Miyakogusa Predicted Gene

Lj6g3v0938260.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0938260.1 Non Chatacterized Hit- tr|I1KXV1|I1KXV1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,71.93,0,ARM
repeat,Armadillo-type fold; seg,NULL; coiled-coil,NULL; Middle domain
of eukaryotic initiation f,CUFF.58716.1
         (811 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G80930.1 | Symbols:  | MIF4G domain-containing protein / MA3 ...   895   0.0  
AT1G52325.1 | Symbols:  | Initiation factor eIF-4 gamma, MA3 | c...   102   1e-21
AT5G17930.1 | Symbols:  | MIF4G domain-containing protein / MA3 ...    76   1e-13

>AT1G80930.1 | Symbols:  | MIF4G domain-containing protein / MA3
           domain-containing protein | chr1:30405774-30409499
           REVERSE LENGTH=900
          Length = 900

 Score =  895 bits (2313), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/539 (79%), Positives = 467/539 (86%), Gaps = 5/539 (0%)

Query: 234 ASNLGKSGGVYIPPFKLARMMKEVEDKSSPEYQRLTWDALRKSINGLVNKVNATNIKNII 293
           A  LGK+GGVYIPPFKLARMMKEVEDKSS EYQRLTWDALRKSINGLVNKVNA+NIKNII
Sbjct: 323 AMALGKTGGVYIPPFKLARMMKEVEDKSSVEYQRLTWDALRKSINGLVNKVNASNIKNII 382

Query: 294 PELLSENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGEXXXXXXXXXXX 353
           PEL +ENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAV+N KFPEV E           
Sbjct: 383 PELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVINAKFPEVAELLLKRVVLQLK 442

Query: 354 XAYKRNDKPQLLAAVKFVAHLVNQQVAHEIIALELLTVLLEKPTDDSVEVAVGFVTECGS 413
            AYKRNDKPQLLAAVKF+AHLVNQQVA EIIALEL+T+LL  PTDDSVEVAVGFVTECG+
Sbjct: 443 RAYKRNDKPQLLAAVKFIAHLVNQQVAEEIIALELVTILLGDPTDDSVEVAVGFVTECGA 502

Query: 414 ILQELSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAVRKAKFQGYPAVRPELDLVEL 473
           +LQ++SP+GL+GIFERFRGILHEGEIDKRVQ+LIE LFA RKAKFQG+PAVRPELDLV  
Sbjct: 503 MLQDVSPRGLNGIFERFRGILHEGEIDKRVQYLIESLFATRKAKFQGHPAVRPELDLV-- 560

Query: 474 EDQLTHEVSLDEAIDPDTSLDIFKVDPNYMENEKRYEELKKTILXXXXXXXXXXXXXXXX 533
           E++ +H++SLD  IDP+T+LDIFK DP+++ENEK+YE LKK +L                
Sbjct: 561 EEKYSHDLSLDHEIDPETALDIFKPDPDFVENEKKYEALKKELL---GDEESEDEDGSDA 617

Query: 534 XXXXXXXXXXXXXXXXXXXMQIQDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIHLE 593
                              M+I+DETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKI LE
Sbjct: 618 SSEDNDEEEDESDEEDEEQMRIRDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLE 677

Query: 594 PGQEMELCIMLLECCSQERTYLRYYGLLGQRFCVINKVHQENFEKCFVQQYSMIHRLETN 653
           PGQEMELCIMLLECCSQERTYLRYYGLLGQRFC+INK+HQENFEKCFVQQYSMIHRLETN
Sbjct: 678 PGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKIHQENFEKCFVQQYSMIHRLETN 737

Query: 654 KLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIKLLNER 713
           KLRNVAKFFAHLLGTDALPWHVL+YIRLTEEDTTSSSRIFIKILFQELSEHLGI+LLNER
Sbjct: 738 KLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNER 797

Query: 714 LNDPTMQDSFECIFPKDNPKNTRFCINFFTSIGLGGLTENLREYLKNMPRLIMQQQKQV 772
           L DPTMQ+S E IFPKDNPKNTRF INFFTSIGLGG+TENLREYLKNMP LIMQ+QKQV
Sbjct: 798 LQDPTMQESLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPSLIMQRQKQV 856


>AT1G52325.1 | Symbols:  | Initiation factor eIF-4 gamma, MA3 |
           chr1:19487793-19488418 REVERSE LENGTH=145
          Length = 145

 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 49/75 (65%), Positives = 61/75 (81%)

Query: 684 EDTTSSSRIFIKILFQELSEHLGIKLLNERLNDPTMQDSFECIFPKDNPKNTRFCINFFT 743
           ED+TSSS IF+K LF +LSE L IKLLNE+L DPTM+++FE IFPKD+ KNT F I FFT
Sbjct: 46  EDSTSSSLIFLKTLFLQLSELLRIKLLNEKLQDPTMEETFESIFPKDHRKNTLFSIIFFT 105

Query: 744 SIGLGGLTENLREYL 758
            IGLGG+T+ LR+ +
Sbjct: 106 KIGLGGITQTLRQLI 120



 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 32/44 (72%), Positives = 39/44 (88%)

Query: 575 MSSVDFEEAGHKLLKIHLEPGQEMELCIMLLECCSQERTYLRYY 618
           MSS+DFEEAGHKLLKI LE GQ MELC+M+LECC++E+TY  +Y
Sbjct: 1   MSSLDFEEAGHKLLKIRLEQGQGMELCVMVLECCTEEKTYRSFY 44


>AT5G17930.1 | Symbols:  | MIF4G domain-containing protein / MA3
           domain-containing protein | chr5:5940131-5943952 REVERSE
           LENGTH=784
          Length = 784

 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 74/139 (53%), Gaps = 1/139 (0%)

Query: 567 RRTIYLTIMSSVDFEEAGHKLLKIHLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFC 626
           R+ I+  IMSS D+ +A  KLL++ L   Q+ E+  +L+ECC QE+ + ++Y +L  + C
Sbjct: 587 RKAIFCVIMSSEDYIDAFEKLLRLDLPGKQDREIMRVLVECCLQEKAFNKFYTVLASKLC 646

Query: 627 VINKVHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDT 686
             +K H+   + C    +  +  +   +  ++AKF A ++ T  L   VL  + L     
Sbjct: 647 EHDKNHKFTLQYCIWDHFKELESMSLQRSMHLAKFVAEIIVTFNLSLAVLKSVDLANPVE 706

Query: 687 TSSSRIF-IKILFQELSEH 704
            +  RI   ++LF+ + EH
Sbjct: 707 LTPKRIMHFRMLFEAIFEH 725