Miyakogusa Predicted Gene

Lj6g3v0937010.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0937010.1 tr|G7J013|G7J013_MEDTR Alanine glyoxylate
aminotransferase OS=Medicago truncatula GN=MTR_3g053890 PE,90.52,0,no
description,Pyridoxal phosphate-dependent transferase, major region,
subdomain 1; no description,,CUFF.58695.1
         (401 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G13360.2 | Symbols: AGT, AGT1, SGAT | alanine:glyoxylate amin...   697   0.0  
AT2G13360.1 | Symbols: AGT, AGT1, SGAT | alanine:glyoxylate amin...   697   0.0  

>AT2G13360.2 | Symbols: AGT, AGT1, SGAT | alanine:glyoxylate
           aminotransferase | chr2:5539417-5540902 REVERSE
           LENGTH=401
          Length = 401

 Score =  697 bits (1800), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/401 (82%), Positives = 362/401 (90%)

Query: 1   MDYFNAPGRHHLFVPGPVNIPEQVIRAMNRNNEDYRAPAIPALTKTLLEDVKKIFKXXXX 60
           MDY   PGRHHLFVPGPVNIPE VIRAMNRNNEDYR+PAIPALTKTLLEDVKKIFK    
Sbjct: 1   MDYMYGPGRHHLFVPGPVNIPEPVIRAMNRNNEDYRSPAIPALTKTLLEDVKKIFKTTSG 60

Query: 61  XXXXXXXXXXXAWESALTNTLSPGDRTVSFLIGQFSLLWIDQQQRLNFNVDVVESEWGRG 120
                      AWESALTNTLSPGDR VSFLIGQFSLLWIDQQ+RLNFNVDVVES+WG+G
Sbjct: 61  TPFLFPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQKRLNFNVDVVESDWGQG 120

Query: 121 ADLDVLESKLASDSAHTIKAICIVHNETATGVTNDLSKVRKLLDAYNHPALLIVDGVSSI 180
           A+L VL SKL+ D  HTIKAICIVHNETATGVTND+S VR LLD Y HPALL+VDGVSSI
Sbjct: 121 ANLQVLASKLSQDENHTIKAICIVHNETATGVTNDISAVRTLLDHYKHPALLLVDGVSSI 180

Query: 181 CALDFRMDEWGVDVAITGSQKALSLPTGMGIVCASPKALEASKYAKSLRVFFDWKDYLKF 240
           CALDFRMDEWGVDVA+TGSQKALSLPTG+GIVCASPKALEA+K +KSL+VFFDW DYLKF
Sbjct: 181 CALDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEATKTSKSLKVFFDWNDYLKF 240

Query: 241 YEMGTYWPYTPSIQLLYGLRTALDLLFEEGLENVFARHKRLGKATRIAVEAWGLKNCTQK 300
           Y++GTYWPYTPSIQLLYGLR ALDL+FEEGLEN+ ARH RLGKATR+AVEAWGLKNCTQK
Sbjct: 241 YKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENIIARHARLGKATRLAVEAWGLKNCTQK 300

Query: 301 EEWFSDTVTAVVVPPYIDGAEVVKRSWKRYNMSLGLGLNKVAGKVFRIGHLGNLNELQLL 360
           EEW S+TVTAV+VPP+IDG+E+V+R+W+RYN+SLGLGLNKVAGKVFRIGHLGN+NELQLL
Sbjct: 301 EEWISNTVTAVMVPPHIDGSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGNVNELQLL 360

Query: 361 GALAGVEMILQDVGYPVKLGSGVAAASAYLQNTIPMIPSRI 401
           G LAGVEMIL+DVGYPV +GSGVAAAS YLQ+ IP+IPSRI
Sbjct: 361 GCLAGVEMILKDVGYPVVMGSGVAAASTYLQHHIPLIPSRI 401


>AT2G13360.1 | Symbols: AGT, AGT1, SGAT | alanine:glyoxylate
           aminotransferase | chr2:5539417-5540902 REVERSE
           LENGTH=401
          Length = 401

 Score =  697 bits (1800), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/401 (82%), Positives = 362/401 (90%)

Query: 1   MDYFNAPGRHHLFVPGPVNIPEQVIRAMNRNNEDYRAPAIPALTKTLLEDVKKIFKXXXX 60
           MDY   PGRHHLFVPGPVNIPE VIRAMNRNNEDYR+PAIPALTKTLLEDVKKIFK    
Sbjct: 1   MDYMYGPGRHHLFVPGPVNIPEPVIRAMNRNNEDYRSPAIPALTKTLLEDVKKIFKTTSG 60

Query: 61  XXXXXXXXXXXAWESALTNTLSPGDRTVSFLIGQFSLLWIDQQQRLNFNVDVVESEWGRG 120
                      AWESALTNTLSPGDR VSFLIGQFSLLWIDQQ+RLNFNVDVVES+WG+G
Sbjct: 61  TPFLFPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQKRLNFNVDVVESDWGQG 120

Query: 121 ADLDVLESKLASDSAHTIKAICIVHNETATGVTNDLSKVRKLLDAYNHPALLIVDGVSSI 180
           A+L VL SKL+ D  HTIKAICIVHNETATGVTND+S VR LLD Y HPALL+VDGVSSI
Sbjct: 121 ANLQVLASKLSQDENHTIKAICIVHNETATGVTNDISAVRTLLDHYKHPALLLVDGVSSI 180

Query: 181 CALDFRMDEWGVDVAITGSQKALSLPTGMGIVCASPKALEASKYAKSLRVFFDWKDYLKF 240
           CALDFRMDEWGVDVA+TGSQKALSLPTG+GIVCASPKALEA+K +KSL+VFFDW DYLKF
Sbjct: 181 CALDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEATKTSKSLKVFFDWNDYLKF 240

Query: 241 YEMGTYWPYTPSIQLLYGLRTALDLLFEEGLENVFARHKRLGKATRIAVEAWGLKNCTQK 300
           Y++GTYWPYTPSIQLLYGLR ALDL+FEEGLEN+ ARH RLGKATR+AVEAWGLKNCTQK
Sbjct: 241 YKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENIIARHARLGKATRLAVEAWGLKNCTQK 300

Query: 301 EEWFSDTVTAVVVPPYIDGAEVVKRSWKRYNMSLGLGLNKVAGKVFRIGHLGNLNELQLL 360
           EEW S+TVTAV+VPP+IDG+E+V+R+W+RYN+SLGLGLNKVAGKVFRIGHLGN+NELQLL
Sbjct: 301 EEWISNTVTAVMVPPHIDGSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGNVNELQLL 360

Query: 361 GALAGVEMILQDVGYPVKLGSGVAAASAYLQNTIPMIPSRI 401
           G LAGVEMIL+DVGYPV +GSGVAAAS YLQ+ IP+IPSRI
Sbjct: 361 GCLAGVEMILKDVGYPVVMGSGVAAASTYLQHHIPLIPSRI 401