 VSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSG 130
Query: 92 CVKHSHLHLARELFDEIPRPDI----VSYNTLIAAHA--HRGEHGPAV--RLFKEAREAG 143
V+ LF E+ R D+ S+ +AA A H G + +L K E G
Sbjct: 131 YVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKG 190
Query: 144 LCLDGFTLSGVIKAC--REDVGLVMQLHCFAVLCGYSCYASVC----------------- 184
+ G L + C +D LV Q ++ + C
Sbjct: 191 NVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMP 250
Query: 185 -------NAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLF 237
N ++ + G + A++V +M + SWN ++ + EA F
Sbjct: 251 NPDTVTYNELIDAFVKSGDFNNAFQVLSDMPN--PNSSSWNTILTGYVNSEKSGEATEFF 308
Query: 238 GEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKC 297
+M G++ D ++++ VL A L + G H K G + V S LIDMYSKC
Sbjct: 309 TKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKC 368
Query: 298 APRGMLDCMKV-FEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGF-RPDDCS 355
GML ++ F + +L++WN MISG++++ D S +A+ F +++ F +PD +
Sbjct: 369 ---GMLKHAELMFWTMPRKNLIVWNEMISGYARNGD-SIEAIKLFNQLKQERFLKPDRFT 424
Query: 356 FSCVTSACSNLSSP 369
F + + CS+ P
Sbjct: 425 FLNLLAVCSHCEVP 438
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 113/287 (39%), Gaps = 63/287 (21%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPH-STYLSNHFTLLYSKCGTLDNARTSFRL 76
+FT L C G +H+ +K + + + N +Y KCG +D+A F+
Sbjct: 158 SFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQH 217
Query: 77 TNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGE-------- 128
+ S+NAI+ +C ++ L L F ++P PD V+YN LI A G+
Sbjct: 218 MEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVL 277
Query: 129 -----------------------HGPAVRLFKEAREAGLCLDGFTLS------------- 152
G A F + +G+ D ++LS
Sbjct: 278 SDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVP 337
Query: 153 --GVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEG 210
+I AC +GL ++ V +A++ Y G+L A +F M
Sbjct: 338 WGSLIHACAHKLGLDSRV-------------VVASALIDMYSKCGMLKHAELMFWTMPR- 383
Query: 211 CRDEISWNAMIVACGQCREGKEALVLFGEMVR-MGMKIDMFTMASVL 256
++ I WN MI + + EA+ LF ++ + +K D FT ++L
Sbjct: 384 -KNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLL 429
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 132/410 (32%), Positives = 214/410 (52%), Gaps = 42/410 (10%)
Query: 231 KEALVLFGEMVRMGMKIDMFTMASVLTAF--TCLEDLAGGMQFHGRMIKSGFNWNPHVGS 288
K+AL + +++R G D +T S+++ TC D G HG+ IK G + V +
Sbjct: 100 KQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVD--SGKMCHGQAIKHGCDQVLPVQN 157
Query: 289 GLIDMYSKCAPRGMLD-CMKVFEEISEPDLVLWNTMISGFSQHED--------------- 332
L+ MY+ C G LD K+F EI + D+V WN++I+G ++ D
Sbjct: 158 SLMHMYTCC---GALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKN 214
Query: 333 -LSEDALIC--------------FQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHA 377
+S + +I F++M RAGF+ ++ + + +AC + G+ VHA
Sbjct: 215 IISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHA 274
Query: 378 LAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEG 437
I++ + S+ V ++ AL+ MY KC + ARR+FD++ N V+ N MI + HG
Sbjct: 275 SLIRTFLNSS-VVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPE 333
Query: 438 ESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCM 497
L+LFE M+ + P+ +TF+ VL CA G V +GQ Y+++M ++F I+P H CM
Sbjct: 334 GGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCM 393
Query: 498 VDLLGRAGKLEEAERIIETMP---FDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEP 554
+L AG EEAE ++ +P P S +WA LL + R GN L A ++ +P
Sbjct: 394 ANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDP 453
Query: 555 HNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVH 604
N Y +L N+Y+ GRWE+ V+ +++ER + + PGC + + VH
Sbjct: 454 LNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVH 503
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 177/408 (43%), Gaps = 49/408 (12%)
Query: 18 TFTNLLKQCISQRD-ISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRL 76
TF +L+ CI + + +GK H IK + N +Y+ CG LD A+ F
Sbjct: 120 TFVSLI-SCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVE 178
Query: 77 TNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLF 136
++ S+N+II V++ + A +LFDE+P +I+S+N +I+A+ G ++ LF
Sbjct: 179 IPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLF 238
Query: 137 KEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVC--NAVLARYGGR 194
+E AG + TL ++ AC L A L +SV A++ YG
Sbjct: 239 REMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKC 298
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKE--ALVLFGEMVRMGMKIDMFTM 252
+ A R+F + R++++WN MI+A C G+ L LF M+ ++ D T
Sbjct: 299 KEVGLARRIFDSL--SIRNKVTWNVMILA--HCLHGRPEGGLELFEAMINGMLRPDEVTF 354
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSG--LIDMYSKCAPRGMLDCMKVFE 310
VL ++ G ++ M+ F P+ G + ++YS
Sbjct: 355 VGVLCGCARAGLVSQGQSYYSLMVDE-FQIKPNFGHQWCMANLYSS-------------- 399
Query: 311 EISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPS 370
+GF + +E+AL +++ P+ ++ + S+ +P+
Sbjct: 400 --------------AGFPEE---AEEAL---KNLPDEDVTPESTKWANLLSSSRFTGNPT 439
Query: 371 LGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH 418
LG+ + I++D P N + L+ +YS G D RV + + E
Sbjct: 440 LGESIAKSLIETD-PLN-YKYYHLLMNIYSVTGRWEDVNRVREMVKER 485
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 150/381 (39%), Gaps = 50/381 (13%)
Query: 255 VLTAFTCLED---LAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEE 311
+L F +ED + Q H R+I SG W+ L+ S+ + ++
Sbjct: 22 LLKGFKLVEDSNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSY--TVSIYRS 79
Query: 312 ISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSL 371
I + L N + + + AL + D+ R GF PD +F + S
Sbjct: 80 IGK--LYCANPVFKAYLVSSS-PKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDS 136
Query: 372 GKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDAR---------------------- 409
GK H AIK + V N+L+ MY+ CG L A+
Sbjct: 137 GKMCHGQAIKHGC-DQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMV 195
Query: 410 ---------RVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFIS 460
++FD MP+ N +S N MI+ Y G S+ LF M++ N T +
Sbjct: 196 RNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVL 255
Query: 461 VLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFD 520
+L+AC + +++EG+ + F + + ++D+ G+ ++ A RI +++
Sbjct: 256 LLNACGRSARLKEGRSVHASLIRTF-LNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIR 314
Query: 521 PGSIEWAALLGA----CRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEES 576
+ W ++ A R G +EL N L+ + V +V + A AG +
Sbjct: 315 -NKVTWNVMILAHCLHGRPEGGLELFEAMINGMLR---PDEVTFVGVLCGCARAGLVSQG 370
Query: 577 ATVKRLM-RERGVKKKPGCSW 596
+ LM E +K G W
Sbjct: 371 QSYYSLMVDEFQIKPNFGHQW 391
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/482 (28%), Positives = 232/482 (48%), Gaps = 41/482 (8%)
Query: 86 NAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLC 145
N++I A K + H+A +F + DIVS+N +I A A A++LF E G
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS 313
Query: 146 LDGFTLSGV--IKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRV 203
+ T V + + + + Q+H + G + NA++ Y G L ++
Sbjct: 314 PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLC 373
Query: 204 FHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLE 263
F + + ++ + WNA++ ++G L LF +M++MG + +T ++ L + C+
Sbjct: 374 FDYIRD--KNIVCWNALLSGYAN-KDGPICLSLFLQMLQMGFRPTEYTFSTALKS-CCVT 429
Query: 264 DLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSK--------------CAPRGML------ 303
+L Q H +++ G+ N +V S L+ Y+K P ++
Sbjct: 430 EL---QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVA 486
Query: 304 ----------DCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDD 353
+ +K+ + +PD V WN I+ S+ D E+ + F+ M ++ RPD
Sbjct: 487 GIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSR-SDYHEEVIELFKHMLQSNIRPDK 545
Query: 354 CSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFD 413
+F + S CS L +LG +H L K+D V N L+ MY KCG++ +VF+
Sbjct: 546 YTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFE 605
Query: 414 TMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEE 473
E N ++ ++I+ HG E+L+ F+ + P+ ++FIS+L+AC H G V+E
Sbjct: 606 ETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKE 665
Query: 474 GQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGAC 533
G F MK+ +G+EPE H+ C VDLL R G L+EAE +I MPF + W L C
Sbjct: 666 GMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Query: 534 RK 535
+
Sbjct: 725 NR 726
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 157/584 (26%), Positives = 274/584 (46%), Gaps = 61/584 (10%)
Query: 52 YLSNHFTL--LYSKCGTLD-NARTSFR-LTNNPNVFSYNAIIDACV-----KHSHLHLAR 102
YL N T+ L S C +LD A T L+ +F +A + C+ + L +A
Sbjct: 111 YLPNQSTVSGLLS-CASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAE 169
Query: 103 ELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIK--ACRE 160
++F+++P + ++N +++ HRG + F+E G L + GV+K +C +
Sbjct: 170 QVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVK 229
Query: 161 DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAM 220
D+ + QLHC A G C SV N++++ YG G A R+F + G D +SWNA+
Sbjct: 230 DLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSW--DIVSWNAI 287
Query: 221 IVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGF 280
I A + +AL LF M G + T SVL + ++ L+ G Q HG +IK+G
Sbjct: 288 ICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGC 347
Query: 281 NWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALIC 340
+G+ LID Y+KC + D F+ I + ++V WN ++SG++ ++D IC
Sbjct: 348 ETGIVLGNALIDFYAKCG--NLEDSRLCFDYIRDKNIVCWNALLSGYA-----NKDGPIC 400
Query: 341 ---FQDMQRAGFRPDDCSFSCVTSAC-------------------------SNLSSPSLG 372
F M + GFRP + +FS +C S + S +
Sbjct: 401 LSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKN 460
Query: 373 KQVHALAIKSDIPSNRVSVN--NALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGY 430
+ ++ + D S SV N + +YS+ G H++ ++ T+ + +TVS N I
Sbjct: 461 QLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAAC 520
Query: 431 AQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMM-KEKFGIEP 489
++ E ++LF+ M+Q +I P+ TF+S+LS C+ + G ++ K F
Sbjct: 521 SRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSC-- 578
Query: 490 EAKHFSC--MVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAAN 547
A F C ++D+ G+ G + ++ E + I W AL+ HG + A++
Sbjct: 579 -ADTFVCNVLIDMYGKCGSIRSVMKVFEETR-EKNLITWTALISCLGIHGYGQEALEKFK 636
Query: 548 KFLQL--EPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVK 589
+ L L +P + V ++ + G +E + + M++ GV+
Sbjct: 637 ETLSLGFKP-DRVSFISILTACRHGGMVKEGMGLFQKMKDYGVE 679
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 141/499 (28%), Positives = 226/499 (45%), Gaps = 38/499 (7%)
Query: 82 VFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEARE 141
V+ N II K + LA ++FD++P + VS+NT+I ++ G+ A +F E R
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 142 AGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCG-YSCYASVCNAVLARYGGRGLLSEA 200
G + T+SG++ DV QLH ++ G + A V +L YG LL A
Sbjct: 109 FGYLPNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMA 168
Query: 201 WRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFT 260
+VF +M + +WN M+ G KE + F E+VRMG + + VL +
Sbjct: 169 EQVFEDMPFKSLE--TWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVS 226
Query: 261 CLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLW 320
C++DL Q H K G + V + LI Y KC M + ++F++ D+V W
Sbjct: 227 CVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAE--RMFQDAGSWDIVSW 284
Query: 321 NTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAI 380
N +I ++ E+ AL F M GF P+ ++ V S + S G+Q+H + I
Sbjct: 285 NAIICATAKSEN-PLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLI 343
Query: 381 KSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGE-S 439
K+ + V + NAL+ Y+KCGNL D+R FD + + N V N++++GYA +G
Sbjct: 344 KNGCETGIV-LGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANK--DGPIC 400
Query: 440 LQLFELMMQEDIVPNNITFISVLSACAHTGKVE----------EGQKYF----------- 478
L LF M+Q P TF + L +C T + E Y
Sbjct: 401 LSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKN 460
Query: 479 NMMKEKFGIEPEAKHFSCMVDL------LGRAGKLEEAERIIETMPFDPGSIEWAALLGA 532
+M + + A + +V L R G+ E+ ++I T+ P ++ W + A
Sbjct: 461 QLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIAA 519
Query: 533 CRKHGNVELAVKAANKFLQ 551
C + E ++ LQ
Sbjct: 520 CSRSDYHEEVIELFKHMLQ 538
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 120/266 (45%), Gaps = 21/266 (7%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF+ LK C ++ + LH++ ++ + Y+ + Y+K +++A
Sbjct: 418 TFSTALKSCC----VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWA 473
Query: 78 NNP-NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLF 136
+ P +V N + + H + +L + +PD VS+N IAA + H + LF
Sbjct: 474 SGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELF 533
Query: 137 KEAREAGLCLDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYAS-VCNAVLARYGG 193
K ++ + D +T ++ C + D+ L +H +SC + VCN ++ YG
Sbjct: 534 KHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGK 593
Query: 194 RGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMA 253
G + +VF E E ++ I+W A+I G G+EAL F E + +G K D +
Sbjct: 594 CGSIRSVMKVFEETRE--KNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFI 651
Query: 254 SVLTAFTCLEDLAGGMQFHGRMIKSG 279
S+LTA HG M+K G
Sbjct: 652 SILTACR-----------HGGMVKEG 666
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 5/163 (3%)
Query: 359 VTSACSNLSSPSLGKQVHALAIK-SDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPE 417
+ + C S + K +HAL+I + V V N ++++Y K G + A +VFD MPE
Sbjct: 18 LLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPE 77
Query: 418 HNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKY 477
N VS N++I GY+++G ++ +F M +PN T +S L +CA V G +
Sbjct: 78 RNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQST-VSGLLSCASL-DVRAGTQ- 134
Query: 478 FNMMKEKFGI-EPEAKHFSCMVDLLGRAGKLEEAERIIETMPF 519
+ + K+G+ +A +C++ L GR LE AE++ E MPF
Sbjct: 135 LHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPF 177
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKT-FIPHSTYLSNHFTLLYSKCGTLDNARTSFRL 76
TF ++L C D++ G S+H L KT F T++ N +Y KCG++ + F
Sbjct: 547 TFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEE 606
Query: 77 TNNPNVFSYNAIIDACVKHSHLHLARELFDEIP----RPDIVSYNTLIAAHAHRGEHGPA 132
T N+ ++ A+I H + A E F E +PD VS+ +++ A H G
Sbjct: 607 TREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEG 666
Query: 133 VRLFKEAREAGL 144
+ LF++ ++ G+
Sbjct: 667 MGLFQKMKDYGV 678
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 206 bits (523), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 180/345 (52%), Gaps = 17/345 (4%)
Query: 268 GMQFHGRMIKSGFNWNPH-VGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISG 326
G HG + K GF + +G+ L+ Y+K + KVF+E+ E V WN MI G
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKNGD--LRYARKVFDEMPERTSVTWNAMIGG 187
Query: 327 FSQHEDL----SEDALICFQDMQ--RAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAI 380
+ H+D + A++ F+ +G RP D + CV SA S +G VH
Sbjct: 188 YCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIE 247
Query: 381 KSDI-PSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGES 439
K P V + ALV MYSKCG L++A VF+ M N + SM TG A +G E+
Sbjct: 248 KLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNET 307
Query: 440 LQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVD 499
L M + I PN ITF S+LSA H G VEEG + F MK +FG+ P +H+ C+VD
Sbjct: 308 PNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVD 367
Query: 500 LLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAV- 558
LLG+AG+++EA + I MP P +I +L AC +G + + L++E +
Sbjct: 368 LLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKL 427
Query: 559 ------PYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWI 597
YV LSN+ A G+W E +++ M+ER +K +PG S++
Sbjct: 428 SGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 209/413 (50%), Gaps = 36/413 (8%)
Query: 217 WNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMI 276
+N +I + E K +L LF M+ ++ + T S++ A ++ G+ HG+ +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 277 KSGFNWNPHVGSGLIDMYSK----------------------------CAPRGMLD-CMK 307
K GF W+P V + + Y + C G +D +
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 308 VFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDM---QRAGFRPDDCSFSCVTSACS 364
F+ + D+V W T+I+GFS+ + L AL+ F +M +RA P++ +F V S+C+
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSK-KGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 365 NLSSPS--LGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVS 422
N LGKQ+H + +I + MY K G+L A +FD + + +
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTAL-LDMYGKAGDLEMALTIFDQIRDKKVCA 291
Query: 423 LNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMK 482
N++I+ A +G ++L++FE+M + PN IT +++L+ACA + V+ G + F+ +
Sbjct: 292 WNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSIC 351
Query: 483 EKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELA 542
++ I P ++H+ C+VDL+GRAG L +A I+++PF+P + ALLGAC+ H N EL
Sbjct: 352 SEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELG 411
Query: 543 VKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCS 595
+ + L+P + YV LS A W E+ +++ M E G++K P S
Sbjct: 412 NTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 158/362 (43%), Gaps = 20/362 (5%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF +L+K S +S G +LH +K ++ F Y + G L+++R F
Sbjct: 88 TFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDI 147
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
NP V + N+++DAC ++ + A E F +P D+VS+ T+I + +G H A+ +F
Sbjct: 148 LNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFG 207
Query: 138 EA---REAGLCLDGFTLSGVIKAC----REDVGLVMQLHCFAVLCGYSCYASVCNAVLAR 190
E A + + T V+ +C + + L Q+H + + ++ A+L
Sbjct: 208 EMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDM 267
Query: 191 YGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMF 250
YG G L A +F ++ + + +WNA+I A K+AL +F M + +
Sbjct: 268 YGKAGDLEMALTIFDQIRD--KKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGI 325
Query: 251 TMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNP---HVGSGLIDMYSKCAPRGMLDCMK 307
T+ ++LTA + + G+Q I S + P H G ++D+ + ++D
Sbjct: 326 TLLAILTACARSKLVDLGIQLFSS-ICSEYKIIPTSEHYGC-VVDLIGRAGL--LVDAAN 381
Query: 308 VFEEIS-EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNL 366
+ + EPD + ++ HE+ + Q G +P C S + L
Sbjct: 382 FIQSLPFEPDASVLGALLGACKIHENTELGNTV---GKQLIGLQPQHCGQYVALSTFNAL 438
Query: 367 SS 368
S
Sbjct: 439 DS 440
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 202 bits (513), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 149/512 (29%), Positives = 240/512 (46%), Gaps = 46/512 (8%)
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
NV +I+D K + AR +FDEI P VS+N ++ + G + AV +F +
Sbjct: 196 NVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKML 255
Query: 141 EAGLCLDGFTLSGVIKACREDVGLVMQ--LHCFAVLCGYSCYASVCNAV----------- 187
E + T+S V+ AC + L + +H AV V +V
Sbjct: 256 ELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLE 315
Query: 188 --------------------LARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQC 227
++ Y GL EA +F M E R+ +SWNAM+
Sbjct: 316 SARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPE--RNIVSWNAMLGGYVHA 373
Query: 228 REGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVG 287
E EAL M + ID T+ +L + + D+ G Q HG + + G++ N V
Sbjct: 374 HEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVA 433
Query: 288 SGLIDMYSKCAPRGMLDCMKV-FEEISE-PDLVLWNTMISGFSQHEDLSEDALICFQDMQ 345
+ L+DMY KC G L + F ++SE D V WN +++G ++ SE AL F+ MQ
Sbjct: 434 NALLDMYGKC---GTLQSANIWFRQMSELRDEVSWNALLTGVAR-VGRSEQALSFFEGMQ 489
Query: 346 RAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNL 405
+P + + + + C+N+ + +LGK +H I+ + V + A+V MYSKC
Sbjct: 490 VEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKID-VVIRGAMVDMYSKCRCF 547
Query: 406 HDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSAC 465
A VF + + NS+I G ++G E +LF L+ E + P+++TF+ +L AC
Sbjct: 548 DYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQAC 607
Query: 466 AHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIE 525
G VE G +YF+ M K+ I P+ +H+ CM++L + G L + E + MPFDP
Sbjct: 608 IREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQM 667
Query: 526 WAALLGACRKHGNVELAVKAANKFLQ---LEP 554
+ AC+++ +L AA + + L+P
Sbjct: 668 LTRINDACQRYRWSKLGAWAAKRLMNDHYLQP 699
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 194/402 (48%), Gaps = 9/402 (2%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T ++++ C + GK +HA+ +K + T +S +Y KC L++AR F T
Sbjct: 265 TVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQT 324
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+ ++ S+ + + ARELFD +P +IVS+N ++ + H E A+
Sbjct: 325 RSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLT 384
Query: 138 EAREAGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
R+ +D TL ++ C DV + Q H F GY V NA+L YG G
Sbjct: 385 LMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCG 444
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
L A F +M E RDE+SWNA++ + ++AL F E +++ K +T+A++
Sbjct: 445 TLQSANIWFRQMSE-LRDEVSWNALLTGVARVGRSEQALSFF-EGMQVEAKPSKYTLATL 502
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEP 315
L + L G HG +I+ G+ + + ++DMYSKC R ++VF+E +
Sbjct: 503 LAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKC--RCFDYAIEVFKEAATR 560
Query: 316 DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQ- 374
DL+LWN++I G ++ S++ F ++ G +PD +F + AC LG Q
Sbjct: 561 DLILWNSIIRGCCRN-GRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQY 619
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP 416
+++ K I S +V + ++ +Y K G LH MP
Sbjct: 620 FSSMSTKYHI-SPQVEHYDCMIELYCKYGCLHQLEEFLLLMP 660
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 182/390 (46%), Gaps = 38/390 (9%)
Query: 185 NAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMG 244
N + YG G + +A +F EM E RD SWNA+I AC Q E +F M R G
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPE--RDGGSWNAVITACAQNGVSDEVFRMFRRMNRDG 157
Query: 245 MKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD 304
++ + A VL + + DL Q H ++K G++ N + + ++D+Y KC R M D
Sbjct: 158 VRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKC--RVMSD 215
Query: 305 CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACS 364
+VF+EI P V WN ++ + + +++A++ F M RP + + S V ACS
Sbjct: 216 ARRVFDEIVNPSDVSWNVIVRRYLEM-GFNDEAVVMFFKMLELNVRPLNHTVSSVMLACS 274
Query: 365 NLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDT---------- 414
+ +GK +HA+A+K + ++ V V+ ++ MY KC L ARRVFD
Sbjct: 275 RSLALEVGKVIHAIAVKLSVVADTV-VSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWT 333
Query: 415 ---------------------MPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVP 453
MPE N VS N+M+ GY E+L LM QE
Sbjct: 334 SAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENI 393
Query: 454 NNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERI 513
+N+T + +L+ C+ V+ G++ + + G + + ++D+ G+ G L+ A
Sbjct: 394 DNVTLVWILNVCSGISDVQMGKQAHGFIY-RHGYDTNVIVANALLDMYGKCGTLQSANIW 452
Query: 514 IETMPFDPGSIEWAALLGACRKHGNVELAV 543
M + W ALL + G E A+
Sbjct: 453 FRQMSELRDEVSWNALLTGVARVGRSEQAL 482
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 138/532 (25%), Positives = 238/532 (44%), Gaps = 74/532 (13%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEA 139
P +F N I+A K + ARELF+E+P D S+N +I A A G R+F+
Sbjct: 94 PPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRM 153
Query: 140 REAGLCLDGFTLSGVIKACR--EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLL 197
G+ + +GV+K+C D+ L+ QLHC V GYS + +++ YG ++
Sbjct: 154 NRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVM 213
Query: 198 SEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLT 257
S+A RVF E+ ++SWN ++ + EA+V+F +M+ + ++ T++SV+
Sbjct: 214 SDARRVFDEIVNP--SDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVML 271
Query: 258 AFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKC----APRGMLD--------- 304
A + L G H +K + V + + DMY KC + R + D
Sbjct: 272 ACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKS 331
Query: 305 ----------------CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAG 348
++F+ + E ++V WN M+ G+ + E AL M++
Sbjct: 332 WTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDE-ALDFLTLMRQEI 390
Query: 349 FRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDA 408
D+ + + + CS +S +GKQ H + +N V V NAL+ MY KCG L A
Sbjct: 391 ENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTN-VIVANALLDMYGKCGTLQSA 449
Query: 409 RRVFDTMPE-HNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAH 467
F M E + VS N+++TG A+ G ++L FE MQ + P+ T ++L+ CA+
Sbjct: 450 NIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFE-GMQVEAKPSKYTLATLLAGCAN 508
Query: 468 TGKVEEGQKYFN-MMKEKFGIEPEAKHFSCMVDLL------------------------- 501
+ G+ ++++ + I+ + MVD+
Sbjct: 509 IPALNLGKAIHGFLIRDGYKIDVVIR--GAMVDMYSKCRCFDYAIEVFKEAATRDLILWN 566
Query: 502 ---------GRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVK 544
GR+ ++ E ++E P + + +L AC + G+VEL +
Sbjct: 567 SIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQ 618
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 143/296 (48%), Gaps = 11/296 (3%)
Query: 291 IDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFR 350
I+ Y KC + D ++FEE+ E D WN +I+ +Q+ +S++ F+ M R G R
Sbjct: 103 IEAYGKCG--CVDDARELFEEMPERDGGSWNAVITACAQN-GVSDEVFRMFRRMNRDGVR 159
Query: 351 PDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARR 410
+ SF+ V +C + L +Q+H +K N V + ++V +Y KC + DARR
Sbjct: 160 ATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGN-VDLETSIVDVYGKCRVMSDARR 218
Query: 411 VFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGK 470
VFD + + VS N ++ Y + G E++ +F M++ ++ P N T SV+ AC+ +
Sbjct: 219 VFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLA 278
Query: 471 VEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERII-ETMPFDPGSIEWAAL 529
+E G K + + K + + + + D+ + +LE A R+ +T D S W +
Sbjct: 279 LEVG-KVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKS--WTSA 335
Query: 530 LGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRE 585
+ G L +A F + N V + + Y A W+E+ LMR+
Sbjct: 336 MSGYAMSG---LTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQ 388
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 8/207 (3%)
Query: 362 ACSNLSSPSLGKQVHA-LAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNT 420
+CS+ + ++V + L S +P + + N + Y KCG + DAR +F+ MPE +
Sbjct: 70 SCSSKALVVQARKVQSHLVTFSPLPP--IFLLNRAIEAYGKCGCVDDARELFEEMPERDG 127
Query: 421 VSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNM 480
S N++IT AQ+GV E ++F M ++ + +F VL +C + ++ +
Sbjct: 128 GSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQ-LHC 186
Query: 481 MKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVE 540
K+G + +VD+ G+ + +A R+ + + +P + W ++ + G +
Sbjct: 187 AVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEI-VNPSDVSWNVIVRRYLEMGFND 245
Query: 541 LAVKAANKFLQL--EPHN-AVPYVMLS 564
AV K L+L P N V VML+
Sbjct: 246 EAVVMFFKMLELNVRPLNHTVSSVMLA 272
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 144/522 (27%), Positives = 255/522 (48%), Gaps = 50/522 (9%)
Query: 112 DIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLV--MQLH 169
D S+ L+ + + V ++ + +G+ ++ V++AC + +V +H
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIH 127
Query: 170 CFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCRE 229
A+ G V ++ Y G + A + F ++ E ++ +SWN+++ + E
Sbjct: 128 AQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAE--KNTVSWNSLLHGYLESGE 185
Query: 230 GKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRM-IKSGFNWNPHVGS 288
EA +F ++ D + +++++ D+ M +KS +WN +G
Sbjct: 186 LDEARRVFDKIPEK----DAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGG 241
Query: 289 GLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLS-------------- 334
Y C R M F+ + + + V W TMISG+++ D+
Sbjct: 242 -----YVNC--REMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDK 294
Query: 335 ----------------EDALICFQDM--QRAGFRPDDCSFSCVTSACSNLSSPSLGKQVH 376
+DAL F M + + +PD+ + S V SA S L + S G V
Sbjct: 295 LVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVE 354
Query: 377 ALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVE 436
+ + I + + ++ +L+ +Y K G+ A ++F + + +TVS ++MI G +G+
Sbjct: 355 SYITEHGIKIDDL-LSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMA 413
Query: 437 GESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSC 496
E+ LF M+++ I PN +TF +LSA +H+G V+EG K FN MK+ +EP A H+
Sbjct: 414 TEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDH-NLEPSADHYGI 472
Query: 497 MVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHN 556
MVD+LGRAG+LEEA +I++MP P + W ALL A H NVE A + ++LE
Sbjct: 473 MVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDP 532
Query: 557 AVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQ 598
L+ +Y+S GRW+++ TV+ ++E+ + K GCSW++
Sbjct: 533 TGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 106/464 (22%), Positives = 201/464 (43%), Gaps = 60/464 (12%)
Query: 20 TNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNN 79
T++L+ C ++ GK +HA +K + Y+ LYS+ G ++ A+ +F
Sbjct: 108 TSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAE 167
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLF--- 136
N S+N+++ ++ L AR +FD+IP D VS+N +I+++A +G+ G A LF
Sbjct: 168 KNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAM 227
Query: 137 --KEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGR 194
K + + G+ +K R + Q + + + S Y +
Sbjct: 228 PLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKL----------- 276
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKI--DMFTM 252
G + A +F M + +D++ ++AMI Q + K+AL LF +M+ I D T+
Sbjct: 277 GDVQSAEELFRLMSK--KDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITL 334
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEI 312
+SV++A + L + + G + + G + + + LID+Y K K+F +
Sbjct: 335 SSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGD--FAKAFKMFSNL 392
Query: 313 SEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLG 372
++ D V ++ MI G C + + + ++L + +
Sbjct: 393 NKKDTVSYSAMIMG---------------------------CGINGMATEANSLFTAMIE 425
Query: 373 KQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHN-TVSLNSMITGYA 431
K+ IP N V+ L++ YS G + + + F++M +HN S +
Sbjct: 426 KK---------IPPNVVTF-TGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVD 475
Query: 432 QHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQ 475
G G + +EL+ + PN + ++L A VE G+
Sbjct: 476 MLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGE 519
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/358 (32%), Positives = 179/358 (50%), Gaps = 15/358 (4%)
Query: 372 GKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYA 431
K VH I + + +S N+ L+ MYS CG ++A VF+ M E N + +I +A
Sbjct: 273 AKTVHG-KISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFA 331
Query: 432 QHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEA 491
++G +++ +F +E +P+ F + AC G V+EG +F M +GI P
Sbjct: 332 KNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSI 391
Query: 492 KHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ 551
+ + +V++ G L+EA +E MP +P W L+ R HGN+EL A
Sbjct: 392 EDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEF 451
Query: 552 LEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDS 611
L+P + A E+ + KR GVK + + F A D+
Sbjct: 452 LDPTRLNKQSREGFIPVKASDVEKESLKKRSGILHGVK-----------SSMQEFRAGDT 500
Query: 612 SHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGL 671
+ P E+ + + + M + GYV + R AL D+ E KE LL HSE++A A +
Sbjct: 501 NLPENDELFQLLRNLKMHMVEVGYVAETRMAL---HDIDQESKETLLLGHSERIAFARAV 557
Query: 672 ISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
+++ P V+KNLR+C DCHNA+K++S I GRE+ RD RFH K G C+CKDYW
Sbjct: 558 LNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 83/195 (42%), Gaps = 11/195 (5%)
Query: 227 CREGK--EALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNP 284
C+ GK +AL + M +D+ + + E L HG++ S + +
Sbjct: 230 CKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDL 289
Query: 285 HVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDM 344
L++MYS C + VFE++SE +L W +I F+++ EDA+ F
Sbjct: 290 SSNHVLLEMYSNCGLAN--EAASVFEKMSEKNLETWCIIIRCFAKN-GFGEDAIDMFSRF 346
Query: 345 QRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDI---PSNRVSVNNALVAMYSK 401
+ G PD F + AC L G +H ++ D PS V +LV MY+
Sbjct: 347 KEEGNIPDGQLFRGIFYACGMLGDVDEG-LLHFESMSRDYGIAPSIEDYV--SLVEMYAL 403
Query: 402 CGNLHDARRVFDTMP 416
G L +A + MP
Sbjct: 404 PGFLDEALEFVERMP 418
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 192 bits (489), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 192/394 (48%), Gaps = 20/394 (5%)
Query: 336 DALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNAL 395
+A+ ++ G+ D + C + + VH I P + V NA+
Sbjct: 102 EAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCD-VGARNAI 160
Query: 396 VAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNN 455
+ MYS C ++ DA +VF+ MPE N+ +L M+ + +G E++ LF +E PN
Sbjct: 161 IEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNG 220
Query: 456 ITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIE 515
F V S C TG V+EG F M ++GI P +H+ + +L +G L+EA +E
Sbjct: 221 EIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVE 280
Query: 516 TMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEE 575
MP +P W L+ R HG+VEL + A +L+ + +SAG
Sbjct: 281 RMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDATRL-------DKVSSAGLVAT 333
Query: 576 SATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGY 635
A+ + +E + +P F DSSHP + I+E + + ++K+ GY
Sbjct: 334 KAS-DFVKKEPSTRSEPYF--------YSTFRPVDSSHPQMNIIYETLMSLRSQLKEMGY 384
Query: 636 VPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLRICGDCHNA 695
VPD R+ + A E + ++ + E++AV L+ +K I ++ N+RI GDCH+
Sbjct: 385 VPDTRYYRSL---IMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIVGDCHDM 441
Query: 696 IKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
+KL+S I+GR++ RDA +H FK G C C + W
Sbjct: 442 MKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 182/355 (51%), Gaps = 36/355 (10%)
Query: 277 KSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSE- 335
K GF + +V + L+ MY M+D KVF+E+ E + V WN MI+G + D +
Sbjct: 151 KLGFESHVYVQTALVGMY--LVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKA 208
Query: 336 -----------------------------DALICFQDMQRA-GFRPDDCSFSCVTSACSN 365
+A++ F M +P++ + + A N
Sbjct: 209 LCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWN 268
Query: 366 LSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP--EHNTVSL 423
L + VHA K + V N+L+ Y+KCG + A + F +P N VS
Sbjct: 269 LGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSW 328
Query: 424 NSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEG-QKYFNMMK 482
+MI+ +A HG+ E++ +F+ M + + PN +T ISVL+AC+H G EE ++FN M
Sbjct: 329 TTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMV 388
Query: 483 EKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELA 542
++ I P+ KH+ C+VD+L R G+LEEAE+I +P + ++ W LLGAC + + ELA
Sbjct: 389 NEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELA 448
Query: 543 VKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWI 597
+ K ++LE + YV++SN++ GR+ ++ ++ M RGV K PG S +
Sbjct: 449 ERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 136/313 (43%), Gaps = 25/313 (7%)
Query: 51 TYLSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPR 110
Y+ +Y G + +A F N ++N +I A +++P
Sbjct: 158 VYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPN 217
Query: 111 PDIVSYNTLIAAHAHRGEHGPAVRLFKEAREA-GLCLDGFTLSGVIKACRE--DVGLVMQ 167
+VS+ T+I +A + A+ LF + + T+ ++ A D+ +
Sbjct: 218 RTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGS 277
Query: 168 LHCFAVLCGY-SCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQ 226
+H + G+ C V N+++ Y G + A++ F E+ G ++ +SW MI A
Sbjct: 278 VHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAI 337
Query: 227 CREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGG------MQFHGRMIKSGF 280
GKEA+ +F +M R+G+K + TM SVL A + GG ++F M+ +
Sbjct: 338 HGMGKEAVSMFKDMERLGLKPNRVTMISVLNACS-----HGGLAEEEFLEFFNTMVNE-Y 391
Query: 281 NWNPHVG--SGLIDMYSKCAPRGML-DCMKVFEEIS-EPDLVLWNTMISGFSQHED--LS 334
P V L+DM + +G L + K+ EI E V+W ++ S ++D L+
Sbjct: 392 KITPDVKHYGCLVDMLRR---KGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELA 448
Query: 335 EDALICFQDMQRA 347
E +++R+
Sbjct: 449 ERVTRKLMELERS 461
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 123/304 (40%), Gaps = 47/304 (15%)
Query: 317 LVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPD---------DCSFSCVTSACSNLS 367
L L+N ++ +S E A + +QR F D ++ + A SN
Sbjct: 77 LFLFNPLLRCYSLGET-PLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPR 135
Query: 368 SPSLGKQVHALAIKSDIP-SNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSM 426
PSL + + + + V V ALV MY GN+ DA +VFD MPE N V+ N M
Sbjct: 136 FPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVM 195
Query: 427 IT-------------------------------GYAQHGVEGESLQLFELMMQED-IVPN 454
IT GYA+ E++ LF M+ D I PN
Sbjct: 196 ITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPN 255
Query: 455 NITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERII 514
IT +++L A + G ++ + ++ + + + + ++D + G ++ A +
Sbjct: 256 EITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFF 315
Query: 515 ETMPFDPGS-IEWAALLGACRKHGNVELAVKAANKF--LQLEPHNAVPYVMLSNMYASAG 571
+P + + W ++ A HG + AV L L+P N V + + N + G
Sbjct: 316 IEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKP-NRVTMISVLNACSHGG 374
Query: 572 RWEE 575
EE
Sbjct: 375 LAEE 378
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 134/470 (28%), Positives = 240/470 (51%), Gaps = 12/470 (2%)
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
++ ++ N +I +CV+ L AR++FD +P + V++ +I + G A LF+
Sbjct: 113 DDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFE 172
Query: 138 EAREAGLCLDGFTL-SGVIKAC--REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGR 194
+ + G+ + ++ C R + L Q+H V G V ++++ Y
Sbjct: 173 DYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLI-VESSLVYFYAQC 231
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
G L+ A R F M E +D ISW A+I AC + G +A+ +F M+ + FT+ S
Sbjct: 232 GELTSALRAFDMMEE--KDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCS 289
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISE 314
+L A + + L G Q H ++K + VG+ L+DMY+KC + DC KVF+ +S
Sbjct: 290 ILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGE--ISDCRKVFDGMSN 347
Query: 315 PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQ 374
+ V W ++I+ ++ E E+A+ F+ M+R ++ + + AC ++ + LGK+
Sbjct: 348 RNTVTWTSIIAAHAR-EGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKE 406
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHG 434
+HA IK+ I N V + + LV +Y KCG DA V +P + VS +MI+G + G
Sbjct: 407 LHAQIIKNSIEKN-VYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLG 465
Query: 435 VEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHF 494
E E+L + M+QE + PN T+ S L ACA++ + G+ ++ K+ +
Sbjct: 466 HESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHAL-SNVFVG 524
Query: 495 SCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVK 544
S ++ + + G + EA R+ ++MP + + W A++ ++G A+K
Sbjct: 525 SALIHMYAKCGFVSEAFRVFDSMP-EKNLVSWKAMIMGYARNGFCREALK 573
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 216/450 (48%), Gaps = 40/450 (8%)
Query: 19 FTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTN 78
F LL C + + G+ +H +K + + + + Y++CG L +A +F
Sbjct: 187 FVCLLNLCSRRAEFELGRQVHGNMVKVGVGN-LIVESSLVYFYAQCGELTSALRAF---- 241
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
D + D++S+ +I+A + +G A+ +F
Sbjct: 242 ---------------------------DMMEEKDVISWTAVISACSRKGHGIKAIGMFIG 274
Query: 139 AREAGLCLDGFTLSGVIKACREDVGLVM--QLHCFAVLCGYSCYASVCNAVLARYGGRGL 196
+ FT+ ++KAC E+ L Q+H V V +++ Y G
Sbjct: 275 MLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGE 334
Query: 197 LSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVL 256
+S+ +VF M R+ ++W ++I A + G+EA+ LF M R + + T+ S+L
Sbjct: 335 ISDCRKVFDGMSN--RNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSIL 392
Query: 257 TAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPD 316
A + L G + H ++IK+ N ++GS L+ +Y KC D V +++ D
Sbjct: 393 RACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESR--DAFNVLQQLPSRD 450
Query: 317 LVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVH 376
+V W MISG S SE AL ++M + G P+ ++S AC+N S +G+ +H
Sbjct: 451 VVSWTAMISGCSSLGHESE-ALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIH 509
Query: 377 ALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVE 436
++A K+ SN V V +AL+ MY+KCG + +A RVFD+MPE N VS +MI GYA++G
Sbjct: 510 SIAKKNHALSN-VFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFC 568
Query: 437 GESLQLFELMMQEDIVPNNITFISVLSACA 466
E+L+L M E ++ F ++LS C
Sbjct: 569 REALKLMYRMEAEGFEVDDYIFATILSTCG 598
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 201/416 (48%), Gaps = 27/416 (6%)
Query: 164 LVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVA 223
L+ ++H A+ C N +++ G L A +VF M E ++ ++W AMI
Sbjct: 100 LIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPE--KNTVTWTAMIDG 157
Query: 224 CGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAG-------GMQFHGRMI 276
+ EA LF + V+ G++ M F CL +L G Q HG M+
Sbjct: 158 YLKYGLEDEAFALFEDYVKHGIRFTNERM------FVCLLNLCSRRAEFELGRQVHGNMV 211
Query: 277 KSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSED 336
K G N V S L+ Y++C + ++ F+ + E D++ W +IS S+ +
Sbjct: 212 KVGVG-NLIVESSLVYFYAQCGE--LTSALRAFDMMEEKDVISWTAVISACSR-KGHGIK 267
Query: 337 ALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALV 396
A+ F M F P++ + + ACS + G+QVH+L +K I ++ V V +L+
Sbjct: 268 AIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTD-VFVGTSLM 326
Query: 397 AMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNI 456
MY+KCG + D R+VFD M NTV+ S+I +A+ G E++ LF +M + ++ NN+
Sbjct: 327 DMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNL 386
Query: 457 TFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIET 516
T +S+L AC G + G++ + K IE S +V L + G+ +A +++
Sbjct: 387 TVVSILRACGSVGALLLGKELHAQII-KNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQ 445
Query: 517 MPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ--LEPHNAVPYVMLSNMYASA 570
+P + W A++ C G+ A+ + +Q +EP+ P+ S + A A
Sbjct: 446 LP-SRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPN---PFTYSSALKACA 497
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 158/351 (45%), Gaps = 38/351 (10%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T ++LK C ++ + G+ +H+L +K I ++ +Y+KCG + + R
Sbjct: 286 TVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCR------ 339
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
++FD + + V++ ++IAAHA G A+ LF+
Sbjct: 340 -------------------------KVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFR 374
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVM--QLHCFAVLCGYSCYASVCNAVLARYGGRG 195
+ L + T+ +++AC L++ +LH + + + ++ Y G
Sbjct: 375 IMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCG 434
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASV 255
+A+ V ++ RD +SW AMI C EAL EM++ G++ + FT +S
Sbjct: 435 ESRDAFNVLQQLPS--RDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSA 492
Query: 256 LTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEP 315
L A E L G H K+ N VGS LI MY+KC + + +VF+ + E
Sbjct: 493 LKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGF--VSEAFRVFDSMPEK 550
Query: 316 DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNL 366
+LV W MI G++++ +AL M+ GF DD F+ + S C ++
Sbjct: 551 NLVSWKAMIMGYARN-GFCREALKLMYRMEAEGFEVDDYIFATILSTCGDI 600
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 117/371 (31%), Positives = 188/371 (50%), Gaps = 20/371 (5%)
Query: 359 VTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH 418
+ C + + K VH I S + + +S N+++ MYS CG++ DA VF++MPE
Sbjct: 187 IAQLCGDAQALQEAKVVHEF-ITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPER 245
Query: 419 NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYF 478
N + +I +A++G +++ F QE P+ F + AC G + EG +F
Sbjct: 246 NLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHF 305
Query: 479 NMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGN 538
M +++GI P +H+ +V +L G L+EA R +E+M +P W L+ R HG+
Sbjct: 306 ESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGD 363
Query: 539 VELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQ 598
+ L + + QL+ N + AG ++ L++E+ + G ++
Sbjct: 364 LILGDRCQDMVEQLDASRL-------NKESKAGLVPVKSS--DLVKEKLQRMAKGPNY-- 412
Query: 599 IDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIRWALGKDEDVAAEEKERRL 658
+ A D S P +E++ + + M + GYVP + AL DV E K+ L
Sbjct: 413 ---GIRYMAAGDISRPENRELYMALKSLKEHMIEIGYVPLSKLAL---HDVDQESKDENL 466
Query: 659 LYHSEKLAVAFGLISTKEGVPILVVKNLRICGDCHNAIKLISAISGREITVRDAHRFHCF 718
H+E+ A + T I V+KNLR+C DCHNA+KL+S I GRE+ RDA RFH
Sbjct: 467 FNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHM 526
Query: 719 KEGHCSCKDYW 729
K+G CSC++YW
Sbjct: 527 KDGVCSCREYW 537
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/501 (26%), Positives = 233/501 (46%), Gaps = 43/501 (8%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
+ +N+ K + G HAL IK + +S +L +Y KCG +
Sbjct: 216 SLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVG--------- 266
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
LAR +FDEI DIV + +IA AH A+ LF+
Sbjct: 267 ----------------------LARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFR 304
Query: 138 EA-REAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYAS---VCNAVLARYGG 193
E + + L+ ++ + L + A + Y V + ++ Y
Sbjct: 305 TMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCK 364
Query: 194 RGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMA 253
G ++ RVF+ G R+ ISW A++ +AL M + G + D+ T+A
Sbjct: 365 CGDMASGRRVFY--GSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIA 422
Query: 254 SVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDC-MKVFEEI 312
+VL L + G + H +K+ F N + + L+ MYSKC G+ + +++F+ +
Sbjct: 423 TVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKC---GVPEYPIRLFDRL 479
Query: 313 SEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLG 372
+ ++ W MI + ++ DL + F+ M + RPD + V + CS+L + LG
Sbjct: 480 EQRNVKAWTAMIDCYVENCDL-RAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLG 538
Query: 373 KQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQ 432
K++H +K + S V+ ++ MY KCG+L A FD + +++ ++I Y
Sbjct: 539 KELHGHILKKEFESIPF-VSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGC 597
Query: 433 HGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAK 492
+ + +++ FE M+ PN TF +VLS C+ G V+E ++FN+M + ++P +
Sbjct: 598 NELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEE 657
Query: 493 HFSCMVDLLGRAGKLEEAERI 513
H+S +++LL R G++EEA+R+
Sbjct: 658 HYSLVIELLNRCGRVEEAQRL 678
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 187/372 (50%), Gaps = 14/372 (3%)
Query: 111 PDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLV--MQL 168
P I+ + I A + E + + E R G+ ++ T S +++AC L+ Q+
Sbjct: 76 PYIIHRDIQIFARQNNLEVALTILDYLEQR--GIPVNATTFSALLEACVRRKSLLHGKQV 133
Query: 169 HCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMI---VACG 225
H + G + ++ Y G + +A +VF E + SWNA++ V G
Sbjct: 134 HVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSS--NVYSWNALLRGTVISG 191
Query: 226 QCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPH 285
+ R ++ L F EM +G+ ++++++++V +F L G++ H IK+G +
Sbjct: 192 KKRY-QDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVF 250
Query: 286 VGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDM- 344
+ + L+DMY KC G+ +VF+EI E D+V+W MI+G + H +AL F+ M
Sbjct: 251 LKTSLVDMYFKCGKVGL--ARRVFDEIVERDIVVWGAMIAGLA-HNKRQWEALGLFRTMI 307
Query: 345 QRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGN 404
P+ + + ++ + LGK+VHA +KS + V++ L+ +Y KCG+
Sbjct: 308 SEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGD 367
Query: 405 LHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSA 464
+ RRVF + N +S ++++GYA +G ++L+ M QE P+ +T +VL
Sbjct: 368 MASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPV 427
Query: 465 CAHTGKVEEGQK 476
CA +++G++
Sbjct: 428 CAELRAIKQGKE 439
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 161/320 (50%), Gaps = 16/320 (5%)
Query: 233 ALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLID 292
AL + + + G+ ++ T +++L A + L G Q H + +G N + + L+
Sbjct: 95 ALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVH 154
Query: 293 MYSKCAPRGMLDCMKVFEEISEPDLVLWN-----TMISGFSQHEDLSEDALICFQDMQRA 347
MY+ C + D KVF+E + ++ WN T+ISG +++D+ L F +M+
Sbjct: 155 MYTACG--SVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDV----LSTFTEMREL 208
Query: 348 GFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHD 407
G + S S V + + S+ G + HALAIK+ + N V + +LV MY KCG +
Sbjct: 209 GVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGL-FNSVFLKTSLVDMYFKCGKVGL 267
Query: 408 ARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQED-IVPNNITFISVLSACA 466
ARRVFD + E + V +MI G A + + E+L LF M+ E+ I PN++ ++L
Sbjct: 268 ARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLG 327
Query: 467 HTGKVEEGQK-YFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIE 525
++ G++ + +++K K +E H S ++DL + G + R+ +I
Sbjct: 328 DVKALKLGKEVHAHVLKSKNYVEQPFVH-SGLIDLYCKCGDMASGRRVFYGSK-QRNAIS 385
Query: 526 WAALLGACRKHGNVELAVKA 545
W AL+ +G + A+++
Sbjct: 386 WTALMSGYAANGRFDQALRS 405
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 6/210 (2%)
Query: 324 ISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSD 383
I F++ +L E AL +++ G + +FS + AC S GKQVH +
Sbjct: 83 IQIFARQNNL-EVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRING 141
Query: 384 IPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVE--GESLQ 441
+ SN + LV MY+ CG++ DA++VFD N S N+++ G G + + L
Sbjct: 142 LESNEF-LRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLS 200
Query: 442 LFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLL 501
F M + + N + +V + A + +G K + + K G+ + +VD+
Sbjct: 201 TFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKT-HALAIKNGLFNSVFLKTSLVDMY 259
Query: 502 GRAGKLEEAERIIETMPFDPGSIEWAALLG 531
+ GK+ A R+ + + + + W A++
Sbjct: 260 FKCGKVGLARRVFDEI-VERDIVVWGAMIA 288
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 113/338 (33%), Positives = 176/338 (52%), Gaps = 33/338 (9%)
Query: 215 ISWNAMIVACGQCREGKEALVLF-GEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHG 273
+WN MI + + +EAL+LF M+ + D FT V+ A + G Q HG
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHG 143
Query: 274 RMIKSGFNWNPHVGSGLIDMYSKCAP----RGMLDCMK---------------------- 307
IK+GF + + L+D+Y KC R + D M
Sbjct: 144 LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDS 203
Query: 308 ---VFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACS 364
VF ++ ++V W MI+ + ++ ++A F+ MQ +P++ + + A +
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYVKNRR-PDEAFQLFRRMQVDDVKPNEFTIVNLLQAST 262
Query: 365 NLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLN 424
L S S+G+ VH A K+ + + AL+ MYSKCG+L DAR+VFD M + + N
Sbjct: 263 QLGSLSMGRWVHDYAHKNGFVLD-CFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWN 321
Query: 425 SMITGYAQHGVEGESLQLFELMMQE-DIVPNNITFISVLSACAHTGKVEEGQKYFNMMKE 483
SMIT HG E+L LFE M +E + P+ ITF+ VLSACA+TG V++G +YF M +
Sbjct: 322 SMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
Query: 484 KFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDP 521
+GI P +H +CM+ LL +A ++E+A ++E+M DP
Sbjct: 382 VYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDP 419
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 136/360 (37%), Gaps = 76/360 (21%)
Query: 270 QFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQ 329
Q H ++IK + + LI + S VF ++ P WN MI S
Sbjct: 38 QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASL--VFNQLQSPSTFTWNLMIRSLSV 95
Query: 330 HEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRV 389
+ E L+ M + D +F V AC SS LG QVH LAIK+ N V
Sbjct: 96 NHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGF-FNDV 154
Query: 390 SVNNALVAMYSKCGNLHDARRVFD-------------------------------TMPEH 418
N L+ +Y KCG R+VFD MP
Sbjct: 155 FFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMR 214
Query: 419 NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYF 478
N VS +MIT Y ++ E+ QLF M +D+ PN T +++L A G + G ++
Sbjct: 215 NVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMG-RWV 273
Query: 479 NMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETM--------------------- 517
+ K G + + ++D+ + G L++A ++ + M
Sbjct: 274 HDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCG 333
Query: 518 --------------PFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ------LEPHNA 557
+P +I + +L AC GNV+ ++ + +Q + HNA
Sbjct: 334 EEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNA 393
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 153/379 (40%), Gaps = 74/379 (19%)
Query: 22 LLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPN 81
L+ C + S K +H IK + + L + S G A F +P+
Sbjct: 26 FLRTC---SNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPS 82
Query: 82 VFSYNAIIDA-CVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
F++N +I + V H PR ++ + ++ +H +
Sbjct: 83 TFTWNLMIRSLSVNHK------------PREALLLFILMMISHQSQ-------------- 116
Query: 141 EAGLCLDGFTLSGVIKAC--REDVGLVMQLHCFAVLCGYSCYASVCNAVLARY------- 191
D FT VIKAC + L Q+H A+ G+ N ++ Y
Sbjct: 117 -----FDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPD 171
Query: 192 ---------GGRGLLS---------------EAWRVFHEMGEGCRDEISWNAMIVACGQC 227
GR ++S A VF++M R+ +SW AMI A +
Sbjct: 172 SGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMP--MRNVVSWTAMITAYVKN 229
Query: 228 REGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVG 287
R EA LF M +K + FT+ ++L A T L L+ G H K+GF + +G
Sbjct: 230 RRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLG 289
Query: 288 SGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICF-QDMQR 346
+ LIDMYSKC + D KVF+ + L WN+MI+ H E+AL F + +
Sbjct: 290 TALIDMYSKCG--SLQDARKVFDVMQGKSLATWNSMITSLGVH-GCGEEALSLFEEMEEE 346
Query: 347 AGFRPDDCSFSCVTSACSN 365
A PD +F V SAC+N
Sbjct: 347 ASVEPDAITFVGVLSACAN 365
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 128/263 (48%), Gaps = 5/263 (1%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
TF ++K C++ I G +H L IK + + N LY KCG D+ R F
Sbjct: 121 TFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKM 180
Query: 78 NNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFK 137
++ S+ ++ V +S L A +F+++P ++VS+ +I A+ A +LF+
Sbjct: 181 PGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFR 240
Query: 138 EAREAGLCLDGFTLSGVIKACREDVGLVM--QLHCFAVLCGYSCYASVCNAVLARYGGRG 195
+ + + FT+ +++A + L M +H +A G+ + A++ Y G
Sbjct: 241 RMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCG 300
Query: 196 LLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMG-MKIDMFTMAS 254
L +A +VF M +G + +WN+MI + G G+EAL LF EM ++ D T
Sbjct: 301 SLQDARKVFDVM-QG-KSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVG 358
Query: 255 VLTAFTCLEDLAGGMQFHGRMIK 277
VL+A ++ G+++ RMI+
Sbjct: 359 VLSACANTGNVKDGLRYFTRMIQ 381
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 12/242 (4%)
Query: 349 FRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDA 408
FR + S+ T CSN S KQ+H IK ++ ++++ V L+++ S G A
Sbjct: 18 FRSPEASYFLRT--CSNFSQL---KQIHTKIIKHNLTNDQLLVRQ-LISVSSSFGETQYA 71
Query: 409 RRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMM-QEDIVPNNITFISVLSACAH 467
VF+ + +T + N MI + + E+L LF LMM + TF V+ AC
Sbjct: 72 SLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLA 131
Query: 468 TGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWA 527
+ + G + + K G + + ++DL + GK + ++ + MP + W
Sbjct: 132 SSSIRLGTQVHG-LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMP-GRSIVSWT 189
Query: 528 ALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERG 587
+L + ++ A N Q+ N V + + Y R +E+ + R M+
Sbjct: 190 TMLYGLVSNSQLDSAEIVFN---QMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDD 246
Query: 588 VK 589
VK
Sbjct: 247 VK 248
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 211/452 (46%), Gaps = 88/452 (19%)
Query: 86 NAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLC 145
N I+D VKH + AR++FD+I + +N +I+ + G A +LF E +
Sbjct: 140 NVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVV 199
Query: 146 LDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFH 205
++G +A V + L A + F
Sbjct: 200 SWTVMITG--------------------------FAKVKD-----------LENARKYFD 222
Query: 206 EMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDL 265
M E + +SWNAM+ Q ++AL LF +M+R+G++ + T V++A + D
Sbjct: 223 RMPE--KSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADP 280
Query: 266 AGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEI-SEPDLVLWNTMI 324
+ + + N V + L+DM++KC R + ++F E+ ++ +LV WN MI
Sbjct: 281 SLTRSLVKLIDEKRVRLNCFVKTALLDMHAKC--RDIQSARRIFNELGTQRNLVTWNAMI 338
Query: 325 SGFSQHEDLSE----------------DALIC--------------FQDMQRAG-FRPDD 353
SG+++ D+S ++LI F+DM G +PD+
Sbjct: 339 SGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDE 398
Query: 354 CSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNA----LVAMYSKCGNLHDAR 409
+ V SAC +++ LG I I N++ +N++ L+ MY++ GNL +A+
Sbjct: 399 VTMISVLSACGHMADLELGD-----CIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAK 453
Query: 410 RVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTG 469
RVFD M E + VS N++ T +A +G E+L L M E I P+ +T+ SVL+AC G
Sbjct: 454 RVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAG 513
Query: 470 KVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLL 501
++EGQ+ F ++ P A H++CM DLL
Sbjct: 514 LLKEGQRIFKSIR-----NPLADHYACM-DLL 539
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 205/463 (44%), Gaps = 81/463 (17%)
Query: 88 IIDACVK-HSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCL 146
II C + + + R +FD + P++ N++ + +RL+++ G+
Sbjct: 45 IISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMP 104
Query: 147 DGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHE 206
D F+ VIK+ G++ Q G+ V N ++ Y + A +VF +
Sbjct: 105 DAFSFPVVIKSAGR-FGILFQ--ALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQ 161
Query: 207 MGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLA 266
+ + R WN MI + +EA LF M + D+ + ++T F ++DL
Sbjct: 162 ISQ--RKGSDWNVMISGYWKWGNKEEACKLFDMMP----ENDVVSWTVMITGFAKVKDLE 215
Query: 267 GGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISG 326
++ RM E +V WN M+SG
Sbjct: 216 NARKYFDRM-------------------------------------PEKSVVSWNAMLSG 238
Query: 327 FSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALA------- 379
++Q+ +EDAL F DM R G RP++ ++ V SACS + PSL + + L
Sbjct: 239 YAQN-GFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRL 297
Query: 380 ---IKS----------DIPSNRVSVN-----------NALVAMYSKCGNLHDARRVFDTM 415
+K+ DI S R N NA+++ Y++ G++ AR++FDTM
Sbjct: 298 NCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTM 357
Query: 416 PEHNTVSLNSMITGYAQHGVEGESLQLFELMMQE-DIVPNNITFISVLSACAHTGKVEEG 474
P+ N VS NS+I GYA +G +++ FE M+ D P+ +T ISVLSAC H +E G
Sbjct: 358 PKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELG 417
Query: 475 QKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETM 517
+ ++ K I+ + ++ + R G L EA+R+ + M
Sbjct: 418 DCIVDYIR-KNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEM 459
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 153/350 (43%), Gaps = 40/350 (11%)
Query: 61 YSKCGTLDNARTSFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLI 120
Y K G + A F + +V S+ +I K L AR+ FD +P +VS+N ++
Sbjct: 177 YWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAML 236
Query: 121 AAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKAC--REDVGLV-----------MQ 167
+ +A G A+RLF + G+ + T VI AC R D L ++
Sbjct: 237 SGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVR 296
Query: 168 LHCFAVLCGYSCYAS---------------------VCNAVLARYGGRGLLSEAWRVFHE 206
L+CF +A NA+++ Y G +S A ++F
Sbjct: 297 LNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDT 356
Query: 207 MGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMG-MKIDMFTMASVLTAFTCLEDL 265
M + R+ +SWN++I + A+ F +M+ G K D TM SVL+A + DL
Sbjct: 357 MPK--RNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADL 414
Query: 266 AGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMIS 325
G + K+ N LI MY++ + + +VF+E+ E D+V +NT+ +
Sbjct: 415 ELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGG--NLWEAKRVFDEMKERDVVSYNTLFT 472
Query: 326 GFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQV 375
F+ + D E L M+ G PD +++ V +AC+ G+++
Sbjct: 473 AFAANGDGVE-TLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRI 521
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 152/357 (42%), Gaps = 56/357 (15%)
Query: 218 NAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAG--GMQFHGRM 275
N+M + + L L+ + R G+ D F+ V+ + AG G+ F +
Sbjct: 75 NSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKS-------AGRFGILFQALV 127
Query: 276 IKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSE 335
K GF +P+V + ++DMY K + KVF++IS+ WN MISG+ +
Sbjct: 128 EKLGFFKDPYVRNVIMDMYVK--HESVESARKVFDQISQRKGSDWNVMISGYWK------ 179
Query: 336 DALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNAL 395
G + A + +P N V +
Sbjct: 180 -----------------------------------WGNKEEACKLFDMMPENDVVSWTVM 204
Query: 396 VAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNN 455
+ ++K +L +AR+ FD MPE + VS N+M++GYAQ+G ++L+LF M++ + PN
Sbjct: 205 ITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNE 264
Query: 456 ITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIE 515
T++ V+SAC+ + ++ EK + + ++D+ + ++ A RI
Sbjct: 265 TTWVIVISACSFRADPSLTRSLVKLIDEK-RVRLNCFVKTALLDMHAKCRDIQSARRIFN 323
Query: 516 TMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGR 572
+ + W A++ + G++ A F + N V + L YA G+
Sbjct: 324 ELGTQRNLVTWNAMISGYTRIGDMS---SARQLFDTMPKRNVVSWNSLIAGYAHNGQ 377
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 131/269 (48%), Gaps = 18/269 (6%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSF-RL 76
T+ ++ C + D S +SL L + + + ++ +++KC + +AR F L
Sbjct: 266 TWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL 325
Query: 77 TNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLF 136
N+ ++NA+I + + AR+LFD +P+ ++VS+N+LIA +AH G+ A+ F
Sbjct: 326 GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFF 385
Query: 137 KEAREAGLCL-DGFTLSGVIKACREDVGLVMQLHCFAVLCGY------SCYASVCNAVLA 189
++ + G D T+ V+ AC G + L + Y S +++
Sbjct: 386 EDMIDYGDSKPDEVTMISVLSAC----GHMADLELGDCIVDYIRKNQIKLNDSGYRSLIF 441
Query: 190 RYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDM 249
Y G L EA RVF EM E RD +S+N + A +G E L L +M G++ D
Sbjct: 442 MYARGGNLWEAKRVFDEMKE--RDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDR 499
Query: 250 FTMASVLTAFTCLEDLAGGMQFHGRMIKS 278
T SVLTA C + AG ++ R+ KS
Sbjct: 500 VTYTSVLTA--C--NRAGLLKEGQRIFKS 524
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 308 VFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLS 367
+F+ ++ P++ + N+M FS+ D++ D L ++ R G PD SF V S
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKM-DMANDVLRLYEQRSRCGIMPDAFSFPVVIK-----S 115
Query: 368 SPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMI 427
+ G AL K + V N ++ MY K ++ AR+VFD + + N MI
Sbjct: 116 AGRFGILFQALVEKLGFFKDPY-VRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMI 174
Query: 428 TGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGI 487
+GY + G + E+ +LF++M + D+V ++ +++ A +E +KYF+ M EK
Sbjct: 175 SGYWKWGNKEEACKLFDMMPENDVV----SWTVMITGFAKVKDLENARKYFDRMPEK--- 227
Query: 488 EPEAKHFSCMVDLLGRAGKLEEAERIIETM---PFDPGSIEWAALLGAC 533
++ M+ + G E+A R+ M P W ++ AC
Sbjct: 228 --SVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISAC 274
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 168/340 (49%), Gaps = 20/340 (5%)
Query: 393 NALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIV 452
+ ++ MYS C + DA VF+ MP+ N+ + +MI A++G ++ +F ++E
Sbjct: 147 HTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNK 206
Query: 453 PNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAER 512
P+ F +V AC G + EG +F M +G+ + + ++++L G L+EA
Sbjct: 207 PDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALD 266
Query: 513 IIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGR 572
+E M +P W L+ C G +EL + A +L+ SN A +
Sbjct: 267 FVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKE---SNAGLVAAK 323
Query: 573 WEESATVKRLMRERGVKKKPGCSWIQIDNK--VHVFVAEDSSH-PMIKEIHEYMGEMLRK 629
+SA K +K+ C I+ D K +H F A D+SH + +ML
Sbjct: 324 ASDSAMEK-------LKELRYCQMIRDDPKKRMHEFRAGDTSHLGTVSAFRSLKVQML-- 374
Query: 630 MKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLRIC 689
G+VP R V EEKE +LL+ S KLA A +I+++ P+ V++N+R C
Sbjct: 375 --DIGFVPATRVCFVT---VEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMRTC 429
Query: 690 GDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
D HN K+IS I+GR + RD ++H +K G CSCKDYW
Sbjct: 430 IDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 238/507 (46%), Gaps = 35/507 (6%)
Query: 109 PRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACRED--VGLVM 166
P P++V++ TLI RGE A LFK + G+ D S +I + +G+
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 167 QLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEM-GEGCRDEISWNAMIVACG 225
+L A+ G V ++ + Y G L+ A V+ M +G + +++ G
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK-G 400
Query: 226 QCREGK--EALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWN 283
C++G+ EA ++G++++ GM+ + T +S++ F +L G + MIK G+ +
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 284 PHVGSGLIDMYSK--CAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICF 341
+ L+D SK M +K+ + ++V++N++I G+ + E AL F
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDE-ALKVF 519
Query: 342 QDMQRAGFRPDDCSFSCVTSA-------CSNLSSPSLGKQVHALAIKSDIPSNRVSVNNA 394
+ M G +PD +F+ V C ++ P++G Q+ L ++ I ++ ++V N
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMK-PTIGLQLFDLMQRNKISAD-IAVCNV 577
Query: 395 LVAMYSKCGNLHDARRVFDTMPEH----NTVSLNSMITGYAQHGVEGESLQLFELMMQED 450
++ + KC + DA + F+ + E + V+ N+MI GY E+ ++FEL+
Sbjct: 578 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 637
Query: 451 IVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEA 510
PN +T ++ ++ + F++M EK G +P A + C++D ++ +E +
Sbjct: 638 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK-GSKPNAVTYGCLMDWFSKSVDIEGS 696
Query: 511 ERIIETMP---FDPGSIEWAALLGACRKHGNVELAVKAANKFLQ-----LEPHNAVPYVM 562
++ E M P + ++ ++ K G V+ +A N F Q L P + V Y +
Sbjct: 697 FKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD---EATNIFHQAIDAKLLP-DVVAYAI 752
Query: 563 LSNMYASAGRWEESATVKRLMRERGVK 589
L Y GR E+A + M GVK
Sbjct: 753 LIRGYCKVGRLVEAALLYEHMLRNGVK 779
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 141/354 (39%), Gaps = 67/354 (18%)
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNW---------------NPHVGSGLIDMYSKCAP 299
VL A C ++ + FH +++ GF V S L+ + C P
Sbjct: 223 VLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGP 282
Query: 300 RGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCV 359
P++V + T+I+GF + ++ + A F+ M++ G PD ++S +
Sbjct: 283 --------------APNVVTFCTLINGFCKRGEM-DRAFDLFKVMEQRGIEPDLIAYSTL 327
Query: 360 TSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTM---- 415
+G ++ + A+ + + V V ++ + +Y K G+L A V+ M
Sbjct: 328 IDGYFKAGMLGMGHKLFSQALHKGVKLD-VVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 416 PEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQ 475
N V+ +I G Q G E+ ++ +++ + P+ +T+ S++ G + G
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 476 KYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRK 535
+ M K G P+ + +VD L + G + A R
Sbjct: 447 ALYEDMI-KMGYPPDVVIYGVLVDGLSKQGLMLHAMR----------------------- 482
Query: 536 HGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVK 589
+VK + ++L N V + L + + R++E+ V RLM G+K
Sbjct: 483 -----FSVKMLGQSIRL---NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 101/496 (20%), Positives = 195/496 (39%), Gaps = 108/496 (21%)
Query: 61 YSKCGTLDNARTSFRLTNN----PNVFSYNAIIDACVKHSHLHLARELFDEI----PRPD 112
+ K G +D A F++ P++ +Y+ +ID K L + +LF + + D
Sbjct: 296 FCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 355
Query: 113 IVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACRED------VGLVM 166
+V +++ I + G+ A ++K G+ + T + +IK +D G+
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 167 QL--------------------HCFAVLCGYSCYAS-----------VCNAVLARYGGRG 195
Q+ C + G++ Y + ++ +G
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 196 LLSEAWRVFHEM-GEGCR-DEISWNAMIVACGQCREGK--EALVLFGEMVRMGMKIDMFT 251
L+ A R +M G+ R + + +N++I G CR + EAL +F M G+K D+ T
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLI--DGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 252 MASVLTAFTCLEDL-------AGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD 304
+V+ + +ED G+Q M ++ + + V + +I + KC + D
Sbjct: 534 FTTVMRV-SIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC--HRIED 590
Query: 305 CMKVFEEI----SEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVT 360
K F + EPD+V +NTMI G+ L E I F+ ++ F P+ + + +
Sbjct: 591 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI-FELLKVTPFGPNTVTLTILI 649
Query: 361 SA-CSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH- 418
C N + +A K P N V+ L+ +SK ++ + ++F+ M E
Sbjct: 650 HVLCKNNDMDGAIRMFSIMAEKGSKP-NAVTYG-CLMDWFSKSVDIEGSFKLFEEMQEKG 707
Query: 419 --------------------------------------NTVSLNSMITGYAQHGVEGESL 440
+ V+ +I GY + G E+
Sbjct: 708 ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA 767
Query: 441 QLFELMMQEDIVPNNI 456
L+E M++ + P+++
Sbjct: 768 LLYEHMLRNGVKPDDL 783
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 123/312 (39%), Gaps = 32/312 (10%)
Query: 297 CAPRGMLD-CMKVFEEISEPDLV--------LWNTMISGFSQHEDLSEDALICFQDMQRA 347
C GM+D +++F ++ +V + N++I S DL D F + R
Sbjct: 156 CCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIG--SDRVDLIADH---FDKLCRG 210
Query: 348 GFRPDDCS---FSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGN 404
G P S F C + +L H L ++ VS N L +
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKAL--DFHRLVMERGFRVGIVSCNKVLKGL--SVDQ 266
Query: 405 LHDARR----VFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFIS 460
+ A R V D P N V+ ++I G+ + G + LF++M Q I P+ I + +
Sbjct: 267 IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYST 326
Query: 461 VLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETM--- 517
++ G + G K F+ K G++ + FS +D+ ++G L A + + M
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHK-GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 518 PFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ--LEPHNAVPYVMLSNMYASAGRWEE 575
P + + L+ + G + A + L+ +EP + V Y L + + G
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP-SIVTYSSLIDGFCKCGNLRS 444
Query: 576 SATVKRLMRERG 587
+ M + G
Sbjct: 445 GFALYEDMIKMG 456
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 127/534 (23%), Positives = 240/534 (44%), Gaps = 33/534 (6%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAVRL 135
PNV ++ +I+ K + A +LF + + PD+++Y+TLI + G G +L
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 136 FKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFA-VLC-GYSCYASVCNAVLARYGG 193
F +A G+ LD S I + L + +LC G S ++
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 194 RGLLSEAWRVFHE-MGEGCRDEI-SWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFT 251
G + EA+ ++ + + G I +++++I +C + L+ +M++MG D+
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEE 311
++ + + M+F +M+ N V + LID + C + +KVF
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW--CRLNRFDEALKVFRL 521
Query: 312 IS----EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLS 367
+ +PD+ + T++ S E E+AL F M + G PD ++ + A
Sbjct: 522 MGIYGIKPDVATFTTVMR-VSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHM 580
Query: 368 SPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPE----HNTVSL 423
P++G Q+ L ++ I ++ ++V N ++ + KC + DA + F+ + E + V+
Sbjct: 581 KPTIGLQLFDLMQRNKISAD-IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTY 639
Query: 424 NSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKE 483
N+MI GY E+ ++FEL+ PN +T ++ ++ + F++M E
Sbjct: 640 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 699
Query: 484 KFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMP---FDPGSIEWAALLGACRKHGNVE 540
K G +P A + C++D ++ +E + ++ E M P + ++ ++ K G V+
Sbjct: 700 K-GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 758
Query: 541 LAVKAANKFLQ-----LEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVK 589
+A N F Q L P + V Y +L Y GR E+A + M GVK
Sbjct: 759 ---EATNIFHQAIDAKLLP-DVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 808
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 141/354 (39%), Gaps = 67/354 (18%)
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNW---------------NPHVGSGLIDMYSKCAP 299
VL A C ++ + FH +++ GF V S L+ + C P
Sbjct: 223 VLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGP 282
Query: 300 RGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCV 359
P++V + T+I+GF + ++ + A F+ M++ G PD ++S +
Sbjct: 283 --------------APNVVTFCTLINGFCKRGEM-DRAFDLFKVMEQRGIEPDLIAYSTL 327
Query: 360 TSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTM---- 415
+G ++ + A+ + + V V ++ + +Y K G+L A V+ M
Sbjct: 328 IDGYFKAGMLGMGHKLFSQALHKGVKLD-VVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 416 PEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQ 475
N V+ +I G Q G E+ ++ +++ + P+ +T+ S++ G + G
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 476 KYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRK 535
+ M K G P+ + +VD L + G + A R
Sbjct: 447 ALYEDMI-KMGYPPDVVIYGVLVDGLSKQGLMLHAMR----------------------- 482
Query: 536 HGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVK 589
+VK + ++L N V + L + + R++E+ V RLM G+K
Sbjct: 483 -----FSVKMLGQSIRL---NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 123/312 (39%), Gaps = 32/312 (10%)
Query: 297 CAPRGMLD-CMKVFEEISEPDLV--------LWNTMISGFSQHEDLSEDALICFQDMQRA 347
C GM+D +++F ++ +V + N++I S DL D F + R
Sbjct: 156 CCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIG--SDRVDLIADH---FDKLCRG 210
Query: 348 GFRPDDCS---FSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGN 404
G P S F C + +L H L ++ VS N L +
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKAL--DFHRLVMERGFRVGIVSCNKVLKGL--SVDQ 266
Query: 405 LHDARR----VFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFIS 460
+ A R V D P N V+ ++I G+ + G + LF++M Q I P+ I + +
Sbjct: 267 IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYST 326
Query: 461 VLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETM--- 517
++ G + G K F+ K G++ + FS +D+ ++G L A + + M
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHK-GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 518 PFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ--LEPHNAVPYVMLSNMYASAGRWEE 575
P + + L+ + G + A + L+ +EP + V Y L + + G
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP-SIVTYSSLIDGFCKCGNLRS 444
Query: 576 SATVKRLMRERG 587
+ M + G
Sbjct: 445 GFALYEDMIKMG 456
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 78/102 (76%), Gaps = 3/102 (2%)
Query: 628 RKMKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVPILVVKNLR 687
++++ AGYVP+ ++ L D+ E KE+ L++HSE+LA+AFG+I+T G I V+KNLR
Sbjct: 141 KEVRDAGYVPETKYVL---HDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRVMKNLR 197
Query: 688 ICGDCHNAIKLISAISGREITVRDAHRFHCFKEGHCSCKDYW 729
ICGDCHN IK++S+I REI VRD RFH F++G+CSC DYW
Sbjct: 198 ICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 123/511 (24%), Positives = 224/511 (43%), Gaps = 79/511 (15%)
Query: 61 YSKCGTLDNARTSFRLTNN----PNVFSYNAIIDACVKHS-HLHLARELFDEIPR----P 111
YS+ +D A + L P V SYNA++DA ++ ++ A +F E+ P
Sbjct: 144 YSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSP 203
Query: 112 DIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFT-----LSGVIKACREDVGLVM 166
++ +YN LI G A+ LF + G CL + G K + D G +
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKG-CLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 167 QLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEG--CRDEISWNAMIVAC 224
L A L G N V+ G + E V EM DE+++N +I
Sbjct: 263 -LRSMA-LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIK-- 318
Query: 225 GQCREGK--EALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNW 282
G C+EG +ALV+ EM+R G+ + T S++ + ++ M+F +M G
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP 378
Query: 283 NPHVGSGLIDMYSKCAPRG-MLDCMKVFEEISE----PDLVLWNTMISGFSQHEDLSEDA 337
N + L+D +S+ +G M + +V E+++ P +V +N +I+G + EDA
Sbjct: 379 NERTYTTLVDGFSQ---KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM-EDA 434
Query: 338 LICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVA 397
+ +DM+ G PD S+S V S
Sbjct: 435 IAVLEDMKEKGLSPDVVSYSTVLSG----------------------------------- 459
Query: 398 MYSKCGNLHDARRVFDTMPEH----NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVP 453
+ + ++ +A RV M E +T++ +S+I G+ + E+ L+E M++ + P
Sbjct: 460 -FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 518
Query: 454 NNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERI 513
+ T+ ++++A G +E+ + N M EK G+ P+ +S +++ L + + EA+R+
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEK-GVLPDVVTYSVLINGLNKQSRTREAKRL 577
Query: 514 IETMPFD---PGSIEWAALLGACRKHGNVEL 541
+ + ++ P + + L+ C N+E
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENC---SNIEF 605
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 193/428 (45%), Gaps = 24/428 (5%)
Query: 179 CYA--SVCNAVLARYGGRGLLSEAWRVFH-EMGEGCRDEI-SWNAMIVACGQCREGKE-A 233
CY+ SV + V+ Y L+ +A + H G + S+NA++ A + + A
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189
Query: 234 LVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDM 293
+F EM+ + ++FT ++ F ++ + +M G N + LID
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 249
Query: 294 YSKCAPRGMLDCMKVFEEIS----EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGF 349
Y C R + D K+ ++ EP+L+ +N +I+G + + E + + +M R G+
Sbjct: 250 Y--CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV-LTEMNRRGY 306
Query: 350 RPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDAR 409
D+ +++ + + +HA ++ + + ++ + + +M K GN++ A
Sbjct: 307 SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSM-CKAGNMNRAM 365
Query: 410 RVFDTMPEH----NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSAC 465
D M N + +++ G++Q G E+ ++ M P+ +T+ ++++
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425
Query: 466 AHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMP---FDPG 522
TGK+E+ MKEK G+ P+ +S ++ R+ ++EA R+ M P
Sbjct: 426 CVTGKMEDAIAVLEDMKEK-GLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 484
Query: 523 SIEWAALL-GACRKHGNVELAVKAANKFLQLE-PHNAVPYVMLSNMYASAGRWEESATVK 580
+I +++L+ G C + E A + L++ P + Y L N Y G E++ +
Sbjct: 485 TITYSSLIQGFCEQRRTKE-ACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLH 543
Query: 581 RLMRERGV 588
M E+GV
Sbjct: 544 NEMVEKGV 551
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 165/407 (40%), Gaps = 104/407 (25%)
Query: 80 PNVFSYNAIIDACVKHSHLHLA----RELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRL 135
PN +Y ++D + +++ A RE+ D P +V+YN LI H G+ A+ +
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAV 437
Query: 136 FKEAREAGLCLDGFTLSGVIKA-CRE-DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGG 193
++ +E GL D + S V+ CR DV
Sbjct: 438 LEDMKEKGLSPDVVSYSTVLSGFCRSYDV------------------------------- 466
Query: 194 RGLLSEAWRVFHEMGE-GCR-DEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFT 251
EA RV EM E G + D I+++++I + R KEA L+ EM+R+G+ D FT
Sbjct: 467 ----DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT 522
Query: 252 MASVLTAFTCLE-DLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFE 310
+++ A+ C+E DL +Q H M++ G
Sbjct: 523 YTALINAY-CMEGDLEKALQLHNEMVEKGV------------------------------ 551
Query: 311 EISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPS 370
PD+V ++ +I+G ++ E + + P D ++ + CSN+ S
Sbjct: 552 ---LPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV-PSDVTYHTLIENCSNIEFKS 607
Query: 371 LGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHN----TVSLNSM 426
+ + +K G + +A +VF++M N + N M
Sbjct: 608 VVSLIKGFCMK---------------------GMMTEADQVFESMLGKNHKPDGTAYNIM 646
Query: 427 ITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEE 473
I G+ + G ++ L++ M++ + + +T I+++ A GKV E
Sbjct: 647 IHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 140/296 (47%), Gaps = 19/296 (6%)
Query: 308 VFEEISE----PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSAC 363
VF+E+ E P++ +N +I GF ++ + AL F M+ G P+ +++ +
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNI-DVALTLFDKMETKGCLPNVVTYNTLIDGY 250
Query: 364 SNLSSPSLG-KQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH---- 418
L G K + ++A+K P N +S N ++ + G + + V M
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEP-NLISYN-VVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 419 NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYF 478
+ V+ N++I GY + G ++L + M++ + P+ IT+ S++ + G + ++
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 479 NMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMP---FDPGSIEWAALLGACRK 535
+ M+ + G+ P + ++ +VD + G + EA R++ M F P + + AL+
Sbjct: 369 DQMRVR-GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 536 HGNVELAVKAANKFLQ--LEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVK 589
G +E A+ + L P + V Y + + + + +E+ VKR M E+G+K
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSP-DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 125/570 (21%), Positives = 246/570 (43%), Gaps = 65/570 (11%)
Query: 83 FSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREA 142
S N ++D + + + L E+ P P IV +N L++A A + + L + +
Sbjct: 51 LSRNVLLDLKLDDA-VDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNL 109
Query: 143 GLCLDGFTLSGVIKAC--REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEA 200
+ D ++ + +I R + L + + + GY +++L Y +SEA
Sbjct: 110 RISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 169
Query: 201 WRVFHEM--GEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTA 258
+ +M E + +++N +I + EA+ L MV G + D+FT +V+
Sbjct: 170 VALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG 229
Query: 259 FTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLV 318
D+ + +M K E D+V
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKI---------------------------------EADVV 256
Query: 319 LWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHAL 378
++ T+I +++++ DAL F +M G RP+ +++ + N S ++ +
Sbjct: 257 IYTTIIDALCNYKNVN-DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 315
Query: 379 AIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH----NTVSLNSMITGYAQHG 434
I+ I N V+ + AL+ + K G L +A +++D M + + + +S+I G+ H
Sbjct: 316 MIERKINPNVVTFS-ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 435 VEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHF 494
E+ +FELM+ +D PN +T+ +++ +VEEG + F M ++ G+ +
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTY 433
Query: 495 SCMVDLLGRAGKLEEAERIIETMPFD---PGSIEWAALLGACRKHGNVELAVKAANKFLQ 551
+ ++ L +AG + A++I + M D P I ++ LL K+G +E A+ ++LQ
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL-VVFEYLQ 492
Query: 552 ---LEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVA 608
+EP +M+ M AG+ E+ + + +GVK V ++
Sbjct: 493 KSKMEPDIYTYNIMIEGM-CKAGKVEDGWDLFCSLSLKGVKP-----------NVIIYTT 540
Query: 609 EDSSHPMIKEIHEYMGEMLRKMKQAGYVPD 638
S K + E + R+MK+ G +P+
Sbjct: 541 MISGFCR-KGLKEEADALFREMKEDGTLPN 569
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 118/539 (21%), Positives = 223/539 (41%), Gaps = 70/539 (12%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIPRP----DIVSYNTLIAAHAHRGEHGPAVRL 135
P++ +N ++ A K + L L + + D+ SYN LI R + A+ +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 136 FKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
+ + G D TLS ++L GY +G R
Sbjct: 138 LGKMMKLGYEPDIVTLS-------------------SLLNGYC------------HGKR- 165
Query: 196 LLSEAWRVFHEM--GEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMA 253
+SEA + +M E + +++N +I + EA+ L MV G + D+FT
Sbjct: 166 -ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 224
Query: 254 SVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEIS 313
+V+ D+ + +M K + + + +ID + C + + D + +F E+
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIID--ALCNYKNVNDALNLFTEMD 282
Query: 314 ----EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSP 369
P++V +N++I + S DA DM P+ +FS + A
Sbjct: 283 NKGIRPNVVTYNSLIRCLCNYGRWS-DASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Query: 370 SLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH----NTVSLNS 425
++++ IK I + + ++L+ + L +A+ +F+ M N V+ N+
Sbjct: 342 VEAEKLYDEMIKRSIDPD-IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 426 MITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKF 485
+I G+ + E ++LF M Q +V N +T+ +++ G + QK F M
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD- 459
Query: 486 GIEPEAKHFSCMVDLLGRAGKLEEAERIIETM---PFDPGSIEWAALLGACRKHGNVE-- 540
G+ P+ +S ++D L + GKLE+A + E + +P + ++ K G VE
Sbjct: 460 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 519
Query: 541 ------LAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPG 593
L++K ++P N + Y + + + G EE+ + R M+E G G
Sbjct: 520 WDLFCSLSLKG------VKP-NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSG 571
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 199/455 (43%), Gaps = 26/455 (5%)
Query: 74 FRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIP----RPDIVSYNTLIAAHAHRGEH 129
F + PN ++N +I H+ A L D + +PD+ +Y T++ RG+
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 130 GPAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVC--NAV 187
A+ L K+ + + D + +I A + L+ F + +V N++
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 188 LARYGGRGLLSEAWRVFHEMGEGCRDE--ISWNAMIVACGQCREGK--EALVLFGEMVRM 243
+ G S+A R+ +M E + ++++A+I A +EGK EA L+ EM++
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF--VKEGKLVEAEKLYDEMIKR 354
Query: 244 GMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGML 303
+ D+FT +S++ F + L MI N + LI + C + +
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF--CKAKRVE 412
Query: 304 DCMKVFEEISEPDLV----LWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCV 359
+ M++F E+S+ LV +NT+I G Q D + A F+ M G PD ++S +
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD-CDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 360 TSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP--- 416
V KS + + + N ++ K G + D +F ++
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPD-IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 417 -EHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQ 475
+ N + +MI+G+ + G++ E+ LF M ++ +PN+ T+ +++ A G
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASA 590
Query: 476 KYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEA 510
+ M+ G +A S ++++L G+LE++
Sbjct: 591 ELIKEMRS-CGFVGDASTISMVINML-HDGRLEKS 623
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 130/578 (22%), Positives = 253/578 (43%), Gaps = 72/578 (12%)
Query: 83 FSYNAIIDACVKHSHLHL----ARELFDEI----PRPDIVSYNTLIAAHAHRGEHGPAVR 134
SY+ + +++ LHL A +LF E+ P P IV ++ L++A A + +
Sbjct: 27 LSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVIS 86
Query: 135 LFKEAREAGLCLDGFTLSGVIKAC--REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYG 192
++ G+ + +T + +I R + + + + GY N++L +
Sbjct: 87 FGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFC 146
Query: 193 GRGLLSEAWRVFHEMGE-GCR-DEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMF 250
+SEA + +M E G + D +++ ++ Q + EA+ L MV G + D+
Sbjct: 147 HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV 206
Query: 251 TMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFE 310
T +V+ + K G P + L++ K
Sbjct: 207 TYGAVING----------------LCKRG---EPDLALNLLNKMEKGKI----------- 236
Query: 311 EISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPS 370
E D+V+++T+I ++ + +DAL F +M G RPD ++S + S N S
Sbjct: 237 ---EADVVIYSTVIDSLCKYRHV-DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS 292
Query: 371 LGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH----NTVSLNSM 426
++ + ++ I N V+ N +L+ ++K G L +A ++FD M + N V+ NS+
Sbjct: 293 DASRLLSDMLERKINPNVVTFN-SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351
Query: 427 ITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFG 486
I G+ H E+ Q+F LM+ +D +P+ +T+ ++++ KV +G + F M + G
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR-G 410
Query: 487 IEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFD---PGSIEWAALLGACRKHGNVELAV 543
+ ++ ++ +A + A+ + + M D P + + LL K+G +E A+
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Query: 544 KAANKFLQ---LEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQID 600
++LQ +EP + Y ++S AG+ E+ + + +GVK I +
Sbjct: 471 -VVFEYLQKSKMEP-DIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP----DVIAYN 524
Query: 601 NKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPD 638
+ F K + E + KMK+ G +PD
Sbjct: 525 TMISGFCK--------KGLKEEAYTLFIKMKEDGPLPD 554
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/481 (22%), Positives = 214/481 (44%), Gaps = 32/481 (6%)
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAVRLF 136
N+++YN +I+ + S L A + ++ + P IV+ N+L+ H AV L
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158
Query: 137 KEAREAGLCLDGFTLSGVI------KACREDVGLVMQLHCFAVLCGYSCYASVCNAVLAR 190
+ E G D T + ++ E V LV ++ Y +V N +
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK- 217
Query: 191 YGGRGLLSEAWRVFHEMGEGC--RDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKID 248
RG A + ++M +G D + ++ +I + + R +AL LF EM G++ D
Sbjct: 218 ---RGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274
Query: 249 MFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKV 308
+FT +S+++ + + M++ N N + LID ++K +++ K+
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK--LIEAEKL 332
Query: 309 FEEISE----PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACS 364
F+E+ + P++V +N++I+GF H+ L E I F M PD +++ + +
Sbjct: 333 FDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI-FTLMVSKDCLPDVVTYNTLINGFC 391
Query: 365 NLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH----NT 420
G ++ + + N V+ L+ + + + +A+ VF M N
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTY-TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450
Query: 421 VSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNM 480
++ N+++ G ++G +++ +FE + + + P+ T+ + GKVE+G F
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510
Query: 481 MKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFD---PGSIEWAALLGACRKHG 537
+ K G++P+ ++ M+ + G EEA + M D P S + L+ A + G
Sbjct: 511 LSLK-GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Query: 538 N 538
+
Sbjct: 570 D 570
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 124/556 (22%), Positives = 241/556 (43%), Gaps = 68/556 (12%)
Query: 101 ARELFDEI----PRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIK 156
A +LF ++ P P IV +N L++A A + + L ++ + G+ D +T S I
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 157 AC--REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGE-GCR- 212
R + L + + + GY +++L Y +S+A + +M E G +
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 213 DEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFH 272
D ++ +I + EA+ L +MV+ G + D+ T +V+ D+ +
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 273 GRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHED 332
+M K E D+V++NT+I G +++
Sbjct: 247 KKMEKGKI---------------------------------EADVVIYNTIIDGLCKYKH 273
Query: 333 LSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVN 392
+ +DAL F +M G RPD ++S + S N S ++ + I+ I N V+ +
Sbjct: 274 M-DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFS 332
Query: 393 NALVAMYSKCGNLHDARRVFDTMPEH----NTVSLNSMITGYAQHGVEGESLQLFELMMQ 448
AL+ + K G L +A +++D M + + + +S+I G+ H E+ +FELM+
Sbjct: 333 -ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 391
Query: 449 EDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLE 508
+D PN +T+ +++ +VEEG + F M ++ G+ ++ ++ +A +
Sbjct: 392 KDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYTTLIHGFFQARDCD 450
Query: 509 EAERIIETM---PFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ---LEPHNAVPYVM 562
A+ + + M P + + LL K+G + A+ ++LQ +EP +M
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM-VVFEYLQRSTMEPDIYTYNIM 509
Query: 563 LSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEY 622
+ M AG+ E+ + + +GV + I + + F + S E
Sbjct: 510 IEGM-CKAGKVEDGWELFCNLSLKGVSP----NVIAYNTMISGFCRKGS--------KEE 556
Query: 623 MGEMLRKMKQAGYVPD 638
+L+KMK+ G +P+
Sbjct: 557 ADSLLKKMKEDGPLPN 572
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 193/452 (42%), Gaps = 67/452 (14%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAVRL 135
P++ +Y +++ K + LA L ++ + D+V YNT+I A+ L
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNL 280
Query: 136 FKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
F E G+ D FT S +I + LC Y G
Sbjct: 281 FTEMDNKGIRPDVFTYSSLI----------------SCLCNY-----------------G 307
Query: 196 LLSEAWRVFHEMGEGCRDE--ISWNAMIVACGQCREGK--EALVLFGEMVRMGMKIDMFT 251
S+A R+ +M E + ++++A+I A +EGK EA L+ EM++ + D+FT
Sbjct: 308 RWSDASRLLSDMIERKINPNVVTFSALIDAF--VKEGKLVEAEKLYDEMIKRSIDPDIFT 365
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEE 311
+S++ F + L MI N S LI + C + + + M++F E
Sbjct: 366 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF--CKAKRVEEGMELFRE 423
Query: 312 ISEPDLV----LWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSA-CSNL 366
+S+ LV + T+I GF Q D ++A + F+ M G P+ +++ + C N
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARD-CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN- 481
Query: 367 SSPSLGKQVHALAI----KSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP----EH 418
GK A+ + + + N ++ K G + D +F +
Sbjct: 482 -----GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSP 536
Query: 419 NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYF 478
N ++ N+MI+G+ + G + E+ L + M ++ +PN+ T+ +++ A G E +
Sbjct: 537 NVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELI 596
Query: 479 NMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEA 510
M+ G +A + ++L G+L+++
Sbjct: 597 KEMRS-CGFAGDASTIGLVTNML-HDGRLDKS 626
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 126/294 (42%), Gaps = 46/294 (15%)
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAVR 134
NPNV +++A+IDA VK L A +L+DE+ + PDI +Y++LI
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI-------------- 370
Query: 135 LFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGR 194
+GF + + + L++ CF + YS ++ +
Sbjct: 371 ------------NGFCMHDRLDEAKHMFELMISKDCFPNVVTYS-------TLIKGFCKA 411
Query: 195 GLLSEAWRVFHEMGEG--CRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTM 252
+ E +F EM + + +++ +I Q R+ A ++F +MV +G+ ++ T
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEI 312
+L LA M + +S P + + I + C + D ++F +
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRS--TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 313 S----EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSA 362
S P+++ +NTMISGF + E+A + M+ G P+ +++ + A
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGS-KEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/511 (22%), Positives = 212/511 (41%), Gaps = 89/511 (17%)
Query: 61 YSKCGTLDNARTSFR----LTNNPNVFSYNAIIDACVKHSHLHLARELFDEIP----RPD 112
++K G D+ + F+ P VF+YN +ID K + AR LF+E+ PD
Sbjct: 237 FAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPD 296
Query: 113 IVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFA 172
V+YN++I G V F+E ++ +C C DV
Sbjct: 297 TVTYNSMIDGFGKVGRLDDTVCFFEEMKD--MC------------CEPDV---------- 332
Query: 173 VLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEM-GEGCR-DEISWNAMIVACGQCREG 230
NA++ + G L + EM G G + + +S++ ++ A C+EG
Sbjct: 333 ---------ITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAF--CKEG 381
Query: 231 --KEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGS 288
++A+ + +M R+G+ + +T S++ A + +L+ + M++ G WN +
Sbjct: 382 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 441
Query: 289 GLIDMYSKCAPRGMLDCMKVFEEISE----PDLVLWNTMISGFSQHEDLSEDALICFQDM 344
LID C M + ++F ++ P+L +N +I GF + +++ AL ++
Sbjct: 442 ALID--GLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR-ALELLNEL 498
Query: 345 QRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGN 404
+ G +PD + G + L I + +V +N +CG
Sbjct: 499 KGRGIKPDLLLY---------------GTFIWGLCSLEKIEAAKVVMNEM-----KECG- 537
Query: 405 LHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSA 464
+ N++ +++ Y + G E L L + M + DI +TF ++
Sbjct: 538 -----------IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 586
Query: 465 CAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMP---FDP 521
V + YFN + FG++ A F+ M+D L + ++E A + E M P
Sbjct: 587 LCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP 646
Query: 522 GSIEWAALLGACRKHGNVELAVKAANKFLQL 552
+ +L+ K GNV A+ +K ++
Sbjct: 647 DRTAYTSLMDGNFKQGNVLEALALRDKMAEI 677
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 123/589 (20%), Positives = 243/589 (41%), Gaps = 75/589 (12%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFR-- 75
T++ L+ + R+ K L + I Y+ + + SK G ++ A+ F
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM 373
Query: 76 LTNN--PNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIV----SYNTLIAAHAHRGEH 129
+ + P +Y ++I+ + ++ EL E+ + +IV +Y T++ G+
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433
Query: 130 GPAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVL- 188
A + KE +G CR +V + Y ++ L
Sbjct: 434 DGAYNIVKEMIASG--------------CRPNVVI---------------YTTLIKTFLQ 464
Query: 189 -ARYGGRGLLSEAWRVFHEMGEG--CRDEISWNAMIVACGQCREGKEALVLFGEMVRMGM 245
+R+G +A RV EM E D +N++I+ + + EA EMV G+
Sbjct: 465 NSRFG------DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 246 KIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDC 305
K + FT + ++ + + A ++ M + G N + +GLI+ Y C +++
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY--CKKGKVIEA 576
Query: 306 MKVFEEISEP----DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTS 361
+ + + D + +++G ++ D +DA F++M+ G PD S+ + +
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKN-DKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Query: 362 ACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH--- 418
S L + + ++ + N V + N L+ + + G + A+ + D M
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPN-VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 419 -NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKY 477
N V+ ++I GY + G E+ +LF+ M + +VP++ + +++ C VE
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 478 FNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETM---PFD----PGSIEWAALL 530
F K+ G F+ +++ + + GK E ++ + FD P + + ++
Sbjct: 755 FGTNKK--GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812
Query: 531 GACRKHGNVELAVKAANKFLQLEPHNAVP----YVMLSNMYASAGRWEE 575
K GN+E A F Q++ N +P Y L N Y GR E
Sbjct: 813 DYLCKEGNLE---AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAE 858
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 115/477 (24%), Positives = 203/477 (42%), Gaps = 70/477 (14%)
Query: 112 DIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACREDVG-------- 163
D+ SY +LI+A A+ G + AV +FK+ E G C VI +G
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDG-CKPTLITYNVILNVFGKMGTPWNKITS 265
Query: 164 LVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLL-SEAWRVFHEMGEG--CRDEISWNAM 220
LV ++ + Y ++ RG L EA +VF EM D++++NA+
Sbjct: 266 LVEKMKSDGIAPDAYTYNTLITCC-----KRGSLHQEAAQVFEEMKAAGFSYDKVTYNAL 320
Query: 221 IVACGQCREGKEALVLFGEMV-----------------------------------RMGM 245
+ G+ KEA+ + EMV G
Sbjct: 321 LDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT 380
Query: 246 KIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGML-D 304
K D+FT ++L+ F + M M +G N + I MY RG +
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGN---RGKFTE 437
Query: 305 CMKVFEEIS----EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVT 360
MK+F+EI+ PD+V WNT+++ F Q+ SE + + F++M+RAGF P+ +F+ +
Sbjct: 438 MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGV-FKEMKRAGFVPERETFNTLI 496
Query: 361 SACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPE--- 417
SA S S V+ + + + + +S N ++A ++ G + +V M +
Sbjct: 497 SAYSRCGSFEQAMTVYRRMLDAGVTPD-LSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 418 -HNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQK 476
N ++ S++ YA G L E + I P + +++ C+ + E ++
Sbjct: 556 KPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAER 615
Query: 477 YFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMP---FDPGSIEWAALL 530
F+ +KE+ G P+ + MV + GR + +A +++ M F P + +L+
Sbjct: 616 AFSELKER-GFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 119/549 (21%), Positives = 226/549 (41%), Gaps = 111/549 (20%)
Query: 60 LYSKCGTLDNARTSF--RLTNN---PNVFSYNAIIDACVKHSHLHLARELFDEI------ 108
++ K GT N TS ++ ++ P+ ++YN +I C + S A ++F+E+
Sbjct: 252 VFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFS 311
Query: 109 ------------------PR---------------PDIVSYNTLIAAHAHRGEHGPAVRL 135
P+ P IV+YN+LI+A+A G A+ L
Sbjct: 312 YDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMEL 371
Query: 136 FKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVC--NAVLARYGG 193
+ E G D FT + ++ + + F + C ++C NA + YG
Sbjct: 372 KNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGN 431
Query: 194 RGLLSEAWRVFHEMG--EGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFT 251
RG +E ++F E+ D ++WN ++ GQ E +F EM R G + T
Sbjct: 432 RGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET 491
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEE 311
++++A++ M + RM+ +G
Sbjct: 492 FNTLISAYSRCGSFEQAMTVYRRMLDAGVT------------------------------ 521
Query: 312 ISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSL 371
PDL +NT+++ ++ + E + +M+ +P++ ++ CS L + +
Sbjct: 522 ---PDLSTYNTVLAALARG-GMWEQSEKVLAEMEDGRCKPNELTY------CSLLHAYAN 571
Query: 372 GKQV---HALA--IKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH----NTVS 422
GK++ H+LA + S + R + LV + SKC L +A R F + E + +
Sbjct: 572 GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITT 631
Query: 423 LNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVL---SACAHTGKVEEGQKYFN 479
LNSM++ Y + + ++ + + M + P+ T+ S++ S A GK EE
Sbjct: 632 LNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE------ 685
Query: 480 MMKEKF--GIEPEAKHFSCMVDLLGRAGKLEEAERIIETMP---FDPGSIEWAALLGACR 534
+++E GI+P+ ++ ++ R ++ +A RI M P I + +G+
Sbjct: 686 ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA 745
Query: 535 KHGNVELAV 543
E A+
Sbjct: 746 ADSMFEEAI 754
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 207/464 (44%), Gaps = 30/464 (6%)
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIP----RPDIVSYNTLIAAHAHRGEHGPAVR 134
+P++ +YN++I A + L A EL +++ +PD+ +Y TL++ G+ A+
Sbjct: 346 SPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405
Query: 135 LFKEAREAGLCLDGFTLSGVIK--ACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYG 192
+F+E R AG + T + IK R +M++ +CG S N +LA +G
Sbjct: 406 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 193 GRGLLSEAWRVFHEMGEG--CRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMF 250
G+ SE VF EM + ++N +I A +C ++A+ ++ M+ G+ D+
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 525
Query: 251 TMASVLTAFTCLEDLAGGM-----QFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDC 305
T +VL A GGM + M N L+ Y+ G++
Sbjct: 526 TYNTVLAALA-----RGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHS 580
Query: 306 M--KVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSAC 363
+ +V+ + EP VL T++ S+ DL +A F +++ GF PD + + + S
Sbjct: 581 LAEEVYSGVIEPRAVLLKTLVLVCSKC-DLLPEAERAFSELKERGFSPDITTLNSMVSIY 639
Query: 364 SNLSSPSLGKQV-HALAIKSDIPSNRVSVNNALVAMYSKCGNLHDA----RRVFDTMPEH 418
+ V + + PS ++ N+L+ M+S+ + + R + +
Sbjct: 640 GRRQMVAKANGVLDYMKERGFTPS--MATYNSLMYMHSRSADFGKSEEILREILAKGIKP 697
Query: 419 NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYF 478
+ +S N++I Y ++ ++ ++F M IVP+ IT+ + + + A EE
Sbjct: 698 DIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVV 757
Query: 479 NMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETM-PFDP 521
M K G P ++ +VD + + +EA+ +E + DP
Sbjct: 758 RYMI-KHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDP 800
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 170/420 (40%), Gaps = 86/420 (20%)
Query: 182 SVCNAVLARYGGRGLLSEAWRVFHEMGEG--CRDEISWNAMIVACGQCREGKEALVLFGE 239
SV +++ G G +S A +F+ + E D S+ ++I A +EA+ +F +
Sbjct: 174 SVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKK 233
Query: 240 MVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAP 299
M G K + T +L F G+M G WN + + K
Sbjct: 234 MEEDGCKPTLITYNVILNVF-------------GKM---GTPWNK-----ITSLVEKMKS 272
Query: 300 RGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCV 359
G+ PD +NT+I+ + L ++A F++M+ AGF D ++
Sbjct: 273 DGI-----------APDAYTYNTLITC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTY--- 317
Query: 360 TSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP--- 416
NAL+ +Y K +A +V + M
Sbjct: 318 ---------------------------------NALLDVYGKSHRPKEAMKVLNEMVLNG 344
Query: 417 -EHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQ 475
+ V+ NS+I+ YA+ G+ E+++L M ++ P+ T+ ++LS GKVE
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 476 KYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMP---FDPGSIEWAALLGA 532
F M+ G +P F+ + + G GK E +I + + P + W LL
Sbjct: 405 SIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAV 463
Query: 533 CRKHGNVELAVKAANKFLQLEPHNAVP----YVMLSNMYASAGRWEESATVKRLMRERGV 588
++G + + + F +++ VP + L + Y+ G +E++ TV R M + GV
Sbjct: 464 FGQNG---MDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV 520
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 124/556 (22%), Positives = 248/556 (44%), Gaps = 66/556 (11%)
Query: 98 LHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKA 157
++L ++ P P IV ++ L++A A + + L ++ + G+ + +T S +I
Sbjct: 66 VNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI-- 123
Query: 158 CREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISW 217
+CF C S + LA +L++ ++ +E D ++
Sbjct: 124 -----------NCF-------CRRSQLSLALA------VLAKMMKLGYE-----PDIVTL 154
Query: 218 NAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIK 277
N+++ +A+ L G+MV MG + D FT +++ + + RM+
Sbjct: 155 NSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV 214
Query: 278 SGFNWNPHVGSGLIDMYSKCAPRGMLDC----MKVFEEIS-EPDLVLWNTMISGFSQHED 332
G P + + I + C RG +D +K E+ EP +V++NT+I +++
Sbjct: 215 KG--CQPDLVTYGIVVNGLCK-RGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKN 271
Query: 333 LSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVN 392
++ DAL F +M G RP+ +++ + N S ++ + I+ I N V+ +
Sbjct: 272 VN-DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 330
Query: 393 NALVAMYSKCGNLHDARRVFDTMPEH----NTVSLNSMITGYAQHGVEGESLQLFELMMQ 448
AL+ + K G L +A +++D M + + + +S+I G+ H E+ +FELM+
Sbjct: 331 -ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 389
Query: 449 EDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLE 508
+D PN +T+ +++ +V+EG + F M ++ G+ ++ ++ +A + +
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR-GLVGNTVTYTTLIHGFFQARECD 448
Query: 509 EAERIIETMPFD---PGSIEWAALLGACRKHGNVELAVKAANKFLQ---LEPHNAVPYVM 562
A+ + + M D P + ++ LL +G VE A+ ++LQ +EP +M
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL-VVFEYLQRSKMEPDIYTYNIM 507
Query: 563 LSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEY 622
+ M AG+ E+ + + +GVK V S K + E
Sbjct: 508 IEGM-CKAGKVEDGWDLFCSLSLKGVKPNV------------VTYTTMMSGFCRKGLKEE 554
Query: 623 MGEMLRKMKQAGYVPD 638
+ R+MK+ G +PD
Sbjct: 555 ADALFREMKEEGPLPD 570
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 105/497 (21%), Positives = 202/497 (40%), Gaps = 74/497 (14%)
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAVRLF 136
N+++Y+ +I+ + S L LA + ++ + PDIV+ N+L+ H AV L
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 137 KEAREAGLCLDGFTLSGVIKA------CREDVGLVMQLHCFAVLCGYSCYASVCNAVLAR 190
+ E G D FT + +I E V LV ++ Y V N + R
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 191 YGGRGLLSEAWRVFHEMGEGCRDE--ISWNAMIVACGQCREGKEALVLFGEMVRMGMKID 248
G + A + +M +G + + +N +I A + +AL LF EM G++ +
Sbjct: 235 ----GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Query: 249 MFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKV 308
+ T S++ + + MI+ N N S LID + K +++ K+
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK--LVEAEKL 348
Query: 309 FEEIS----EPDLVLWNTMISGFSQHEDLSE----------------------------- 335
++E+ +PD+ ++++I+GF H+ L E
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 336 -----DALICFQDMQRAGFRPDDCSFSCVTSA------CSNLSSPSLGKQVHALAIKSDI 384
+ + F++M + G + +++ + C N + + KQ+ + + DI
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN--AQIVFKQMVSDGVLPDI 466
Query: 385 PSNRVSVNNALVAMYSKCGNLHDARRVFDTMP----EHNTVSLNSMITGYAQHGVEGESL 440
+ + L+ G + A VF+ + E + + N MI G + G +
Sbjct: 467 MTYSI-----LLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGW 521
Query: 441 QLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDL 500
LF + + + PN +T+ +++S G EE F MKE+ G P++ ++ ++
Sbjct: 522 DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE-GPLPDSGTYNTLIRA 580
Query: 501 LGRAGKLEEAERIIETM 517
R G + +I M
Sbjct: 581 HLRDGDKAASAELIREM 597
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 128/294 (43%), Gaps = 46/294 (15%)
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAVR 134
NPNV +++A+IDA VK L A +L+DE+ + PDI +Y++LI
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI-------------- 368
Query: 135 LFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGR 194
+GF + + + L++ CF + Y N ++ +
Sbjct: 369 ------------NGFCMHDRLDEAKHMFELMISKDCFPNVVTY-------NTLIKGFCKA 409
Query: 195 GLLSEAWRVFHEMGEG--CRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTM 252
+ E +F EM + + +++ +I Q RE A ++F +MV G+ D+ T
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEI 312
+ +L + + + +S P + + I + C + D +F +
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRS--KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 527
Query: 313 S----EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSA 362
S +P++V + TM+SGF + + L E+A F++M+ G PD +++ + A
Sbjct: 528 SLKGVKPNVVTYTTMMSGFCR-KGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/458 (21%), Positives = 208/458 (45%), Gaps = 31/458 (6%)
Query: 197 LSEAWRVFHEMGEG--CRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
+A+ +F EM + + + ++ + + + L+ +M +G+ D+++
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKC----APRGMLDCMKVFE 310
++ F L+ + G+M+K GF + L++ + + ++D M F
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 311 EISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPS 370
+ P++V++NT+I+G ++ DL+ +AL F M++ G R D +++ + S SN +
Sbjct: 180 FV--PNVVIYNTVINGLCKNRDLN-NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 371 LGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH----NTVSLNSM 426
++ +K I N V AL+ + K GNL +AR ++ M N + NS+
Sbjct: 237 DAARLLRDMVKRKIDPN-VIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295
Query: 427 ITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFG 486
I G+ HG G++ +F+LM+ + P+ +T+ ++++ + +VE+G K F M + G
Sbjct: 296 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ-G 354
Query: 487 IEPEAKHFSCMVDLLGRAGKLEEAERIIETMP---FDPGSIEWAALLGACRKHGNVELAV 543
+ +A ++ ++ +AGKL A+++ M P + + LL +G +E A+
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 414
Query: 544 KAANKFLQLEPH-NAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNK 602
+ E + + Y ++ + +E+ + R + +GVK I
Sbjct: 415 VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474
Query: 603 VHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDIR 640
K + ++ R+MK+ G++P R
Sbjct: 475 CR------------KGLQREADKLCRRMKEDGFMPSER 500
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 149/326 (45%), Gaps = 22/326 (6%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELF----DEIPRPDIVSYNTLIAAHAHRGEHGPAVRL 135
PNV YN +I+ K+ L+ A E+F + R D V+YNTLI+ ++ G A RL
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 136 FKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVC--NAVLARYGG 193
++ + + + + +I ++ L+ + + + S +V N+++ +
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 194 RGLLSEAWRVFHEM-GEGC-RDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFT 251
G L +A +F M +GC D +++N +I + + ++ + LF EM G+ D FT
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEE 311
+++ + L + RM+ G +P + + I + C + + + E+
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGV--SPDIVTYNILLDCLCNNGKIEKALVMVED 419
Query: 312 ISEP----DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLS 367
+ + D++ +N +I G + + L E A F+ + R G +PD ++ + S L
Sbjct: 420 LQKSEMDVDIITYNIIIQGLCRTDKLKE-AWCLFRSLTRKGVKPDAIAY---ITMISGLC 475
Query: 368 SPSLGKQVHALA--IKSD--IPSNRV 389
L ++ L +K D +PS R+
Sbjct: 476 RKGLQREADKLCRRMKEDGFMPSERI 501
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 12/211 (5%)
Query: 61 YSKCGTLDNARTSF----RLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPR----PD 112
+ K G L AR + R + PNVF+YN++I+ H L A+ +FD + PD
Sbjct: 264 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 323
Query: 113 IVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKA-CRE-DVGLVMQLHC 170
+V+YNTLI ++LF E GL D FT + +I C+ + + ++
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383
Query: 171 FAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEM--GEGCRDEISWNAMIVACGQCR 228
V CG S N +L G + +A + ++ E D I++N +I +
Sbjct: 384 RMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTD 443
Query: 229 EGKEALVLFGEMVRMGMKIDMFTMASVLTAF 259
+ KEA LF + R G+K D ++++
Sbjct: 444 KLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 116/286 (40%), Gaps = 48/286 (16%)
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAVR 134
+PNV + A+ID VK +L AR L+ E+ R P++ +YN+LI G G A
Sbjct: 251 DPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKY 310
Query: 135 LFKEAREAGLCLDGFT----LSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLAR 190
+F G D T ++G K+ R + G M+L C G A N ++
Sbjct: 311 MFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG--MKLFCEMTYQGLVGDAFTYNTLIHG 368
Query: 191 YGGRGLLSEAWRVFHEMGE-GCRDEISWNAMIVACGQCREGK--EALVLFGEMVRMGMKI 247
Y G L+ A +VF+ M + G +I +++ C C GK +ALV+ ++ + M +
Sbjct: 369 YCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDC-LCNNGKIEKALVMVEDLQKSEMDV 427
Query: 248 DMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMK 307
D+ T ++ + L + + G
Sbjct: 428 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV--------------------------- 460
Query: 308 VFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDD 353
+PD + + TMISG + E +C + M+ GF P +
Sbjct: 461 ------KPDAIAYITMISGLCRKGLQREADKLC-RRMKEDGFMPSE 499
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 207/462 (44%), Gaps = 35/462 (7%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIP----RPDIVSYNTLIAAHAHRGEHGPAVRL 135
P++ +YN +I A + A EL + +P P + +YNT+I G++ A +
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 136 FKEAREAGLCLDGFTL-SGVIKACR-----EDVGLVMQLHCFAVLCGYSCYASVCNAVLA 189
F E +GL D T S +++AC+ E + + V+ C++S +++
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSS----MMS 383
Query: 190 RYGGRGLLSEAWRVFHEMGEG--CRDEISWNAMIVACGQCREG--KEALVLFGEMVRMGM 245
+ G L +A F+ + E D + + +I G CR+G A+ L EM++ G
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQ--GYCRKGMISVAMNLRNEMLQQGC 441
Query: 246 KIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDC 305
+D+ T ++L + L + M + + + + LID C + +
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID--GHCKLGNLQNA 499
Query: 306 MKVFEEISEP----DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTS 361
M++F+++ E D+V +NT++ GF + D+ + A + DM P S+S + +
Sbjct: 500 MELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI-DTAKEIWADMVSKEILPTPISYSILVN 558
Query: 362 ACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH--- 418
A + + +V I +I V + N+++ Y + GN D + M
Sbjct: 559 ALCSKGHLAEAFRVWDEMISKNIKPT-VMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Query: 419 -NTVSLNSMITGYAQHGVEGESLQLFELMMQED--IVPNNITFISVLSACAHTGKVEEGQ 475
+ +S N++I G+ + ++ L + M +E +VP+ T+ S+L +++E +
Sbjct: 618 PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAE 677
Query: 476 KYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETM 517
M E+ G+ P+ ++CM++ L EA RI + M
Sbjct: 678 VVLRKMIER-GVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 129/619 (20%), Positives = 249/619 (40%), Gaps = 143/619 (23%)
Query: 53 LSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPRP- 111
+ N +S CG+ D+ ++ +I V+ L A E F +
Sbjct: 150 IVNSLDSTFSNCGSNDSV--------------FDLLIRTYVQARKLREAHEAFTLLRSKG 195
Query: 112 ---DIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKA-CR----EDVG 163
I + N LI + G A +++E +G+ ++ +TL+ ++ A C+ E VG
Sbjct: 196 FTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVG 255
Query: 164 LVM-QLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEM-GEGCRDEI-SWNAM 220
+ Q+ V Y N +++ Y +GL+ EA+ + + M G+G + ++N +
Sbjct: 256 TFLSQVQEKGVYPDIVTY----NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTV 311
Query: 221 IVACGQCREGK--EALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKS 278
I G C+ GK A +F EM+R G+ D T S+L
Sbjct: 312 I--NGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM--------------------- 348
Query: 279 GFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISE----PDLVLWNTMISGFSQHEDLS 334
C +++ KVF ++ PDLV +++M+S F++ +L
Sbjct: 349 ----------------EACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNL- 391
Query: 335 EDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNA 394
+ AL+ F ++ AG PD+ ++
Sbjct: 392 DKALMYFNSVKEAGLIPDNVIYTI------------------------------------ 415
Query: 395 LVAMYSKCGNLHDARRVFDTMPEH----NTVSLNSMITGYAQHGVEGESLQLFELMMQED 450
L+ Y + G + A + + M + + V+ N+++ G + + GE+ +LF M +
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 451 IVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEA 510
+ P++ T ++ G ++ + F MKEK I + ++ ++D G+ G ++ A
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK-RIRLDVVTYNTLLDGFGKVGDIDTA 534
Query: 511 ERIIETM---PFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNM- 566
+ I M P I ++ L+ A G++ A + ++ + N P VM+ N
Sbjct: 535 KEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMIS---KNIKPTVMICNSM 591
Query: 567 ---YASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDS---SHPMIKEIH 620
Y +G + + M G P C I + ++ FV E++ + ++K++
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGF--VPDC--ISYNTLIYGFVREENMSKAFGLVKKME 647
Query: 621 EYMGEMLRKMKQAGYVPDI 639
E +Q G VPD+
Sbjct: 648 E---------EQGGLVPDV 657
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 157/365 (43%), Gaps = 25/365 (6%)
Query: 18 TFTNLLKQCISQRDI-STGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRL 76
T+ +LL + + D+ T K + + +P S+ +L +++ G LD A F
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSL-FTRSGNLDKALMYFNS 400
Query: 77 TNN----PNVFSYNAIIDACVKHSHLHLARELFDEIPRP----DIVSYNTLIAAHAHRGE 128
P+ Y +I + + +A L +E+ + D+V+YNT++ R
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 460
Query: 129 HGPAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVC--NA 186
G A +LF E E L D +TL+ +I + L + F + V N
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520
Query: 187 VLARYGGRGLLSEAWRVFHEM--GEGCRDEISWNAMIVACGQCREG--KEALVLFGEMVR 242
+L +G G + A ++ +M E IS++ ++ A C +G EA ++ EM+
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL--CSKGHLAEAFRVWDEMIS 578
Query: 243 MGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGF-----NWNPHVGSGLIDMYSKC 297
+K + S++ + + + G F +MI GF ++N + G + +
Sbjct: 579 KNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI-YGFVREENMS 637
Query: 298 APRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFS 357
G++ M+ + PD+ +N+++ GF + + E A + + M G PD +++
Sbjct: 638 KAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKE-AEVVLRKMIERGVNPDRSTYT 696
Query: 358 CVTSA 362
C+ +
Sbjct: 697 CMING 701
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 123/544 (22%), Positives = 232/544 (42%), Gaps = 64/544 (11%)
Query: 109 PRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKAC--REDVGLVM 166
P P I +N L++A A + + L ++ + G+ + +T + +I R + L +
Sbjct: 81 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 140
Query: 167 QLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGE-GCR-DEISWNAMIVAC 224
L + GY +++L Y +S+A + +M E G R D I++ +I
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 225 GQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNP 284
+ EA+ L MV+ G + ++ T V+ D+ +M + N
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANV 260
Query: 285 HVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDM 344
+ S +ID S C R HED DAL F +M
Sbjct: 261 VIYSTVID--SLCKYR-----------------------------HED---DALNLFTEM 286
Query: 345 QRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGN 404
+ G RP+ ++S + S N S ++ + I+ I N V+ N AL+ + K G
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFN-ALIDAFVKEGK 345
Query: 405 LHDARRVFDTMPEH----NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFIS 460
L +A +++D M + + + +S+I G+ H E+ +FELM+ +D PN +T+ +
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 461 VLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFD 520
+++ +++EG + F M ++ G+ ++ ++ +A + A+ + + M D
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQR-GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 464
Query: 521 ---PGSIEWAALLGACRKHGNVELAVKAANKFLQ---LEPHNAVPYVMLSNMYASAGRWE 574
P + + LL K+G +E A+ ++LQ +EP +M+ M AG+ E
Sbjct: 465 GVHPNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQRSKMEPTIYTYNIMIEGM-CKAGKVE 522
Query: 575 ESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAG 634
+ + + +GVK I + + F K + E + RKM++ G
Sbjct: 523 DGWDLFCSLSLKGVKP----DVIIYNTMISGFCR--------KGLKEEADALFRKMREDG 570
Query: 635 YVPD 638
+PD
Sbjct: 571 PLPD 574
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 165/367 (44%), Gaps = 13/367 (3%)
Query: 232 EALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLI 291
+A+ LFG MV+ +F +L+A ++ + +M + G + N + + LI
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127
Query: 292 DMYSKCAPRGMLDCM--KVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGF 349
+ + + + + + K+ + EP +V +++++G+ + +S DA+ M G+
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS-DAVALVDQMVEMGY 186
Query: 350 RPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDAR 409
RPD +F+ + + S + ++ N V+ +V K G++ A
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY-GVVVNGLCKRGDIDLAF 245
Query: 410 RVFDTMP----EHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSAC 465
+ + M E N V +++I ++ E ++L LF M + + PN IT+ S++S
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 466 AHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETM---PFDPG 522
+ + + + + M E+ I P F+ ++D + GKL EAE++ + M DP
Sbjct: 306 CNYERWSDASRLLSDMIER-KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 523 SIEWAALLGACRKHGNVELAVKAANKFLQLEPH-NAVPYVMLSNMYASAGRWEESATVKR 581
+++L+ H ++ A + + N V Y L N + A R +E + R
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 582 LMRERGV 588
M +RG+
Sbjct: 425 EMSQRGL 431
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 175/399 (43%), Gaps = 65/399 (16%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIP----RPDIVSYNTLIAAHAHRGEHGPAVRL 135
PN+ +Y +++ K + LA L +++ ++V Y+T+I + A+ L
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282
Query: 136 FKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
F E G+ + T S +I + LC Y +
Sbjct: 283 FTEMENKGVRPNVITYSSLI----------------SCLCNYERW--------------- 311
Query: 196 LLSEAWRVFHEMGEGCRDE--ISWNAMIVACGQCREGK--EALVLFGEMVRMGMKIDMFT 251
S+A R+ +M E + +++NA+I A +EGK EA L+ EM++ + D+FT
Sbjct: 312 --SDASRLLSDMIERKINPNVVTFNALIDAF--VKEGKLVEAEKLYDEMIKRSIDPDIFT 367
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEE 311
+S++ F + L MI N + LI+ + C + + + +++F E
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF--CKAKRIDEGVELFRE 425
Query: 312 ISEPDLV----LWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSA-CSNL 366
+S+ LV + T+I GF Q D ++A + F+ M G P+ +++ + C N
Sbjct: 426 MSQRGLVGNTVTYTTLIHGFFQARD-CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN- 483
Query: 367 SSPSLGKQVHALAIKSDIPSNR----VSVNNALVAMYSKCGNLHDARRVFDTMP----EH 418
GK A+ + + ++ + N ++ K G + D +F ++ +
Sbjct: 484 -----GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 538
Query: 419 NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNIT 457
+ + N+MI+G+ + G++ E+ LF M ++ +P++ T
Sbjct: 539 DVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 124/284 (43%), Gaps = 46/284 (16%)
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAVR 134
NPNV ++NA+IDA VK L A +L+DE+ + PDI +Y++LI
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI-------------- 372
Query: 135 LFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGR 194
+GF + + + L++ CF + Y N ++ +
Sbjct: 373 ------------NGFCMHDRLDEAKHMFELMISKDCFPNVVTY-------NTLINGFCKA 413
Query: 195 GLLSEAWRVFHEMGEG--CRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTM 252
+ E +F EM + + +++ +I Q R+ A ++F +MV G+ ++ T
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEI 312
++L L M + +S P + + I + C + D +F +
Sbjct: 474 NTLLDGLCKNGKLEKAMVVFEYLQRS--KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531
Query: 313 S----EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPD 352
S +PD++++NTMISGF + + L E+A F+ M+ G PD
Sbjct: 532 SLKGVKPDVIIYNTMISGFCR-KGLKEEADALFRKMREDGPLPD 574
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 108/492 (21%), Positives = 208/492 (42%), Gaps = 32/492 (6%)
Query: 80 PNVFSYNAIIDA---CVKHSHLHLARE-LFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRL 135
PNV ++N +ID C ++ + +E + + P +++Y+ L+ G A +
Sbjct: 293 PNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFV 352
Query: 136 FKEAREAGLCLDGFTLSGVIKACREDVGL--VMQLHCFAVLCGYSCYASVCNAVLARYGG 193
KE + G + + +I + E L +++ V G S +S N ++ Y
Sbjct: 353 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 412
Query: 194 RGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCRE--GKEALVLFGEMVRMGMKIDMFT 251
G A R+ EM + + V C C AL GEM+ M
Sbjct: 413 NGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 472
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEE 311
+ ++++ + ++ + + GF + + L ++ C + + ++ +E
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL--LHGLCEAGKLDEAFRIQKE 530
Query: 312 I----SEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLS 367
I D V +NT+ISG + L E A + +M + G +PD+ ++S + N++
Sbjct: 531 ILGRGCVMDRVSYNTLISGCCGKKKLDE-AFMFLDEMVKRGLKPDNYTYSILICGLFNMN 589
Query: 368 SPSLGKQVHALAIKSDIPSN----RVSVNNALVAMYSKCGNLHDARRVFDTM----PEHN 419
K A+ D N V + ++ K + + FD M + N
Sbjct: 590 -----KVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644
Query: 420 TVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFN 479
TV N +I Y + G +L+L E M + I PN+ T+ S++ + +VEE + F
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 704
Query: 480 MMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETM---PFDPGSIEWAALLGACRKH 536
M+ + G+EP H++ ++D G+ G++ + E ++ M P I + ++G +
Sbjct: 705 EMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD 763
Query: 537 GNVELAVKAANK 548
GNV A + N+
Sbjct: 764 GNVTEASRLLNE 775
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 189/466 (40%), Gaps = 97/466 (20%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIV----SYNTLIAAHAHRGEHGPAVRL 135
PNV YN +ID+ ++ L+ A E+ D + + +YNTLI + G+ A RL
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 136 FKEAREAGLCLDGFTLSGVI---------------------KACREDVGLVMQLHCFAVL 174
KE G ++ + + VI + GL+ L + L
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTL--ISGL 480
Query: 175 C------------------GYSCYASVCNAVLARYGGRGLLSEAWRVFHE-MGEGC-RDE 214
C G+ NA+L G L EA+R+ E +G GC D
Sbjct: 481 CKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 540
Query: 215 ISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGR 274
+S+N +I C ++ EA + EMV+ G+K D +T + ++ + + +QF
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF--- 597
Query: 275 MIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLS 334
W+ C GML PD+ ++ MI G + E +
Sbjct: 598 -------WD------------DCKRNGML-----------PDVYTYSVMIDGCCKAER-T 626
Query: 335 EDALICFQDMQRAGFRPDDCSFS-CVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNN 393
E+ F +M +P+ ++ + + C + G+ AL ++ D+ +S N+
Sbjct: 627 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS------GRLSMALELREDMKHKGISPNS 680
Query: 394 A----LVAMYSKCGNLHDARRVFDTMP----EHNTVSLNSMITGYAQHGVEGESLQLFEL 445
A L+ S + +A+ +F+ M E N ++I GY + G + L
Sbjct: 681 ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 740
Query: 446 MMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEA 491
M +++ PN IT+ ++ A G V E + N M+EK GI P++
Sbjct: 741 MHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK-GIVPDS 785
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 11/145 (7%)
Query: 451 IVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEA 510
+ P+ F + ++A GKVEE K F+ M+E G+ P F+ ++D LG G+ +EA
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA-GVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 511 ----ERIIETMPFDPGSIEWAAL---LGACRKHGNVELAVKAANKFLQLEPHNAVPYVML 563
E+++E +P I ++ L L ++ G+ +K K + P N + Y L
Sbjct: 315 FMFKEKMVER-GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK--KGFPPNVIVYNNL 371
Query: 564 SNMYASAGRWEESATVKRLMRERGV 588
+ + AG ++ +K LM +G+
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGL 396
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 108/492 (21%), Positives = 208/492 (42%), Gaps = 32/492 (6%)
Query: 80 PNVFSYNAIIDA---CVKHSHLHLARE-LFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRL 135
PNV ++N +ID C ++ + +E + + P +++Y+ L+ G A +
Sbjct: 293 PNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFV 352
Query: 136 FKEAREAGLCLDGFTLSGVIKACREDVGL--VMQLHCFAVLCGYSCYASVCNAVLARYGG 193
KE + G + + +I + E L +++ V G S +S N ++ Y
Sbjct: 353 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 412
Query: 194 RGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCRE--GKEALVLFGEMVRMGMKIDMFT 251
G A R+ EM + + V C C AL GEM+ M
Sbjct: 413 NGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 472
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEE 311
+ ++++ + ++ + + GF + + L ++ C + + ++ +E
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL--LHGLCEAGKLDEAFRIQKE 530
Query: 312 I----SEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLS 367
I D V +NT+ISG + L E A + +M + G +PD+ ++S + N++
Sbjct: 531 ILGRGCVMDRVSYNTLISGCCGKKKLDE-AFMFLDEMVKRGLKPDNYTYSILICGLFNMN 589
Query: 368 SPSLGKQVHALAIKSDIPSN----RVSVNNALVAMYSKCGNLHDARRVFDTM----PEHN 419
K A+ D N V + ++ K + + FD M + N
Sbjct: 590 -----KVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644
Query: 420 TVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFN 479
TV N +I Y + G +L+L E M + I PN+ T+ S++ + +VEE + F
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 704
Query: 480 MMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETM---PFDPGSIEWAALLGACRKH 536
M+ + G+EP H++ ++D G+ G++ + E ++ M P I + ++G +
Sbjct: 705 EMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD 763
Query: 537 GNVELAVKAANK 548
GNV A + N+
Sbjct: 764 GNVTEASRLLNE 775
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 189/466 (40%), Gaps = 97/466 (20%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIV----SYNTLIAAHAHRGEHGPAVRL 135
PNV YN +ID+ ++ L+ A E+ D + + +YNTLI + G+ A RL
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 136 FKEAREAGLCLDGFTLSGVI---------------------KACREDVGLVMQLHCFAVL 174
KE G ++ + + VI + GL+ L + L
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTL--ISGL 480
Query: 175 C------------------GYSCYASVCNAVLARYGGRGLLSEAWRVFHE-MGEGC-RDE 214
C G+ NA+L G L EA+R+ E +G GC D
Sbjct: 481 CKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 540
Query: 215 ISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGR 274
+S+N +I C ++ EA + EMV+ G+K D +T + ++ + + +QF
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF--- 597
Query: 275 MIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLS 334
W+ C GML PD+ ++ MI G + E +
Sbjct: 598 -------WD------------DCKRNGML-----------PDVYTYSVMIDGCCKAER-T 626
Query: 335 EDALICFQDMQRAGFRPDDCSFS-CVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNN 393
E+ F +M +P+ ++ + + C + G+ AL ++ D+ +S N+
Sbjct: 627 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS------GRLSMALELREDMKHKGISPNS 680
Query: 394 A----LVAMYSKCGNLHDARRVFDTMP----EHNTVSLNSMITGYAQHGVEGESLQLFEL 445
A L+ S + +A+ +F+ M E N ++I GY + G + L
Sbjct: 681 ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 740
Query: 446 MMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEA 491
M +++ PN IT+ ++ A G V E + N M+EK GI P++
Sbjct: 741 MHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK-GIVPDS 785
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 11/145 (7%)
Query: 451 IVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEA 510
+ P+ F + ++A GKVEE K F+ M+E G+ P F+ ++D LG G+ +EA
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA-GVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 511 ----ERIIETMPFDPGSIEWAAL---LGACRKHGNVELAVKAANKFLQLEPHNAVPYVML 563
E+++E +P I ++ L L ++ G+ +K K + P N + Y L
Sbjct: 315 FMFKEKMVER-GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK--KGFPPNVIVYNNL 371
Query: 564 SNMYASAGRWEESATVKRLMRERGV 588
+ + AG ++ +K LM +G+
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGL 396
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 196/431 (45%), Gaps = 32/431 (7%)
Query: 213 DEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFH 272
D I++N MI G C+ G E + RM + D+ T ++L + L M+
Sbjct: 171 DVITYNVMI--SGYCKAG-EINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 273 GRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISE----PDLVLWNTMISGFS 328
RM++ + P V + I + + C G+ MK+ +E+ + PD+V +N +++G
Sbjct: 228 DRMLQR--DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 329 QHEDLSEDALICFQDMQRAGFRPDDCSFSCV-TSACSNLSSPSLGKQVHALAIKSDIPSN 387
+ L E A+ DM +G +P+ + + + S CS K + + K PS
Sbjct: 286 KEGRLDE-AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS- 343
Query: 388 RVSVNNALVAMYSKCGNLHDARRVFDTMPEH----NTVSLNSMITGYAQHGVEGESLQLF 443
V N L+ + G L A + + MP+H N++S N ++ G+ + +++
Sbjct: 344 -VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 444 ELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGR 503
E M+ P+ +T+ ++L+A GKVE+ + N + K G P ++ ++D L +
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK-GCSPVLITYNTVIDGLAK 461
Query: 504 AGKLEEAERIIETM---PFDPGSIEWAALLGACRKHGNVELAVKAANKF--LQLEPHNAV 558
AGK +A ++++ M P +I +++L+G + G V+ A+K ++F + + P NAV
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP-NAV 520
Query: 559 PYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKE 618
+ + + + + + M RG K I I+ + M KE
Sbjct: 521 TFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAY--------EGMAKE 572
Query: 619 IHEYMGEMLRK 629
E + E+ K
Sbjct: 573 ALELLNELCNK 583
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 101/486 (20%), Positives = 196/486 (40%), Gaps = 91/486 (18%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIP-RPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
P+V +YN +I K ++ A + D + PD+V+YNT++ + G+ A+ +
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 139 AREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVC--NAVLARYGGRGL 196
+ D T + +I+A D G+ + + C V N ++ G
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 197 LSEAWRVFHEM-GEGCRDEISWNAMIVACGQCREGK--EALVLFGEMVRMGMKIDMFTMA 253
L EA + ++M GC+ + + +I+ C G+ +A L +M+R G + T
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILR-SMCSTGRWMDAEKLLADMLRKGFSPSVVTF- 347
Query: 254 SVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEIS 313
++L F C + L GR I D+ K G
Sbjct: 348 NILINFLCRKGLL------GRAI---------------DILEKMPQHG-----------C 375
Query: 314 EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGK 373
+P+ + +N ++ GF + + + + A+ + M G PD ++
Sbjct: 376 QPNSLSYNPLLHGFCKEKKM-DRAIEYLERMVSRGCYPDIVTY----------------- 417
Query: 374 QVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHN----TVSLNSMITG 429
N ++ K G + DA + + + ++ N++I G
Sbjct: 418 -------------------NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDG 458
Query: 430 YAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEP 489
A+ G G++++L + M +D+ P+ IT+ S++ + GKV+E K+F+ E+ GI P
Sbjct: 459 LAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF-ERMGIRP 517
Query: 490 EAKHFSCMVDLLGRAGKLEEAERIIETMPF------DPGSIEWAALLGACRKHGNVELAV 543
A F+ + +LG K + +R I+ + F P + L+ G + A+
Sbjct: 518 NAVTFNSI--MLGLC-KSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEAL 574
Query: 544 KAANKF 549
+ N+
Sbjct: 575 ELLNEL 580
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/477 (20%), Positives = 190/477 (39%), Gaps = 98/477 (20%)
Query: 61 YSKCGTLDNARTSF-RLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVS 115
Y K G ++NA + R++ +P+V +YN I+ + L A E+ D + + PD+++
Sbjct: 182 YCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVIT 241
Query: 116 YNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKA-CREDVGLVMQLHCFAVL 174
Y LI A G A++L E R+ G D T + ++ C+E
Sbjct: 242 YTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE-------------- 287
Query: 175 CGYSCYASVCNAVLARYGGRGLLSEAWRVFHEM-GEGCRDEISWNAMIVACGQCREGK-- 231
G L EA + ++M GC+ + + +I+ C G+
Sbjct: 288 --------------------GRLDEAIKFLNDMPSSGCQPNVITHNIILR-SMCSTGRWM 326
Query: 232 EALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAG-------GMQFHGRMIKSGFNWNP 284
+A L +M+R G + T ++L F C + L G M HG S ++NP
Sbjct: 327 DAEKLLADMLRKGFSPSVVTF-NILINFLCRKGLLGRAIDILEKMPQHGCQPNS-LSYNP 384
Query: 285 HVGSGLIDMYSKCAPRGMLDCMKVFEEISE----PDLVLWNTMISGFSQHEDLSEDALIC 340
++ C + M ++ E + PD+V +NTM++ + + EDA+
Sbjct: 385 L-------LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV-EDAVEI 436
Query: 341 FQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYS 400
+ G P +++ V + + GK + L
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLA--KAGKTGKAIKLL---------------------- 472
Query: 401 KCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFIS 460
D R D P+ T++ +S++ G ++ G E+++ F + I PN +TF S
Sbjct: 473 ------DEMRAKDLKPD--TITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 461 VLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETM 517
++ + + + + M + G +P ++ +++ L G +EA ++ +
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINR-GCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/449 (22%), Positives = 205/449 (45%), Gaps = 39/449 (8%)
Query: 205 HEMGEGCRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLED 264
HE + ++N ++ + ++ A LF EM + + D +T ++++T+F
Sbjct: 146 HEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGM 205
Query: 265 LAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISE----PDLVLW 320
+ + +M + + + + S LI++ + + +F + PDLV +
Sbjct: 206 FDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYS--KAISIFSRLKRSGITPDLVAY 263
Query: 321 NTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSA-CSNLSSPSLGKQVHALA 379
N+MI+ + + + L +A + ++M AG P+ S+S + S N K + AL+
Sbjct: 264 NSMINVYGKAK-LFREARLLIKEMNEAGVLPNTVSYSTLLSVYVEN------HKFLEALS 316
Query: 380 IKSDIPSNRVSVN----NALVAMYSKCGNLHDARRVFDTMP----EHNTVSLNSMITGYA 431
+ +++ +++ N ++ +Y + + +A R+F ++ E N VS N+++ Y
Sbjct: 317 VFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYG 376
Query: 432 QHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKE--KFGIEP 489
+ + GE++ LF LM ++DI N +T+ +++ GK E +K N+++E GIEP
Sbjct: 377 EAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIY---GKTMEHEKATNLVQEMQSRGIEP 433
Query: 490 EAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKF 549
A +S ++ + G+AGKL+ A + + + I+ + V L A
Sbjct: 434 NAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLL 493
Query: 550 LQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAE 609
+L+ + +P + A AGR EE+ V R E G K I+ +
Sbjct: 494 HELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMIN-----LYSR 548
Query: 610 DSSHPMIKEIHEYMGEMLRKMKQAGYVPD 638
+ + + E+ E KM+ AGY PD
Sbjct: 549 NQRYVNVIEVFE-------KMRTAGYFPD 570
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 113/543 (20%), Positives = 236/543 (43%), Gaps = 46/543 (8%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAVRL 135
P+VF+YN ++ ++ +A LFDE+ + PD +Y+TLI + G A+
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 136 FKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVL--CGYSCYASVCNAVLARYGG 193
++ + + D S +I+ R + F+ L G + N+++ YG
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 194 RGLLSEAWRVFHEMGEG--CRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFT 251
L EA + EM E + +S++ ++ + + EAL +F EM + +D+ T
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 332
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEE 311
++ + L+ + + + K N + ++ +Y + G + + +F
Sbjct: 333 CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFG--EAIHLFRL 390
Query: 312 ISEPDL----VLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLS 367
+ D+ V +NTMI + + + E A Q+MQ G P+ ++S + S
Sbjct: 391 MQRKDIEQNVVTYNTMIKIYGKTME-HEKATNLVQEMQSRGIEPNAITYSTIISIWG--- 446
Query: 368 SPSLGKQVHALAIKSDIPSNRVSVNNAL----VAMYSKCGNLHDARRVFDTMPEHNTVSL 423
GK A + + S+ V ++ L + Y + G + A+R+ + + +
Sbjct: 447 --KAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPR 504
Query: 424 NSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMK- 482
+ IT A+ G E+ +F + V + ISV + Q+Y N+++
Sbjct: 505 ETAITILAKAGRTEEATWVFRQAFESGEVKD----ISVFGCMINL--YSRNQRYVNVIEV 558
Query: 483 -EKF---GIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFD----PGSIEWAAL-LGAC 533
EK G P++ + +++ G+ + E+A+ + M + P + + L L +
Sbjct: 559 FEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSS 618
Query: 534 RKHGNVELAVKAANKFLQLEP--HNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKK 591
+K + V++ + L+ +P ++ +++++ +Y A + +++ V MRERG+ K
Sbjct: 619 KKDFEM---VESLFQRLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILKP 675
Query: 592 -PG 593
PG
Sbjct: 676 FPG 678
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/501 (22%), Positives = 223/501 (44%), Gaps = 52/501 (10%)
Query: 103 ELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKAC--RE 160
E+ P P I+ ++ L++A A + + L ++ + G+ + +T S +I R
Sbjct: 71 EMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRS 130
Query: 161 DVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMG-EGCR-DEISWN 218
+ L + + + GY +++L Y +SEA + +M G + + +++N
Sbjct: 131 QLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFN 190
Query: 219 AMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKS 278
+I + EA+ L MV G + D+ T V+ D +M
Sbjct: 191 TLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM--- 247
Query: 279 GFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDAL 338
+G L EP ++++NT+I G +++ + +DAL
Sbjct: 248 --------------------EQGKL----------EPGVLIYNTIIDGLCKYKHM-DDAL 276
Query: 339 ICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAM 398
F++M+ G RP+ ++S + S N S ++ + I+ I + V +AL+
Sbjct: 277 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD-VFTFSALIDA 335
Query: 399 YSKCGNLHDARRVFDTMPEHNT----VSLNSMITGYAQHGVEGESLQLFELMMQEDIVPN 454
+ K G L +A +++D M + + V+ +S+I G+ H E+ Q+FE M+ + P+
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 455 NITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERII 514
+T+ +++ +VEEG + F M ++ G+ ++ ++ L +AG + A+ I
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQR-GLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 515 ETMPFD---PGSIEWAALLGACRKHGNVELAVKAANKFLQ---LEPHNAVPYVMLSNMYA 568
+ M D P + + LL K+G +E A+ ++LQ +EP +M+ M
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQRSKMEPTIYTYNIMIEGM-C 512
Query: 569 SAGRWEESATVKRLMRERGVK 589
AG+ E+ + + +GVK
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVK 533
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/483 (21%), Positives = 215/483 (44%), Gaps = 32/483 (6%)
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAVRLF 136
N ++Y+ +I+ + S L LA + ++ + P+IV+ ++L+ + H AV L
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 174
Query: 137 KEAREAGLCLDGFTLSGVI------KACREDVGLVMQLHCFAVLCGYSCYASVCNAVLAR 190
+ G + T + +I E + L+ ++ Y V N + R
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 234
Query: 191 YGGRGLLSEAWRVFHEMGEGCRDE--ISWNAMIVACGQCREGKEALVLFGEMVRMGMKID 248
G A+ + ++M +G + + +N +I + + +AL LF EM G++ +
Sbjct: 235 ----GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
Query: 249 MFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKV 308
+ T +S+++ + + MI+ N + S LID + K +++ K+
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK--LVEAEKL 348
Query: 309 FEEIS----EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACS 364
++E+ +P +V ++++I+GF H+ L E A F+ M PD +++ +
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDE-AKQMFEFMVSKHCFPDVVTYNTLIKGFC 407
Query: 365 NLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH----NT 420
G +V + + N V+ N + ++ + G+ A+ +F M N
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF-QAGDCDMAQEIFKEMVSDGVPPNI 466
Query: 421 VSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNM 480
++ N+++ G ++G +++ +FE + + + P T+ ++ GKVE+G F
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 526
Query: 481 MKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFD---PGSIEWAALLGACRKHG 537
+ K G++P+ ++ M+ R G EEA+ + + M D P S + L+ A + G
Sbjct: 527 LSLK-GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585
Query: 538 NVE 540
+ E
Sbjct: 586 DRE 588
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 173/373 (46%), Gaps = 25/373 (6%)
Query: 232 EALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLI 291
+A+ LFGEMV+ + + +L+A + + +M G N + S LI
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 292 DMYSKCA--PRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGF 349
+ + + + P + K+ + EP++V +++++G+ + +SE A+ M G+
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE-AVALVDQMFVTGY 182
Query: 350 RPDDCSFSCVTSA--CSNLSSPSLG--KQVHALAIKSDIPSNRVSVNNALVAMYSKCGNL 405
+P+ +F+ + N +S ++ ++ A + D+ + V VN K G+
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG-----LCKRGDT 237
Query: 406 HDARRVFDTMP----EHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISV 461
A + + M E + N++I G ++ ++L LF+ M + I PN +T+ S+
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 462 LSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETM---P 518
+S + G+ + + + M E+ I P+ FS ++D + GKL EAE++ + M
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIER-KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 519 FDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPH---NAVPYVMLSNMYASAGRWEE 575
DP + +++L+ H ++ A K +F+ + H + V Y L + R EE
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEA-KQMFEFM-VSKHCFPDVVTYNTLIKGFCKYKRVEE 414
Query: 576 SATVKRLMRERGV 588
V R M +RG+
Sbjct: 415 GMEVFREMSQRGL 427
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/453 (18%), Positives = 180/453 (39%), Gaps = 88/453 (19%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIP----RPDIVSYNTLIAAHAHRGEHGPAVRL 135
PN ++N +I H+ A L D + +PD+V+Y ++ RG+ A L
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 136 FKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
+ + L + G+++ LC Y
Sbjct: 244 LNKMEQGKL----------------EPGVLIYNTIIDGLCKYKH---------------- 271
Query: 196 LLSEAWRVFHEM-GEGCRDEISWNAMIVACGQCREGK--EALVLFGEMVRMGMKIDMFTM 252
+ +A +F EM +G R + + +++C C G+ +A L +M+ + D+FT
Sbjct: 272 -MDDALNLFKEMETKGIRPNVVTYSSLISC-LCNYGRWSDASRLLSDMIERKINPDVFTF 329
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEI 312
++++ AF L + + M+K + + S LI+ + C + + ++FE +
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF--CMHDRLDEAKQMFEFM 387
Query: 313 SE----PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSS 368
PD+V +NT+I GF +++ + E+ + F++M + G + +++ +
Sbjct: 388 VSKHCFPDVVTYNTLIKGFCKYKRV-EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 369 PSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH---------- 418
+ +++ + +P N ++ N L + K G L A VF+ +
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGL-CKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Query: 419 -----------------------------NTVSLNSMITGYAQHGVEGESLQLFELMMQE 449
+ V+ N+MI+G+ + G + E+ LF+ M ++
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 450 DIVPNNITFISVLSACAHTGKVEEGQKYFNMMK 482
+PN+ + +++ A G E + M+
Sbjct: 566 GTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 127/294 (43%), Gaps = 46/294 (15%)
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAVR 134
NP+VF+++A+IDA VK L A +L+DE+ + P IV+Y++LI
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI-------------- 368
Query: 135 LFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGR 194
+GF + + ++ ++ HCF + Y N ++ +
Sbjct: 369 ------------NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY-------NTLIKGFCKY 409
Query: 195 GLLSEAWRVFHEMGEG--CRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTM 252
+ E VF EM + + +++N +I Q + A +F EMV G+ ++ T
Sbjct: 410 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 469
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEI 312
++L L M + +S P + + I + C + D +F +
Sbjct: 470 NTLLDGLCKNGKLEKAMVVFEYLQRS--KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527
Query: 313 S----EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSA 362
S +PD+V +NTMISGF + E+A F++M+ G P+ ++ + A
Sbjct: 528 SLKGVKPDVVAYNTMISGFCRKGS-KEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 119/269 (44%), Gaps = 24/269 (8%)
Query: 335 EDALICFQDMQRAGFRPDDCSFSCVTSACSNLSS----PSLGKQVHALAIKSDIPSNRVS 390
+DA+ F +M ++ P FS + SA + ++ SLG+Q+ L I P N +
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGI----PHNHYT 118
Query: 391 VNNALVAMYSKCGNLHDARRVFDTMP----EHNTVSLNSMITGYAQHGVEGESLQLFELM 446
+ L+ + + L A V M E N V+L+S++ GY E++ L + M
Sbjct: 119 YS-ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 447 MQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGK 506
PN +TF +++ K E + M K G +P+ + +V+ L + G
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK-GCQPDLVTYGVVVNGLCKRGD 236
Query: 507 LEEAERIIETM---PFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPH----NAVP 559
+ A ++ M +PG + + ++ K+ +++ A N F ++E N V
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMD---DALNLFKEMETKGIRPNVVT 293
Query: 560 YVMLSNMYASAGRWEESATVKRLMRERGV 588
Y L + + GRW +++ + M ER +
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKI 322
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/493 (23%), Positives = 224/493 (45%), Gaps = 30/493 (6%)
Query: 47 IPHSTYLSNHFTLLYSKCGTLDNART---SFRLTNNPNVFSYNAIIDACVKHSHLHLA-- 101
I +T N +Y G L + + +L P+ +YN +I K++ + A
Sbjct: 329 IVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGA 388
Query: 102 --RELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACR 159
+E+ D+ +PD VSY TL+ A + R A L E + + +D +T S + +
Sbjct: 389 YFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYV 448
Query: 160 EDVGLVMQLHCFAVL-CGYSCYASVCNAVLARYGGRGLLSEAWRVF---HEMGEGCRDEI 215
E L F + + +A + YG RG LSEA RVF E+ + R I
Sbjct: 449 EAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNK--RTVI 506
Query: 216 SWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRM 275
+N MI A G + ++A LF M+ G+ D T +++ + G + +M
Sbjct: 507 EYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKM 566
Query: 276 IKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEIS----EPDLVLWNTMISGFSQHE 331
++G+ + +I + K M + +V++E+ EPD+V++ +I+ F+
Sbjct: 567 RETGYVSDCIPYCAVISSFVKLGQLNMAE--EVYKEMVEYNIEPDVVVYGVLINAFADTG 624
Query: 332 DLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNL----SSPSLGKQVHALAIKSDIPSN 387
++ + A+ + M+ AG + ++ + + + + ++ +++ K+ P
Sbjct: 625 NVQQ-AMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPD- 682
Query: 388 RVSVNNALVAMYSKCGNLHDARRVFDTMP---EHNTVSLNSMITGYAQHGVEGESLQLFE 444
V +N ++ +YS+ + A +FD+M E N + M+ Y ++G E+ Q+ +
Sbjct: 683 -VYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAK 741
Query: 445 LMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRA 504
M + I+ + +++ SVL A G+ +E + F M GI+P+ F + +L +
Sbjct: 742 QMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSS-GIQPDDSTFKSLGTILMKL 800
Query: 505 GKLEEAERIIETM 517
G ++A R IE +
Sbjct: 801 GMSKKAVRKIEEI 813
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 115/534 (21%), Positives = 225/534 (42%), Gaps = 75/534 (14%)
Query: 83 FSYNAIIDACVKHSHLHLARELF----DEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
++YN +ID K + A E F +E P V++NT+I + + G+ G L K
Sbjct: 299 YTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMK- 357
Query: 139 AREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLS 198
M+LHC Y N +++ + +
Sbjct: 358 --------------------------TMKLHCAPDTRTY-------NILISLHTKNNDIE 384
Query: 199 EAWRVFHEM-GEGCR-DEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVL 256
A F EM +G + D +S+ ++ A +EA L EM ++ID +T +++
Sbjct: 385 RAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALT 444
Query: 257 TAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGML-DCMKVF---EEI 312
+ E L + R +G N + S ID Y + RG L + +VF +E+
Sbjct: 445 RMYVEAEMLEKSWSWFKRFHVAG-NMSSEGYSANIDAYGE---RGYLSEAERVFICCQEV 500
Query: 313 SEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLG 372
++ ++ +N MI + + E A F+ M G PD C+++ + ++ P G
Sbjct: 501 NKRTVIEYNVMIKAYGISKS-CEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKG 559
Query: 373 K----QVHALAIKSD-IPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHN----TVSL 423
+ ++ SD IP A+++ + K G L+ A V+ M E+N V
Sbjct: 560 RCYLEKMRETGYVSDCIPY------CAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVY 613
Query: 424 NSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMM-- 481
+I +A G +++ E M + I N++ + S++ G ++E + + +
Sbjct: 614 GVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQ 673
Query: 482 ---KEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPF--DPGSIEWAALLGACRKH 536
K ++ P+ +CM++L + +AE I ++M + +A +L +K+
Sbjct: 674 SCNKTQY---PDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKN 730
Query: 537 GNVELAVKAANKFLQLEP-HNAVPYVMLSNMYASAGRWEESATVKRLMRERGVK 589
G E A + A + +++ + + Y + ++A GR++E+ + M G++
Sbjct: 731 GRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQ 784
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 116/542 (21%), Positives = 235/542 (43%), Gaps = 60/542 (11%)
Query: 109 PRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKAC--REDVGLVM 166
P P I +N L++A A + + L ++ + G+ + +T + +I R + L +
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 167 QLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGE-GCR-DEISWNAMIVAC 224
L + GY +++L Y +S+A + +M E G R D I++ +I
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 225 GQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNP 284
+ EA+ L MV+ G + ++ T V+ D I FN
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD-----------IDLAFNLLN 174
Query: 285 HVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDM 344
+ + I E D+V++NT+I ++ + +DAL F++M
Sbjct: 175 KMEAAKI----------------------EADVVIFNTIIDSLCKYRHV-DDALNLFKEM 211
Query: 345 QRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGN 404
+ G RP+ ++S + S + S Q+ + I+ I N V+ N AL+ + K G
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN-ALIDAFVKEGK 270
Query: 405 LHDARRVFDTMPEH----NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFIS 460
+A ++ D M + + + NS+I G+ H ++ Q+FE M+ +D P+ T+ +
Sbjct: 271 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330
Query: 461 VLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFD 520
++ + +VE+G + F M + G+ + ++ ++ L G + A+++ + M D
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHR-GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 389
Query: 521 ---PGSIEWAALLGACRKHGNVELAVKAANKFLQLEPH-NAVPYVMLSNMYASAGRWEES 576
P + ++ LL +G +E A++ + + E + Y + AG+ ++
Sbjct: 390 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 449
Query: 577 ATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYV 636
+ + +GV KP + ++ S +++E + +L+KMK+ G +
Sbjct: 450 WDLFCSLSLKGV--KPNVV------TYNTMISGLCSKRLLQEAY----ALLKKMKEDGPL 497
Query: 637 PD 638
PD
Sbjct: 498 PD 499
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 171/406 (42%), Gaps = 55/406 (13%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIP----RPDIVSYNTLIAAHAHRGEHGPAVRL 135
PN+ +Y +++ K + LA L +++ D+V +NT+I + A+ L
Sbjct: 148 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 207
Query: 136 FKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
FKE G+ + T S +I + LC Y G
Sbjct: 208 FKEMETKGIRPNVVTYSSLI----------------SCLCSY-----------------G 234
Query: 196 LLSEAWRVFHEMGEGCRDE--ISWNAMIVACGQCREGK--EALVLFGEMVRMGMKIDMFT 251
S+A ++ +M E + +++NA+I A +EGK EA L +M++ + D+FT
Sbjct: 235 RWSDASQLLSDMIEKKINPNLVTFNALIDAF--VKEGKFVEAEKLHDDMIKRSIDPDIFT 292
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEE 311
S++ F + L Q M+ + + LI + C + + D ++F E
Sbjct: 293 YNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF--CKSKRVEDGTELFRE 350
Query: 312 ISEP----DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLS 367
+S D V + T+I G H+ ++A F+ M G PD ++S + N
Sbjct: 351 MSHRGLVGDTVTYTTLIQGLF-HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Query: 368 SPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP----EHNTVSL 423
+V KS+I + + + ++ K G + D +F ++ + N V+
Sbjct: 410 KLEKALEVFDYMQKSEIKLD-IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468
Query: 424 NSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTG 469
N+MI+G + E+ L + M ++ +P++ T+ +++ A G
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 120/294 (40%), Gaps = 46/294 (15%)
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAVR 134
NPN+ ++NA+IDA VK A +L D++ + PDI +YN+LI
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI-------------- 297
Query: 135 LFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGR 194
+GF + + ++ ++ CF L Y N ++ +
Sbjct: 298 ------------NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY-------NTLIKGFCKS 338
Query: 195 GLLSEAWRVFHEMGEG--CRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTM 252
+ + +F EM D +++ +I + A +F +MV G+ D+ T
Sbjct: 339 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 398
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEI 312
+ +L L ++ M KS + ++ + +I+ C + D +F +
Sbjct: 399 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE--GMCKAGKVDDGWDLFCSL 456
Query: 313 S----EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSA 362
S +P++V +NTMISG L E A + M+ G PD +++ + A
Sbjct: 457 SLKGVKPNVVTYNTMISGLCSKRLLQE-AYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 147/338 (43%), Gaps = 20/338 (5%)
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIP----RPDIVSYNTLIAAHAHRGEHGPAVRLF 136
+V +N IID+ K+ H+ A LF E+ RP++V+Y++LI+ G A +L
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 137 KEAREAGLCLDGFTLSGVIKACREDVGLV--MQLHCFAVLCGYSCYASVCNAVLARYGGR 194
+ E + + T + +I A ++ V +LH + N+++ +
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 195 GLLSEAWRVFHEM-GEGCRDEI-SWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTM 252
L +A ++F M + C ++ ++N +I + + ++ LF EM G+ D T
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEI 312
+++ D + +M+ G + S L+D C + ++VF+ +
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD--GLCNNGKLEKALEVFDYM 421
Query: 313 SEP----DLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSS 368
+ D+ ++ TMI G + + +D F + G +P+ +++ + S L S
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKV-DDGWDLFCSLSLKGVKPNVVTYNTMISG---LCS 477
Query: 369 PSLGKQVHAL--AIKSDIPSNRVSVNNALVAMYSKCGN 404
L ++ +AL +K D P N L+ + + G+
Sbjct: 478 KRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 112/543 (20%), Positives = 236/543 (43%), Gaps = 62/543 (11%)
Query: 109 PRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKAC---REDVGLV 165
P P IV +N L++A A + + L ++ + + + G ++ C R + L
Sbjct: 81 PLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEI-VHGLYTYNILINCFCRRSQISLA 139
Query: 166 MQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGE-GCR-DEISWNAMIVA 223
+ L + GY +++L Y +S+A + +M E G R D I++ +I
Sbjct: 140 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199
Query: 224 CGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWN 283
+ EA+ L MV+ G + ++ T V+ D + +M
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM-------- 251
Query: 284 PHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQD 343
+ K+ E D+V++NT+I ++ + +DAL F++
Sbjct: 252 --------------------EAAKI-----EADVVIFNTIIDSLCKYRHV-DDALNLFKE 285
Query: 344 MQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCG 403
M+ G RP+ ++S + S + S Q+ + I+ I N V+ N AL+ + K G
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN-ALIDAFVKEG 344
Query: 404 NLHDARRVFDTMPEH----NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFI 459
+A +++D M + + + NS++ G+ H ++ Q+FE M+ +D P+ +T+
Sbjct: 345 KFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYN 404
Query: 460 SVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPF 519
+++ + +VE+G + F M + G+ + ++ ++ L G + A+++ + M
Sbjct: 405 TLIKGFCKSKRVEDGTELFREMSHR-GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 463
Query: 520 D---PGSIEWAALLGACRKHGNVELAVKAANKFLQLEPH-NAVPYVMLSNMYASAGRWEE 575
D P + ++ LL +G +E A++ + + E + Y + AG+ ++
Sbjct: 464 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Query: 576 SATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGY 635
+ + +GV KP + ++ S +++E + +L+KMK+ G
Sbjct: 524 GWDLFCSLSLKGV--KPNVV------TYNTMISGLCSKRLLQEAY----ALLKKMKEDGP 571
Query: 636 VPD 638
+P+
Sbjct: 572 LPN 574
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 99/492 (20%), Positives = 198/492 (40%), Gaps = 66/492 (13%)
Query: 82 VFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAVRLFK 137
+++YN +I+ + S + LA L ++ + P IV+ ++L+ + H AV L
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 138 EAREAGLCLDGFTLSGVI------KACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARY 191
+ E G D T + +I E V LV ++ Y V N + R
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR- 238
Query: 192 GGRGLLSEAWRVFHEMGEGCR---DEISWNAMIVACGQCREGKEALVLFGEMVRMGMKID 248
G A + ++M E + D + +N +I + + R +AL LF EM G++ +
Sbjct: 239 ---GDTDLALNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 249 MFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKV 308
+ T +S+++ + Q MI+ N N + LID + K ++ K+
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK--FVEAEKL 352
Query: 309 FEEIS----EPDLVLWNTMISGFSQHEDLS------------------------------ 334
++++ +PD+ +N++++GF H+ L
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 335 ----EDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVS 390
ED F++M G D +++ + + ++V + +P + ++
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 472
Query: 391 VNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLN-----SMITGYAQHGVEGESLQLFEL 445
+ L + + G L A VFD M + + + L+ +MI G + G + LF
Sbjct: 473 YSILLDGLCNN-GKLEKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530
Query: 446 MMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAG 505
+ + + PN +T+ +++S ++E MKE G P + ++ ++ R G
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED-GPLPNSGTYNTLIRAHLRDG 589
Query: 506 KLEEAERIIETM 517
+ +I M
Sbjct: 590 DKAASAELIREM 601
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 171/406 (42%), Gaps = 55/406 (13%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIP----RPDIVSYNTLIAAHAHRGEHGPAVRL 135
PN+ +Y +++ K LA L +++ D+V +NT+I + A+ L
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 282
Query: 136 FKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
FKE G+ + T S +I + LC Y G
Sbjct: 283 FKEMETKGIRPNVVTYSSLI----------------SCLCSY-----------------G 309
Query: 196 LLSEAWRVFHEMGEGCRDE--ISWNAMIVACGQCREGK--EALVLFGEMVRMGMKIDMFT 251
S+A ++ +M E + +++NA+I A +EGK EA L+ +M++ + D+FT
Sbjct: 310 RWSDASQLLSDMIEKKINPNLVTFNALIDAF--VKEGKFVEAEKLYDDMIKRSIDPDIFT 367
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEE 311
S++ F + L Q M+ + P V + + C + + D ++F E
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSK--DCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 312 ISE----PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLS 367
+S D V + T+I G H+ ++A F+ M G PD ++S + N
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLF-HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 484
Query: 368 SPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP----EHNTVSL 423
+V KS+I + + + ++ K G + D +F ++ + N V+
Sbjct: 485 KLEKALEVFDYMQKSEIKLD-IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 543
Query: 424 NSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTG 469
N+MI+G + E+ L + M ++ +PN+ T+ +++ A G
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 121/294 (41%), Gaps = 46/294 (15%)
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAVR 134
NPN+ ++NA+IDA VK A +L+D++ + PDI +YN+L+
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV-------------- 372
Query: 135 LFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGR 194
+GF + + ++ ++ CF + Y N ++ +
Sbjct: 373 ------------NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY-------NTLIKGFCKS 413
Query: 195 GLLSEAWRVFHEMGEG--CRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTM 252
+ + +F EM D +++ +I + A +F +MV G+ D+ T
Sbjct: 414 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 473
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEI 312
+ +L L ++ M KS + ++ + +I+ C + D +F +
Sbjct: 474 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE--GMCKAGKVDDGWDLFCSL 531
Query: 313 S----EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSA 362
S +P++V +NTMISG L E A + M+ G P+ +++ + A
Sbjct: 532 SLKGVKPNVVTYNTMISGLCSKRLLQE-AYALLKKMKEDGPLPNSGTYNTLIRA 584
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/509 (22%), Positives = 218/509 (42%), Gaps = 90/509 (17%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIPRPDI----VSYNTLIAAHAHRGEHGPAVRL 135
P V ++N ++D+C K L +++ E+ R +I V+YN LI + G+ A R
Sbjct: 236 PTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRF 295
Query: 136 FKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
+ R +G + ++ + +I+ Y +G
Sbjct: 296 HGDMRRSGFAVTPYSFNPLIEG---------------------------------YCKQG 322
Query: 196 LLSEAWRVFHEM-GEGCRDEIS-WNAMIVAC---GQCREGKEAL--------VLFGEMVR 242
L +AW V EM G S +N I A G+ + +E L V + ++
Sbjct: 323 LFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMH 382
Query: 243 MGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGM 302
+K+ F AS+L +DL G H ++ + LID C +
Sbjct: 383 GYIKMGKFVEASLL-----FDDLRAG-DIHPSIVTY---------NTLID--GLCESGNL 425
Query: 303 LDCMKVFEEISE----PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSC 358
++ EE++ PD++ + T++ GF ++ +LS A + +M R G +PD +++
Sbjct: 426 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSM-ATEVYDEMLRKGIKPDGYAYTT 484
Query: 359 VTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDA----RRVFDT 414
L ++H + +D + +++ N + K GNL A R++F
Sbjct: 485 RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRV 544
Query: 415 --MPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVE 472
+P+H V+ ++I GY ++G + L++ M+++ + P+ IT+ ++ A G++E
Sbjct: 545 GLVPDH--VTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLE 602
Query: 473 EGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERII-----ETMPFDPGSIEWA 527
+ +Y MK++ G+ P + ++ + +AG ++EA R + E +P P +
Sbjct: 603 QAFQYSTEMKKR-GVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIP--PNKYSYT 659
Query: 528 ALLGACRKHGNVELAVKAANKFL--QLEP 554
L+ E VK + L ++EP
Sbjct: 660 MLISKNCDFEKWEEVVKLYKEMLDKEIEP 688
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/429 (20%), Positives = 186/429 (43%), Gaps = 40/429 (9%)
Query: 184 CNAVLARYGGRGLLSEAWRVFHEMGEG--CRDEISWNAMIVACGQCREGKEALVLFGEMV 241
CN VL ++++A V+ M E I++N M+ +C + + + ++ EM
Sbjct: 206 CNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMK 265
Query: 242 RMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRG 301
R ++ T ++ F+ + +FHG M +SGF P+ + LI+ Y K +G
Sbjct: 266 RRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCK---QG 322
Query: 302 MLD-CMKVFEEISE----PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSF 356
+ D V +E+ P +N I + +DA M PD S+
Sbjct: 323 LFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRI-DDARELLSSMAA----PDVVSY 377
Query: 357 SCVTSACSNLSSPSLGKQVHALAIKSDIPSN----RVSVNNALVAMYSKCGNLHDARRVF 412
+ + +GK V A + D+ + + N L+ + GNL A+R+
Sbjct: 378 NTLMHGYI-----KMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLK 432
Query: 413 DTMPEH----NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHT 468
+ M + ++ +++ G+ ++G + ++++ M+++ I P+ + +
Sbjct: 433 EEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRL 492
Query: 469 GKVEEGQKYFNMMKEKFGIE---PEAKHFSCMVDLLGRAGKLEEA---ERIIETMPFDPG 522
G + K F + +E + P+ ++ +D L + G L +A +R I + P
Sbjct: 493 G---DSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPD 549
Query: 523 SIEWAALLGACRKHGNVELAVKAANKFLQ--LEPHNAVPYVMLSNMYASAGRWEESATVK 580
+ + ++ ++G ++A ++ L+ L P + + Y +L +A AGR E++
Sbjct: 550 HVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYP-SVITYFVLIYGHAKAGRLEQAFQYS 608
Query: 581 RLMRERGVK 589
M++RGV+
Sbjct: 609 TEMKKRGVR 617
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 160/382 (41%), Gaps = 40/382 (10%)
Query: 331 EDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVS 390
+ ++E L+ F+ M R GF P + + V + + V+ I+ I ++
Sbjct: 181 KSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVIT 240
Query: 391 VNNALVAMYSKCGNLHDARRVFDTMPEHNT----VSLNSMITGYAQHGVEGESLQLFELM 446
N L + + K G+L +++ M N V+ N +I G++++G E+ + M
Sbjct: 241 FNTMLDSCF-KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDM 299
Query: 447 MQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGK 506
+ +F ++ G ++ + M GI P ++ + L G+
Sbjct: 300 RRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNA-GIYPTTSTYNIYICALCDFGR 358
Query: 507 LEEAERIIETMPFDPGSIEWAALLGACRKHGNVELA--VKAANKFLQLEPHNAVPYVMLS 564
+++A ++ +M P + + L+ HG +++ V+A+ F L + P ++
Sbjct: 359 IDDARELLSSMA-APDVVSYNTLM-----HGYIKMGKFVEASLLFDDLRAGDIHPSIVTY 412
Query: 565 NMYAS----AGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIH 620
N +G E + +K M + + P I V FV ++ + M E++
Sbjct: 413 NTLIDGLCESGNLEGAQRLKEEMTTQLIF--PDV--ITYTTLVKGFV-KNGNLSMATEVY 467
Query: 621 EYMGEMLRK-MKQAGYVPDIRWALGKDEDVAAEEKERRLLYHSEKLAVAFGLISTKEGVP 679
+ EMLRK +K GY R A+G ++ + ++ H E +++T P
Sbjct: 468 D---EMLRKGIKPDGYAYTTR-AVG---ELRLGDSDKAFRLHEE-------MVATDHHAP 513
Query: 680 ILVVKNLRICGDCH--NAIKLI 699
L + N+RI G C N +K I
Sbjct: 514 DLTIYNVRIDGLCKVGNLVKAI 535
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 125/556 (22%), Positives = 231/556 (41%), Gaps = 69/556 (12%)
Query: 94 KHSHLHLARELFDEIPRP----DIVSYNTLIAAHAHRGEHGPAVRLFK------------ 137
+ S +A +L D+IP D+ +Y T++ A++ G++ A+ LF+
Sbjct: 187 RESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLV 246
Query: 138 ------------------------EAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAV 173
E R GL D FT S V+ AC + L FA
Sbjct: 247 TYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAE 306
Query: 174 L--CGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGC--RDEISWNAMIVACGQCRE 229
L CGY NA+L +G G+ +EA V EM E D +++N ++ A +
Sbjct: 307 LKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGF 366
Query: 230 GKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSG 289
KEA + M + G+ + T +V+ A+ ++ M ++G N +
Sbjct: 367 SKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNA 426
Query: 290 LIDMYSKCAPRG----MLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQ 345
++ + K + ML MK P+ WNTM++ ++ + + F++M+
Sbjct: 427 VLSLLGKKSRSNEMIKMLCDMK--SNGCSPNRATWNTMLA-LCGNKGMDKFVNRVFREMK 483
Query: 346 RAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNL 405
GF PD +F+ + SA S +++ ++ + V+ NAL+ ++ G+
Sbjct: 484 SCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNAC-VTTYNALLNALARKGDW 542
Query: 406 HDARRVFDTM------PEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFI 459
V M P + SL M+ YA+ G ++ + + I P+ +
Sbjct: 543 RSGENVISDMKSKGFKPTETSYSL--MLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLR 600
Query: 460 SVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPF 519
++L A + ++ F + K K G +P+ F+ M+ + R ++AE I+E++
Sbjct: 601 TLLLANFKCRALAGSERAFTLFK-KHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIRE 659
Query: 520 D---PGSIEWAALLGACRKHG---NVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRW 573
D P + + +L+ + G E +K K QL+P + V Y + + G
Sbjct: 660 DGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKS-QLKP-DLVSYNTVIKGFCRRGLM 717
Query: 574 EESATVKRLMRERGVK 589
+E+ + M ERG++
Sbjct: 718 QEAVRMLSEMTERGIR 733
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 188/451 (41%), Gaps = 57/451 (12%)
Query: 84 SYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAVRLFKEA 139
+YN ++ A V+ A + + + + P+ ++Y T+I A+ G+ A++LF
Sbjct: 353 TYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM 412
Query: 140 REAG----LCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
+EAG C LS + K R + ++++ C G S + N +LA G +G
Sbjct: 413 KEAGCVPNTCTYNAVLSLLGKKSRSNE--MIKMLCDMKSNGCSPNRATWNTMLALCGNKG 470
Query: 196 LLSEAWRVFHEMGEGC---RDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTM 252
+ RVF EM + C D ++N +I A G+C +A ++GEM R G + T
Sbjct: 471 MDKFVNRVFREM-KSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTY 529
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCA-------------- 298
++L A D G M GF S ++ Y+K
Sbjct: 530 NALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKE 589
Query: 299 ----PRGML------------------DCMKVFEEIS-EPDLVLWNTMISGFSQHEDLSE 335
P ML +F++ +PD+V++N+M+S F+++ ++ +
Sbjct: 590 GQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRN-NMYD 648
Query: 336 DALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNAL 395
A + ++ G PD +++ + +++ KS + + VS N +
Sbjct: 649 QAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYN-TV 707
Query: 396 VAMYSKCGNLHDARRVFDTMPEHNT----VSLNSMITGYAQHGVEGESLQLFELMMQEDI 451
+ + + G + +A R+ M E + N+ ++GY G+ E + E M + D
Sbjct: 708 IKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDC 767
Query: 452 VPNNITFISVLSACAHTGKVEEGQKYFNMMK 482
PN +TF V+ GK E + + +K
Sbjct: 768 RPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/460 (21%), Positives = 204/460 (44%), Gaps = 39/460 (8%)
Query: 83 FSYNAIIDACVKHSHLHLARELFDEIP----RPDIVSYNTLIAAHAHRGEHGPAVRLFKE 138
F+ + ++ AC + L A+E F E+ P V+YN L+ G + A+ + KE
Sbjct: 282 FTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKE 341
Query: 139 AREAGLCLDGFTLSGVIKA------CREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYG 192
E D T + ++ A +E G++ + V+ Y +V +A YG
Sbjct: 342 MEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDA----YG 397
Query: 193 GRGLLSEAWRVFHEMGE-GC-RDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMF 250
G EA ++F+ M E GC + ++NA++ G+ E + + +M G +
Sbjct: 398 KAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRA 457
Query: 251 TMASVLTAFTCLEDLAGGMQFHGRMIKS----GFNWNPHVGSGLIDMYSKCAPRGMLDCM 306
T ++L L G +F R+ + GF + + LI Y +C +D
Sbjct: 458 TWNTML----ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSE--VDAS 511
Query: 307 KVFEEISEPD----LVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSA 362
K++ E++ + +N +++ ++ D + DM+ GF+P + S+S +
Sbjct: 512 KMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENV-ISDMKSKGFKPTETSYSLMLQ- 569
Query: 363 CSNLSSPSLG-KQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH--- 418
C LG +++ + I + + + L+A + KC L + R F +H
Sbjct: 570 CYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANF-KCRALAGSERAFTLFKKHGYK 628
Query: 419 -NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKY 477
+ V NSM++ + ++ + ++ + E + ++ + P+ +T+ S++ G+ + ++
Sbjct: 629 PDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEI 688
Query: 478 FNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETM 517
+ EK ++P+ ++ ++ R G ++EA R++ M
Sbjct: 689 LKTL-EKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEM 727
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/452 (19%), Positives = 208/452 (46%), Gaps = 32/452 (7%)
Query: 215 ISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGR 274
+ +N ++ A + ++ + L +M +G++ D++T V+ F C ++ + G+
Sbjct: 86 VDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGK 145
Query: 275 MIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISE----PDLVLWNTMISGFSQH 330
M+K G+ + L++ + C + D + + +++ E PD+V +N +I +
Sbjct: 146 MLKLGYEPDRVTIGSLVNGF--CRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKT 203
Query: 331 EDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVS 390
+ ++ DA F++++R G RP+ +++ + + N S S ++ + IK I N ++
Sbjct: 204 KRVN-DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 391 VNNALVAMYSKCGNLHDARRVFDTMP----EHNTVSLNSMITGYAQHGVEGESLQLFELM 446
+ AL+ + K G + +A+ +F+ M + + V+ +S+I G H E+ Q+F+LM
Sbjct: 263 YS-ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 447 MQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGK 506
+ + + + +++ ++++ +VE+G K F M ++ G+ ++ ++ +AG
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR-GLVSNTVTYNTLIQGFFQAGD 380
Query: 507 LEEAERIIETMPF---DPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPH-NAVPYVM 562
+++A+ M F P + LLG +G +E A+ + E + V Y
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 563 LSNMYASAGRWEESATVKRLMRERGVKKK--------PGCSWIQIDNKVHVFVAEDSSHP 614
+ G+ EE+ ++ + +G+K G + ++V +
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Query: 615 MIKEI-------HEYMGEMLRKMKQAGYVPDI 639
++K E+++KM GY P +
Sbjct: 501 LMKNDCTLSDGDITLSAELIKKMLSCGYAPSL 532
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 191/450 (42%), Gaps = 69/450 (15%)
Query: 32 ISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAIIDA 91
IS GK + L I+ + + N F + L +L P+ + ++++
Sbjct: 105 ISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNG 164
Query: 92 CVKHSHLHLARELFDEIP----RPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLD 147
+ + + A L D++ +PDIV+YN +I + A FKE G+ +
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN 224
Query: 148 GFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEM 207
T + ++ +CN+ +R+ S+A R+ +M
Sbjct: 225 VVTYTALVNG-------------------------LCNS--SRW------SDAARLLSDM 251
Query: 208 --GEGCRDEISWNAMI---VACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCL 262
+ + I+++A++ V G+ E KE LF EMVRM + D+ T +S++ CL
Sbjct: 252 IKKKITPNVITYSALLDAFVKNGKVLEAKE---LFEEMVRMSIDPDIVTYSSLINGL-CL 307
Query: 263 ED-LAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDL---- 317
D + Q M+ G + + LI+ + C + + D MK+F E+S+ L
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGF--CKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 318 VLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSA-CSNLSSPSLGKQVH 376
V +NT+I GF Q D+ + A F M G PD +++ + C N G+
Sbjct: 366 VTYNTLIQGFFQAGDV-DKAQEFFSQMDFFGISPDIWTYNILLGGLCDN------GELEK 418
Query: 377 ALAIKSDIPSNRVSVN----NALVAMYSKCGNLHDARRVFDTMP----EHNTVSLNSMIT 428
AL I D+ + ++ ++ K G + +A +F ++ + + V+ +M++
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478
Query: 429 GYAQHGVEGESLQLFELMMQEDIVPNNITF 458
G G+ E L+ M QE ++ N+ T
Sbjct: 479 GLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 18/257 (7%)
Query: 18 TFTNLLK-QCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSF-- 74
T+T L+ C S R + L + K P+ S + K G + A+ F
Sbjct: 227 TYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA-FVKNGKVLEAKELFEE 285
Query: 75 --RLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAA--HAHR 126
R++ +P++ +Y+++I+ H + A ++FD + D+VSYNTLI A R
Sbjct: 286 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKR 345
Query: 127 GEHGPAVRLFKEAREAGLCLDGFTLSGVIKACRE--DVGLVMQLHCFAVLCGYSCYASVC 184
E G ++LF+E + GL + T + +I+ + DV + G S
Sbjct: 346 VEDG--MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTY 403
Query: 185 NAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGK--EALVLFGEMVR 242
N +L G L +A +F +M + D V G C+ GK EA LF +
Sbjct: 404 NILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSL 463
Query: 243 MGMKIDMFTMASVLTAF 259
G+K D+ T ++++
Sbjct: 464 KGLKPDIVTYTTMMSGL 480
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/508 (21%), Positives = 218/508 (42%), Gaps = 44/508 (8%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIP----RPDIVSYNTLIAAHAHRGEHGPAVRL 135
P+ YN +++ V + L L ++ +PD+ ++N LI A + PA+ +
Sbjct: 152 PDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211
Query: 136 FKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYAS--VCNAVLARYGG 193
++ GL D T + V++ E+ L L + + C S N ++ +
Sbjct: 212 LEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCK 271
Query: 194 RGLLSEAWRVFHEMGEG---CRDEISWNAMIVACGQCREG--KEALVLFGEMVRMGMKID 248
G + +A EM D+ ++N ++ G C+ G K A+ + M++ G D
Sbjct: 272 EGRVEDALNFIQEMSNQDGFFPDQYTFNTLV--NGLCKAGHVKHAIEIMDVMLQEGYDPD 329
Query: 249 MFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKV 308
++T SV++ L ++ ++ +MI + N + LI + C + + ++
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIS--TLCKENQVEEATEL 387
Query: 309 FEEISE----PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFS-CVTSAC 363
++ PD+ +N++I G + A+ F++M+ G PD+ +++ + S C
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRN-HRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 364 SNLSSPSLGKQVHALAIKSDIP----SNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH- 418
S GK AL + + + V N L+ + K +A +FD M H
Sbjct: 447 SK------GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 419 ---NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQ 475
N+V+ N++I G + ++ QL + M+ E P+ T+ S+L+ G +++
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAA 560
Query: 476 KYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAA----LLG 531
M G EP+ + ++ L +AG++E A +++ ++ ++ A + G
Sbjct: 561 DIVQAMTSN-GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQG 619
Query: 532 ACRKHGNVELAVKAANKFLQLEPHNAVP 559
RK E A N F ++ N P
Sbjct: 620 LFRKRKTTE----AINLFREMLEQNEAP 643
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 168/394 (42%), Gaps = 54/394 (13%)
Query: 210 GCRDEIS-WNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGG 268
G + ++S +N +I A + + + A+++ +M G+ D T +V+ + DL G
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 269 MQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFS 328
++ +M++ G +W+ V N ++ GF
Sbjct: 244 LRIREQMVEFGCSWSN---------------------------------VSVNVIVHGFC 270
Query: 329 QHEDLSEDALICFQDM-QRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSN 387
+ E EDAL Q+M + GF PD +F+ + + ++ + ++ +
Sbjct: 271 K-EGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD 329
Query: 388 RVSVNNALVAMYSKCGNLHDARRVFDTMPEH----NTVSLNSMITGYAQHGVEGESLQLF 443
V N++++ K G + +A V D M NTV+ N++I+ + E+ +L
Sbjct: 330 -VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 444 ELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGR 503
++ + I+P+ TF S++ T + F M+ K G EP+ ++ ++D L
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK-GCEPDEFTYNMLIDSLCS 447
Query: 504 AGKLEEAERIIETMPFD---PGSIEWAALL-GACRKHGNVELAVKAANKFLQLEPH---- 555
GKL+EA +++ M I + L+ G C+ + E A F ++E H
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTRE----AEEIFDEMEVHGVSR 503
Query: 556 NAVPYVMLSNMYASAGRWEESATVKRLMRERGVK 589
N+V Y L + + R E++A + M G K
Sbjct: 504 NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 155/388 (39%), Gaps = 59/388 (15%)
Query: 79 NPNVFSYNAIIDACVKHSHLH----LARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVR 134
+PN +YN +I K + + LAR L + PD+ ++N+LI H A+
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 421
Query: 135 LFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVC--NAVLARYG 192
LF+E R G D FT + +I + L L+ + C SV N ++ +
Sbjct: 422 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC 481
Query: 193 GRGLLSEAWRVFHEMGEG--CRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMF 250
EA +F EM R+ +++N +I + R ++A L +M+ G K D +
Sbjct: 482 KANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKY 541
Query: 251 TMASVLTAF-------------------TCLEDL------------AGGMQFHGRMIKS- 278
T S+LT F C D+ AG ++ ++++S
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
Query: 279 ---GFNWNPHVGSGLID-MYSKCAPRGMLDCMKVFEEISE-----PDLVLWNTMISGFSQ 329
G N PH + +I ++ K R + + +F E+ E PD V + + G
Sbjct: 602 QMKGINLTPHAYNPVIQGLFRK---RKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCN 658
Query: 330 HEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLS-SPSLGKQVHALAIKSDIPSNR 388
+A+ ++ GF P+ S + LS +L K V+ + K+
Sbjct: 659 GGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEE 718
Query: 389 VSVNNALVAM------YSKCGNLHDARR 410
VS+ L+ + + G + D+R+
Sbjct: 719 VSMVKGLLKIRKFQDALATLGGVLDSRQ 746
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 112/261 (42%), Gaps = 14/261 (5%)
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDE-IPR---PDIVSYNTLIAAHAHRGEHGPAVR 134
+P+V++YN++I K + A E+ D+ I R P+ V+YNTLI+ + A
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 135 LFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYAS--VCNAVLARYG 192
L + G+ D T + +I+ + + F + C N ++
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 193 GRGLLSEAWRVFHEMG-EGC-RDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMF 250
+G L EA + +M GC R I++N +I + + +EA +F EM G+ +
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506
Query: 251 TMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFE 310
T +++ + Q +MI G + + + L+ + C + + +
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHF--CRGGDIKKAADIVQ 564
Query: 311 EIS----EPDLVLWNTMISGF 327
++ EPD+V + T+ISG
Sbjct: 565 AMTSNGCEPDIVTYGTLISGL 585
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 127/280 (45%), Gaps = 21/280 (7%)
Query: 323 MISGFSQHEDLSEDALICFQD--MQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHA--- 377
+I ++Q E +D ++ D + G +PD ++ + + + +S L + HA
Sbjct: 124 LIESYAQFE--LQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMS 181
Query: 378 -LAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTV----SLNSMITGYAQ 432
IK D VS N L+ + L A + + MP + V + +++ GY +
Sbjct: 182 VWGIKPD-----VSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIE 236
Query: 433 HGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAK 492
G +L++ E M++ +N++ ++ G+VE+ + M + G P+
Sbjct: 237 EGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQY 296
Query: 493 HFSCMVDLLGRAGKLEEAERIIETM---PFDPGSIEWAALLGACRKHGNVELAVKAANKF 549
F+ +V+ L +AG ++ A I++ M +DP + +++ K G V+ AV+ ++
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 550 LQLE-PHNAVPYVMLSNMYASAGRWEESATVKRLMRERGV 588
+ + N V Y L + + EE+ + R++ +G+
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 194/438 (44%), Gaps = 51/438 (11%)
Query: 197 LSEAWRVFHEMGE-GC-RDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
+ A + +M + GC + + + +I + +C EAL L EM MG D T
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMK-VFEEIS 313
V+ + + + RM+ GF + L++ K G +D K +F I
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKI---GRVDAAKDLFYRIP 349
Query: 314 EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRA-GFRPDDCSFSCV------------- 359
+P++V++NT+I GF H L +DA DM + G PD C+++ +
Sbjct: 350 KPEIVIFNTLIHGFVTHGRL-DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 360 --------TSACS-NLSSPS--------LGKQVHALAIKSDIPSNRVSVN----NALVAM 398
C N+ S + LGK A + +++ ++ + N N L++
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 399 YSKCGNLHDARRVFDTMPEH----NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPN 454
+ K + +A +F MP + + NS+I+G + +L L M+ E +V N
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Query: 455 NITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERII 514
+T+ ++++A G+++E +K N M + G + ++ ++ L RAG++++A +
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQ-GSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 515 ETMPFD---PGSIEWAALLGACRKHGNVELAVKAANKF-LQLEPHNAVPYVMLSNMYASA 570
E M D P +I L+ + G VE AV+ + L+ + V + L N A
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 571 GRWEESATVKRLMRERGV 588
GR E+ T+ R ++ G+
Sbjct: 648 GRIEDGLTMFRKLQAEGI 665
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/416 (21%), Positives = 190/416 (45%), Gaps = 24/416 (5%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKE- 138
P+ +Y +++ K + A++LF IP+P+IV +NTLI G A + +
Sbjct: 320 PDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDM 379
Query: 139 AREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYG--GRGL 196
G+ D T + +I ++ + + L + C +V + + G G
Sbjct: 380 VTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK 439
Query: 197 LSEAWRVFHEM-GEGCR-DEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
+ EA+ V +EM +G + + + +N +I A + EA+ +F EM R G K D++T S
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGML-DCMKVFEEI- 312
+++ ++++ + MI G N + LI+ + + RG + + K+ E+
Sbjct: 500 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR---RGEIKEARKLVNEMV 556
Query: 313 ---SEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSAC--SNLS 367
S D + +N++I G + ++ + A F+ M R G P + S + + + S +
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEV-DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMV 615
Query: 368 SPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH----NTVSL 423
++ Q + ++ P + N+L+ + G + D +F + +TV+
Sbjct: 616 EEAVEFQ-KEMVLRGSTPD--IVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTF 672
Query: 424 NSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFN 479
N++++ + G ++ L + +++ VPN+ T+ S+L + + ++++N
Sbjct: 673 NTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW-SILLQSIIPQETLDRRRFYN 727
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 116/536 (21%), Positives = 240/536 (44%), Gaps = 49/536 (9%)
Query: 65 GTLDNARTSFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLI 120
G L+ + F++ NP+ +YN I+ A K L +EL ++ + P+ V+YN L+
Sbjct: 225 GMLERMVSEFKV--NPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLV 282
Query: 121 AAHAHRGEHGPAVRLFKEAREAG----LCLDGFTLSGVIKA--CREDVGLVMQLHCFAVL 174
+ G A ++ + ++ LC ++G+ A RE + L+ + +
Sbjct: 283 YGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQ 342
Query: 175 CGYSCYASVCNAVLARYGGRGLLSEAWRVFHEM-GEGCR-DEISWNAMIVACGQCREGKE 232
Y ++ + GL EA ++ +M +G + ++++ N I C+E K
Sbjct: 343 PDVVTYNTLIDGCFEL----GLSLEARKLMEQMENDGVKANQVTHN--ISLKWLCKEEKR 396
Query: 233 ALVL--FGEMVRM-GMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSG 289
V E+V M G D+ T +++ A+ + DL+G ++ M + G N +
Sbjct: 397 EAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNT 456
Query: 290 LIDMYSKCAPRGMLDCMKVFEEISEP----DLVLWNTMISGFSQHEDLSEDALICFQDMQ 345
++D + C R + + + + D V + T+I GF + E + E AL + +M+
Sbjct: 457 ILD--ALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKV-EKALEMWDEMK 513
Query: 346 RAGFRPDDCSF-SCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGN 404
+ P +F S + C + + ++ LA +P + S N+++ Y K G
Sbjct: 514 KVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDD--STFNSIILGYCKEGR 571
Query: 405 LHDARRVFDTMPEH----NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFIS 460
+ A ++ +H + + N ++ G + G+ ++L F +++E V + +T+ +
Sbjct: 572 VEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNT 630
Query: 461 VLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFD 520
++SA K++E + M+EK G+EP+ ++ + LL GKL E + +++
Sbjct: 631 MISAFCKDKKLKEAYDLLSEMEEK-GLEPDRFTYNSFISLLMEDGKLSETDELLK----- 684
Query: 521 PGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHN-AVPYVMLSNMYASAGRWEE 575
+++ G+ ++ VE A + E + A+ Y + + S GR +E
Sbjct: 685 ----KFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKE 736
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 113/533 (21%), Positives = 204/533 (38%), Gaps = 73/533 (13%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T+ +LK + +S K L K + + N+ Y K G+L A L
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301
Query: 78 NNPNVF----SYNAIIDACVKHSHLHLARELFDEIP----RPDIVSYNTLIAAHAHRGEH 129
NV +YN +I+ + EL D + +PD+V+YNTLI G
Sbjct: 302 KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLS 361
Query: 130 GPAVRLFKEAREAGLCLDGFTLSGVIK-ACREDV--GLVMQLHCFAVLCGYSCYASVCNA 186
A +L ++ G+ + T + +K C+E+ + ++ + G+S +
Sbjct: 362 LEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHT 421
Query: 187 VLARYGGRGLLSEAWRVFHEMGE-GCR-DEISWNAMIVACGQCREGKEALVLFGEMVRMG 244
++ Y G LS A + EMG+ G + + I+ N ++ A + R+ EA L + G
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481
Query: 245 MKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD 304
+D T +++ F E + ++ M K
Sbjct: 482 FIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKIT----------------------- 518
Query: 305 CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACS 364
P + +N++I G H +E A+ F ++ +G PDD +F+ +
Sbjct: 519 ----------PTVSTFNSLIGGLCHHGK-TELAMEKFDELAESGLLPDDSTFNSIILGYC 567
Query: 365 NLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH---NTV 421
+ + +IK + + N L + K G A F+T+ E +TV
Sbjct: 568 KEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL-CKEGMTEKALNFFNTLIEEREVDTV 626
Query: 422 SLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMM 481
+ N+MI+ + + E+ L M ++ + P+ T+ S +S GK+ E +
Sbjct: 627 TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686
Query: 482 KEKFG----------------------IEPEAKHFSCMVDLLGRAGKLEEAER 512
KFG + EA +S ++D L G+L+E R
Sbjct: 687 SGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSR 739
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 113/555 (20%), Positives = 224/555 (40%), Gaps = 102/555 (18%)
Query: 61 YSKCGTLDNARTSF----RLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIP-----RP 111
Y ++ +AR F ++ + NV ++N +++ L A + + + P
Sbjct: 179 YPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNP 238
Query: 112 DIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLD---------GFTLSGVIKACREDV 162
D V+YNT++ A + +G L + ++ GL + G+ G +K + V
Sbjct: 239 DNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV 298
Query: 163 GLVMQLHCFAVLCGYSCYAS-VCNAVLARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMI 221
L+ Q + LC Y+ + +CNA R G L +A + D +++N +I
Sbjct: 299 ELMKQTNVLPDLCTYNILINGLCNAGSMREGLE--LMDAMKSLKLQP----DVVTYNTLI 352
Query: 222 VACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFN 281
C + EA L +M G+K + T ++ + C E+ + R +K
Sbjct: 353 DGCFELGLSLEARKLMEQMENDGVKANQVT-HNISLKWLCKEEKREAVT---RKVKE--- 405
Query: 282 WNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICF 341
L+DM+ PD+V ++T+I + + DLS AL
Sbjct: 406 --------LVDMHG-----------------FSPDIVTYHTLIKAYLKVGDLS-GALEMM 439
Query: 342 QDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSK 401
++M + G I N +++N L A+ K
Sbjct: 440 REMGQKG-----------------------------------IKMNTITLNTILDAL-CK 463
Query: 402 CGNLHDARRVFDTMPEH----NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNIT 457
L +A + ++ + + V+ ++I G+ + ++L++++ M + I P T
Sbjct: 464 ERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVST 523
Query: 458 FISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEA-ERIIET 516
F S++ H GK E + F+ + E G+ P+ F+ ++ + G++E+A E E+
Sbjct: 524 FNSLIGGLCHHGKTELAMEKFDELAES-GLLPDDSTFNSIILGYCKEGRVEKAFEFYNES 582
Query: 517 MP--FDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWE 574
+ F P + LL K G E A+ N ++ + V Y + + + + +
Sbjct: 583 IKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLK 642
Query: 575 ESATVKRLMRERGVK 589
E+ + M E+G++
Sbjct: 643 EAYDLLSEMEEKGLE 657
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 129/293 (44%), Gaps = 24/293 (8%)
Query: 314 EPDLVLWNTMISGFSQHEDL--SEDALICFQDMQRAGFRPDDCSFSCVTSA--CSNLSSP 369
+P+L+ NT++ G ++ A F DM + G + +F+ + +
Sbjct: 163 KPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLED 222
Query: 370 SLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH----NTVSLNS 425
+LG + + + + + V+ N L AM SK G L D + + M ++ N V+ N+
Sbjct: 223 ALG-MLERMVSEFKVNPDNVTYNTILKAM-SKKGRLSDLKELLLDMKKNGLVPNRVTYNN 280
Query: 426 MITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKF 485
++ GY + G E+ Q+ ELM Q +++P+ T+ +++ + G + EG + + MK
Sbjct: 281 LVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMK-SL 339
Query: 486 GIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPG---------SIEWAALLGACRKH 536
++P+ ++ ++D G EA +++E M D S++W L K
Sbjct: 340 KLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKW---LCKEEKR 396
Query: 537 GNVELAVKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVK 589
V VK P + V Y L Y G + + R M ++G+K
Sbjct: 397 EAVTRKVKELVDMHGFSP-DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIK 448
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/383 (19%), Positives = 183/383 (47%), Gaps = 21/383 (5%)
Query: 197 LSEAWRVFHEMGEG--CRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMAS 254
++A +F +M E + ++ +++A + + + + LF + +G+ D+++ +
Sbjct: 60 FNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTT 119
Query: 255 VLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEIS- 313
++ F L+ + G+M+K GF + L++ + C + M + ++I
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGF--CHVNRFYEAMSLVDQIVG 177
Query: 314 ---EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPS 370
EP++V++NT+I + ++ AL + M++ G RPD +++ + + + +
Sbjct: 178 LGYEPNVVIYNTIIDSLCEKGQVNT-ALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWG 236
Query: 371 LGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH----NTVSLNSM 426
+ ++ + ++ I + ++ + AL+ +Y K G L +A++ ++ M + N V+ NS+
Sbjct: 237 VSARILSDMMRMGISPDVITFS-ALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295
Query: 427 ITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFG 486
I G HG+ E+ ++ +++ + PN +T+ ++++ +V++G K +M G
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRD-G 354
Query: 487 IEPEAKHFSCMVDLLGRAGKLEEAERIIETMP---FDPGSIEWAALLGACRKHGNVELAV 543
++ + ++ + +AGK AE+++ M P + LL HG +
Sbjct: 355 VDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIG--- 411
Query: 544 KAANKFLQLEPHNAVPYVMLSNM 566
KA + L+ V ++ N+
Sbjct: 412 KALVRLEDLQKSKTVVGIITYNI 434
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/426 (19%), Positives = 175/426 (41%), Gaps = 17/426 (3%)
Query: 109 PRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQL 168
P P IV ++ L+ A A ++ + LF+ G+ D ++ + +I L + L
Sbjct: 75 PLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLAL 134
Query: 169 HCFAVL--CGYSCYASVCNAVLARYGGRGLLSEAWRVFHEM-GEGCR-DEISWNAMIVAC 224
C + G+ +++ + EA + ++ G G + + +N +I +
Sbjct: 135 SCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSL 194
Query: 225 GQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNP 284
+ + AL + M +MG++ D+ T S++T + M++ G + +
Sbjct: 195 CEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDV 254
Query: 285 HVGSGLIDMYSKCAPRGMLDCMKVFEEISE----PDLVLWNTMISGFSQHEDLSEDALIC 340
S LID+Y K +L+ K + E+ + P++V +N++I+G H L ++A
Sbjct: 255 ITFSALIDVYGKEGQ--LLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIH-GLLDEAKKV 311
Query: 341 FQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYS 400
+ GF P+ +++ + + G ++ + + + + + N L Y
Sbjct: 312 LNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTY-NTLYQGYC 370
Query: 401 KCGNLHDARRVFDTMPE----HNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNI 456
+ G A +V M + + N ++ G HG G++L E + + V I
Sbjct: 371 QAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGII 430
Query: 457 TFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIET 516
T+ ++ KVE+ F + K G+ P+ + M+ L R EA +
Sbjct: 431 TYNIIIKGLCKADKVEDAWYLFCSLALK-GVSPDVITYITMMIGLRRKRLWREAHELYRK 489
Query: 517 MPFDPG 522
M + G
Sbjct: 490 MQKEDG 495
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 127/289 (43%), Gaps = 15/289 (5%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIP----RPDIVSYNTLIAAHAHRGEHGPAVRL 135
PNV YN IID+ + ++ A ++ + RPD+V+YN+LI H G G + R+
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 136 FKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVC--NAVLARYGG 193
+ G+ D T S +I ++ L+ + + S ++ N+++
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI 301
Query: 194 RGLLSEAWRVFHEM-GEG-CRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFT 251
GLL EA +V + + +G + +++N +I + + + + + M R G+ D FT
Sbjct: 302 HGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFT 361
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEE 311
++ + + + GRM+ G + + + + L+D C + + E+
Sbjct: 362 YNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLD--GLCDHGKIGKALVRLED 419
Query: 312 ISEPDLVL----WNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSF 356
+ + V+ +N +I G + D EDA F + G PD ++
Sbjct: 420 LQKSKTVVGIITYNIIIKGLCK-ADKVEDAWYLFCSLALKGVSPDVITY 467
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 213/476 (44%), Gaps = 50/476 (10%)
Query: 86 NAIIDACVKHSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLC 145
N I+D V + + L + P P + +N L +A A ++ + K G+
Sbjct: 44 NGIVDIKVNDA-IDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIE 102
Query: 146 LDGFTLSGVIKA-CREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVF 204
D +T++ +I CR+ L F+VL GR AW++
Sbjct: 103 HDMYTMTIMINCYCRKK----KLLFAFSVL------------------GR-----AWKLG 135
Query: 205 HEMGEGCRDEISWNAMIVACGQCREGK--EALVLFGEMVRMGMKIDMFTMASVLTAFTCL 262
+E D I+++ ++ G C EG+ EA+ L MV M + D+ T+++++
Sbjct: 136 YE-----PDTITFSTLV--NGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLK 188
Query: 263 EDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGM-LDCMKVFEEIS-EPDLVLW 320
++ + RM++ GF + +++ K + LD + EE + + +V +
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248
Query: 321 NTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAI 380
+ +I + +DAL F +M+ G + D ++S + N G ++ I
Sbjct: 249 SIVIDSLCKDGSF-DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 381 KSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH----NTVSLNSMITGYAQHGVE 436
+I + V+ + AL+ ++ K G L +A+ +++ M +T++ NS+I G+ +
Sbjct: 308 GRNIIPDVVTFS-ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 437 GESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSC 496
E+ Q+F+LM+ + P+ +T+ ++++ +V++G + F + K G+ P ++
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK-GLIPNTITYNT 425
Query: 497 MVDLLGRAGKLEEAERIIETMP---FDPGSIEWAALLGACRKHGNVELAVKAANKF 549
+V ++GKL A+ + + M P + + LL +G + A++ K
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 196/480 (40%), Gaps = 61/480 (12%)
Query: 73 SFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEI----PRPDIVSYNTLIAAHAHRGE 128
+++L P+ +++ +++ + A L D + RPD+V+ +TLI +G
Sbjct: 131 AWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR 190
Query: 129 HGPAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVL 188
A+ L E G D T Y V N L
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVT-----------------------------YGPVLNR-L 220
Query: 189 ARYGGRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGK--EALVLFGEMVRMGMK 246
+ G L A +F +M E IV C++G +AL LF EM G+K
Sbjct: 221 CKSGNSAL---ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK 277
Query: 247 IDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVG--SGLIDMYSKCAPRGMLD 304
D+ T +S++ G + MI G N P V S LID++ K +L+
Sbjct: 278 ADVVTYSSLIGGLCNDGKWDDGAKMLREMI--GRNIIPDVVTFSALIDVFVKEGK--LLE 333
Query: 305 CMKVFEEISE----PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSC-V 359
+++ E+ PD + +N++I GF + L E A F M G PD ++S +
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE-ANQMFDLMVSKGCEPDIVTYSILI 392
Query: 360 TSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH- 418
S C + ++ K IP N ++ N LV + + G L+ A+ +F M
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIP-NTITYN-TLVLGFCQSGKLNAAKELFQEMVSRG 450
Query: 419 ---NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQ 475
+ V+ ++ G +G ++L++FE M + + + ++ + KV++
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAW 510
Query: 476 KYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFD---PGSIEWAALLGA 532
F + +K G++P+ ++ M+ L + G L EA+ + M D P + L+ A
Sbjct: 511 SLFCSLSDK-GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 109/261 (41%), Gaps = 47/261 (18%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIP----RPDIVSYNTLIAAHAHRGEHGPAVRL 135
P+ +YN++ID K + LH A ++FD + PDIV+Y+ LI ++ +RL
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 136 FKEAREAGLCLD---------GFTLSGVIKACRE------DVGLVMQLHCFAVLCGYSCY 180
F+E GL + GF SG + A +E G+ + + +L C
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 181 ASVCNAVLARYG---------GRGL-------------LSEAWRVFHEMGE-GCR-DEIS 216
N L + G G+ + +AW +F + + G + D ++
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 217 WNAMIVACGQCREG--KEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGR 274
+N MI G C++G EA +LF +M G D FT ++ A L ++
Sbjct: 528 YNVMI--GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEE 585
Query: 275 MIKSGFNWNPHVGSGLIDMYS 295
M GF+ + +IDM S
Sbjct: 586 MKVCGFSADSSTIKMVIDMLS 606
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 134/626 (21%), Positives = 236/626 (37%), Gaps = 117/626 (18%)
Query: 55 NHFTLLYSKCGTLDNARTSFRLTN--------NPNVFSYNAIIDACVKHSHLHLARELFD 106
N F L++ + + + S RL PN Y +I + L E+FD
Sbjct: 106 NDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFD 165
Query: 107 EIPRP----DIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACRED- 161
E+P + SY LI A+ G + ++ L + + T + VI AC
Sbjct: 166 EMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGG 225
Query: 162 ------VGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEG--CRD 213
+GL ++ + Y N +L+ RGL EA VF M +G D
Sbjct: 226 LDWEGLLGLFAEMRHEGIQPDIVTY----NTLLSACAIRGLGDEAEMVFRTMNDGGIVPD 281
Query: 214 EISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHG 273
+++ ++ G+ R ++ L GEM G D+ + +L A+ + M
Sbjct: 282 LTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFH 341
Query: 274 RMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEI----SEPDLVLWNTMISGFSQ 329
+M +G N + S L++++ + D ++F E+ ++PD +N +I F +
Sbjct: 342 QMQAAGCTPNANTYSVLLNLFGQSGRYD--DVRQLFLEMKSSNTDPDAATYNILIEVFGE 399
Query: 330 HEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRV 389
E + F DM PD ++ + AC GK
Sbjct: 400 GGYFKE-VVTLFHDMVEENIEPDMETYEGIIFAC--------GK---------------- 434
Query: 390 SVNNALVAMYSKCGNLH-DARRVFDTMPEHNTVSLNSMITG----YAQHGVEGESLQLFE 444
G LH DAR++ M ++ V + TG + Q + E+L F
Sbjct: 435 -------------GGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFN 481
Query: 445 LMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRA 504
M + P+ TF S+L + A G V+E + + + + GI F+ ++ +
Sbjct: 482 TMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDS-GIPRNRDTFNAQIEAYKQG 540
Query: 505 GKLEEAERI---IETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVP-- 559
GK EEA + +E DP A+L + L + +F +++ + +P
Sbjct: 541 GKFEEAVKTYVDMEKSRCDPDERTLEAVLSV---YSFARLVDECREQFEEMKASDILPSI 597
Query: 560 --YVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIK 617
Y M+ +Y RW++ V L+ E + N+V
Sbjct: 598 MCYCMMLAVYGKTERWDD---VNELLEE------------MLSNRV-------------S 629
Query: 618 EIHEYMGEMLRKMKQAGYVPDIRWAL 643
IH+ +G+M++ Y D W +
Sbjct: 630 NIHQVIGQMIK----GDYDDDSNWQI 651
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 153/318 (48%), Gaps = 41/318 (12%)
Query: 290 LIDMYSKCAPRGML-DCMKVFE-EISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRA 347
LI+ S PRG + C+ +F+ ++S D L + F+ D + +L F+ MQR
Sbjct: 79 LINKLSSLPPRGSIARCLDIFKNKLSLNDFAL---VFKEFAGRGDW-QRSLRLFKYMQRQ 134
Query: 348 GF-RPDDCSFSCVTSACSNLSSPSLGKQ---VHALAIKSDIPSNRVSVN----NALVAMY 399
+ +P++ ++ + S LG++ L + ++PS VS + AL+ Y
Sbjct: 135 IWCKPNEHIYTIMISL--------LGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAY 186
Query: 400 SKCGNLHDARRVFDTMPEH----NTVSLNSMITGYAQHGVEGESL-QLFELMMQEDIVPN 454
+ G + + D M + ++ N++I A+ G++ E L LF M E I P+
Sbjct: 187 GRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPD 246
Query: 455 NITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERII 514
+T+ ++LSACA G +E + F M + GI P+ +S +V+ G+ +LE+ ++
Sbjct: 247 IVTYNTLLSACAIRGLGDEAEMVFRTMNDG-GIVPDLTTYSHLVETFGKLRRLEKVCDLL 305
Query: 515 ETMPFD---PGSIEWAALLGACRKHGNVELAVKAANKFLQLEPH----NAVPYVMLSNMY 567
M P + LL A K G+++ +A F Q++ NA Y +L N++
Sbjct: 306 GEMASGGSLPDITSYNVLLEAYAKSGSIK---EAMGVFHQMQAAGCTPNANTYSVLLNLF 362
Query: 568 ASAGRWEESATVKRLMRE 585
+GR+++ V++L E
Sbjct: 363 GQSGRYDD---VRQLFLE 377
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 104/482 (21%), Positives = 204/482 (42%), Gaps = 68/482 (14%)
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAVRLF 136
N+++Y+ I+ + S L LA + ++ + P IV+ N+L+ H AV L
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 137 KEAREAGLCLDGFTLSGVI------KACREDVGLVMQLHCFAVLCGYSCYASVCNAVLAR 190
+ E G D T + ++ E V LV ++ Y +V N + R
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228
Query: 191 YGGRGLLSEAWRVFHEMGEGC--RDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKID 248
G A + ++M +G D + +N +I + + +A LF +M G+K D
Sbjct: 229 ----GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 284
Query: 249 MFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKV 308
+FT +++ + + M++ N + + LID + K +++ K+
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK--LVEAEKL 342
Query: 309 FEEISE-----PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSAC 363
++E+ + PD+V +NT+I GF +++ + E+ + F++M + G + +++ +
Sbjct: 343 YDEMVKSKHCFPDVVAYNTLIKGFCKYKRV-EEGMEVFREMSQRGLVGNTVTYTTL---- 397
Query: 364 SNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH----N 419
+H D C N A+ VF M +
Sbjct: 398 -----------IHGFFQARD------------------CDN---AQMVFKQMVSDGVHPD 425
Query: 420 TVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFN 479
++ N ++ G +G +L +FE M + D+ + +T+ +++ A GKVE+G F
Sbjct: 426 IMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFC 485
Query: 480 MMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFD---PGSIEWAALLGACRKH 536
+ K G++P ++ M+ R G EEA+ + M D P S + L+ A +
Sbjct: 486 SLSLK-GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRD 544
Query: 537 GN 538
G+
Sbjct: 545 GD 546
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 78/293 (26%)
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIPR-----PDIVSYNTLIAAHAHRGEHGPAV 133
NP++ +NA+IDA VK L A +L+DE+ + PD+V+YNTLI +
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGM 376
Query: 134 RLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGG 193
+F+E + GL + T + +I G C
Sbjct: 377 EVFREMSQRGLVGNTVTYTTLIH------GFFQARDC----------------------- 407
Query: 194 RGLLSEAWRVFHEM-GEGCRDEI-SWNAMIVACGQCREG--KEALVLFGEMVRMGMKIDM 249
A VF +M +G +I ++N I+ G C G + ALV+F M + MK+D+
Sbjct: 408 ----DNAQMVFKQMVSDGVHPDIMTYN--ILLDGLCNNGNVETALVVFEYMQKRDMKLDI 461
Query: 250 FTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVF 309
T +++ A + G W D++ + +G+
Sbjct: 462 VTYTTMIEALCKAGKVEDG-------------W---------DLFCSLSLKGV------- 492
Query: 310 EEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSA 362
+P++V + TM+SGF + + L E+A F +M+ G P+ +++ + A
Sbjct: 493 ----KPNVVTYTTMMSGFCR-KGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 122/591 (20%), Positives = 242/591 (40%), Gaps = 108/591 (18%)
Query: 69 NARTSFRLTNNPNVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHA 124
N F L + YN ++++ + + ++++ E+ P+I +YN ++ +
Sbjct: 170 NKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYC 229
Query: 125 HRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVC 184
G A + + EAGL D FT + +I
Sbjct: 230 KLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMG--------------------------- 262
Query: 185 NAVLARYGGRGLLSEAWRVFHEMG-EGC-RDEISWNAMIVACGQCREGKEALVLFGEMVR 242
Y R L A++VF+EM +GC R+E+++ +I R EA+ LF +M
Sbjct: 263 ------YCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKD 316
Query: 243 MGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLID-MYSKCAPRG 301
+ T ++ + E + + M ++G N H + LID + S+C
Sbjct: 317 DECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEK 376
Query: 302 MLDCM-KVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVT 360
+ + ++ E+ P+++ +N +I+G+ + + EDA+ + M+ P+ ++
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKR-GMIEDAVDVVELMESRKLSPNTRTY---- 431
Query: 361 SACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH-- 418
N L+ Y K N+H A V + M E
Sbjct: 432 --------------------------------NELIKGYCK-SNVHKAMGVLNKMLERKV 458
Query: 419 --NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQK 476
+ V+ NS+I G + G + +L LM +VP+ T+ S++ + + +VEE
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 477 YFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFD---PGSIEWAALLGAC 533
F+ +++K G+ P ++ ++D +AGK++EA ++E M P S+ + AL+
Sbjct: 519 LFDSLEQK-GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 577
Query: 534 RKHGNVELAVKAANKFLQ--LEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKK 591
G ++ A K ++ L+P + +++ + G ++ + + + M G K
Sbjct: 578 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD-GDFDHAYSRFQQMLSSGTKPD 636
Query: 592 PG--CSWIQID-NKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYVPDI 639
++IQ + + AED M+ KM++ G PD+
Sbjct: 637 AHTYTTFIQTYCREGRLLDAED---------------MMAKMRENGVSPDL 672
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 113/519 (21%), Positives = 204/519 (39%), Gaps = 75/519 (14%)
Query: 18 TFTNLLKQCISQRDISTGKSLHALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLT 77
T+T L+ SQ + L ++ + + N Y K G +++A L
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 78 NN----PNVFSYNAIIDACVK---HSHLHLARELFDEIPRPDIVSYNTLIAAHAHRGEHG 130
+ PN +YN +I K H + + ++ + PD+V+YN+LI G
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 131 PAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVL--CGYSCYASVCNAVL 188
A RL + GL D +T + +I + + + F L G + + A++
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Query: 189 ARYGGRGLLSEAWRVFHEM-GEGC-RDEISWNAMIVACGQCREGK--EALVLFGEMVRMG 244
Y G + EA + +M + C + +++NA+I G C +GK EA +L +MV++G
Sbjct: 540 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIH--GLCADGKLKEATLLEEKMVKIG 597
Query: 245 MKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD 304
++ + T ++ D +M+ SG + H + I Y C +LD
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY--CREGRLLD 655
Query: 305 CMKVFEEISE----PDLVLWNTMISGFSQHEDLSED--ALICFQDMQRAGFRPDDCSFSC 358
+ ++ E PDL ++++I G+ DL + A + M+ G P +F
Sbjct: 656 AEDMMAKMRENGVSPDLFTYSSLIKGYG---DLGQTNFAFDVLKRMRDTGCEPSQHTF-- 710
Query: 359 VTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH 418
S +L GKQ K P L AM M E
Sbjct: 711 -LSLIKHLLEMKYGKQ------KGSEPE--------LCAM--------------SNMMEF 741
Query: 419 NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYF 478
+TV ++L E M++ + PN ++ ++ G + +K F
Sbjct: 742 DTV------------------VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVF 783
Query: 479 NMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETM 517
+ M+ GI P F+ ++ + K EA ++++ M
Sbjct: 784 DHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM 822
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 110/499 (22%), Positives = 188/499 (37%), Gaps = 82/499 (16%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAVRL 135
PN+ +Y +ID+ AREL ++ P++++YN LI + RG AV +
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 136 FKEAREAGLCLDGFTLSGVIKA-CREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGR 194
+ L + T + +IK C+ +V M V N +L R
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYCKSNVHKAM---------------GVLNKMLER---- 456
Query: 195 GLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGK--EALVLFGEMVRMGMKIDMFTM 252
+ D +++N++I GQCR G A L M G+ D +T
Sbjct: 457 --------------KVLPDVVTYNSLID--GQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 500
Query: 253 ASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCM--KVFE 310
S++ + + + + + G N N + + LID Y K M K+
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 560
Query: 311 EISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPS 370
+ P+ + +N +I G L E L+ + M + G +P + S T L
Sbjct: 561 KNCLPNSLTFNALIHGLCADGKLKEATLL-EEKMVKIGLQP---TVSTDTILIHRLLKD- 615
Query: 371 LGKQVHALAIKSDIPSNRVSVN----NALVAMYSKCGNLHDARRVFDTMPEH----NTVS 422
G HA + + S+ + + Y + G L DA + M E+ + +
Sbjct: 616 -GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFT 674
Query: 423 LNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSAC------AHTGKVEEGQK 476
+S+I GY G + + + M P+ TF+S++ G E
Sbjct: 675 YSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCA 734
Query: 477 YFNMMK--------EKF---GIEPEAKHFSCMVDLLGRAGKLEEAERIIETMP----FDP 521
NMM+ EK + P AK + ++ + G L AE++ + M P
Sbjct: 735 MSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISP 794
Query: 522 GSIEWAALLGAC---RKHG 537
+ + ALL C +KH
Sbjct: 795 SELVFNALLSCCCKLKKHN 813
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 114/539 (21%), Positives = 232/539 (43%), Gaps = 50/539 (9%)
Query: 39 HALYIKTFIPHSTYLSNHFT-------LLYSKCGTLDNARTSFRLTN--NPNVFSYNAII 89
AL + + S+ L + FT L+ S CG L ++ ++ P+ S+N+++
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVV 63
Query: 90 DACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAG-- 143
K + A ++ +PR PD++SYN+LI H G+ A + + R +
Sbjct: 64 SFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGF 123
Query: 144 LC----------LDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGG 193
+C +GF+ ++ +G++++ C + YS + + +
Sbjct: 124 ICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTW-------IDTFCK 175
Query: 194 RGLLSEAWRVFHEMGEGCRDEISWNAMIVAC---GQCREG--KEALVLFGEMVRMGMKID 248
G L A + FH M RD +S N + C G C+ G + A+ L+ EM R+ M ++
Sbjct: 176 SGELQLALKSFHSMK---RDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLN 232
Query: 249 MFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSK--CAPRGMLDCM 306
+ T +++ F ++ + + RM++ N V + +ID + + + M
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA 292
Query: 307 KVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNL 366
K+ + D+ + +ISG + L E I +DM+++ PD F+ + +A
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIV-EDMEKSDLVPDMVIFTTMMNAYFKS 351
Query: 367 SSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSM 426
++ I+ + V+++ + + +K G LH+A V+ + + N V +
Sbjct: 352 GRMKAAVNMYHKLIERGFEPDVVALSTMIDGI-AKNGQLHEA-IVYFCIEKANDVMYTVL 409
Query: 427 ITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFG 486
I + G E +LF + + +VP+ + S ++ G + + K M ++ G
Sbjct: 410 IDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQE-G 468
Query: 487 IEPEAKHFSCMVDLLGRAGKLEEAERIIETM---PFDPGSIEWAALLGACRKHGNVELA 542
+ + ++ ++ L G + EA ++ + M P S + L+ A K GN+ A
Sbjct: 469 LLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAA 527
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 153/307 (49%), Gaps = 28/307 (9%)
Query: 307 KVFEEIS----EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSA 362
+VFE + +PD+V +NTMI G+ + ++ A+ +DM+ G D ++ + A
Sbjct: 243 RVFEVMESGRIKPDIVTYNTMIKGYCKAGQ-TQKAMEKLRDMETRGHEADKITYMTMIQA 301
Query: 363 C---SNLSS-PSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTM--- 415
C S+ S +L +++ I+ +P + S+ ++ K G L++ VF+ M
Sbjct: 302 CYADSDFGSCVALYQEMDEKGIQ--VPPHAFSL---VIGGLCKEGKLNEGYTVFENMIRK 356
Query: 416 -PEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEG 474
+ N +I GYA+ G ++++L M+ E P+ +T+ V++ G+VEE
Sbjct: 357 GSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 416
Query: 475 QKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFDPG----SIEWAALL 530
YF+ + G+ + +S ++D LG+AG+++EAER+ E M + G S + AL+
Sbjct: 417 LDYFHTCRFD-GLAINSMFYSSLIDGLGKAGRVDEAERLFEEMS-EKGCTRDSYCYNALI 474
Query: 531 GACRKHGNVELAVKAANKFLQLEPHNAVPY---VMLSNMYASAGRWEESATVKRLMRERG 587
A KH V+ A+ + + E + Y ++LS M+ R EE+ + +M ++G
Sbjct: 475 DAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEH-RNEEALKLWDMMIDKG 533
Query: 588 VKKKPGC 594
+ C
Sbjct: 534 ITPTAAC 540
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 175/408 (42%), Gaps = 75/408 (18%)
Query: 196 LLSEAWRVFHEMGEG--CRDEISWNAMIVACGQCREGK--EALVLFGEMVRMGMKIDMFT 251
+ A RVF M G D +++N MI G C+ G+ +A+ +M G + D T
Sbjct: 237 FVDSAERVFEVMESGRIKPDIVTYNTMIK--GYCKAGQTQKAMEKLRDMETRGHEADKIT 294
Query: 252 MASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEE 311
+++ A D + + M + G PH S +I C + + VFE
Sbjct: 295 YMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIG--GLCKEGKLNEGYTVFEN 352
Query: 312 I----SEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSA-CSNL 366
+ S+P++ ++ +I G+++ + EDA+ M GF+PD ++S V + C N
Sbjct: 353 MIRKGSKPNVAIYTVLIDGYAKSGSV-EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN- 410
Query: 367 SSPSLGKQVHALAIKSDIPSNRVSVNN----ALVAMYSKCGNLHDARRVFDTMPE----H 418
G+ AL + +++N+ +L+ K G + +A R+F+ M E
Sbjct: 411 -----GRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTR 465
Query: 419 NTVSLNSMITGYAQHGV--------------EG----------------------ESLQL 442
++ N++I + +H EG E+L+L
Sbjct: 466 DSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKL 525
Query: 443 FELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSC--MVDL 500
+++M+ + I P F ++ + +GKV K + + G+ +A +C M++
Sbjct: 526 WDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELA-PMGVILDA---ACEDMINT 581
Query: 501 LGRAGKLEE----AERIIETMPFDPGSIEWAALLGACRKHGNVELAVK 544
L +AG+++E A+ I E PG I ++ A RK G +LA+K
Sbjct: 582 LCKAGRIKEACKLADGITERGREVPGRIR-TVMINALRKVGKADLAMK 628
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 137/334 (41%), Gaps = 48/334 (14%)
Query: 43 IKTF-IPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNN----PNVFSYNAIIDACVKHSH 97
IK F P + +N + K G ++ +R P +++YN +++ V
Sbjct: 178 IKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMF 237
Query: 98 LHLARELFDEIP----RPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSG 153
+ A +F+ + +PDIV+YNT+I + G+ A+ ++ G D T
Sbjct: 238 VDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMT 297
Query: 154 VIKACREDV---------------GLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLS 198
+I+AC D G+ + H F+++ G C G L+
Sbjct: 298 MIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLC-------------KEGKLN 344
Query: 199 EAWRVFHEM-GEGCRDEIS-WNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVL 256
E + VF M +G + ++ + +I + ++A+ L M+ G K D+ T + V+
Sbjct: 345 EGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVV 404
Query: 257 TAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLD-CMKVFEEISEP 315
+ + + G N S LID K G +D ++FEE+SE
Sbjct: 405 NGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKA---GRVDEAERLFEEMSEK 461
Query: 316 ----DLVLWNTMISGFSQHEDLSEDALICFQDMQ 345
D +N +I F++H + E A+ F+ M+
Sbjct: 462 GCTRDSYCYNALIDAFTKHRKVDE-AIALFKRME 494
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 125/293 (42%), Gaps = 21/293 (7%)
Query: 321 NTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCV----TSACSNLSSPSLGKQVH 376
N +I F + + E+ L ++ M+ G P +++ + SA S+ + + +
Sbjct: 191 NALIKSFGKL-GMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVME 249
Query: 377 ALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP----EHNTVSLNSMITGYAQ 432
+ IK DI + N ++ Y K G A M E + ++ +MI
Sbjct: 250 SGRIKPDIVTY-----NTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYA 304
Query: 433 HGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAK 492
G + L++ M ++ I F V+ GK+ EG F M K G +P
Sbjct: 305 DSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRK-GSKPNVA 363
Query: 493 HFSCMVDLLGRAGKLEEAERIIETM---PFDPGSIEWAALLGACRKHGNVELAVKAAN-- 547
++ ++D ++G +E+A R++ M F P + ++ ++ K+G VE A+ +
Sbjct: 364 IYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTC 423
Query: 548 KFLQLEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERGVKKKPGCSWIQID 600
+F L N++ Y L + AGR +E+ + M E+G + C ID
Sbjct: 424 RFDGL-AINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALID 475
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 211/470 (44%), Gaps = 43/470 (9%)
Query: 106 DEIPR-PDIVS-YNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKAC----- 158
D PR P + S +NTLI + G A LF E ++G+ +D T + +I C
Sbjct: 296 DSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGH 355
Query: 159 -REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEG--CRDEI 215
E L+ ++ + Y N +L+ + G + A + ++ + D +
Sbjct: 356 LSEAESLLKKMEEKGISPDTKTY----NILLSLHADAGDIEAALEYYRKIRKVGLFPDTV 411
Query: 216 SWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRM 275
+ A++ Q + E + EM R ++ID ++ ++ + + G+ +
Sbjct: 412 THRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMY-----VNEGLVVQAKA 466
Query: 276 IKSGFNWNPHVGS----GLIDMYSKCAPRGM-LDCMKVFE-----EISEPDLVLWNTMIS 325
+ F + + S +ID+Y A +G+ ++ VF D++ +N MI
Sbjct: 467 LFERFQLDCVLSSTTLAAVIDVY---AEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIK 523
Query: 326 GFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIP 385
+ + + L E AL F+ M+ G PD+C+++ + + + +++ A + S
Sbjct: 524 AYGKAK-LHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCK 582
Query: 386 SNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH----NTVSLNSMITGYAQHGVEGESLQ 441
A++A Y + G L DA +++ M + N V S+I G+A+ G+ E++Q
Sbjct: 583 PG-CKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQ 641
Query: 442 LFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLL 501
F +M + + N+I S++ A + G +EE ++ ++ MK+ G P+ + M+ L
Sbjct: 642 YFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEG-GPDVAASNSMLSLC 700
Query: 502 GRAGKLEEAERIIETMPFDPGS---IEWAALLGACRKHGNVELAVKAANK 548
G + EAE I + + G+ I +A ++ + G ++ A++ A +
Sbjct: 701 ADLGIVSEAESIFNALR-EKGTCDVISFATMMYLYKGMGMLDEAIEVAEE 749
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/456 (22%), Positives = 193/456 (42%), Gaps = 25/456 (5%)
Query: 81 NVFSYNAIIDACVKHSHLH--LARELFDEIPRP----DIVSYNTLIAAHAHRGEHGPAVR 134
+ +Y+ +I + + + + + L+ EI R D+ N +I A G+ A++
Sbjct: 231 DFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQ 290
Query: 135 LFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHC-FAVL--CGYSCYASVCNAVLARY 191
L A+ GL TL +I A D G ++ F L G NA+L Y
Sbjct: 291 LLGMAQATGLSAKTATLVSIISAL-ADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGY 349
Query: 192 GGRGLLSEAWRVFHEMGEG--CRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDM 249
G L +A + EM + DE +++ +I A + A ++ EM ++ +
Sbjct: 350 VKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNS 409
Query: 250 FTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSK--CAPRGMLDCMK 307
F + +L F + Q M G + + +ID + K C M +
Sbjct: 410 FVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDR 469
Query: 308 VFEEISEPDLVLWNTMISGFSQH--EDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSN 365
+ E EPD V WNT+I +H ++E+ F+ M+R G P +++ + ++ +
Sbjct: 470 MLSEGIEPDRVTWNTLIDCHCKHGRHIVAEE---MFEAMERRGCLPCATTYNIMINSYGD 526
Query: 366 LSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMP----EHNTV 421
K++ I N V+ + LV +Y K G +DA + M + ++
Sbjct: 527 QERWDDMKRLLGKMKSQGILPNVVT-HTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSST 585
Query: 422 SLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMM 481
N++I YAQ G+ +++ F +M + + P+ + S+++A + E M
Sbjct: 586 MYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYM 645
Query: 482 KEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETM 517
KE G++P+ ++ ++ L R K ++ + E M
Sbjct: 646 KEN-GVKPDVVTYTTLMKALIRVDKFQKVPVVYEEM 680
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 163/397 (41%), Gaps = 72/397 (18%)
Query: 215 ISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGR 274
+++NA+I AC + + ++AL L +M + G + D + V+ + T + M
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVM----- 252
Query: 275 MIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEIS----EPDLVLWNTMISGFSQH 330
+++++EI E D+ L N +I GF++
Sbjct: 253 ------------------------------LLRLYKEIERDKLELDVQLVNDIIMGFAKS 282
Query: 331 EDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSN----LSSPSLGKQVHALAIKSDIPS 386
D S+ AL Q G + + SA ++ L + +L +++ IK
Sbjct: 283 GDPSK-ALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKP---- 337
Query: 387 NRVSVNNALVAMYSKCGNLHDARRVFDTM------PEHNTVSLNSMITGYAQHGVEGESL 440
R NAL+ Y K G L DA + M P+ +T SL +I Y G +
Sbjct: 338 -RTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSL--LIDAYVNAGRWESAR 394
Query: 441 QLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKE--KFGIEPEAKHFSCMV 498
+ + M D+ PN+ F +L+ G E QK F ++KE G++P+ + ++ ++
Sbjct: 395 IVLKEMEAGDVQPNSFVFSRLLAGFRDRG---EWQKTFQVLKEMKSIGVKPDRQFYNVVI 451
Query: 499 DLLGRAGKLEEAERIIETM---PFDPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPH 555
D G+ L+ A + M +P + W L+ KHG + A F +E
Sbjct: 452 DTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR---HIVAEEMFEAMERR 508
Query: 556 NAVP----YVMLSNMYASAGRWEESATVKRLMRERGV 588
+P Y ++ N Y RW++ + M+ +G+
Sbjct: 509 GCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGI 545
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 182/423 (43%), Gaps = 39/423 (9%)
Query: 234 LVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDM 293
L L+ E+ R +++D+ + ++ F D + +Q G +G + + L+ +
Sbjct: 254 LRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAK---TATLVSI 310
Query: 294 YSKCAPRG-MLDCMKVFEEISE----PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAG 348
S A G L+ +FEE+ + P +N ++ G+ + L +DA +M++ G
Sbjct: 311 ISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPL-KDAESMVSEMEKRG 369
Query: 349 FRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDA 408
PD+ ++S + A N + V D+ N V + L+A + G +
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSF-VFSRLLAGFRDRG---EW 425
Query: 409 RRVFDTMPEHNTVSL-------NSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISV 461
++ F + E ++ + N +I + + ++ F+ M+ E I P+ +T+ ++
Sbjct: 426 QKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTL 485
Query: 462 LSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFD- 520
+ G+ ++ F M E+ G P A ++ M++ G + ++ +R++ M
Sbjct: 486 IDCHCKHGRHIVAEEMFEAM-ERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQG 544
Query: 521 --PGSIEWAALLGACRKHGNVELAVKAAN--KFLQLEPHNAVPYVMLSNMYASAGRWEES 576
P + L+ K G A++ K + L+P + + Y L N YA G E++
Sbjct: 545 ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTM-YNALINAYAQRGLSEQA 603
Query: 577 ATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRKMKQAGYV 636
R+M G+K S + +++ ++ F ED + +Y MK+ G
Sbjct: 604 VNAFRVMTSDGLKP----SLLALNSLINAF-GEDRRDAEAFAVLQY-------MKENGVK 651
Query: 637 PDI 639
PD+
Sbjct: 652 PDV 654
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 104/231 (45%), Gaps = 12/231 (5%)
Query: 61 YSKCGTLDNARTSF-RLTNN---PNVFSYNAIIDACVKHSHLHLARELFDEIPR----PD 112
+ K LD+A T+F R+ + P+ ++N +ID KH +A E+F+ + R P
Sbjct: 454 FGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPC 513
Query: 113 IVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFA 172
+YN +I ++ + RL + + G+ + T + ++ + + C
Sbjct: 514 ATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLE 573
Query: 173 VL--CGYSCYASVCNAVLARYGGRGLLSEAWRVFHEM-GEGCRDE-ISWNAMIVACGQCR 228
+ G +++ NA++ Y RGL +A F M +G + ++ N++I A G+ R
Sbjct: 574 EMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDR 633
Query: 229 EGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSG 279
EA + M G+K D+ T +++ A ++ + MI SG
Sbjct: 634 RDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSG 684
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 123/275 (44%), Gaps = 38/275 (13%)
Query: 320 WNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALA 379
+N +I +++ D+ E AL M++ G++ D ++S V +L+ + V L
Sbjct: 200 YNALIGACARNNDI-EKALNLIAKMRQDGYQSDFVNYSLV---IQSLTRSNKIDSVMLLR 255
Query: 380 IKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEHNTVSLNSMITGYAQHGVEGES 439
+ +I +++ ++ LV N +I G+A+ G ++
Sbjct: 256 LYKEIERDKLELDVQLV---------------------------NDIIMGFAKSGDPSKA 288
Query: 440 LQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVD 499
LQL + + T +S++SA A +G+ E + F +++ GI+P + ++ ++
Sbjct: 289 LQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQS-GIKPRTRAYNALLK 347
Query: 500 LLGRAGKLEEAERIIETMP---FDPGSIEWAALLGACRKHGNVELA--VKAANKFLQLEP 554
+ G L++AE ++ M P ++ L+ A G E A V + ++P
Sbjct: 348 GYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQP 407
Query: 555 HNAVPYVMLSNMYASAGRWEESATVKRLMRERGVK 589
++ V +L+ + G W+++ V + M+ GVK
Sbjct: 408 NSFVFSRLLAG-FRDRGEWQKTFQVLKEMKSIGVK 441
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 183/431 (42%), Gaps = 84/431 (19%)
Query: 203 VFHEMGEGC---RDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAF 259
+FH M E C D S+N +I +C AL + G+M++ G + D+ T++S++ F
Sbjct: 91 LFHHM-EVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGF 149
Query: 260 TCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVL 319
G F ID+ SK G PD+V+
Sbjct: 150 C-----QGNRVFDA-----------------IDLVSKMEEMGF-----------RPDVVI 176
Query: 320 WNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSF-SCVTSACSNLSSPSLGKQVHAL 378
+NT+I G S L DA+ F M+R G R D ++ S V C + + + +
Sbjct: 177 YNTIIDG-SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 379 AIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH----NTVSLNSMITGYAQHG 434
++ +P+ V A++ ++ K G +A ++++ M + + NS+I G HG
Sbjct: 236 VMRDIVPN--VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 435 VEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHF 494
E+ Q+ +LM+ + +P+ +T+ ++++ + +V+EG K F M ++ G+ + +
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR-GLVGDTITY 352
Query: 495 SCMVDLLGRAGKLEEAERIIETMPFDPGSIEWAALL-GAC--------------RKHGNV 539
+ ++ +AG+ + A+ I M P ++ LL G C + +
Sbjct: 353 NTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 412
Query: 540 ELAVKAANKFLQ----------------------LEPHNAVPYVMLSNMYASAGRWEESA 577
EL + N + L+P + V Y + + + +W++S
Sbjct: 413 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP-DVVSYTTMISGFCRKRQWDKSD 471
Query: 578 TVKRLMRERGV 588
+ R M+E G+
Sbjct: 472 LLYRKMQEDGL 482
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/446 (20%), Positives = 188/446 (42%), Gaps = 28/446 (6%)
Query: 94 KHSHLHLARE------LFDEIPRPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLD 147
K S ++L E + P P IV ++ +++ A + + LF G+ D
Sbjct: 44 KRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHD 103
Query: 148 GFTLSGVIKACREDVGLVMQLHCFAVLC--GYSCYASVCNAVLARYGGRGLLSEAWRVFH 205
++ + VI V+ L + GY ++++ + + +A +
Sbjct: 104 LYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVS 163
Query: 206 EMGE-GCR-DEISWNAMIVACGQCREG--KEALVLFGEMVRMGMKIDMFTMASVLTAFTC 261
+M E G R D + +N +I G C+ G +A+ LF M R G++ D T S++ C
Sbjct: 164 KMEEMGFRPDVVIYNTIID--GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCC 221
Query: 262 LEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEIS----EPDL 317
+ + M+ N + +ID++ K + MK++EE++ +PD+
Sbjct: 222 SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFS--EAMKLYEEMTRRCVDPDV 279
Query: 318 VLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHA 377
+N++I+G H + E A M G PD +++ + + G ++
Sbjct: 280 FTYNSLINGLCMHGRVDE-AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFR 338
Query: 378 LAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVF---DTMPEHNTVSLNSMITGYAQHG 434
+ + + ++ N ++ Y + G A+ +F D+ P T S+ ++ G +
Sbjct: 339 EMAQRGLVGDTITYN-TIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSI--LLYGLCMNW 395
Query: 435 VEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHF 494
++L LFE M + +I + T+ V+ G VE+ F + K G++P+ +
Sbjct: 396 RVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCK-GLKPDVVSY 454
Query: 495 SCMVDLLGRAGKLEEAERIIETMPFD 520
+ M+ R + ++++ + M D
Sbjct: 455 TTMISGFCRKRQWDKSDLLYRKMQED 480
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 93/465 (20%), Positives = 187/465 (40%), Gaps = 96/465 (20%)
Query: 39 HALYIKTFIPHSTYLSNHFTLLYSKCGTLDNARTSFRLTNNPNVFSYNAIIDACVKHSHL 98
H LY + + + F + S G + + P+V + +++I+ + + +
Sbjct: 102 HDLYSYNIVINCLCRCSRFVIALSVVGKM------MKFGYEPDVVTVSSLINGFCQGNRV 155
Query: 99 HLARELFDEIP----RPDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGV 154
A +L ++ RPD+V YNT+I G AV LF G+ D T + +
Sbjct: 156 FDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSL 215
Query: 155 IKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHE--MGEGCR 212
+ A +C + G S+A R+ + M +
Sbjct: 216 V-------------------------AGLCCS--------GRWSDAARLMRDMVMRDIVP 242
Query: 213 DEISWNAMIVACGQCREGK--EALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQ 270
+ I++ A+I +EGK EA+ L+ EM R + D+FT S L G+
Sbjct: 243 NVITFTAVIDVF--VKEGKFSEAMKLYEEMTRRCVDPDVFTYNS----------LINGLC 290
Query: 271 FHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQH 330
HGR+ ++ + MLD M + PD+V +NT+I+GF +
Sbjct: 291 MHGRVDEA---------------------KQMLDLM--VTKGCLPDVVTYNTLINGFCKS 327
Query: 331 EDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVS 390
+ + E + F++M + G D +++ + P +++ + +R +
Sbjct: 328 KRVDEGTKL-FREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM------DSRPN 380
Query: 391 VNNALVAMYSKCGN--LHDARRVFDTMP----EHNTVSLNSMITGYAQHGVEGESLQLFE 444
+ + +Y C N + A +F+ M E + + N +I G + G ++ LF
Sbjct: 381 IRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFR 440
Query: 445 LMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEP 489
+ + + P+ +++ +++S + ++ + M+E G+ P
Sbjct: 441 SLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED-GLLP 484
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 122/541 (22%), Positives = 227/541 (41%), Gaps = 47/541 (8%)
Query: 79 NPNVFSYNAIIDACVKHSHLHLARELFDEIP----RPDIVSYNTLIAAHAHRGEHGPAVR 134
+PN+F YNA+ID+ K H A LFD + RP+ V+Y+ LI RG+ A+
Sbjct: 364 SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALS 423
Query: 135 LFKEAREAGLCLDGFTLSGVIKA-CR-EDVGLVMQLHCFAVLCGYSCYASVCNAVLARYG 192
E + GL L + + +I C+ D+ + +++ Y
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483
Query: 193 GRGLLSEAWRVFHEM-GEGCRDEISWNAMIVACGQCREG--KEALVLFGEMVRMGMKIDM 249
+G +++A R++HEM G+G I + + G R G ++A+ LF EM +K +
Sbjct: 484 SKGKINKALRLYHEMTGKGIAPSI-YTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542
Query: 250 FTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVF 309
T ++ + D++ +F M + G + + LI + C G KVF
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI--HGLCLT-GQASEAKVF 599
Query: 310 EE-----ISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACS 364
+ E + + + ++ GF + L E +C Q+M + G D + +
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC-QEMVQRGVDLDLVCYGVLIDGSL 658
Query: 365 NLSSPSLG----KQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH-- 418
L K++H +K D + +++ SK G+ +A ++D M
Sbjct: 659 KHKDRKLFFGLLKEMHDRGLKPDD-----VIYTSMIDAKSKTGDFKEAFGIWDLMINEGC 713
Query: 419 --NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNIT---FISVLSACAHTGKVEE 473
N V+ ++I G + G E+ L M VPN +T F+ +L+ G+V+
Sbjct: 714 VPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK----GEVDM 769
Query: 474 GQKYFNMMKEKF-GIEPEAKHFSCMVDLLGRAGKLEEAERIIETMPFD---PGSIEWAAL 529
QK + G+ ++ ++ R G++EEA +I M D P I + +
Sbjct: 770 -QKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTM 828
Query: 530 LGACRKHGNVELAVKAANKFLQ--LEPHNAVPYVMLSNMYASAGRWEESATVKRLMRERG 587
+ + +V+ A++ N + + P + V Y L + AG ++ ++ M +G
Sbjct: 829 INELCRRNDVKKAIELWNSMTEKGIRP-DRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 887
Query: 588 V 588
+
Sbjct: 888 L 888
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 113/549 (20%), Positives = 222/549 (40%), Gaps = 78/549 (14%)
Query: 111 PDIVSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHC 170
P++ + + L+ G A+ LF + G+ D + +GVI+
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIR-------------- 235
Query: 171 FAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEGCR-DEISWNAMIVACGQCRE 229
S+C + L + H GC + + +N +I G C++
Sbjct: 236 -----------SLCEL-------KDLSRAKEMIAHMEATGCDVNIVPYNVLID--GLCKK 275
Query: 230 GK--EALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVG 287
K EA+ + ++ +K D+ T +++ +++ G++ M+ F+ +
Sbjct: 276 QKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAV 335
Query: 288 SGLIDMYSKCAPRGMLD-----CMKVFEEISEPDLVLWNTMISGFSQHEDLSEDALICFQ 342
S L++ K RG ++ +V + P+L ++N +I + E L+ F
Sbjct: 336 SSLVEGLRK---RGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL-FD 391
Query: 343 DMQRAGFRPDDCSFSCVTSA-CSNLSSPSLGKQVHALAIKSDIPSNRVSVN----NALVA 397
M + G RP+D ++S + C GK AL+ ++ + ++ N+L+
Sbjct: 392 RMGKIGLRPNDVTYSILIDMFCRR------GKLDTALSFLGEMVDTGLKLSVYPYNSLIN 445
Query: 398 MYSKCGNLHDAR----RVFDTMPEHNTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVP 453
+ K G++ A + + E V+ S++ GY G ++L+L+ M + I P
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAP 505
Query: 454 NNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERI 513
+ TF ++LS G + + K FN M E + ++P ++ M++ G + +A
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAE-WNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 514 IETMP---FDPGSIEWAALL-GACRKHGNVELAVKAANKFLQLEPHNAVPYVMLSNMYAS 569
++ M P + + L+ G C E V N + Y L + +
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 570 AGRWEESATVKRLMRERGVKKKPGCSWIQIDNKVHVFVAEDSSHPMIKEIHEYMGEMLRK 629
G+ EE+ +V + M +RGV C + ID + H K+ + G +L++
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSL--------KH---KDRKLFFG-LLKE 672
Query: 630 MKQAGYVPD 638
M G PD
Sbjct: 673 MHDRGLKPD 681
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 176/376 (46%), Gaps = 21/376 (5%)
Query: 213 DEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFH 272
D ++ N+++ +A+ L +MV MG K D T +++ + +
Sbjct: 147 DIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALI 206
Query: 273 GRMIKSGFNWNPHVGSGLIDMYSKCAPRGM-LDCMKVFEEIS-EPDLVLWNTMISGFSQ- 329
RM++ G + +++ K + L+ + E E ++V+++T+I +
Sbjct: 207 DRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKY 266
Query: 330 -HEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNR 388
HED DAL F +M+ G RP+ ++S + S N S ++ + I+ I N
Sbjct: 267 RHED---DALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323
Query: 389 VSVNNALVAMYSKCGNLHDARRVFDTMPEH----NTVSLNSMITGYAQHGVEGESLQLFE 444
V+ + AL+ + K G L A ++++ M + N + +S+I G+ GE+ Q+ E
Sbjct: 324 VTFS-ALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382
Query: 445 LMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRA 504
LM+++D +PN +T+ ++++ +V++G + F M ++ G+ ++ ++ +A
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQR-GLVGNTVTYTTLIHGFFQA 441
Query: 505 GKLEEAERIIETMP---FDPGSIEWAALLGACRKHGNVELAVKAANKFLQ---LEPHNAV 558
+ A+ + + M P + + LL K+G + A+ ++LQ +EP
Sbjct: 442 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM-VVFEYLQRSTMEPDIYT 500
Query: 559 PYVMLSNMYASAGRWE 574
+M+ M AG+W+
Sbjct: 501 YNIMIEGM-CKAGKWK 515
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 183/419 (43%), Gaps = 30/419 (7%)
Query: 81 NVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAVRLF 136
N+++YN +I+ + S L LA L ++ + PDIV+ N+L+ H AV L
Sbjct: 112 NLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALV 171
Query: 137 KEAREAGLCLDGFTLSGVI------KACREDVGLVMQLHCFAVLCGYSCYASVCNAVLAR 190
+ E G D T + +I E V L+ ++ Y +V N + R
Sbjct: 172 DQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKR 231
Query: 191 YGGRGLLSEAWRVFHEMGEGCRDE---ISWNAMIVACGQCREGKEALVLFGEMVRMGMKI 247
G A + ++M E + E + ++ +I + + R +AL LF EM G++
Sbjct: 232 ----GDTDLALNLLNKM-EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 286
Query: 248 DMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMK 307
++ T +S+++ + + MI+ N N S LID + K ++ K
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGK--LVKAEK 344
Query: 308 VFEEIS----EPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSAC 363
++EE+ +P++ ++++I+GF + L E A + M R P+ +++ + +
Sbjct: 345 LYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE-AKQMLELMIRKDCLPNVVTYNTLINGF 403
Query: 364 SNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPE----HN 419
G ++ + + N V+ L+ + + + +A+ VF M N
Sbjct: 404 CKAKRVDKGMELFREMSQRGLVGNTVTYT-TLIHGFFQARDCDNAQMVFKQMVSVGVHPN 462
Query: 420 TVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYF 478
++ N ++ G ++G +++ +FE + + + P+ T+ ++ GK + G YF
Sbjct: 463 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 182/436 (41%), Gaps = 85/436 (19%)
Query: 80 PNVFSYNAIIDACVKHS-HLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAVR 134
PN+ +YNA+IDAC K + FDE+ R PD +++N+L+A + G A
Sbjct: 301 PNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARN 360
Query: 135 LFKEAREAGLCLDGFT----LSGVIKACREDVG--LVMQLHCFAVLCGYSCYASVCNAVL 188
LF E + D F+ L + K + D+ ++ Q+ ++ Y++V +
Sbjct: 361 LFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG-- 418
Query: 189 ARYGGRGLLSEAWRVFHEMGEG--CRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMK 246
+ G EA +F EM D +S+N ++ + +EAL + EM +G+K
Sbjct: 419 --FAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 247 IDMFTMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCM 306
D+ T ++L GG G+ +
Sbjct: 477 KDVVTYNALL----------GGYGKQGKYD---------------------------EVK 499
Query: 307 KVFEEISE----PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSA 362
KVF E+ P+L+ ++T+I G+S+ L ++A+ F++ + AG R D +S + A
Sbjct: 500 KVFTEMKREHVLPNLLTYSTLIDGYSKG-GLYKEAMEIFREFKSAGLRADVVLYSALIDA 558
Query: 363 -CSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAM-----------YSKCGNLHDARR 410
C N S + + K I N V+ N+ + A YS G+L +
Sbjct: 559 LCKNGLVGSAVSLIDEMT-KEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSS 617
Query: 411 VFDTMPEHN-----------TVSLNSMITGYAQHGVEGES--LQLFELMMQEDIVPNNIT 457
+ E T N+ T + G++ S L++F M Q +I PN +T
Sbjct: 618 ALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVT 677
Query: 458 FISVLSACAHTGKVEE 473
F ++L+AC+ E+
Sbjct: 678 FSAILNACSRCNSFED 693
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 178/409 (43%), Gaps = 72/409 (17%)
Query: 162 VGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGE-GCRDE-ISWNA 219
V + ++ A GY +A+++ YG GL EA VF+ M E G R +++NA
Sbjct: 249 VTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNA 308
Query: 220 MIVACGQC-REGKEALVLFGEMVRMGMKIDMFTMASVLTA------FTCLEDLAGGMQFH 272
+I ACG+ E K+ F EM R G++ D T S+L + +L M +
Sbjct: 309 VIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMT-N 367
Query: 273 GRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISE-------PDLVLWNTMIS 325
R+ + F++N L+D K G +D FE +++ P++V ++T+I
Sbjct: 368 RRIEQDVFSYNT-----LLDAICKG---GQMDL--AFEILAQMPVKRIMPNVVSYSTVID 417
Query: 326 GFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIP 385
GF++ E AL F +M+ G D S+
Sbjct: 418 GFAKAGRFDE-ALNLFGEMRYLGIALDRVSY----------------------------- 447
Query: 386 SNRVSVNNALVAMYSKCGNLHDARRVFDTMP----EHNTVSLNSMITGYAQHGVEGESLQ 441
N L+++Y+K G +A + M + + V+ N+++ GY + G E +
Sbjct: 448 -------NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKK 500
Query: 442 LFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLL 501
+F M +E ++PN +T+ +++ + G +E + F K G+ + +S ++D L
Sbjct: 501 VFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSA-GLRADVVLYSALIDAL 559
Query: 502 GRAGKLEEAERIIETMP---FDPGSIEWAALLGACRKHGNVELAVKAAN 547
+ G + A +I+ M P + + +++ A + ++ + +N
Sbjct: 560 CKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSN 608
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 150/347 (43%), Gaps = 46/347 (13%)
Query: 62 SKCGTLDNARTSF-RLTNN---PNVFSYNAIIDACVKHSHLHLARELFDEIP----RPDI 113
S+ G + AR F +TN +VFSYN ++DA K + LA E+ ++P P++
Sbjct: 350 SRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNV 409
Query: 114 VSYNTLIAAHAHRGEHGPAVRLFKEAREAGLCLDGFT----LSGVIKACREDVGLVMQLH 169
VSY+T+I A G A+ LF E R G+ LD + LS K R + L +
Sbjct: 410 VSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILRE 469
Query: 170 CFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVFHEMGEG--CRDEISWNAMIVACGQC 227
+V G NA+L YG +G E +VF EM + ++++ +I +
Sbjct: 470 MASV--GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKG 527
Query: 228 REGKEALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAG-GMQFHGRMIKSGFNWNPHV 286
KEA+ +F E G++ D+ ++++ A C L G + M K G + N
Sbjct: 528 GLYKEAMEIFREFKSAGLRADVVLYSALIDAL-CKNGLVGSAVSLIDEMTKEGISPNVVT 586
Query: 287 GSGLIDMYSKCAPR---------GMLD-CMKVFEEISEPDLVLWNTMISGFSQ------- 329
+ +ID + + A G L ++E + N +I F Q
Sbjct: 587 YNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETE---GNRVIQLFGQLTTESNN 643
Query: 330 ------HEDLSEDALI--CFQDMQRAGFRPDDCSFSCVTSACSNLSS 368
E + E + I F+ M + +P+ +FS + +ACS +S
Sbjct: 644 RTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNS 690
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 107/213 (50%), Gaps = 10/213 (4%)
Query: 387 NRVSVNNALVAMYSKCGNLHDARRVFDTMPEH----NTVSLNSMITGYAQHGVEGESL-Q 441
N V +AL++ Y + G +A VF++M E+ N V+ N++I + G+E + + +
Sbjct: 266 NTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAK 325
Query: 442 LFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLL 501
F+ M + + P+ ITF S+L+ C+ G E + F+ M + IE + ++ ++D +
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNR-RIEQDVFSYNTLLDAI 384
Query: 502 GRAGKLEEAERIIETMPFD---PGSIEWAALLGACRKHGNVELAVKAANKFLQLE-PHNA 557
+ G+++ A I+ MP P + ++ ++ K G + A+ + L +
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 558 VPYVMLSNMYASAGRWEESATVKRLMRERGVKK 590
V Y L ++Y GR EE+ + R M G+KK
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 126/248 (50%), Gaps = 15/248 (6%)
Query: 352 DDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSN-RVSVNNALVAMYSKCGNLHDARR 410
DDC++ N ++G + A+K + N + + +A+++ + G + A+R
Sbjct: 197 DDCTYIIRELGNRNECDKAVG--FYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKR 254
Query: 411 VFDTM---PEHNTV-SLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACA 466
+F+T NTV + +++I+ Y + G+ E++ +F M + + PN +T+ +V+ AC
Sbjct: 255 IFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACG 314
Query: 467 HTG-KVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIETMP---FDPG 522
G + ++ K+F+ M ++ G++P+ F+ ++ + R G E A + + M +
Sbjct: 315 KGGMEFKQVAKFFDEM-QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQD 373
Query: 523 SIEWAALLGACRKHGNVELA--VKAANKFLQLEPHNAVPYVMLSNMYASAGRWEESATVK 580
+ LL A K G ++LA + A ++ P N V Y + + +A AGR++E+ +
Sbjct: 374 VFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMP-NVVSYSTVIDGFAKAGRFDEALNLF 432
Query: 581 RLMRERGV 588
MR G+
Sbjct: 433 GEMRYLGI 440
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 116/524 (22%), Positives = 205/524 (39%), Gaps = 94/524 (17%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRG--EHGPAV 133
P+VF YN +ID K ++ A +LFDE+ P +++YNTLI + G E V
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271
Query: 134 R---------------------------------LFKEAREAGLCLDGFTLSGVIK--AC 158
R + KE ++ G D FT S + +
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331
Query: 159 REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEAWRVF-HEMGEG-CRDEIS 216
E + ++ AV G A C+ +L G + +A + EM +G +E+
Sbjct: 332 NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI 391
Query: 217 WNAMIVACGQCREGK--EALVLFGEMVRMGMKIDMFTMASVLTAFTCLEDLAGGMQFHGR 274
+N MI G CR+G A + M + GMK D ++ F L ++ + +
Sbjct: 392 YNTMI--DGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNK 449
Query: 275 MIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEISEPDLVLWNTMISGFSQHEDLS 334
M G + P + +N +I G+ + +
Sbjct: 450 MKLKGVS---------------------------------PSVETYNILIGGYGRKYEFD 476
Query: 335 EDALICF---QDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSV 391
+ CF ++M+ G P+ S+ + + C S L Q+ ++ S +V +
Sbjct: 477 K----CFDILKEMEDNGTMPNVVSYGTLIN-CLCKGSKLLEAQIVKRDMEDRGVSPKVRI 531
Query: 392 NNALVAMYSKCGNLHDARRVFDTM----PEHNTVSLNSMITGYAQHGVEGESLQLFELMM 447
N L+ G + DA R M E N V+ N++I G + G E+ L +
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS 591
Query: 448 QEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKL 507
++ + P+ T+ S++S G V+ + MK + GI+P K + ++ L + G +
Sbjct: 592 RKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK-RSGIKPTLKTYHLLISLCTKEG-I 649
Query: 508 EEAERIIETMPFDPGSIEWAALLGACRKHGNVELAVKAANKFLQ 551
E ER+ M P + + +L HG++E A + ++
Sbjct: 650 ELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIE 693
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/482 (21%), Positives = 191/482 (39%), Gaps = 63/482 (13%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAVRL 135
P+ F Y I A VK S + ELF+ + P + YN LI A +L
Sbjct: 177 PSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQL 236
Query: 136 FKEAREAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRG 195
F E ++ L Y N ++ Y G
Sbjct: 237 FDE--------------------------MLARRLLPSLITY-------NTLIDGYCKAG 263
Query: 196 LLSEAWRVFHEMGEGCRDE--ISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMA 253
++++V M + I++N ++ + ++A + EM +G D FT +
Sbjct: 264 NPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFS 323
Query: 254 SVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVF-EEI 312
+ ++ E + + + SG N + S L++ + C + ++ E+
Sbjct: 324 ILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLN--ALCKEGKIEKAEEILGREM 381
Query: 313 SE---PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSC-VTSACSNLSS 368
++ P+ V++NTMI G+ + DL A + + M++ G +PD +++C + C
Sbjct: 382 AKGLVPNEVIYNTMIDGYCRKGDLV-GARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEM 440
Query: 369 PSLGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH-------NTV 421
+ K+V+ + +K PS V N L+ Y G ++ + FD + E N V
Sbjct: 441 ENAEKEVNKMKLKGVSPS--VETYNILIGGY---GRKYEFDKCFDILKEMEDNGTMPNVV 495
Query: 422 SLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMM 481
S ++I + E+ + M + P + ++ C GK+E+ ++ M
Sbjct: 496 SYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEM 555
Query: 482 KEKFGIEPEAKHFSCMVDLLGRAGKLEEAERI---IETMPFDPGSIEWAALLGACRKHGN 538
+K GIE ++ ++D L GKL EAE + I P + +L+ GN
Sbjct: 556 LKK-GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGN 614
Query: 539 VE 540
V+
Sbjct: 615 VQ 616
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 145/333 (43%), Gaps = 32/333 (9%)
Query: 274 RMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFEEIS----EPDLVLWNTMISGFSQ 329
R++ S +N LID Y C KV E + EP L+ +NT++ G +
Sbjct: 244 RLLPSLITYNT-----LIDGY--CKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFK 296
Query: 330 HEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRV 389
+ EDA ++M+ GF PD +FS + S+ V+ A+ S + N
Sbjct: 297 A-GMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAY 355
Query: 390 SVNNALVAMYSKCGNLHDARRVFD------TMPEHNTVSLNSMITGYAQHGVEGESLQLF 443
+ + L A+ K G + A + +P N V N+MI GY + G +
Sbjct: 356 TCSILLNAL-CKEGKIEKAEEILGREMAKGLVP--NEVIYNTMIDGYCRKGDLVGARMKI 412
Query: 444 ELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGR 503
E M ++ + P+++ + ++ G++E +K N MK K G+ P + ++ ++ GR
Sbjct: 413 EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK-GVSPSVETYNILIGGYGR 471
Query: 504 AGKLEEAERIIETMPFD---PGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPY 560
+ ++ I++ M + P + + L+ C G+ L + + +E P
Sbjct: 472 KYEFDKCFDILKEMEDNGTMPNVVSYGTLIN-CLCKGSKLLEAQIVKR--DMEDRGVSPK 528
Query: 561 VMLSNMYA----SAGRWEESATVKRLMRERGVK 589
V + NM S G+ E++ + M ++G++
Sbjct: 529 VRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 11/210 (5%)
Query: 341 FQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHALAIKSDIPSNRVSVNNALVAMYS 400
F ++ + FRP + A LS G ++ +K D V + N L+
Sbjct: 167 FLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFN-RMKHDRIYPSVFIYNVLIDGLC 225
Query: 401 KCGNLHDARRVFDTMPEH----NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNNI 456
K ++DA ++FD M + ++ N++I GY + G +S ++ E M + I P+ I
Sbjct: 226 KGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLI 285
Query: 457 TFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIET 516
TF ++L G VE+ + MK+ G P+A FS + D K E A + ET
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKD-LGFVPDAFTFSILFDGYSSNEKAEAALGVYET 344
Query: 517 MPFDPG----SIEWAALLGACRKHGNVELA 542
D G + + LL A K G +E A
Sbjct: 345 -AVDSGVKMNAYTCSILLNALCKEGKIEKA 373
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 119/560 (21%), Positives = 212/560 (37%), Gaps = 95/560 (16%)
Query: 85 YNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
YN +I +H+ + AR LF E+ + PD +Y+ LI AH G+ A+ L +
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 141 EAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEA 200
A + T + +I AC G G EA
Sbjct: 206 RAAIAPSRSTYNNLINAC---------------------------------GSSGNWREA 232
Query: 201 WRVFHEMGEG--CRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTA 258
V +M + D ++ N ++ A R+ +AL F M ++ D T ++
Sbjct: 233 LEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYC 292
Query: 259 FTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFE----EISE 314
+ L + + M + P V + M+ + +C VFE E +
Sbjct: 293 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 352
Query: 315 PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQ 374
P++V +N ++ ++ H +S AL D+++ G PD S++C+ ++ P K+
Sbjct: 353 PNIVSYNALMGAYAVH-GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 411
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH---------------- 418
V + K N V+ NAL+ Y G L +A +F M +
Sbjct: 412 VFLMMRKERRKPNVVTY-NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 470
Query: 419 -----------------------NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNN 455
NT + NS I Y +++ L++ M ++ + ++
Sbjct: 471 SRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADS 530
Query: 456 ITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIE 515
+TF ++S K E Y M E I + +S ++ + G++ EAE I
Sbjct: 531 VTFTILISGSCRMSKYPEAISYLKEM-EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFN 589
Query: 516 TMPF---DPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVM----LSNMYA 568
M +P I + ++L A + E KA FL++E + P + L +
Sbjct: 590 QMKMAGCEPDVIAYTSMLHA---YNASEKWGKACELFLEMEANGIEPDSIACSALMRAFN 646
Query: 569 SAGRWEESATVKRLMRERGV 588
G+ + LMRE+ +
Sbjct: 647 KGGQPSNVFVLMDLMREKEI 666
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/447 (19%), Positives = 176/447 (39%), Gaps = 60/447 (13%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELF----DEIPRPDIVSYNTLIAAHAHRGEHGPAVRL 135
P+V SY ++++ + A+E+F E +P++V+YN LI A+ G AV +
Sbjct: 388 PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEI 447
Query: 136 FKEAREAGLCLDGFTLSGVIKAC---REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYG 192
F++ + G+ + ++ ++ AC ++ V + L A G + + N+ + Y
Sbjct: 448 FRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSA-AQSRGINLNTAAYNSAIGSYI 506
Query: 193 GRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGK--EALVLFGEMVRMGMKIDMF 250
L +A ++ M + S I+ G CR K EA+ EM + + +
Sbjct: 507 NAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKE 566
Query: 251 TMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFE 310
+SVL A++ + +M +G
Sbjct: 567 VYSSVLCAYSKQGQVTEAESIFNQMKMAG------------------------------- 595
Query: 311 EISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPS 370
EPD++ + +M+ ++ E + A F +M+ G PD + S + A + PS
Sbjct: 596 --CEPDVIAYTSMLHAYNASEKWGK-ACELFLEMEANGIEPDSIACSALMRAFNKGGQPS 652
Query: 371 LGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDT-------MPEHNTVSL 423
+ L + +IP ++S C L + +R D +P +
Sbjct: 653 NVFVLMDLMREKEIP----FTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLT 708
Query: 424 NSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMK- 482
N M+ + + G ++LF ++ + N T+ +L H V +KY +++
Sbjct: 709 NQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLE---HLLAVGNWRKYIEVLEW 765
Query: 483 -EKFGIEPEAKHFSCMVDLLGRAGKLE 508
GI+P + + ++ R+ +E
Sbjct: 766 MSGAGIQPSNQMYRDIISFGERSAGIE 792
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 124/315 (39%), Gaps = 46/315 (14%)
Query: 319 LWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHAL 378
++N MI ++H + + A F +MQ+ +PD ++ + +A +
Sbjct: 145 IYNMMIRLHARH-NWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDD 203
Query: 379 AIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH----NTVSLNSMITGYAQHG 434
+++ I +R + NN L+ GN +A V M ++ + V+ N +++ Y
Sbjct: 204 MLRAAIAPSRSTYNN-LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 262
Query: 435 VEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFG-IEPEAKH 493
++L FELM + P+ TF ++ + G+ + FN M+EK P+
Sbjct: 263 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVT 322
Query: 494 FSCMVDLLGRAGKLEEAERIIETM---PFDPGSIEWAALLGACRKHGNVELAV------- 543
F+ ++ L G++E + E M P + + AL+GA HG A+
Sbjct: 323 FTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK 382
Query: 544 -------------------------KAANKFLQLEPH----NAVPYVMLSNMYASAGRWE 574
KA FL + N V Y L + Y S G
Sbjct: 383 QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLA 442
Query: 575 ESATVKRLMRERGVK 589
E+ + R M + G+K
Sbjct: 443 EAVEIFRQMEQDGIK 457
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 119/560 (21%), Positives = 212/560 (37%), Gaps = 95/560 (16%)
Query: 85 YNAIIDACVKHSHLHLARELFDEIPR----PDIVSYNTLIAAHAHRGEHGPAVRLFKEAR 140
YN +I +H+ + AR LF E+ + PD +Y+ LI AH G+ A+ L +
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 141 EAGLCLDGFTLSGVIKACREDVGLVMQLHCFAVLCGYSCYASVCNAVLARYGGRGLLSEA 200
A + T + +I AC G G EA
Sbjct: 74 RAAIAPSRSTYNNLINAC---------------------------------GSSGNWREA 100
Query: 201 WRVFHEMGEG--CRDEISWNAMIVACGQCREGKEALVLFGEMVRMGMKIDMFTMASVLTA 258
V +M + D ++ N ++ A R+ +AL F M ++ D T ++
Sbjct: 101 LEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYC 160
Query: 259 FTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFE----EISE 314
+ L + + M + P V + M+ + +C VFE E +
Sbjct: 161 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 220
Query: 315 PDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQ 374
P++V +N ++ ++ H +S AL D+++ G PD S++C+ ++ P K+
Sbjct: 221 PNIVSYNALMGAYAVH-GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 279
Query: 375 VHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH---------------- 418
V + K N V+ NAL+ Y G L +A +F M +
Sbjct: 280 VFLMMRKERRKPNVVTY-NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 338
Query: 419 -----------------------NTVSLNSMITGYAQHGVEGESLQLFELMMQEDIVPNN 455
NT + NS I Y +++ L++ M ++ + ++
Sbjct: 339 SRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADS 398
Query: 456 ITFISVLSACAHTGKVEEGQKYFNMMKEKFGIEPEAKHFSCMVDLLGRAGKLEEAERIIE 515
+TF ++S K E Y M E I + +S ++ + G++ EAE I
Sbjct: 399 VTFTILISGSCRMSKYPEAISYLKEM-EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFN 457
Query: 516 TMPF---DPGSIEWAALLGACRKHGNVELAVKAANKFLQLEPHNAVPYVM----LSNMYA 568
M +P I + ++L A + E KA FL++E + P + L +
Sbjct: 458 QMKMAGCEPDVIAYTSMLHA---YNASEKWGKACELFLEMEANGIEPDSIACSALMRAFN 514
Query: 569 SAGRWEESATVKRLMRERGV 588
G+ + LMRE+ +
Sbjct: 515 KGGQPSNVFVLMDLMREKEI 534
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 88/447 (19%), Positives = 176/447 (39%), Gaps = 60/447 (13%)
Query: 80 PNVFSYNAIIDACVKHSHLHLARELF----DEIPRPDIVSYNTLIAAHAHRGEHGPAVRL 135
P+V SY ++++ + A+E+F E +P++V+YN LI A+ G AV +
Sbjct: 256 PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEI 315
Query: 136 FKEAREAGLCLDGFTLSGVIKAC---REDVGLVMQLHCFAVLCGYSCYASVCNAVLARYG 192
F++ + G+ + ++ ++ AC ++ V + L A G + + N+ + Y
Sbjct: 316 FRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSA-AQSRGINLNTAAYNSAIGSYI 374
Query: 193 GRGLLSEAWRVFHEMGEGCRDEISWNAMIVACGQCREGK--EALVLFGEMVRMGMKIDMF 250
L +A ++ M + S I+ G CR K EA+ EM + + +
Sbjct: 375 NAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKE 434
Query: 251 TMASVLTAFTCLEDLAGGMQFHGRMIKSGFNWNPHVGSGLIDMYSKCAPRGMLDCMKVFE 310
+SVL A++ + +M +G
Sbjct: 435 VYSSVLCAYSKQGQVTEAESIFNQMKMAG------------------------------- 463
Query: 311 EISEPDLVLWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPS 370
EPD++ + +M+ ++ E + A F +M+ G PD + S + A + PS
Sbjct: 464 --CEPDVIAYTSMLHAYNASEKWGK-ACELFLEMEANGIEPDSIACSALMRAFNKGGQPS 520
Query: 371 LGKQVHALAIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDT-------MPEHNTVSL 423
+ L + +IP ++S C L + +R D +P +
Sbjct: 521 NVFVLMDLMREKEIP----FTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLT 576
Query: 424 NSMITGYAQHGVEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMK- 482
N M+ + + G ++LF ++ + N T+ +L H V +KY +++
Sbjct: 577 NQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLE---HLLAVGNWRKYIEVLEW 633
Query: 483 -EKFGIEPEAKHFSCMVDLLGRAGKLE 508
GI+P + + ++ R+ +E
Sbjct: 634 MSGAGIQPSNQMYRDIISFGERSAGIE 660
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 124/315 (39%), Gaps = 46/315 (14%)
Query: 319 LWNTMISGFSQHEDLSEDALICFQDMQRAGFRPDDCSFSCVTSACSNLSSPSLGKQVHAL 378
++N MI ++H + + A F +MQ+ +PD ++ + +A +
Sbjct: 13 IYNMMIRLHARH-NWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDD 71
Query: 379 AIKSDIPSNRVSVNNALVAMYSKCGNLHDARRVFDTMPEH----NTVSLNSMITGYAQHG 434
+++ I +R + NN L+ GN +A V M ++ + V+ N +++ Y
Sbjct: 72 MLRAAIAPSRSTYNN-LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 130
Query: 435 VEGESLQLFELMMQEDIVPNNITFISVLSACAHTGKVEEGQKYFNMMKEKFG-IEPEAKH 493
++L FELM + P+ TF ++ + G+ + FN M+EK P+
Sbjct: 131 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVT 190
Query: 494 FSCMVDLLGRAGKLEEAERIIETM---PFDPGSIEWAALLGACRKHGNVELAV------- 543
F+ ++ L G++E + E M P + + AL+GA HG A+
Sbjct: 191 FTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK 250
Query: 544 -------------------------KAANKFLQLEPH----NAVPYVMLSNMYASAGRWE 574
KA FL + N V Y L + Y S G
Sbjct: 251 QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLA 310
Query: 575 ESATVKRLMRERGVK 589
E+ + R M + G+K
Sbjct: 311 EAVEIFRQMEQDGIK 325