Miyakogusa Predicted Gene
- Lj6g3v0936970.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0936970.1 Non Chatacterized Hit- tr|I1N132|I1N132_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,76.85,0,seg,NULL;
P-loop containing nucleoside triphosphate hydrolases,NULL; HELICASE
CONSERVED C-TERMINAL D,CUFF.58685.1
(563 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 598 e-171
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 581 e-166
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 442 e-124
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 442 e-124
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 410 e-114
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 289 3e-78
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 236 3e-62
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 234 1e-61
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 229 3e-60
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 228 6e-60
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 227 2e-59
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 226 3e-59
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 223 3e-58
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 223 3e-58
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 223 3e-58
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 223 3e-58
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 223 3e-58
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 215 7e-56
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 213 4e-55
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 213 4e-55
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 212 7e-55
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 210 2e-54
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 206 5e-53
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 204 2e-52
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 204 2e-52
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 204 2e-52
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 202 4e-52
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 199 5e-51
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 197 2e-50
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 196 4e-50
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 195 7e-50
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 195 8e-50
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 187 2e-47
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 187 2e-47
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 187 2e-47
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 187 2e-47
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 187 2e-47
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 187 2e-47
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 186 3e-47
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 186 3e-47
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 186 5e-47
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 186 5e-47
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 184 1e-46
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 183 3e-46
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 182 6e-46
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 180 2e-45
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 179 3e-45
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 179 3e-45
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 179 3e-45
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 177 2e-44
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 176 3e-44
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 171 1e-42
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 167 2e-41
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 166 4e-41
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 163 4e-40
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 162 7e-40
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 162 8e-40
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 159 5e-39
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 159 5e-39
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 155 8e-38
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 150 3e-36
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 150 3e-36
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 145 5e-35
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 141 9e-34
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 141 1e-33
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 140 3e-33
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 140 3e-33
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 135 8e-32
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 135 9e-32
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 133 3e-31
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 130 3e-30
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 128 1e-29
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 126 4e-29
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 122 9e-28
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 118 1e-26
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 112 5e-25
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 72 7e-13
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 59 7e-09
AT2G28600.1 | Symbols: | P-loop containing nucleoside triphosph... 50 5e-06
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 598 bits (1541), Expect = e-171, Method: Compositional matrix adjust.
Identities = 287/458 (62%), Positives = 360/458 (78%), Gaps = 15/458 (3%)
Query: 34 SLIAAVTRINGLSDLG-------------ARAFHAKPGLLNFHSSLVSPSAQPALDHDYA 80
+L A TR++ L+ +G A+ H + G L+F +S+VS + + +
Sbjct: 32 NLAPAATRVSDLALIGSSDVKAGFPFGVEAKGIHFQSGPLDFRASMVSQAGFAI--SESS 89
Query: 81 HENDGFTANSSDEGLEIAKLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRAR 140
G + + +GL I++LGIS EIV AL+ KGI KLFPIQ+AVLEPAM+G+DM+GRAR
Sbjct: 90 ERRVGDSESVGGDGLAISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRAR 149
Query: 141 TGTGKTLAFGIPILDKIIQSNAKHGQGRDPLALVLAPTRELARQVENEFKDAAPNLSTIC 200
TGTGKTLAFGIPI+DKII+ NAKHG+GR+PL LVLAPTRELARQVE EF+++AP+L TIC
Sbjct: 150 TGTGKTLAFGIPIIDKIIKYNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDTIC 209
Query: 201 LYGGTPISNQMRELDYGVDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQVGFQE 260
LYGGTPI QMR+LDYGVD+AVGTPGR+IDL+ RG+LNL+ VQFVVLDEADQMLQVGF E
Sbjct: 210 LYGGTPIGQQMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAE 269
Query: 261 DVEKILSRLPPQRQTLMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADGISLYSIA 320
DVE IL +LP +RQ++MFSATMP I+++ + YLN+PLT+DLVGDS+QKLADGI+ YSI
Sbjct: 270 DVEIILEKLPEKRQSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSII 329
Query: 321 SSAYTKAGILAPLITEHANGGKCIVFTQTKRDADRLSYMMSKSLKCEALHGDISQAQRER 380
+ +Y +A I+ PL+TEHA GGKCIVFTQTKRDADRLSY +++S KCEALHGDISQ+QRER
Sbjct: 330 ADSYGRASIIGPLVTEHAKGGKCIVFTQTKRDADRLSYALARSFKCEALHGDISQSQRER 389
Query: 381 TLAGFRNNYFNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHRSXXXXXXXXXXXXI 440
TLAGFR+ +FN+LVATDVA+RGLD+PNVDL+IHY+ PNN+E FVHR+ I
Sbjct: 390 TLAGFRDGHFNILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAI 449
Query: 441 LVYTEVQSRAISTIERDVGCKFTELPKIDVPSGSVDML 478
L+Y++ QSRA+ IER+VG +FTELP I V GS M
Sbjct: 450 LIYSQDQSRAVKIIEREVGSRFTELPSIAVERGSASMF 487
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 581 bits (1498), Expect = e-166, Method: Compositional matrix adjust.
Identities = 280/435 (64%), Positives = 346/435 (79%), Gaps = 7/435 (1%)
Query: 51 RAFHAKPGLLNFHSSLVSPSAQPALDHDYAHENDG-------FTANSSDEGLEIAKLGIS 103
R FH K F SS+VS + A ++ ++ENDG ++ +GL IA LGIS
Sbjct: 65 RDFHVKSVPSEFRSSIVSSAGFAAQEYAPSYENDGGIGDSESVGSSGGGDGLAIADLGIS 124
Query: 104 QEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQSNAK 163
EIV AL +GI KLFPIQ+AVLEPAM+G+DM+GRARTGTGKTLAFGIPI+DKII+ NAK
Sbjct: 125 PEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKFNAK 184
Query: 164 HGQGRDPLALVLAPTRELARQVENEFKDAAPNLSTICLYGGTPISNQMRELDYGVDIAVG 223
HG+G++P LVLAPTRELARQVE EF+++AP+L TICLYGGTPI QMREL+YG+D+AVG
Sbjct: 185 HGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRELNYGIDVAVG 244
Query: 224 TPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQTLMFSATMP 283
TPGRIIDL+ RG+LNL+ VQFVVLDEADQMLQVGF EDVE IL +LP +RQ++MFSATMP
Sbjct: 245 TPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSMMFSATMP 304
Query: 284 PEIKNIIRNYLNSPLTIDLVGDSNQKLADGISLYSIASSAYTKAGILAPLITEHANGGKC 343
I+++ + YLN+PLTIDLVGDS+QKLADGI++YSIA+ +Y +A I+ PL+ EH GGKC
Sbjct: 305 SWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKEHGKGGKC 364
Query: 344 IVFTQTKRDADRLSYMMSKSLKCEALHGDISQAQRERTLAGFRNNYFNVLVATDVASRGL 403
IVFTQTKRDADRL++ ++KS KCEALHGDISQAQRERTLAGFR+ F++LVATDVA+RGL
Sbjct: 365 IVFTQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAARGL 424
Query: 404 DIPNVDLVIHYDPPNNSEIFVHRSXXXXXXXXXXXXILVYTEVQSRAISTIERDVGCKFT 463
D+PNVDLVIHY+ PNN+E FVHR+ IL++ + Q+RA+ IE++VG +F
Sbjct: 425 DVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIEKEVGSRFN 484
Query: 464 ELPKIDVPSGSVDML 478
ELP I V GS M
Sbjct: 485 ELPSIAVERGSASMF 499
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 442 bits (1136), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/393 (56%), Positives = 282/393 (71%), Gaps = 6/393 (1%)
Query: 76 DHD-YAHENDGFTANSSD-EGLEIAKLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQ 133
DHD Y + D + D E L I+KL + Q + ++L K+GI LFPIQRAVL PA++G+
Sbjct: 81 DHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGR 140
Query: 134 DMVGRARTGTGKTLAFGIPILDKIIQS----NAKHGQGRDPLALVLAPTRELARQVENEF 189
D++ RA+TGTGKTLAFGIPI+ ++ + A GR P LVLAPTRELA+QVE E
Sbjct: 141 DIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEI 200
Query: 190 KDAAPNLSTICLYGGTPISNQMRELDYGVDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDE 249
K++AP LST+C+YGG + Q L GVD+ VGTPGRIIDL+ SL L V+++VLDE
Sbjct: 201 KESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDE 260
Query: 250 ADQMLQVGFQEDVEKILSRLPPQRQTLMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQK 309
ADQML VGF+E VE IL LP +RQ+++FSATMP +K + R YL++PL IDLVGD ++K
Sbjct: 261 ADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEK 320
Query: 310 LADGISLYSIASSAYTKAGILAPLITEHANGGKCIVFTQTKRDADRLSYMMSKSLKCEAL 369
LA+GI LY+IA+++ +K IL+ LIT +A GGK IVFTQTKRDAD +S +S S+ EAL
Sbjct: 321 LAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEAL 380
Query: 370 HGDISQAQRERTLAGFRNNYFNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHRSXX 429
HGDISQ QRERTL FR F VLVATDVASRGLDIPNVDLVIHY+ PN+ E FVHRS
Sbjct: 381 HGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGR 440
Query: 430 XXXXXXXXXXILVYTEVQSRAISTIERDVGCKF 462
IL++T Q R + ++ERDVGC F
Sbjct: 441 TGRAGKEGSAILMHTSSQKRTVRSLERDVGCHF 473
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 442 bits (1136), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/393 (56%), Positives = 282/393 (71%), Gaps = 6/393 (1%)
Query: 76 DHD-YAHENDGFTANSSD-EGLEIAKLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQ 133
DHD Y + D + D E L I+KL + Q + ++L K+GI LFPIQRAVL PA++G+
Sbjct: 81 DHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGR 140
Query: 134 DMVGRARTGTGKTLAFGIPILDKIIQS----NAKHGQGRDPLALVLAPTRELARQVENEF 189
D++ RA+TGTGKTLAFGIPI+ ++ + A GR P LVLAPTRELA+QVE E
Sbjct: 141 DIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEI 200
Query: 190 KDAAPNLSTICLYGGTPISNQMRELDYGVDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDE 249
K++AP LST+C+YGG + Q L GVD+ VGTPGRIIDL+ SL L V+++VLDE
Sbjct: 201 KESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDE 260
Query: 250 ADQMLQVGFQEDVEKILSRLPPQRQTLMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQK 309
ADQML VGF+E VE IL LP +RQ+++FSATMP +K + R YL++PL IDLVGD ++K
Sbjct: 261 ADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEK 320
Query: 310 LADGISLYSIASSAYTKAGILAPLITEHANGGKCIVFTQTKRDADRLSYMMSKSLKCEAL 369
LA+GI LY+IA+++ +K IL+ LIT +A GGK IVFTQTKRDAD +S +S S+ EAL
Sbjct: 321 LAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEAL 380
Query: 370 HGDISQAQRERTLAGFRNNYFNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHRSXX 429
HGDISQ QRERTL FR F VLVATDVASRGLDIPNVDLVIHY+ PN+ E FVHRS
Sbjct: 381 HGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGR 440
Query: 430 XXXXXXXXXXILVYTEVQSRAISTIERDVGCKF 462
IL++T Q R + ++ERDVGC F
Sbjct: 441 TGRAGKEGSAILMHTSSQKRTVRSLERDVGCHF 473
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 410 bits (1053), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/344 (59%), Positives = 253/344 (73%), Gaps = 4/344 (1%)
Query: 123 RAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQS----NAKHGQGRDPLALVLAPT 178
RAVL PA++G+D++ RA+TGTGKTLAFGIPI+ ++ + A GR P LVLAPT
Sbjct: 37 RAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPT 96
Query: 179 RELARQVENEFKDAAPNLSTICLYGGTPISNQMRELDYGVDIAVGTPGRIIDLLNRGSLN 238
RELA+QVE E K++AP LST+C+YGG + Q L GVD+ VGTPGRIIDL+ SL
Sbjct: 97 RELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLK 156
Query: 239 LNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQTLMFSATMPPEIKNIIRNYLNSPL 298
L V+++VLDEADQML VGF+E VE IL LP +RQ+++FSATMP +K + R YL++PL
Sbjct: 157 LGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPL 216
Query: 299 TIDLVGDSNQKLADGISLYSIASSAYTKAGILAPLITEHANGGKCIVFTQTKRDADRLSY 358
IDLVGD ++KLA+GI LY+IA+++ +K IL+ LIT +A GGK IVFTQTKRDAD +S
Sbjct: 217 NIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSL 276
Query: 359 MMSKSLKCEALHGDISQAQRERTLAGFRNNYFNVLVATDVASRGLDIPNVDLVIHYDPPN 418
+S S+ EALHGDISQ QRERTL FR F VLVATDVASRGLDIPNVDLVIHY+ PN
Sbjct: 277 ALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPN 336
Query: 419 NSEIFVHRSXXXXXXXXXXXXILVYTEVQSRAISTIERDVGCKF 462
+ E FVHRS IL++T Q R + ++ERDVGC F
Sbjct: 337 DPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHF 380
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 167/379 (44%), Positives = 234/379 (61%), Gaps = 15/379 (3%)
Query: 97 IAKLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDK 156
++K IS + + L GI LFPIQ + + + G D+VGRARTG GKTLAF +PIL+
Sbjct: 98 VSKFRISAPLREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILES 157
Query: 157 II----QSNAKHGQGRDPLALVLAPTRELARQVENEFKDA---APNLSTICLYGGTPISN 209
++ +S K G GR P LVL PTRELA+QV +F DA + LS+ CLYGG
Sbjct: 158 LVNGPAKSKRKMGYGRSPSVLVLLPTRELAKQVAADF-DAYGGSLGLSSCCLYGGDSYPV 216
Query: 210 QMRELDYGVDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRL 269
Q +L GVDI VGTPGRI D + R +L+ + +QF VLDEAD+ML++GF EDVE IL ++
Sbjct: 217 QEGKLKRGVDIVVGTPGRIKDHIERQNLDFSYLQFRVLDEADEMLRMGFVEDVELILGKV 276
Query: 270 --PPQRQTLMFSATMPPEIKNIIRNYLN-SPLTIDLVGDSNQKLADGISLYSIASSAYTK 326
+ QTL+FSAT+P +KNI +L TIDLVG+ K ++ + +I +
Sbjct: 277 EDSTKVQTLLFSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRHIAIPCNKAAM 336
Query: 327 AGILAPLITEHANGGKCIVFTQTKRDADRLSYMMSKSLKCEALHGDISQAQRERTLAGFR 386
A ++ +I+ +++GG+ I+F +TK LS ++ S ALHG+I Q+QRE TLAGFR
Sbjct: 337 ARLIPDIISCYSSGGQTIIFAETKVQVSELSGLLDGS---RALHGEIPQSQREVTLAGFR 393
Query: 387 NNYFNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHRSXXXXXXXXXXXXILVYTEV 446
N F LVAT+VA+RGLDI +V L+I +PP E ++HRS + +Y
Sbjct: 394 NGKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIHRSGRTGRAGNTGVAVTLYDSR 453
Query: 447 QSRAISTIERDVGCKFTEL 465
+S ++S IE++ G KF L
Sbjct: 454 KS-SVSRIEKEAGIKFEHL 471
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 138/379 (36%), Positives = 222/379 (58%), Gaps = 22/379 (5%)
Query: 61 NFHSSLVSPSAQPALDHD---YAHENDGFTANSSDEGLEIAK-LGISQE------IVDAL 110
NF+ + SP+ Q + D Y E D S EG ++ K + + Q+ I++A+
Sbjct: 128 NFY--VESPTVQAMTEQDVAMYRTERD-----ISVEGRDVPKPMKMFQDANFPDNILEAI 180
Query: 111 AKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQSNAKHGQGRDP 170
AK G + PIQ A+KG+D++G A TG+GKTLA+ +P L + + + GQ P
Sbjct: 181 AKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHV-SAQPRLGQDDGP 239
Query: 171 LALVLAPTRELARQVENEFKDAA--PNLSTICLYGGTPISNQMRELDYGVDIAVGTPGRI 228
+ L+LAPTRELA Q++ E + + + C+YGG P Q+R+L GV+I + TPGR+
Sbjct: 240 IVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRL 299
Query: 229 IDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQTLMFSATMPPEIKN 288
ID+L NL V ++VLDEAD+ML +GF+ + KI+S++ P RQTL++SAT P E++
Sbjct: 300 IDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVET 359
Query: 289 IIRNYLNSPLTIDLVGDSNQKLADGISLYSIASSAYTKAGILAPLITEHANGGKCIVFTQ 348
+ R +L P ++G ++ K I+ K L L+ + +G K ++F +
Sbjct: 360 LARQFLRDPYKA-IIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVE 418
Query: 349 TKRDADRLSYMMS-KSLKCEALHGDISQAQRERTLAGFRNNYFNVLVATDVASRGLDIPN 407
TKR D+++ + A+HGD +Q++R+R LA F++ ++ ATDVA+RGLD+ +
Sbjct: 419 TKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKD 478
Query: 408 VDLVIHYDPPNNSEIFVHR 426
+ V++YD PN E ++HR
Sbjct: 479 IKCVVNYDFPNTLEDYIHR 497
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/348 (37%), Positives = 205/348 (58%), Gaps = 20/348 (5%)
Query: 93 EGLEIAK-------LGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGK 145
EG +I K +G +++ + K G + PIQ AMKG+D++G A TG+GK
Sbjct: 90 EGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGK 149
Query: 146 TLAFGIPILDKIIQSNAK----HGQGRDPLALVLAPTRELARQVENEFKD--AAPNLSTI 199
TL++ +P I+ NA+ HG G P+ LVLAPTRELA Q++ E ++ + T
Sbjct: 150 TLSYLLPA---IVHVNAQPMLAHGDG--PIVLVLAPTRELAVQIQQEASKFGSSSKIKTT 204
Query: 200 CLYGGTPISNQMRELDYGVDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQVGFQ 259
C+YGG P Q+R+L GV+I + TPGR+ID++ + NL V ++VLDEAD+ML +GF
Sbjct: 205 CIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFD 264
Query: 260 EDVEKILSRLPPQRQTLMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADGISLYSI 319
+ KI+S + P RQTL +SAT P E++ + + +L +P + ++G S+ K I
Sbjct: 265 PQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKV-IIGSSDLKANRAIRQIVD 323
Query: 320 ASSAYTKAGILAPLITEHANGGKCIVFTQTKRDADRLSYMMS-KSLKCEALHGDISQAQR 378
S K L L+ + +G + +VF TK+ D+++ + ++HGD SQA+R
Sbjct: 324 VISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAER 383
Query: 379 ERTLAGFRNNYFNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
+ L+ FR+ ++ ATDVA+RGLD+ +V VI+YD P + E +VHR
Sbjct: 384 DWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHR 431
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/337 (37%), Positives = 203/337 (60%), Gaps = 15/337 (4%)
Query: 99 KLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKII 158
+ G++ +I+D + K K PIQ L M G+D +G A+TG+GKTL F +P+L I
Sbjct: 195 QTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIK 254
Query: 159 -QSNAKHGQGRDPLALVLAPTRELARQVENEFKDAAPNLSTICL--YGGTPISNQMRELD 215
Q + G G P+ LV+APTREL +Q+ ++ + + L C+ YGG+ ++ Q+ EL
Sbjct: 255 DQPPVEAGDG--PIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELK 312
Query: 216 YGVDIAVGTPGRIIDLLNRGS---LNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQ 272
G +I V TPGR+ID+L S NL V F+V+DEAD+M +GF+ + +I+ + P+
Sbjct: 313 RGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPE 372
Query: 273 RQTLMFSATMPPEIKNIIRNYLNSPLTIDLVGDS--NQKLADGISLYSIASSAYTKAGIL 330
RQT++FSAT P +++ + R LN P+ I + G S N+ + + + S + + L
Sbjct: 373 RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRP-ESDRFLR---L 428
Query: 331 APLITEHANGGKCIVFTQTKRDADRLSY-MMSKSLKCEALHGDISQAQRERTLAGFRNNY 389
L+ E + GK +VF Q++ D L M+ S C +LHG Q RE T++ F+N+
Sbjct: 429 LELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDV 488
Query: 390 FNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
N+L+AT VA+RGLD+ ++LV+++D PN+ E +VHR
Sbjct: 489 CNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHR 525
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 228 bits (582), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 128/337 (37%), Positives = 203/337 (60%), Gaps = 15/337 (4%)
Query: 99 KLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKII 158
+ G++ +I+D + K K PIQ L M G+D +G A+TG+GKTL F +P+L I
Sbjct: 533 QTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIK 592
Query: 159 -QSNAKHGQGRDPLALVLAPTRELARQVENEFKDAAPNLSTICL--YGGTPISNQMRELD 215
Q + G G P+ LV+APTREL +Q+ ++ + + L C+ YGG+ ++ Q+ EL
Sbjct: 593 DQPPVEAGDG--PIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELK 650
Query: 216 YGVDIAVGTPGRIIDLLNRGS---LNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQ 272
G +I V TPGR+ID+L S NL V F+V+DEAD+M +GF+ + +I+ + P+
Sbjct: 651 RGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPE 710
Query: 273 RQTLMFSATMPPEIKNIIRNYLNSPLTIDLVGDS--NQKLADGISLYSIASSAYTKAGIL 330
RQT++FSAT P +++ + R LN P+ I + G S N+ + + + S + + L
Sbjct: 711 RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRP-ESDRFLR---L 766
Query: 331 APLITEHANGGKCIVFTQTKRDADRLSY-MMSKSLKCEALHGDISQAQRERTLAGFRNNY 389
L+ E + GK +VF Q++ D L M+ S C +LHG Q RE T++ F+N+
Sbjct: 767 LELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDV 826
Query: 390 FNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
N+L+AT VA+RGLD+ ++LV+++D PN+ E +VHR
Sbjct: 827 CNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHR 863
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/332 (38%), Positives = 205/332 (61%), Gaps = 12/332 (3%)
Query: 101 GISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKI--I 158
G+ E++ + G + PIQ AM+ +D+V A+TG+GKTL + IP + I
Sbjct: 167 GLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRI 226
Query: 159 QSNAKHGQGRDPLALVLAPTRELARQVENE---FKDAAPNLSTICLYGGTPISNQMRELD 215
++++ G P LVL+PTRELA Q++ E F ++ +S CLYGG P Q++E++
Sbjct: 227 HNDSRMG----PTILVLSPTRELATQIQVEALKFGKSS-KISCACLYGGAPKGPQLKEIE 281
Query: 216 YGVDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQT 275
GVDI V TPGR+ D+L ++L+ V ++VLDEAD+ML +GF+ + KI++ +P +RQT
Sbjct: 282 RGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQT 341
Query: 276 LMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADGISLYSIASSA-YTKAGILAPLI 334
LM++AT P E++ I + L +P ++ +G+ ++ +A+ +I A K L ++
Sbjct: 342 LMYTATWPKEVRKIAADLLVNPAQVN-IGNVDELVANKSITQTIEVLAPMEKHSRLEQIL 400
Query: 335 TEHANGGKCIVFTQTKRDADRLSYMMSKSLKCEALHGDISQAQRERTLAGFRNNYFNVLV 394
G K I+F TKR D+L+ ++++ A+HGD SQA+R+ L FR+ VLV
Sbjct: 401 RSQEPGSKIIIFCSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLV 460
Query: 395 ATDVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
ATDVA+RGLD+ ++ +V++YD PN E +VHR
Sbjct: 461 ATDVAARGLDVKDIRVVVNYDFPNGVEDYVHR 492
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 212/386 (54%), Gaps = 19/386 (4%)
Query: 54 HAKPGLLN-------FHSSLVSPSAQPALDHDYAHENDGFTANSSDEGLEIAKLGISQEI 106
HA P N F +S P P + HE N + G+ EI
Sbjct: 387 HAGPAFPNKSLVRPHFVTSPDVPHLSPVEIYRKQHEVTTTGENIPAPYITFESSGLPPEI 446
Query: 107 VDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIP--ILDKIIQSNAKH 164
+ L G PIQ A++ +D+V A+TG+GKTL + IP IL + ++++++
Sbjct: 447 LRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFILLRHCRNDSRN 506
Query: 165 GQGRDPLALVLAPTRELARQVENE---FKDAAPNLSTICLYGGTPISNQMRELDYGVDIA 221
G P L+LAPTRELA Q+++E F ++ +S CLYGG P Q++EL+ G DI
Sbjct: 507 G----PTVLILAPTRELATQIQDEALRFGRSS-RISCTCLYGGAPKGPQLKELERGADIV 561
Query: 222 VGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQTLMFSAT 281
V TPGR+ D+L ++ V +VLDEAD+ML +GF+ + KI++ +PP+RQTLM++AT
Sbjct: 562 VATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTAT 621
Query: 282 MPPEIKNIIRNYLNSPLTIDLVGDSNQKLAD-GISLYSIASSAYTKAGILAPLITEHANG 340
P E++ I + L +P+ ++ +G ++ A+ I+ Y K L ++ G
Sbjct: 622 WPKEVRKIASDLLVNPVQVN-IGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQERG 680
Query: 341 GKCIVFTQTKRDADRLSYMMSKSLKCEALHGDISQAQRERTLAGFRNNYFNVLVATDVAS 400
K I+F TKR D L+ + + +HGD +Q +R+ L FR+ VL+ATDVA+
Sbjct: 681 SKVIIFCSTKRLCDHLARSVGRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAA 740
Query: 401 RGLDIPNVDLVIHYDPPNNSEIFVHR 426
RGLDI ++ +VI+YD P E +VHR
Sbjct: 741 RGLDIKDIRVVINYDFPTGVEDYVHR 766
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 126/319 (39%), Positives = 199/319 (62%), Gaps = 12/319 (3%)
Query: 114 GIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKI--IQSNAKHGQGRDPL 171
G + PIQ AM+ +D+V A+TG+GKTL + IP + I ++++ G P
Sbjct: 248 GFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRMG----PT 303
Query: 172 ALVLAPTRELARQVENE---FKDAAPNLSTICLYGGTPISNQMRELDYGVDIAVGTPGRI 228
LVL+PTRELA Q++ E F ++ +S CLYGG P Q++E++ GVDI V TPGR+
Sbjct: 304 ILVLSPTRELATQIQVEALKFGKSS-KISCACLYGGAPKGPQLKEIERGVDIVVATPGRL 362
Query: 229 IDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQTLMFSATMPPEIKN 288
D+L ++L+ V ++VLDEAD+ML +GF+ + KI++ +P +RQTLM++AT P E++
Sbjct: 363 NDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRK 422
Query: 289 IIRNYLNSPLTIDLVGDSNQKLADGISLYSIASSA-YTKAGILAPLITEHANGGKCIVFT 347
I + L +P ++ +G+ ++ +A+ +I A K L ++ G K I+F
Sbjct: 423 IAADLLVNPAQVN-IGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPGSKIIIFC 481
Query: 348 QTKRDADRLSYMMSKSLKCEALHGDISQAQRERTLAGFRNNYFNVLVATDVASRGLDIPN 407
TKR D+L+ ++++ A+HGD SQA+R+ L FR+ VLVATDVA+RGLD+ +
Sbjct: 482 STKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKD 541
Query: 408 VDLVIHYDPPNNSEIFVHR 426
+ +V++YD PN E +VHR
Sbjct: 542 IRVVVNYDFPNGVEDYVHR 560
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/332 (37%), Positives = 200/332 (60%), Gaps = 12/332 (3%)
Query: 101 GISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKI--I 158
G E++ + G + PIQ AM+G+D+V A+TG+GKTL + IP + I
Sbjct: 164 GFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRI 223
Query: 159 QSNAKHGQGRDPLALVLAPTRELARQVENE---FKDAAPNLSTICLYGGTPISNQMRELD 215
+++++ G P LVL+PTRELA Q++ E F ++ +S CLYGG P Q+R+L+
Sbjct: 224 RNDSRMG----PTILVLSPTRELATQIQEEAVKFGRSS-RISCTCLYGGAPKGPQLRDLE 278
Query: 216 YGVDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQT 275
G DI V TPGR+ D+L ++L + ++VLDEAD+ML +GF+ + KI+ +P +RQT
Sbjct: 279 RGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQT 338
Query: 276 LMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLAD-GISLYSIASSAYTKAGILAPLI 334
LM++AT P ++ I + L +P ++ +G+ ++ +A+ I+ + + K L ++
Sbjct: 339 LMYTATWPKGVRKIAADLLVNPAQVN-IGNVDELVANKSITQHIEVVAPMEKQRRLEQIL 397
Query: 335 TEHANGGKCIVFTQTKRDADRLSYMMSKSLKCEALHGDISQAQRERTLAGFRNNYFNVLV 394
G K I+F TKR D+L+ +++ A+HGD SQ +R+ L FR+ VLV
Sbjct: 398 RSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLV 457
Query: 395 ATDVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
ATDVA+RGLD+ ++ V++YD PN E +VHR
Sbjct: 458 ATDVAARGLDVKDIRAVVNYDFPNGVEDYVHR 489
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/332 (37%), Positives = 200/332 (60%), Gaps = 12/332 (3%)
Query: 101 GISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKI--I 158
G E++ + G + PIQ AM+G+D+V A+TG+GKTL + IP + I
Sbjct: 164 GFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRI 223
Query: 159 QSNAKHGQGRDPLALVLAPTRELARQVENE---FKDAAPNLSTICLYGGTPISNQMRELD 215
+++++ G P LVL+PTRELA Q++ E F ++ +S CLYGG P Q+R+L+
Sbjct: 224 RNDSRMG----PTILVLSPTRELATQIQEEAVKFGRSS-RISCTCLYGGAPKGPQLRDLE 278
Query: 216 YGVDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQT 275
G DI V TPGR+ D+L ++L + ++VLDEAD+ML +GF+ + KI+ +P +RQT
Sbjct: 279 RGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQT 338
Query: 276 LMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLAD-GISLYSIASSAYTKAGILAPLI 334
LM++AT P ++ I + L +P ++ +G+ ++ +A+ I+ + + K L ++
Sbjct: 339 LMYTATWPKGVRKIAADLLVNPAQVN-IGNVDELVANKSITQHIEVVAPMEKQRRLEQIL 397
Query: 335 TEHANGGKCIVFTQTKRDADRLSYMMSKSLKCEALHGDISQAQRERTLAGFRNNYFNVLV 394
G K I+F TKR D+L+ +++ A+HGD SQ +R+ L FR+ VLV
Sbjct: 398 RSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLV 457
Query: 395 ATDVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
ATDVA+RGLD+ ++ V++YD PN E +VHR
Sbjct: 458 ATDVAARGLDVKDIRAVVNYDFPNGVEDYVHR 489
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/332 (37%), Positives = 200/332 (60%), Gaps = 12/332 (3%)
Query: 101 GISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKI--I 158
G E++ + G + PIQ AM+G+D+V A+TG+GKTL + IP + I
Sbjct: 164 GFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRI 223
Query: 159 QSNAKHGQGRDPLALVLAPTRELARQVENE---FKDAAPNLSTICLYGGTPISNQMRELD 215
+++++ G P LVL+PTRELA Q++ E F ++ +S CLYGG P Q+R+L+
Sbjct: 224 RNDSRMG----PTILVLSPTRELATQIQEEAVKFGRSS-RISCTCLYGGAPKGPQLRDLE 278
Query: 216 YGVDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQT 275
G DI V TPGR+ D+L ++L + ++VLDEAD+ML +GF+ + KI+ +P +RQT
Sbjct: 279 RGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQT 338
Query: 276 LMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLAD-GISLYSIASSAYTKAGILAPLI 334
LM++AT P ++ I + L +P ++ +G+ ++ +A+ I+ + + K L ++
Sbjct: 339 LMYTATWPKGVRKIAADLLVNPAQVN-IGNVDELVANKSITQHIEVVAPMEKQRRLEQIL 397
Query: 335 TEHANGGKCIVFTQTKRDADRLSYMMSKSLKCEALHGDISQAQRERTLAGFRNNYFNVLV 394
G K I+F TKR D+L+ +++ A+HGD SQ +R+ L FR+ VLV
Sbjct: 398 RSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLV 457
Query: 395 ATDVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
ATDVA+RGLD+ ++ V++YD PN E +VHR
Sbjct: 458 ATDVAARGLDVKDIRAVVNYDFPNGVEDYVHR 489
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/332 (37%), Positives = 200/332 (60%), Gaps = 12/332 (3%)
Query: 101 GISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKI--I 158
G E++ + G + PIQ AM+G+D+V A+TG+GKTL + IP + I
Sbjct: 164 GFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRI 223
Query: 159 QSNAKHGQGRDPLALVLAPTRELARQVENE---FKDAAPNLSTICLYGGTPISNQMRELD 215
+++++ G P LVL+PTRELA Q++ E F ++ +S CLYGG P Q+R+L+
Sbjct: 224 RNDSRMG----PTILVLSPTRELATQIQEEAVKFGRSS-RISCTCLYGGAPKGPQLRDLE 278
Query: 216 YGVDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQT 275
G DI V TPGR+ D+L ++L + ++VLDEAD+ML +GF+ + KI+ +P +RQT
Sbjct: 279 RGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQT 338
Query: 276 LMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLAD-GISLYSIASSAYTKAGILAPLI 334
LM++AT P ++ I + L +P ++ +G+ ++ +A+ I+ + + K L ++
Sbjct: 339 LMYTATWPKGVRKIAADLLVNPAQVN-IGNVDELVANKSITQHIEVVAPMEKQRRLEQIL 397
Query: 335 TEHANGGKCIVFTQTKRDADRLSYMMSKSLKCEALHGDISQAQRERTLAGFRNNYFNVLV 394
G K I+F TKR D+L+ +++ A+HGD SQ +R+ L FR+ VLV
Sbjct: 398 RSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLV 457
Query: 395 ATDVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
ATDVA+RGLD+ ++ V++YD PN E +VHR
Sbjct: 458 ATDVAARGLDVKDIRAVVNYDFPNGVEDYVHR 489
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 215 bits (547), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 196/327 (59%), Gaps = 18/327 (5%)
Query: 113 KGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQSNAKHGQGR---D 169
K K PIQ + G+D++G A+TG+GKTLAFGIP + +++ N K G G +
Sbjct: 132 KTFEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVN 191
Query: 170 PLALVLAPTRELARQVENEFKDAAP--NLSTICLYGGTPISNQMRELDYGVDIAVGTPGR 227
P LVL+PTRELA Q+ + ++A L +IC+YGG+ Q+ + GVDI +GTPGR
Sbjct: 192 PTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGR 251
Query: 228 IIDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQTLMFSATMPPEIK 287
+ DL+ L L+ V FVVLDEAD+ML +GF+E V ILS RQ +MFSAT P ++
Sbjct: 252 LRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNKVRQMVMFSATWPLDVH 311
Query: 288 NIIRNYLN-SPL-----TIDLVGDSNQKLADGISLYSIASSAYTKAGILAPLITEH-ANG 340
+ + +++ +P+ ++DL + D + + + ++A L H +
Sbjct: 312 KLAQEFMDPNPIKVIIGSVDLAANH-----DVMQIIEVLDERARDQRLIALLEKYHKSQK 366
Query: 341 GKCIVFTQTKRDADRLS-YMMSKSLKCEALHGDISQAQRERTLAGFRNNYFNVLVATDVA 399
+ +VF K +A+RL ++ + K ++HG+ +Q++R R+L+ F+ +LVATDVA
Sbjct: 367 NRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVA 426
Query: 400 SRGLDIPNVDLVIHYDPPNNSEIFVHR 426
+RGLDIP+V++VI+Y P +E +VHR
Sbjct: 427 ARGLDIPDVEVVINYTFPLTTEDYVHR 453
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 206/356 (57%), Gaps = 22/356 (6%)
Query: 61 NFHSSLVSPSAQPALDHD---YAHENDGFTANSSDEGLEIAK-LGISQE------IVDAL 110
NF+ + SP+ Q + D Y E D S EG ++ K + + Q+ I++A+
Sbjct: 128 NFY--VESPTVQAMTEQDVAMYRTERD-----ISVEGRDVPKPMKMFQDANFPDNILEAI 180
Query: 111 AKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQSNAKHGQGRDP 170
AK G + PIQ A+KG+D++G A TG+GKTLA+ +P L + + + GQ P
Sbjct: 181 AKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHV-SAQPRLGQDDGP 239
Query: 171 LALVLAPTRELARQVENEFKDAA--PNLSTICLYGGTPISNQMRELDYGVDIAVGTPGRI 228
+ L+LAPTRELA Q++ E + + + C+YGG P Q+R+L GV+I + TPGR+
Sbjct: 240 IVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRL 299
Query: 229 IDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQTLMFSATMPPEIKN 288
ID+L NL V ++VLDEAD+ML +GF+ + KI+S++ P RQTL++SAT P E++
Sbjct: 300 IDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVET 359
Query: 289 IIRNYLNSPLTIDLVGDSNQKLADGISLYSIASSAYTKAGILAPLITEHANGGKCIVFTQ 348
+ R +L P ++G ++ K I+ K L L+ + +G K ++F +
Sbjct: 360 LARQFLRDPYKA-IIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVE 418
Query: 349 TKRDADRLSYMMS-KSLKCEALHGDISQAQRERTLAGFRNNYFNVLVATDVASRGL 403
TKR D+++ + A+HGD +Q++R+R LA F++ ++ ATDVA+RGL
Sbjct: 419 TKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGL 474
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 126/328 (38%), Positives = 202/328 (61%), Gaps = 21/328 (6%)
Query: 117 KLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQ-SNAKHGQGRD---PLA 172
K P+QR + ++G+D++ A+TG+GKT AF PI+ I++ + + +G PLA
Sbjct: 181 KPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLA 240
Query: 173 LVLAPTRELARQVENEFKDAA--PNLSTICLYGGTPISNQMRELDYGVDIAVGTPGRIID 230
++L+PTRELA Q+ +E K + + + YGGTPI+ Q+REL+ GVDI V TPGR+ D
Sbjct: 241 VILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELERGVDILVATPGRLND 300
Query: 231 LLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSR--LPPQ--RQTLMFSATMPPEI 286
LL R +++ ++F+ LDEAD+ML +GF+ + KI+ + +PP+ RQTL+FSAT P EI
Sbjct: 301 LLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREI 360
Query: 287 KNIIRNYLNSP--LTIDLVGDSNQKLADGISLYSIASSAYTKAGILAPLITEHANG--GK 342
+ + ++L + L + VG S + + + ++ ++ L + NG GK
Sbjct: 361 QRLAADFLANYIFLAVGRVGSSTDLIVQRVEF---VLDSDKRSHLMDLLHAQRENGIQGK 417
Query: 343 ---CIVFTQTKRDADRL-SYMMSKSLKCEALHGDISQAQRERTLAGFRNNYFNVLVATDV 398
+VF +TKR AD L +++ ++HGD +Q +RE L F++ +LVATDV
Sbjct: 418 QALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVALKAFKSGRTPILVATDV 477
Query: 399 ASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
A+RGLDIP+V V+++D PN+ + +VHR
Sbjct: 478 AARGLDIPHVAHVVNFDLPNDIDDYVHR 505
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 212 bits (539), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 124/328 (37%), Positives = 197/328 (60%), Gaps = 21/328 (6%)
Query: 117 KLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQSN----AKHGQGRDPLA 172
K P+QR + G+D++ A+TG+GKT AF PI+ I++ + +G PLA
Sbjct: 168 KPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLA 227
Query: 173 LVLAPTRELARQVENEFKDAA--PNLSTICLYGGTPISNQMRELDYGVDIAVGTPGRIID 230
++L+PTRELA Q+ +E + + + + YGGTP++ Q+REL+ GVDI V TPGR+ D
Sbjct: 228 VILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLND 287
Query: 231 LLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSR--LPPQ--RQTLMFSATMPPEI 286
LL RG ++L V+F+ LDEAD+ML +GF+ + KI+ + +PP RQT++FSAT P EI
Sbjct: 288 LLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREI 347
Query: 287 KNIIRNYLNSP--LTIDLVGDSNQKLADGISLYSIASSAYTKAGILAPLITEHANGGK-- 342
+ + ++L++ L + VG S + + + ++ ++ L + NG +
Sbjct: 348 QRLASDFLSNYIFLAVGRVGSSTDLI---VQRVEFVHDSDKRSHLMDLLHAQRENGNQGK 404
Query: 343 ---CIVFTQTKRDADRL-SYMMSKSLKCEALHGDISQAQRERTLAGFRNNYFNVLVATDV 398
+VF +TK+ AD L +++ +HGD SQ +RE L F+ +LVATDV
Sbjct: 405 QALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDV 464
Query: 399 ASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
A+RGLDIP+V V+++D PN+ + +VHR
Sbjct: 465 AARGLDIPHVAHVVNFDLPNDIDDYVHR 492
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/347 (37%), Positives = 191/347 (55%), Gaps = 25/347 (7%)
Query: 102 ISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKI--IQ 159
++ E++ A+ + G K PIQ A + ++ +D++G A TG+GKT AF +P+L I +
Sbjct: 320 LTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLP 379
Query: 160 SNAKHGQGRDPLALVLAPTRELARQVENEFKDAAPNL--STICLYGGTPISNQMRELDYG 217
++ + P A+V+APTRELA+Q+E E A L + GG I Q ++ G
Sbjct: 380 PMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQG 439
Query: 218 VDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQ----- 272
+I + TPGR+ID L R LN +VVLDEAD+M+ +GF+ V +L +P
Sbjct: 440 CEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPE 499
Query: 273 ------------RQTLMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADGISLYSIA 320
R T MFSATMPP ++ + R YL +P+ + +G + K D IS + I
Sbjct: 500 NEEEELDEKKIYRTTYMFSATMPPGVERLARKYLRNPVVV-TIGTAG-KTTDLISQHVIM 557
Query: 321 SSAYTKAGILAPLITEHANGGKCIVFTQTKRDADRLSYMMSKS-LKCEALHGDISQAQRE 379
K L L+ E IVF TK++ D ++ + K+ + LHG SQ QRE
Sbjct: 558 MKESEKFFRLQKLLDELGEKT-AIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQRE 616
Query: 380 RTLAGFRNNYFNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
+L GFR +NVLVATDV RG+DIP+V VI+YD P + E++ HR
Sbjct: 617 ISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHR 663
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 124/332 (37%), Positives = 191/332 (57%), Gaps = 11/332 (3%)
Query: 101 GISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKII-Q 159
G S +I+ A+ K+ K IQ L + G+D++G A+TG+GKT AF +P++ I+ Q
Sbjct: 234 GFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQ 293
Query: 160 SNAKHGQGRDPLALVLAPTRELARQVENEFK--DAAPNLSTICLYGGTPISNQMRELDYG 217
+ +G P+ ++ APTRELA Q+ E K A L +YGG Q +EL G
Sbjct: 294 PELQRDEG--PIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAG 351
Query: 218 VDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQTLM 277
+I V TPGR+ID+L +L + ++VLDEAD+M +GF+ V I+ ++ P RQTL+
Sbjct: 352 CEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLL 411
Query: 278 FSATMPPEIKNIIRNYLNSPL--TIDLVGDSNQKLADGISLYSIASSAYTKAGILAPLIT 335
FSATMP +++ + R L+ P+ T+ VG +N+ + +++ I S A +L L
Sbjct: 412 FSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQVVNV--IPSDAEKLPWLLEKL-P 468
Query: 336 EHANGGKCIVFTQTKRDADRLSYMMS-KSLKCEALHGDISQAQRERTLAGFRNNYFNVLV 394
+ G +VF K D + ++ S K ALHGD QA R TL F++ +VL+
Sbjct: 469 GMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLI 528
Query: 395 ATDVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
ATDVA+RGLDI ++ V++YD + ++ VHR
Sbjct: 529 ATDVAARGLDIKSLKTVVNYDIAKDMDMHVHR 560
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 186/320 (58%), Gaps = 13/320 (4%)
Query: 120 PIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQSN----AKHGQGRDPLALVL 175
P+QR + + +D++ A+TG+GKT AF PI+ I++ + + P A++L
Sbjct: 176 PVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVIL 235
Query: 176 APTRELARQVENEFKDAA--PNLSTICLYGGTPISNQMRELDYGVDIAVGTPGRIIDLLN 233
+PTRELA Q+ +E K + + + YGGTPI Q+REL+ G DI V TPGR+ DLL
Sbjct: 236 SPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLE 295
Query: 234 RGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSR--LPPQ--RQTLMFSATMPPEIKNI 289
R +++ ++F+ LDEAD+ML +GF+ + KI+ + +PP+ RQT++FSAT P +I+ +
Sbjct: 296 RARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRL 355
Query: 290 IRNYLNSP--LTIDLVGDSNQKLADGISLYSIASSAYTKAGILAPLITEHANGGKCIVFT 347
+++++ L + VG S + + + +L +VF
Sbjct: 356 AADFMSNYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFV 415
Query: 348 QTKRDADRL-SYMMSKSLKCEALHGDISQAQRERTLAGFRNNYFNVLVATDVASRGLDIP 406
+TKR AD L +++ ++HGD +Q +RE L F+ +LVATDVA+RGLDIP
Sbjct: 416 ETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIP 475
Query: 407 NVDLVIHYDPPNNSEIFVHR 426
+V V+++D PN+ + +VHR
Sbjct: 476 HVAHVVNFDLPNDIDDYVHR 495
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 186/320 (58%), Gaps = 13/320 (4%)
Query: 120 PIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQSN----AKHGQGRDPLALVL 175
P+QR + + +D++ A+TG+GKT AF PI+ I++ + + P A++L
Sbjct: 176 PVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVIL 235
Query: 176 APTRELARQVENEFKDAA--PNLSTICLYGGTPISNQMRELDYGVDIAVGTPGRIIDLLN 233
+PTRELA Q+ +E K + + + YGGTPI Q+REL+ G DI V TPGR+ DLL
Sbjct: 236 SPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLE 295
Query: 234 RGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSR--LPPQ--RQTLMFSATMPPEIKNI 289
R +++ ++F+ LDEAD+ML +GF+ + KI+ + +PP+ RQT++FSAT P +I+ +
Sbjct: 296 RARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRL 355
Query: 290 IRNYLNSP--LTIDLVGDSNQKLADGISLYSIASSAYTKAGILAPLITEHANGGKCIVFT 347
+++++ L + VG S + + + +L +VF
Sbjct: 356 AADFMSNYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFV 415
Query: 348 QTKRDADRL-SYMMSKSLKCEALHGDISQAQRERTLAGFRNNYFNVLVATDVASRGLDIP 406
+TKR AD L +++ ++HGD +Q +RE L F+ +LVATDVA+RGLDIP
Sbjct: 416 ETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIP 475
Query: 407 NVDLVIHYDPPNNSEIFVHR 426
+V V+++D PN+ + +VHR
Sbjct: 476 HVAHVVNFDLPNDIDDYVHR 495
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 186/320 (58%), Gaps = 13/320 (4%)
Query: 120 PIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQSN----AKHGQGRDPLALVL 175
P+QR + + +D++ A+TG+GKT AF PI+ I++ + + P A++L
Sbjct: 176 PVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVIL 235
Query: 176 APTRELARQVENEFKDAA--PNLSTICLYGGTPISNQMRELDYGVDIAVGTPGRIIDLLN 233
+PTRELA Q+ +E K + + + YGGTPI Q+REL+ G DI V TPGR+ DLL
Sbjct: 236 SPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLE 295
Query: 234 RGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSR--LPPQ--RQTLMFSATMPPEIKNI 289
R +++ ++F+ LDEAD+ML +GF+ + KI+ + +PP+ RQT++FSAT P +I+ +
Sbjct: 296 RARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRL 355
Query: 290 IRNYLNSP--LTIDLVGDSNQKLADGISLYSIASSAYTKAGILAPLITEHANGGKCIVFT 347
+++++ L + VG S + + + +L +VF
Sbjct: 356 AADFMSNYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFV 415
Query: 348 QTKRDADRL-SYMMSKSLKCEALHGDISQAQRERTLAGFRNNYFNVLVATDVASRGLDIP 406
+TKR AD L +++ ++HGD +Q +RE L F+ +LVATDVA+RGLDIP
Sbjct: 416 ETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIP 475
Query: 407 NVDLVIHYDPPNNSEIFVHR 426
+V V+++D PN+ + +VHR
Sbjct: 476 HVAHVVNFDLPNDIDDYVHR 495
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 120/334 (35%), Positives = 188/334 (56%), Gaps = 19/334 (5%)
Query: 106 IVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQSNAKH- 164
++D L +KGI + PIQ L + G+DM+G A TG+GKTL F +P++ +Q
Sbjct: 157 VLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMP 216
Query: 165 -GQGRDPLALVLAPTRELARQ---VENEF-----KDAAPNLSTICLYGGTPISNQMRELD 215
G P+ L++ P+RELARQ V +F + P L ++ GG + +Q+ +
Sbjct: 217 IAAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVK 276
Query: 216 YGVDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQT 275
GV I V TPGR+ D+L + ++L+A +++ LDEAD+++ +GF++D+ ++ QRQT
Sbjct: 277 RGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQT 336
Query: 276 LMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADGISLYSIASSAYTK--AGILAPL 333
L+FSATMP +I+ R+ L P+T+ N A +L I Y K A I+ L
Sbjct: 337 LLFSATMPTKIQIFARSALVKPVTV------NVGRAGAANLDVIQEVEYVKQEAKIVYLL 390
Query: 334 ITEHANGGKCIVFTQTKRDADRL-SYMMSKSLKCEALHGDISQAQRERTLAGFRNNYFNV 392
++F + K D D + Y++ K ++ A+HG Q RE ++ F+ +V
Sbjct: 391 ECLQKTSPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAGKKDV 450
Query: 393 LVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
LVATDVAS+GLD P++ VI+YD P E +VHR
Sbjct: 451 LVATDVASKGLDFPDIQHVINYDMPAEIENYVHR 484
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 116/336 (34%), Positives = 192/336 (57%), Gaps = 42/336 (12%)
Query: 99 KLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKII 158
+ G++ +I+D L K K PIQ L M G+D +G A+TG+GKTL F +P+L I
Sbjct: 400 QTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIK 459
Query: 159 -QSNAKHGQGRDPLALVLAPTRELARQVENEFKDAAPNLSTICL--YGGTPISNQMRELD 215
Q + G G P+ LV+APTREL +Q+ ++ + + L IC+ YGG+ ++ Q+ EL
Sbjct: 460 DQPPVEAGDG--PIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELK 517
Query: 216 YGVDIAVGTPGRIIDLLNRGS---LNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQ 272
G +I V TPGR+ID+L S NL V ++V+DEAD+M +GF+ + +I+ + P
Sbjct: 518 RGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPD 577
Query: 273 RQTLMFSATMPPEIKNIIRNYLNSPLTIDLVGDS--NQKLADGISLYSIASSAYTKAGIL 330
RQT++FSAT P +++ + R LN P+ I + G S N+ + + + S +++ L
Sbjct: 578 RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEIRP-ESERFSR---L 633
Query: 331 APLITEHANGGKCIVFTQTKRDADRLSYMMSKSLKCEALHGDISQAQRERTLAGFRNNYF 390
L+ E GK +VF +++ E++++ F+++
Sbjct: 634 LELLGEWYEKGKVLVFVRSQ----------------------------EKSISDFKSDVC 665
Query: 391 NVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
N+L+AT VA+RGLD+ ++LV+++D PN+ E +VHR
Sbjct: 666 NLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHR 701
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 190/335 (56%), Gaps = 11/335 (3%)
Query: 102 ISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQSN 161
+S++I++AL + G P+Q + +D+V A TG+GKTLAF +P ++ I +SN
Sbjct: 23 LSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSN 82
Query: 162 AKHGQGRDPLALVLAPTRELARQ---VENEFKDAAPNLSTICLYGGTPISNQMRELDY-G 217
+ + + ++++PTREL+ Q V F PN++++ L GG + M L+ G
Sbjct: 83 SYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADMNTLEEEG 142
Query: 218 VDIAVGTPGRIIDLLNRGS-LNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQTL 276
++ +GTPGR+ D++ R L+ ++ ++LDEAD++L +GFQ+ V I+SRLP QR+T
Sbjct: 143 ANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTG 202
Query: 277 MFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADGISLYSIASSAYTKAGILAPLITE 336
+FSAT + ++ + L + + + +S K + G+ + A K+ L L+ E
Sbjct: 203 LFSATQTQAVADLAKAGLRNAMEVISGAESKSKTSSGLYCEYLKCEADQKSSQLVHLLIE 262
Query: 337 HANGGKCIVFTQTKRDADRLSYMMSK-----SLKCEALHGDISQAQRERTLAGFRNNYFN 391
+ N K +VF T D ++SK S+ + HG + Q R+ LA F
Sbjct: 263 NKNK-KLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKGRDTALASFTEASSG 321
Query: 392 VLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
VL+ TDVA+RGLDIP +D V+ YDPP + ++F+HR
Sbjct: 322 VLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHR 356
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 197/355 (55%), Gaps = 18/355 (5%)
Query: 80 AHENDGFTANSSDEGLE----IAKLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDM 135
A ++D ++D G+E +GI ++++ + + G K IQ+ + P ++G+D+
Sbjct: 17 AMDDDKLVFETTD-GIEPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDV 75
Query: 136 VGRARTGTGKTLAFGIPILDKIIQSNAKHGQGRDPLALVLAPTRELARQVENEFKDAA-- 193
+ +A++GTGKT + + +++ ++++ Q AL+L+PTRELA Q E +
Sbjct: 76 IAQAQSGTGKTSMIALSVC-QVVDTSSREVQ-----ALILSPTRELATQTEKTIQAIGLH 129
Query: 194 PNLSTICLYGGTPISNQMRELDYGVDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQM 253
N+ GG + +R+L++GV + GTPGR+ D++ R SL A++ ++LDE+D+M
Sbjct: 130 ANIQAHACIGGNSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEM 189
Query: 254 LQVGFQEDVEKILSRLPPQRQTLMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADG 313
L GF++ + + LPP Q + SAT+P EI + ++ P+ I LV L +G
Sbjct: 190 LSRGFKDQIYDVYRYLPPDLQVCLVSATLPHEILEMTSKFMTEPVKI-LVKRDELTL-EG 247
Query: 314 ISLYSIA-SSAYTKAGILAPLITEHANGGKCIVFTQTKRDADRLS-YMMSKSLKCEALHG 371
I + +A K L L + + ++F TKR D LS M S + ++HG
Sbjct: 248 IKQFFVAVEKEEWKFDTLCDLY-DTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHG 306
Query: 372 DISQAQRERTLAGFRNNYFNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
D+ Q +R+ + FR+ VL+ TDV +RG+D+ V LVI+YD PNN E+++HR
Sbjct: 307 DMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHR 361
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 207/381 (54%), Gaps = 15/381 (3%)
Query: 97 IAKLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDK 156
A+LG+ +E+V A + G IQ L A++G+D++G A+TG+GKT AF IPIL
Sbjct: 11 FAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQA 70
Query: 157 IIQ----SNAKHGQGRDP--LALVLAPTRELARQVENEFKDAAPNLSTIC--LYGGTPIS 208
+++ S K G+ DP A VL+PTRELA Q+ +F+ ++S C L GG
Sbjct: 71 LLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRM 130
Query: 209 NQMRELDYGVDIAVGTPGRIID-LLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILS 267
Q L + V TPGR+ D + + +L +++++VLDEAD++L F++ + +IL
Sbjct: 131 QQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILE 190
Query: 268 RLPPQRQTLMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADGISLYSIASSAYTKA 327
+P +R+T +FSATM +++ + R L +P+ I+ S D + +A K
Sbjct: 191 EIPLERKTFLFSATMTKKVRKLQRACLRNPVKIE--AASKYSTVDTLKQQYRFVAAKYKD 248
Query: 328 GILAPLITEHANGGKCIVFTQTKRDADRLSYMMSKSLKCEAL--HGDISQAQRERTLAGF 385
L +++E ++FT+T D R ++ +SL A+ G ++Q++R L F
Sbjct: 249 CYLVYILSEMPES-TSMIFTRTC-DGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKF 306
Query: 386 RNNYFNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHRSXXXXXXXXXXXXILVYTE 445
+ N+LV TDVASRGLDIP+VD+VI+YD P NS+ ++HR I + +
Sbjct: 307 KAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQ 366
Query: 446 VQSRAISTIERDVGCKFTELP 466
+ IE+ +G K E P
Sbjct: 367 YELEWYIQIEKLIGKKLPEYP 387
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 118/330 (35%), Positives = 181/330 (54%), Gaps = 19/330 (5%)
Query: 110 LAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQSNAKH--GQG 167
L KGI PIQ L + G+DM+G A TG+GKTL F +P++ +Q G
Sbjct: 112 LKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAG 171
Query: 168 RDPLALVLAPTRELARQ--------VENEFKDAAPNLSTICLYGGTPISNQMRELDYGVD 219
P+ALV+ P+RELA+Q V + +D P L ++ GG + +Q+ + GV
Sbjct: 172 EGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVH 231
Query: 220 IAVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQTLMFS 279
I V TPGR+ D+L + ++L+A + + LDEAD+++ +GF++D+ + QRQTL+FS
Sbjct: 232 IVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFS 291
Query: 280 ATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADGISLYSIASSAYTK--AGILAPLITEH 337
ATMP +I+ + L P+T+ N A +L I Y K A I+ L
Sbjct: 292 ATMPAKIQIFATSALVKPVTV------NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQ 345
Query: 338 ANGGKCIVFTQTKRDADRL-SYMMSKSLKCEALHGDISQAQRERTLAGFRNNYFNVLVAT 396
++F + K D D + Y++ K ++ A+HG Q R+ ++ F+ +VLVAT
Sbjct: 346 KTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVAT 405
Query: 397 DVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
DVAS+GLD P++ VI+YD P E +VHR
Sbjct: 406 DVASKGLDFPDIQHVINYDMPGEIENYVHR 435
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/397 (31%), Positives = 201/397 (50%), Gaps = 18/397 (4%)
Query: 73 PALDHDYAHENDGFTANSSDEGLEIAKLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKG 132
PA D Y E+ ++ +G E + +E++ + +KG + PIQ + A+ G
Sbjct: 114 PAPDTRYRTED-----VTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTG 168
Query: 133 QDMVGRARTGTGKTLAFGIPILDKIIQSNAKHGQGRDPLALVLAPTRELARQVENEFKDA 192
+D++ RA+ GTGKT AF IP+L+KI Q N A+++ PTRELA Q K+
Sbjct: 169 RDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQ------AVIIVPTRELALQTSQVCKEL 222
Query: 193 APNLS--TICLYGGTPISNQMRELDYGVDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEA 250
+L + GGT + + + L V + VGTPGRI+DL +G L +V+DEA
Sbjct: 223 GKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEA 282
Query: 251 DQMLQVGFQEDVEKILSRLPPQRQTLMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKL 310
D++L FQ VE ++S LP RQ LMFSAT P +K+ +L +P I+L+ + K
Sbjct: 283 DKLLSQEFQPSVEHLISFLPESRQILMFSATFPVTVKDFKDRFLTNPYVINLMDELTLK- 341
Query: 311 ADGISLYSIASSAYTKAGILAPLITEHANGGKCIVFTQTKRDADRLSYMMSK-SLKCEAL 369
GI+ + K L L ++ + I+F + + L+ +++ C +
Sbjct: 342 --GITQFYAFVEERQKIHCLNTLFSK-LQINQSIIFCNSVNRVELLAKKITELGYSCFYI 398
Query: 370 HGDISQAQRERTLAGFRNNYFNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHRSXX 429
H + Q R R FRN LV TD+ +RG+DI V++VI++D P N+E ++HR
Sbjct: 399 HAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGR 458
Query: 430 XXXXXXXXXXILVYTEVQSRAISTIERDVGCKFTELP 466
+ + T + IE+++G + ++P
Sbjct: 459 SGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIP 495
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/397 (31%), Positives = 201/397 (50%), Gaps = 18/397 (4%)
Query: 73 PALDHDYAHENDGFTANSSDEGLEIAKLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKG 132
PA D Y E+ ++ +G E + +E++ + +KG + PIQ + A+ G
Sbjct: 114 PAPDTRYRTED-----VTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTG 168
Query: 133 QDMVGRARTGTGKTLAFGIPILDKIIQSNAKHGQGRDPLALVLAPTRELARQVENEFKDA 192
+D++ RA+ GTGKT AF IP+L+KI Q N A+++ PTRELA Q K+
Sbjct: 169 RDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQ------AVIIVPTRELALQTSQVCKEL 222
Query: 193 APNLS--TICLYGGTPISNQMRELDYGVDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEA 250
+L + GGT + + + L V + VGTPGRI+DL +G L +V+DEA
Sbjct: 223 GKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEA 282
Query: 251 DQMLQVGFQEDVEKILSRLPPQRQTLMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKL 310
D++L FQ VE ++S LP RQ LMFSAT P +K+ +L +P I+L+ + K
Sbjct: 283 DKLLSQEFQPSVEHLISFLPESRQILMFSATFPVTVKDFKDRFLTNPYVINLMDELTLK- 341
Query: 311 ADGISLYSIASSAYTKAGILAPLITEHANGGKCIVFTQTKRDADRLSYMMSK-SLKCEAL 369
GI+ + K L L ++ + I+F + + L+ +++ C +
Sbjct: 342 --GITQFYAFVEERQKIHCLNTLFSK-LQINQSIIFCNSVNRVELLAKKITELGYSCFYI 398
Query: 370 HGDISQAQRERTLAGFRNNYFNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHRSXX 429
H + Q R R FRN LV TD+ +RG+DI V++VI++D P N+E ++HR
Sbjct: 399 HAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGR 458
Query: 430 XXXXXXXXXXILVYTEVQSRAISTIERDVGCKFTELP 466
+ + T + IE+++G + ++P
Sbjct: 459 SGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIP 495
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 201/424 (47%), Gaps = 31/424 (7%)
Query: 63 HSSLVSPSAQPALDHDYAHENDGFTANSSDEGLEIAKLGISQEIVDALAKKGIAKLFPIQ 122
H SL S + L+ D F + D +G+ + ++ + G K IQ
Sbjct: 2 HVSLTRNSMKCELEG-----QDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQ 56
Query: 123 RAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKI----IQSNAKHGQGRDPLALVLAPT 178
+ + P KG D++ +A++GTGKT F +L ++ IQ A LVLAPT
Sbjct: 57 QRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQA----------LVLAPT 106
Query: 179 RELARQVENEFKDAAPNLST---ICLYGGTPISNQMRELDYGVDIAVGTPGRIIDLLNRG 235
RELA+Q+E + L C+ GGT + R L GV + VGTPGR+ D+L R
Sbjct: 107 RELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQ 165
Query: 236 SLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQTLMFSATMPPEIKNIIRNYLN 295
SL + ++ VLDEAD+ML GF++ + I LPP+ Q +FSATMPPE I R +++
Sbjct: 166 SLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMS 225
Query: 296 SPLTIDLVGDSNQKLADGISLYSIASSAYTKAGILAPLITEHANGGKCIVFTQTKRDADR 355
P+ I LV L Y K L L E + ++F T+R D
Sbjct: 226 KPVRI-LVKRDELTLEGIKQFYVNVEKEEWKLETLCDLY-ETLAITQSVIFVNTRRKVDW 283
Query: 356 LS-YMMSKSLKCEALHGDISQAQRERTLAGFRNNYFNVLVATDVASRGLDIPNVDLVIHY 414
L+ M S+ A HGD+ Q R+ + FR+ VL+ TD+ +RG+D+ V LVI++
Sbjct: 284 LTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINF 343
Query: 415 DPPNNSEIFVHRSXXXXXXXXXXXXILVYTEVQSRAISTIERDVGCKFTELPKIDVPSGS 474
D P E ++HR I T R + I+ KF + ++PS
Sbjct: 344 DLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQ-----KFYNVVVEELPSNV 398
Query: 475 VDML 478
D+L
Sbjct: 399 ADLL 402
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 193/345 (55%), Gaps = 20/345 (5%)
Query: 102 ISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQSN 161
+S +I++AL + P+Q A + +D+ A TG+GKTLAF +P+++ + +S
Sbjct: 23 LSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRST 82
Query: 162 AKHGQGRDPLALVLAPTRELARQVEN---EFKDAAPNLSTICLYGGTPISNQMRELDY-G 217
+ + + ++++PTREL+ Q+ N F N++++ L GG + M+ ++ G
Sbjct: 83 SFPPKPHQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEG 142
Query: 218 VDIAVGTPGRIIDLLNRGS-LNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQTL 276
++ +GTPGR+ D++ R L+ ++ ++LDEAD++L++GFQ V I+SRLP QR+T
Sbjct: 143 CNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLPKQRRTG 202
Query: 277 MFSATMPPEIKNIIRNYLNSPLTIDLVGDS---------NQKLADGISLYSIASSAYTKA 327
+FSAT ++ + + L +P+ +++ S N K G+ L + A K+
Sbjct: 203 LFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSKTPSGLHLEYMECEADKKS 262
Query: 328 GILAPLITEHANGGKCIVFTQTKRDADRLSYMMSK-----SLKCEALHGDISQAQRERTL 382
L L+ ++++ K IVF T D ++SK S+ +HGD+ Q R++ L
Sbjct: 263 SQLVDLLIKNSDK-KLIVFFMTCASVDYWGLVLSKIPALKSISLIPIHGDMKQNARDKAL 321
Query: 383 AGFRNNYFNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHRS 427
A F L+ TDVA+RGLDIP +D V+ YDPP + +F HR+
Sbjct: 322 ASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRA 366
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/371 (33%), Positives = 195/371 (52%), Gaps = 13/371 (3%)
Query: 99 KLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKII 158
+L +S+ ++ A G K PIQ A + A+ G+D+ A TG+GKT AF +P L++++
Sbjct: 171 ELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLERLL 230
Query: 159 QSNAKHGQGRDPLALVLAPTRELARQVENEFKDAAPNLSTIC--LYGGTPISNQMRELDY 216
+ R L+L PTRELA Q+ + ++ A C + GG + Q L
Sbjct: 231 FRPKRVFATR---VLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRS 287
Query: 217 GVDIAVGTPGRIID-LLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQT 275
DI V TPGR+ID L N S++L+ + ++LDEAD++LQ GF ++ +++ P +RQT
Sbjct: 288 MPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQT 347
Query: 276 LMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADGISLYSI---ASSAYTKAGILAP 332
++FSATM E+K +++ LN PL L D + + G++ + + + +L
Sbjct: 348 MLFSATMTEEVKELVKLSLNKPLR--LSADPSARRPPGLTEEVVRIRRTREANQEAVLLS 405
Query: 333 LITEHANGGKCIVFTQTKRDADRLSYMMS-KSLKCEALHGDISQAQRERTLAGFRNNYFN 391
L T K I+F+ TK+ A RL + LK LHG+++QAQR +L FR +
Sbjct: 406 LCT-RTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVD 464
Query: 392 VLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHRSXXXXXXXXXXXXILVYTEVQSRAI 451
L+ATDVA+RGLDI V VI+Y P + +VHR + T+ +
Sbjct: 465 FLIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGREGYAVTFVTDSDRSLL 524
Query: 452 STIERDVGCKF 462
I + VG K
Sbjct: 525 KVIAKKVGSKL 535
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/357 (35%), Positives = 179/357 (50%), Gaps = 13/357 (3%)
Query: 114 GIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQSNAKHGQGRDPLAL 173
G K IQ+ + P KG D++ +A++GTGKT F +L ++ S + AL
Sbjct: 60 GFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDISLVQCQ------AL 113
Query: 174 VLAPTRELARQVENEFKDAAPNL---STICLYGGTPISNQMRELDYGVDIAVGTPGRIID 230
VLAPTRELA+Q+E + L + C+ GGT + R L GV + VGTPGR+ D
Sbjct: 114 VLAPTRELAQQIEKVMRALGDYLGVKAQACV-GGTSVREDQRVLQSGVHVVVGTPGRVFD 172
Query: 231 LLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQTLMFSATMPPEIKNII 290
LL R SL +A++ VLDEAD+ML GF++ + I LP + Q +FSATMPPE I
Sbjct: 173 LLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEIT 232
Query: 291 RNYLNSPLTIDLVGDSNQKLADGISLYSIASSAYTKAGILAPLITEHANGGKCIVFTQTK 350
R ++N P+ I LV L Y K L L E + ++F T+
Sbjct: 233 RKFMNKPVRI-LVKRDELTLEGIKQFYVNVDKEEWKLETLCDLY-ETLAITQSVIFVNTR 290
Query: 351 RDADRLS-YMMSKSLKCEALHGDISQAQRERTLAGFRNNYFNVLVATDVASRGLDIPNVD 409
R D L+ M S+ A HGD+ Q R+ + FR+ VL+ TD+ +RG+D+ V
Sbjct: 291 RKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVS 350
Query: 410 LVIHYDPPNNSEIFVHRSXXXXXXXXXXXXILVYTEVQSRAISTIERDVGCKFTELP 466
LVI++D P E ++HR I T R ++ I+R ELP
Sbjct: 351 LVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDERMMADIQRFYNVVVEELP 407
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/404 (32%), Positives = 194/404 (48%), Gaps = 26/404 (6%)
Query: 83 NDGFTANSSDEGLEIAKLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTG 142
D F + D +G+ + ++ + G K IQ+ + P KG D++ +A++G
Sbjct: 27 QDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 86
Query: 143 TGKTLAFGIPILDKI----IQSNAKHGQGRDPLALVLAPTRELARQVENEFKDAAPNLST 198
TGKT F +L ++ IQ A LVLAPTRELA+Q+E + L
Sbjct: 87 TGKTATFCSGVLQQLDFSLIQCQA----------LVLAPTRELAQQIEKVMRALGDYLGV 136
Query: 199 ---ICLYGGTPISNQMRELDYGVDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQ 255
C+ GGT + R L GV + VGTPGR+ D+L R SL + ++ VLDEAD+ML
Sbjct: 137 KVHACV-GGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLS 195
Query: 256 VGFQEDVEKILSRLPPQRQTLMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADGIS 315
GF++ + I LPP+ Q +FSATMPPE I R +++ P+ I LV L
Sbjct: 196 RGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI-LVKRDELTLEGIKQ 254
Query: 316 LYSIASSAYTKAGILAPLITEHANGGKCIVFTQTKRDADRLS-YMMSKSLKCEALHGDIS 374
Y K L L E + ++F T+R D L+ M S+ A HGD+
Sbjct: 255 FYVNVEKEEWKLETLCDLY-ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMD 313
Query: 375 QAQRERTLAGFRNNYFNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHRSXXXXXXX 434
Q R+ + FR+ VL+ TD+ +RG+D+ V LVI++D P E ++HR
Sbjct: 314 QNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFG 373
Query: 435 XXXXXILVYTEVQSRAISTIERDVGCKFTELPKIDVPSGSVDML 478
I T R + I+ KF + ++PS D+L
Sbjct: 374 RKGVAINFVTRDDERMLFDIQ-----KFYNVVVEELPSNVADLL 412
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 178/352 (50%), Gaps = 21/352 (5%)
Query: 83 NDGFTANSSDEGLEIAKLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTG 142
D F + D +G+ + ++ + G K IQ+ + P KG D++ +A++G
Sbjct: 27 QDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 86
Query: 143 TGKTLAFGIPILDKI----IQSNAKHGQGRDPLALVLAPTRELARQVENEFKDAAPNLST 198
TGKT F +L ++ IQ A LVLAPTRELA+Q+E + L
Sbjct: 87 TGKTATFCSGVLQQLDFSLIQCQA----------LVLAPTRELAQQIEKVMRALGDYLGV 136
Query: 199 ---ICLYGGTPISNQMRELDYGVDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQ 255
C+ GGT + R L GV + VGTPGR+ D+L R SL + ++ VLDEAD+ML
Sbjct: 137 KVHACV-GGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLS 195
Query: 256 VGFQEDVEKILSRLPPQRQTLMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADGIS 315
GF++ + I LPP+ Q +FSATMPPE I R +++ P+ I LV L
Sbjct: 196 RGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI-LVKRDELTLEGIKQ 254
Query: 316 LYSIASSAYTKAGILAPLITEHANGGKCIVFTQTKRDADRLS-YMMSKSLKCEALHGDIS 374
Y K L L E + ++F T+R D L+ M S+ A HGD+
Sbjct: 255 FYVNVEKEEWKLETLCDLY-ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMD 313
Query: 375 QAQRERTLAGFRNNYFNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
Q R+ + FR+ VL+ TD+ +RG+D+ V LVI++D P E ++HR
Sbjct: 314 QNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHR 365
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 129/375 (34%), Positives = 192/375 (51%), Gaps = 24/375 (6%)
Query: 100 LGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQ 159
LG+++ V+ + G+ K P+Q + + G+D++G A+TG+GKT AF +PIL
Sbjct: 63 LGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPIL----- 117
Query: 160 SNAKHGQGRDP---LALVLAPTRELARQVENEFKDAAPNLSTIC--LYGGTPISNQMREL 214
H DP ALV+ PTRELA Q+ +FK L+ C + GG + Q L
Sbjct: 118 ----HRLAEDPYGVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSL 173
Query: 215 DYGVDIAVGTPGRIIDLLNRGS---LNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPP 271
I + TPGRI LL + +F+VLDEAD++L VGFQ+++ I LP
Sbjct: 174 VSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPK 233
Query: 272 QRQTLMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADGISLYSIASSAYTKAGILA 331
RQTL+FSATM ++ ++ + N + K D ++ I K L
Sbjct: 234 SRQTLLFSATMTSNLQALLEHSSNKAYFYE--AYEGLKTVDTLTQQFIFEDKDAKELYLV 291
Query: 332 PLITEHANGG--KCIVFTQTKRDADRLSYMMSKSLKCE--ALHGDISQAQRERTLAGFRN 387
++++ + G ++F T R RLS M+ + L+ E A+H SQ+ R L+ F++
Sbjct: 292 HILSQMEDKGIRSAMIFVSTCRTCQRLSLMLDE-LEVENIAMHSLNSQSMRLSALSKFKS 350
Query: 388 NYFNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHRSXXXXXXXXXXXXILVYTEVQ 447
+L+ATDVASRGLDIP VDLVI+YD P + +VHR + + TE
Sbjct: 351 GKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETD 410
Query: 448 SRAISTIERDVGCKF 462
+ I IE +VG K
Sbjct: 411 VKLIHKIEEEVGKKM 425
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 184/332 (55%), Gaps = 11/332 (3%)
Query: 100 LGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQ 159
L + + +A+ KKG PIQR + + G D+V ARTG+GKT AF IP+L+K+ Q
Sbjct: 33 LNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEKLKQ 92
Query: 160 SNAKHGQGRDPLALVLAPTRELARQVENEFKDAAP--NLSTICLYGGTPISNQMRELDYG 217
+ G AL+L+PTR+LA Q K+ +L L GG + +Q EL G
Sbjct: 93 HVPQGG----VRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKG 148
Query: 218 VDIAVGTPGRIIDLLNR-GSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQTL 276
D+ + TPGR++ LL+ + L V++VV DEAD + +GF E + +IL++L RQTL
Sbjct: 149 PDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQTL 208
Query: 277 MFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADGISLYSIASSAYTKAGILAPLITE 336
+FSAT+P + + L P + L D K++ + L + K L L+ E
Sbjct: 209 LFSATLPSALAEFAKAGLREPQLVRL--DVENKISPDLKLSFLTVRPEEKYSALLYLVRE 266
Query: 337 H-ANGGKCIVFTQTKRDADRLSYMMS-KSLKCEALHGDISQAQRERTLAGFRNNYFNVLV 394
H ++ + ++F TK + ++ + ++++ +GD+ Q R+ ++ FR +L+
Sbjct: 267 HISSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKIHVSRFRARKTMLLI 326
Query: 395 ATDVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
TD+A+RG+DIP +D VI++D P +IFVHR
Sbjct: 327 VTDIAARGIDIPLLDNVINWDFPPRPKIFVHR 358
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/371 (31%), Positives = 190/371 (51%), Gaps = 13/371 (3%)
Query: 100 LGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQ 159
+G++ +++ + G K IQ+ L P +KG+D++ +A++GTGKT I + +I+
Sbjct: 27 MGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISVC-QIVN 85
Query: 160 SNAKHGQGRDPLALVLAPTRELARQVENEFK--DAAPNLSTICLYGGTPISNQMRELDYG 217
+++ Q LVL+P+RELA Q E + A N+ GG I +++L+ G
Sbjct: 86 ISSRKVQ-----VLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIKKLERG 140
Query: 218 VDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQTLM 277
V GTPGR+ D++ RGSL AV+ +VLDE+D+ML G ++ + + LP Q +
Sbjct: 141 VHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPHDIQVCL 200
Query: 278 FSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADGISLYSI-ASSAYTKAGILAPLITE 336
SAT+P EI + ++ P+ I LV L +GI Y + K L L
Sbjct: 201 ISATLPQEILEMTEKFMTDPVRI-LVKPDELTL-EGIKQYYVDVDKEEWKFDTLCDLYG- 257
Query: 337 HANGGKCIVFTQTKRDADRLS-YMMSKSLKCEALHGDISQAQRERTLAGFRNNYFNVLVA 395
+ I+F T++ D L+ M S + ++HGD Q +R+ + FR+ VL+A
Sbjct: 258 RLTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLIA 317
Query: 396 TDVASRGLDIPNVDLVIHYDPPNNSEIFVHRSXXXXXXXXXXXXILVYTEVQSRAISTIE 455
+DV +RG+D+ V VI+YD PNN E+++HR I + + IE
Sbjct: 318 SDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDMKDLKDIE 377
Query: 456 RDVGCKFTELP 466
R G K E+P
Sbjct: 378 RHYGTKIREMP 388
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/374 (33%), Positives = 184/374 (49%), Gaps = 26/374 (6%)
Query: 113 KGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKI----IQSNAKHGQGR 168
+G K IQ+ + P KG D++ +A++GTGKT F +L ++ IQ A
Sbjct: 52 RGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQA------ 105
Query: 169 DPLALVLAPTRELARQVENEFKDAAPNLST---ICLYGGTPISNQMRELDYGVDIAVGTP 225
LVLAPTRELA+Q+E + L C+ GGT + R L GV + VGTP
Sbjct: 106 ----LVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILQAGVHVVVGTP 160
Query: 226 GRIIDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQTLMFSATMPPE 285
GR+ D+L R SL + ++ VLDEAD+ML GF++ + I LPP+ Q +FSATMPPE
Sbjct: 161 GRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPE 220
Query: 286 IKNIIRNYLNSPLTIDLVGDSNQKLADGISLYSIASSAYTKAGILAPLITEHANGGKCIV 345
I R +++ P+ I LV L Y K L L E + ++
Sbjct: 221 ALEITRKFMSKPVRI-LVKRDELTLEGIKQFYVNVEKEEWKLETLCDLY-ETLAITQSVI 278
Query: 346 FTQTKRDADRLS-YMMSKSLKCEALHGDISQAQRERTLAGFRNNYFNVLVATDVASRGLD 404
F T+R D L+ M S+ A HGD+ Q R+ + FR+ VL+ TD+ +RG+D
Sbjct: 279 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 338
Query: 405 IPNVDLVIHYDPPNNSEIFVHRSXXXXXXXXXXXXILVYTEVQSRAISTIERDVGCKFTE 464
+ V LVI++D P E ++HR I T R + I+ KF
Sbjct: 339 VQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQ-----KFYN 393
Query: 465 LPKIDVPSGSVDML 478
+ ++PS D+L
Sbjct: 394 VVVEELPSNVADLL 407
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 172/330 (52%), Gaps = 11/330 (3%)
Query: 100 LGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQ 159
+G+ + ++ + G K IQ+ + P KG D++ +A++GTGKT F +L ++
Sbjct: 44 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDY 103
Query: 160 SNAKHGQGRDPLALVLAPTRELARQVENEFKDAA--PNLSTICLYGGTPISNQMRELDYG 217
+ + ALVLAPTRELA+Q+E + + GGT + R L G
Sbjct: 104 ALLQCQ------ALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAG 157
Query: 218 VDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQTLM 277
V + VGTPGR+ D+L R SL + ++ VLDEAD+ML GF++ + I LPP+ Q +
Sbjct: 158 VHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGV 217
Query: 278 FSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADGISLYSIASSAYTKAGILAPLITEH 337
FSATMPPE I R +++ P+ I LV L Y K L L E
Sbjct: 218 FSATMPPEALEITRKFMSKPVRI-LVKRDELTLEGIKQFYVNVEKEDWKLETLCDLY-ET 275
Query: 338 ANGGKCIVFTQTKRDADRLS-YMMSKSLKCEALHGDISQAQRERTLAGFRNNYFNVLVAT 396
+ ++F T+R D L+ M S+ A HGD+ Q R+ + FR+ VL+ T
Sbjct: 276 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 335
Query: 397 DVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
D+ +RG+D+ V LVI++D P E ++HR
Sbjct: 336 DLLARGIDVQQVSLVINFDLPTQPENYLHR 365
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 183/357 (51%), Gaps = 18/357 (5%)
Query: 73 PALDHDYAHENDGFTANSSDEGLEIAKLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKG 132
P D+ Y E+ ++ +G E + ++++ + +KG K PIQ + A+ G
Sbjct: 137 PPRDNRYQTED-----VTATKGNEFEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTG 191
Query: 133 QDMVGRARTGTGKTLAFGIPILDKIIQSNAKHGQGRDPLALVLAPTRELARQVENEFKDA 192
D++ RA+ GTGKT AF IP L+KI N A++L PTRELA Q K+
Sbjct: 192 SDILARAKNGTGKTGAFCIPTLEKIDPENNVIQ------AVILVPTRELALQTSQVCKEL 245
Query: 193 APNL--STICLYGGTPISNQMRELDYGVDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEA 250
+ L + GGT + + + L V + VGTPGRI+DL +G L +V+DEA
Sbjct: 246 SKYLKIEVMVTTGGTSLRDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCAMLVMDEA 305
Query: 251 DQMLQVGFQEDVEKILSRLPPQRQTLMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKL 310
D++L V FQ +E+++ LP RQ LMFSAT P +K+ YL P I+L+ +Q
Sbjct: 306 DKLLSVEFQPSIEELIQFLPESRQILMFSATFPVTVKSFKDRYLKKPYIINLM---DQLT 362
Query: 311 ADGISLYSIASSAYTKAGILAPLITEHANGGKCIVFTQTKRDADRLSYMMSK-SLKCEAL 369
G++ Y K L L ++ + I+F + + L+ +++ C +
Sbjct: 363 LMGVTQYYAFVEERQKVHCLNTLFSK-LQINQSIIFCNSVNRVELLAKKITELGYSCFYI 421
Query: 370 HGDISQAQRERTLAGFRNNYFNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
H + Q R R FRN LV TD+ +RG+DI V++VI++D P SE ++HR
Sbjct: 422 HAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHR 478
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 166/317 (52%), Gaps = 11/317 (3%)
Query: 113 KGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQSNAKHGQGRDPLA 172
+G K IQ+ + P KG D++ +A++GTGKT F +L ++ + + A
Sbjct: 52 RGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQ------A 105
Query: 173 LVLAPTRELARQVENEFKDAA--PNLSTICLYGGTPISNQMRELDYGVDIAVGTPGRIID 230
LVLAPTRELA+Q+E + + GGT + R L GV + VGTPGR+ D
Sbjct: 106 LVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFD 165
Query: 231 LLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQTLMFSATMPPEIKNII 290
+L R SL + ++ VLDEAD+ML GF++ + I LPP+ Q +FSATMPPE I
Sbjct: 166 MLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEIT 225
Query: 291 RNYLNSPLTIDLVGDSNQKLADGISLYSIASSAYTKAGILAPLITEHANGGKCIVFTQTK 350
R +++ P+ I LV L Y K L L E + ++F T+
Sbjct: 226 RKFMSKPVRI-LVKRDELTLEGIKQFYVNVEKEDWKLETLCDLY-ETLAITQSVIFVNTR 283
Query: 351 RDADRLS-YMMSKSLKCEALHGDISQAQRERTLAGFRNNYFNVLVATDVASRGLDIPNVD 409
R D L+ M S+ A HGD+ Q R+ + FR+ VL+ TD+ +RG+D+ V
Sbjct: 284 RKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVS 343
Query: 410 LVIHYDPPNNSEIFVHR 426
LVI++D P E ++HR
Sbjct: 344 LVINFDLPTQPENYLHR 360
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/340 (32%), Positives = 178/340 (52%), Gaps = 13/340 (3%)
Query: 90 SSDEGLEIAKLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAF 149
++ +G E + ++++ + +KG K PIQ + A+ G D++ RA+ GTGKT AF
Sbjct: 119 TATKGNEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAF 178
Query: 150 GIPILDKIIQSNAKHGQGRDPLALVLAPTRELARQVENEFKDAAP--NLSTICLYGGTPI 207
IP+L+KI +N A++L PTRELA Q K+ + N+ + GGT +
Sbjct: 179 CIPVLEKIDPNNNVIQ------AMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSL 232
Query: 208 SNQMRELDYGVDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILS 267
+ + L V + VGTPGRI+DL +G L +V+DEAD++L FQ +E+++
Sbjct: 233 RDDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQ 292
Query: 268 RLPPQRQTLMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADGISLYSIASSAYTKA 327
LP RQ LMFSAT P +K +L P I+L+ +Q G++ Y K
Sbjct: 293 FLPQNRQFLMFSATFPVTVKAFKDRHLRKPYVINLM---DQLTLMGVTQYYAFVEERQKV 349
Query: 328 GILAPLITEHANGGKCIVFTQTKRDADRLSYMMSK-SLKCEALHGDISQAQRERTLAGFR 386
L L ++ + I+F + + L+ +++ C +H + Q R R FR
Sbjct: 350 HCLNTLFSK-LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFR 408
Query: 387 NNYFNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
N LV TD+ +RG+DI V++VI++D P SE ++HR
Sbjct: 409 NGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHR 448
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/340 (32%), Positives = 178/340 (52%), Gaps = 13/340 (3%)
Query: 90 SSDEGLEIAKLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAF 149
++ +G E + ++++ + +KG K PIQ + A+ G D++ RA+ GTGKT AF
Sbjct: 119 TATKGNEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAF 178
Query: 150 GIPILDKIIQSNAKHGQGRDPLALVLAPTRELARQVENEFKDAAP--NLSTICLYGGTPI 207
IP+L+KI +N A++L PTRELA Q K+ + N+ + GGT +
Sbjct: 179 CIPVLEKIDPNNNVIQ------AMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSL 232
Query: 208 SNQMRELDYGVDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILS 267
+ + L V + VGTPGRI+DL +G L +V+DEAD++L FQ +E+++
Sbjct: 233 RDDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQ 292
Query: 268 RLPPQRQTLMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADGISLYSIASSAYTKA 327
LP RQ LMFSAT P +K +L P I+L+ +Q G++ Y K
Sbjct: 293 FLPQNRQFLMFSATFPVTVKAFKDRHLRKPYVINLM---DQLTLMGVTQYYAFVEERQKV 349
Query: 328 GILAPLITEHANGGKCIVFTQTKRDADRLSYMMSK-SLKCEALHGDISQAQRERTLAGFR 386
L L ++ + I+F + + L+ +++ C +H + Q R R FR
Sbjct: 350 HCLNTLFSK-LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFR 408
Query: 387 NNYFNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
N LV TD+ +RG+DI V++VI++D P SE ++HR
Sbjct: 409 NGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHR 448
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 180/337 (53%), Gaps = 18/337 (5%)
Query: 100 LGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKI-- 157
L +S ++ + G A++ IQ + P M G+D++G ARTG+GKTLAF IP ++ +
Sbjct: 159 LSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVELLYR 218
Query: 158 IQSNAKHGQGRDPLALVLAPTRELARQVENEFKDAAPNLSTIC--LYGGTPISNQMRELD 215
++ ++G G LV+ PTRELA Q K+ S + GG + L
Sbjct: 219 VKFTPRNGTG----VLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEILA 274
Query: 216 YGVDIAVGTPGRIID-LLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQ 274
GV++ V TPGR++D L N ++F+V+DEAD++L+ F+ED++KIL+ LP RQ
Sbjct: 275 KGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKTRQ 334
Query: 275 TLMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADGISL-YSIASSAYTKAGILAPL 333
T +FSAT +++++ R L SP+ ID+ + +G+ Y + SA + L
Sbjct: 335 TSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSA-MRLLFLLTF 393
Query: 334 ITEHANGGKCIVF----TQTKRDADRLSYMMSKSLKCEALHGDISQAQRERTLAGFRNNY 389
+ K +VF TK A+ Y+ C + G I Q +R T F
Sbjct: 394 LKRFQGKKKIMVFFSTCKSTKFHAELFRYI---KFDCLEIRGGIDQNKRTPTFLQFIKAE 450
Query: 390 FNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
+L+ T+VA+RGLD P+VD ++ YDPP+N ++HR
Sbjct: 451 TGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHR 487
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 185/333 (55%), Gaps = 11/333 (3%)
Query: 100 LGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQ 159
L +S++ A+ + G + IQ ++P ++G+D++G ARTG+GKTLAF IP ++ + +
Sbjct: 94 LDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVELLFK 153
Query: 160 S--NAKHGQGRDPLALVLAPTRELARQVENEFKDAAPNLSTIC--LYGGTPISNQMRELD 215
+ ++G G +V+ PTRELA Q +N ++ + S + GG ++ + +
Sbjct: 154 ERFSPRNGTG----VIVICPTRELAIQTKNVAEELLKHHSQTVSMVIGGNNRRSEAQRIA 209
Query: 216 YGVDIAVGTPGRIID-LLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQ 274
G ++ + TPGR++D L N + ++ +V+DEAD++L+ F+ED+ KIL LP RQ
Sbjct: 210 SGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILPKTRQ 269
Query: 275 TLMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLA-DGISLYSIASSAYTKAGILAPL 333
T +FSAT ++K++ R L SP+ +D V D +K+ +G+ + + +L
Sbjct: 270 TALFSATQTSKVKDLARVSLTSPVHVD-VDDGRRKVTNEGLEQGYCVVPSKQRLILLISF 328
Query: 334 ITEHANGGKCIVFTQTKRDADRLSYMMSKSLKCEALHGDISQAQRERTLAGFRNNYFNVL 393
+ ++ N + F+ K M + +HG + Q +R +T F +L
Sbjct: 329 LKKNLNKKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGGMDQNRRTKTFFDFMKAKKGIL 388
Query: 394 VATDVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
+ TDVA+RGLDIP+VD +I YDPP+ ++HR
Sbjct: 389 LCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHR 421
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 166/320 (51%), Gaps = 28/320 (8%)
Query: 130 MKGQDMVGRARTGTGKTLAFGIPILDKI--IQSNAKHGQGRDPLALVLAPTRELARQVEN 187
++ +D++G + TG+GKT AF +P+L I + + Q P ALV+ PTRELA Q+E
Sbjct: 237 LEQRDVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALVMVPTRELAHQIEE 296
Query: 188 EFKDAAPNL--STICLYGGTPISNQMRELDYGVDIAVGTPGRIIDLLNRGSLNLNAVQFV 245
E + L + + G I Q +L G +I + TPGR++D L R + LN ++
Sbjct: 297 ETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVVLNQCNYL 356
Query: 246 VLDEADQMLQVGFQEDVEKILSRLPPQ-----------------RQTLMFSATMPPEIKN 288
VLDEAD+M+ + F+ V ++L +P R T MFSATM ++
Sbjct: 357 VLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKKIYRTTYMFSATMLLSVER 416
Query: 289 IIRNYLNSPLTIDLVGDSNQKLADGISLYSIASSAYTKAGILAPLITEHANGGKCIVFTQ 348
+ R +L +P+ + +G++ + + + I + K L LI + + IVF
Sbjct: 417 LARKFLRNPVVV-TIGETTKFITQQV----IMTKESDKFSRLKKLIDDLGDDKTAIVFVN 471
Query: 349 TKRDADRLSYMMSKSLKCE--ALHGDISQAQRERTLAGFRNNYFNVLVATDVASRGLDIP 406
T+ D + + K +C LH SQ QR+ +L F+ FNVLV TDV RGLDI
Sbjct: 472 TRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRGLDIL 531
Query: 407 NVDLVIHYDPPNNSEIFVHR 426
++ VI+YD PN +++ HR
Sbjct: 532 DLAQVINYDMPNTMDLYTHR 551
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 197/381 (51%), Gaps = 23/381 (6%)
Query: 107 VDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQSNAKHGQ 166
+ A+ G + +Q A L ++G+D++ +A+TGTGKT+AF +P ++ +I+S
Sbjct: 394 LKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRD 453
Query: 167 GRDP--LALVLAPTRELARQVE---NEFKDAAPNLSTICLYGGTPISNQMRELDYG-VDI 220
R P + LV+ PTRELA Q N P++ + GGT + + R + I
Sbjct: 454 SRQPPIIVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQTNPCQI 513
Query: 221 AVGTPGRIIDLLNRGS---LNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQTLM 277
V TPGR+ D + S L V+ +VLDEAD +L +GF+ D+E+I++ +P QRQT +
Sbjct: 514 LVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFL 573
Query: 278 FSATMPPEIKNII-----RNYLNSPLTIDLVGDSNQKLADGISLYSIASSAYTKAGILAP 332
FSAT+P E++ I R++ + G+++QK+ +Y IA S +L
Sbjct: 574 FSATVPEEVRQICHVALKRDHEFINCVQEGSGETHQKVT---QMYMIA-SLDRHFSLLHV 629
Query: 333 LITEHANGG---KCIVFTQTKRDADRLSYMMSK-SLKCEALHGDISQAQRERTLAGFRNN 388
L+ EH K I+F T ++ ++S+ SL +H Q+ R R FR +
Sbjct: 630 LLKEHIADNVDYKVIIFCTTAMVTRLVADLLSQLSLNVREIHSRKPQSYRTRVSDEFRKS 689
Query: 389 YFNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHRSXXXXXXXXXXXXILVYTEVQS 448
+LV +DV++RG+D P+V LV+ P++ E ++HR +L+ +
Sbjct: 690 KAIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLLLAPWEE 749
Query: 449 RAISTIERDVGCKFTELPKID 469
+S++ +D+ + LP ID
Sbjct: 750 YFMSSV-KDLPITKSPLPPID 769
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 213/416 (51%), Gaps = 22/416 (5%)
Query: 69 PSAQPALDHDYAHENDGFTANSSDEGLEIAKLGISQEIVDALAKKGIAKLFPIQRAVLEP 128
P++ L A +D + + + + ++ L + + I DA G + +Q A L
Sbjct: 59 PASTTPLVTQIAKTSDSYLSKTRFDQFPLSPLTL-KGIEDA----GFKTMTVVQEATLPL 113
Query: 129 AMKGQDMVGRARTGTGKTLAFGIPILDKIIQSNAKHGQGRDP--LALVLAPTRELARQVE 186
++G+D++ +A+TGTGKT+AF +P ++ +I++ R P + LV+ PTRELA Q
Sbjct: 114 ILQGKDILAKAKTGTGKTVAFLLPSIEAVIKAPPASRDNRHPPIIVLVVCPTRELACQAA 173
Query: 187 NE---FKDAAPNLSTICLYGGTPISNQMRELDYG-VDIAVGTPGRIIDLLNRGS---LNL 239
E P++ + GGT + + R L I V TPGR+ D ++ S L
Sbjct: 174 AEANILLKYHPSIGVQVVIGGTKLPTEQRRLQKSPCQILVATPGRLKDHIDNTSGFATRL 233
Query: 240 NAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQTLMFSATMPPEIKNII-----RNYL 294
V+ +VLDEAD +L +GF+ ++E+I++ +P QRQT +FSAT+ E++ I R++
Sbjct: 234 MGVKVLVLDEADHLLDMGFRREIERIIAAVPKQRQTFLFSATVSDEVRQICHVALKRDHE 293
Query: 295 NSPLTIDLVGDSNQKLADGISLYSIASSAYTKAGILAPLITEHANGGKCIVFTQTKRDAD 354
+ G+++QK++ + S+ G+L IT++ G K I+F T
Sbjct: 294 FVNCVQEGAGETHQKVSQMYMIASLDRHFSLLYGLLKKHITDNV-GYKVIIFCTTAMVTR 352
Query: 355 RLSYMMSK-SLKCEALHGDISQAQRERTLAGFRNNYFNVLVATDVASRGLDIPNVDLVIH 413
++ ++ K SL +H Q+ R R FR + +LV +DV++RG+D P+V LV+
Sbjct: 353 LVADLLGKLSLNVREIHSRKPQSYRTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQ 412
Query: 414 YDPPNNSEIFVHRSXXXXXXXXXXXXILVYTEVQSRAISTIERDVGCKFTELPKID 469
P++ E ++HR +L+ + +S++ +D+ + LP ID
Sbjct: 413 MGLPSDREQYIHRLGRTGRKGKEGEGVLLLAPWEEYFLSSV-KDLPITKSSLPPID 467
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 185/345 (53%), Gaps = 25/345 (7%)
Query: 102 ISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQSN 161
IS + AL+ GI K+ +Q A L + G+D + +A+TGTGK++AF +P ++ ++++
Sbjct: 335 ISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIETVLKA- 393
Query: 162 AKHGQGRDPLA----LVLAPTRELARQVENE------FKDAAPNLSTICLYGGTPIS-NQ 210
G+G + +A L+L PTRELA Q+ E F D + L GGT +Q
Sbjct: 394 MNSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKFHDG---IGVQTLIGGTRFKLDQ 450
Query: 211 MRELDYGVDIAVGTPGRIID-LLNRGSLN--LNAVQFVVLDEADQMLQVGFQEDVEKILS 267
R I + TPGR++D + N+ L L A++ ++DEAD +L +GF+ DVEKI+
Sbjct: 451 QRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFRRDVEKIID 510
Query: 268 RLPPQRQTLMFSATMPPEIKNIIRNYLNSPLT-IDLVGDSNQKLADGISLYSIASSAYTK 326
LP QRQ+L+FSAT+P E++ + + L + ID +G + D + I + +
Sbjct: 511 CLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVRQSCIVAPHESH 570
Query: 327 AGILAPLITEHANGG---KCIVFTQTKRDADRLSYMMSKSLK--CEALHGDISQAQRERT 381
++ L+ EH N K IVF T L Y + + +K +H Q R R
Sbjct: 571 FHLVPHLLKEHINNTPDYKIIVFCSTGM-VTSLMYTLLREMKLNVREIHARKPQLHRTRV 629
Query: 382 LAGFRNNYFNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
F+ + +LV +DV++RG++ P+V LVI P++ E ++HR
Sbjct: 630 SDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHR 674
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 192/380 (50%), Gaps = 21/380 (5%)
Query: 107 VDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQSNAKHGQ 166
+ A+ G + +Q A L +KG+D++ +A+TGTGKT+AF +P ++ +++S
Sbjct: 332 LKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPTSPD 391
Query: 167 GRDP--LALVLAPTRELARQVENE---FKDAAPNLSTICLYGGTPISNQMRELDYG-VDI 220
+ P LALV+ PTRELA Q E P++ + GGT + + + + I
Sbjct: 392 NKRPPILALVICPTRELANQAATEANTLLKYHPSIGVQVVIGGTRLGLEQKRMQTNPCQI 451
Query: 221 AVGTPGRIIDLLNRG---SLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQTLM 277
V TPGR+ D + + L V+ +VLDEAD +L +GF++D+E+I+S +P +RQT +
Sbjct: 452 LVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKDIERIISAVPKERQTFL 511
Query: 278 FSATMPPEIKNIIRNYLNSPLT-IDLVGDSNQKLADGISLYSIASSAYTKAGILAPLITE 336
FSAT+P E++ I L ++ V + + + + +S +L L+ E
Sbjct: 512 FSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQQVRQMHMIASLDRHFSLLYTLLRE 571
Query: 337 HANGG---KCIVFTQ----TKRDADRLSYMMSKSLKCEALHGDISQAQRERTLAGFRNNY 389
H G K IVF TK AD L + +L +H Q+ R R FR +
Sbjct: 572 HIMGNVDYKVIVFCTTAMVTKLVADLLGEL---NLNVREIHSRKPQSYRTRVSNEFRKSK 628
Query: 390 FNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHRSXXXXXXXXXXXXILVYTEVQSR 449
+LV +DV++RG+D P+V LV+ P + E ++HR IL+ +
Sbjct: 629 GLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRLGRTGRKGKEGEGILLLAPWEEY 688
Query: 450 AISTIERDVGCKFTELPKID 469
+S++ +D+ + LP ID
Sbjct: 689 FLSSL-KDLPITKSPLPSID 707
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 183/342 (53%), Gaps = 19/342 (5%)
Query: 102 ISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQSN 161
IS + AL+ GI K+ +Q A L + G+D + +A+TGTGK++AF +P ++ ++++
Sbjct: 382 ISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIETVLKA- 440
Query: 162 AKHGQGRDPLA----LVLAPTRELARQVENEFKDAAPNLSTI---CLYGGTPIS-NQMRE 213
G+G +A L+L PTRELA Q+ E K N I L GGT +Q R
Sbjct: 441 MNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQTLIGGTRFRLDQQRL 500
Query: 214 LDYGVDIAVGTPGRIID-LLNRGSLN--LNAVQFVVLDEADQMLQVGFQEDVEKILSRLP 270
I + TPGR++D + N+ L L A++ ++DEAD +L +GF+ DVEKI+ LP
Sbjct: 501 ESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFKRDVEKIIDCLP 560
Query: 271 PQRQTLMFSATMPPEIKNIIRNYLNSPLT-IDLVGDSNQKLADGISLYSIASSAYTKAGI 329
QRQ+L+FSAT+P E++ + + L + ID +G + D + I + + +
Sbjct: 561 RQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVKQSCIVAPHESHFHL 620
Query: 330 LAPLITEHANGG---KCIVFTQTKRDADRLSYMMSKSLK--CEALHGDISQAQRERTLAG 384
+ L+ EH N K IVF T L Y + + +K +H Q R
Sbjct: 621 VPHLLKEHINNMPDYKIIVFCSTGM-VTSLMYTLLREMKLNVREIHARKPQLHRTCVSDE 679
Query: 385 FRNNYFNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
F+ + +LV +DV++RG++ P+V LVI P++ E ++HR
Sbjct: 680 FKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHR 721
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 184/339 (54%), Gaps = 12/339 (3%)
Query: 95 LEIAKLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPIL 154
L G+ +++ L G PIQ + A+ G+ ++ A TG+GKT +F +PI+
Sbjct: 110 LTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPII 169
Query: 155 DKIIQSNAKH--GQGRDPLALVLAPTRELARQVENEFKDAAPNL--STICLYGGTPISNQ 210
+ +++H Q R+PLA+VLAPTREL QVE++ K L T + GG P+S Q
Sbjct: 170 SRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQ 229
Query: 211 MRELDYGVDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLP 270
+ + GV++ +GTPGR++DLL++ ++ L+ + VLDE D MLQ GF++ V +I L
Sbjct: 230 LYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQAL- 288
Query: 271 PQRQTLMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQ--KLADGISLYSIASSAYTKAG 328
Q Q L+FSAT+ E++ + L + + +G+ N+ K + ++++ + K
Sbjct: 289 SQPQVLLFSATISREVEK-VGGSLAKEIILVSIGNPNKPNKAVNQLAIW--VDAKQKKQK 345
Query: 329 ILAPLITEHANGGKCIVFTQTKRDADRLSYMMS--KSLKCEALHGDISQAQRERTLAGFR 386
+ L +++ +V+ ++ AD L+ ++ +K ++HG+ +R + F
Sbjct: 346 LFDILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFL 405
Query: 387 NNYFNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVH 425
VLV+T V RG+D+ V VI +D P+ + ++H
Sbjct: 406 GGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIH 444
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 184/339 (54%), Gaps = 12/339 (3%)
Query: 95 LEIAKLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPIL 154
L G+ +++ L G PIQ + A+ G+ ++ A TG+GKT +F +PI+
Sbjct: 110 LTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPII 169
Query: 155 DKIIQSNAKH--GQGRDPLALVLAPTRELARQVENEFKDAAPNL--STICLYGGTPISNQ 210
+ +++H Q R+PLA+VLAPTREL QVE++ K L T + GG P+S Q
Sbjct: 170 SRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQ 229
Query: 211 MRELDYGVDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLP 270
+ + GV++ +GTPGR++DLL++ ++ L+ + VLDE D MLQ GF++ V +I L
Sbjct: 230 LYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQAL- 288
Query: 271 PQRQTLMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQ--KLADGISLYSIASSAYTKAG 328
Q Q L+FSAT+ E++ + L + + +G+ N+ K + ++++ + K
Sbjct: 289 SQPQVLLFSATISREVEK-VGGSLAKEIILVSIGNPNKPNKAVNQLAIW--VDAKQKKQK 345
Query: 329 ILAPLITEHANGGKCIVFTQTKRDADRLSYMMS--KSLKCEALHGDISQAQRERTLAGFR 386
+ L +++ +V+ ++ AD L+ ++ +K ++HG+ +R + F
Sbjct: 346 LFDILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFL 405
Query: 387 NNYFNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVH 425
VLV+T V RG+D+ V VI +D P+ + ++H
Sbjct: 406 GGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIH 444
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 172/305 (56%), Gaps = 12/305 (3%)
Query: 129 AMKGQDMVGRARTGTGKTLAFGIPILDKIIQSNAKH--GQGRDPLALVLAPTRELARQVE 186
A+ G+ ++ A TG+GKT +F +PI+ + +++H Q R+PLA+VLAPTREL QVE
Sbjct: 7 ALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVE 66
Query: 187 NEFKDAAPNL--STICLYGGTPISNQMRELDYGVDIAVGTPGRIIDLLNRGSLNLNAVQF 244
++ K L T + GG P+S Q+ + GV++ +GTPGR++DLL++ ++ L+ +
Sbjct: 67 DQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMT 126
Query: 245 VVLDEADQMLQVGFQEDVEKILSRLPPQRQTLMFSATMPPEIKNIIRNYLNSPLTIDLVG 304
VLDE D MLQ GF++ V +I L Q Q L+FSAT+ E++ + L + + +G
Sbjct: 127 FVLDEVDCMLQRGFRDQVMQIFQAL-SQPQVLLFSATISREVEK-VGGSLAKEIILVSIG 184
Query: 305 DSNQ--KLADGISLYSIASSAYTKAGILAPLITEHANGGKCIVFTQTKRDADRLSYMMS- 361
+ N+ K + ++++ + K + L +++ +V+ ++ AD L+ ++
Sbjct: 185 NPNKPNKAVNQLAIW--VDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVGADLLANAITV 242
Query: 362 -KSLKCEALHGDISQAQRERTLAGFRNNYFNVLVATDVASRGLDIPNVDLVIHYDPPNNS 420
+K ++HG+ +R + F VLV+T V RG+D+ V VI +D P+
Sbjct: 243 VTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTI 302
Query: 421 EIFVH 425
+ ++H
Sbjct: 303 KEYIH 307
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 169/331 (51%), Gaps = 20/331 (6%)
Query: 105 EIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQSNAKH 164
E++ A+ G +Q + A+ G D++ +A++G GKT F + L +I S +
Sbjct: 56 ELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQV 115
Query: 165 GQGRDPLALVLAPTRELARQVENEF---KDAAPNLSTICLYGGTPISNQMRELDYGV-DI 220
ALVL TRELA Q+ NEF P+ YGG I L I
Sbjct: 116 S------ALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHI 169
Query: 221 AVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQ-VGFQEDVEKILSRLPPQRQTLMFS 279
VGTPGR++ L L+L V+ +LDE D+ML+ + + DV++I P +Q +MFS
Sbjct: 170 VVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFS 229
Query: 280 ATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADGISLYSIASSAYTKAGILAPLITEHAN 339
AT+ EI+ + + ++ P+ I V D + G+ + I S K L L+ + +
Sbjct: 230 ATLSKEIRPVCKKFMQDPMEI-YVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLL-DALD 287
Query: 340 GGKCIVFTQTKRDADRLSYMMSKSLKCE----ALHGDISQAQRERTLAGFRNNYFNVLVA 395
+ ++F ++ A L+ ++ ++C +H +SQ +R F+ + +LVA
Sbjct: 288 FNQVVIFVKSVSRAAELNKLL---VECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVA 344
Query: 396 TDVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
TD+ RG+DI V++VI+YD P++++ ++HR
Sbjct: 345 TDLVGRGIDIERVNIVINYDMPDSADTYLHR 375
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 169/331 (51%), Gaps = 20/331 (6%)
Query: 105 EIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQSNAKH 164
E++ A+ G +Q + A+ G D++ +A++G GKT F + L +I S +
Sbjct: 56 ELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQV 115
Query: 165 GQGRDPLALVLAPTRELARQVENEF---KDAAPNLSTICLYGGTPISNQMRELDYGV-DI 220
ALVL TRELA Q+ NEF P+ YGG I L I
Sbjct: 116 S------ALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHI 169
Query: 221 AVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQ-VGFQEDVEKILSRLPPQRQTLMFS 279
VGTPGR++ L L+L V+ +LDE D+ML+ + + DV++I P +Q +MFS
Sbjct: 170 VVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFS 229
Query: 280 ATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADGISLYSIASSAYTKAGILAPLITEHAN 339
AT+ EI+ + + ++ P+ I V D + G+ + I S K L L+ + +
Sbjct: 230 ATLSKEIRPVCKKFMQDPMEI-YVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLL-DALD 287
Query: 340 GGKCIVFTQTKRDADRLSYMMSKSLKCE----ALHGDISQAQRERTLAGFRNNYFNVLVA 395
+ ++F ++ A L+ ++ ++C +H +SQ +R F+ + +LVA
Sbjct: 288 FNQVVIFVKSVSRAAELNKLL---VECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVA 344
Query: 396 TDVASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
TD+ RG+DI V++VI+YD P++++ ++HR
Sbjct: 345 TDLVGRGIDIERVNIVINYDMPDSADTYLHR 375
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 183/375 (48%), Gaps = 70/375 (18%)
Query: 121 IQRAVLE-PAMKGQDMVGRARTGTGKTLAFGIPILDKIIQSNAKHGQ-----GRDP---- 170
IQ+A A +G+D++G A TG+GKTLAFG+PIL +++ K G+ G +
Sbjct: 216 IQKACFNVAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEEAQKYA 275
Query: 171 -----LALVLAPTRELARQVENEFKDAAPNLST--ICLYGGTPISNQMRELDYGVDIAVG 223
AL++ PTRELA QV ++AA NLS + + GG Q R L +I V
Sbjct: 276 ADGYLRALIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEIVVA 335
Query: 224 TPGRIIDLLNRGS---LNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLP---------- 270
TPGR+ +L++ G + L+++ F VLDEAD+M++ G +++ IL LP
Sbjct: 336 TPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDKPNEGKT 395
Query: 271 --------------PQRQTLMFSATMPPEI---KNIIRNYLNSPLTIDLVGDSNQKLADG 313
+RQT +FSAT+ K + R S + +S + L++
Sbjct: 396 QTVKSNDTVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQSSSGEVNSIEVLSER 455
Query: 314 ISLY-SIASSAYTKAGILAPLITE--------------------HANGGKCIVFTQTKRD 352
+ ++A T ILAP I E H G + IVF + D
Sbjct: 456 AGMRDNVAIIDLTTTSILAPKIEESFIKCEEKEKDAYLYYILSVHGQG-RTIVFCTSVTD 514
Query: 353 ADRLSYMMS-KSLKCEALHGDISQAQRERTLAGFRNNYFNVLVATDVASRGLDIPNVDLV 411
+S ++ L L ++ Q R +++ FR + +L+ATD+ +RG+DI NV +
Sbjct: 515 LRHISGLLKILGLDVCTLFSEMKQRARLKSIDRFRASENGILIATDLVARGIDIKNVRTI 574
Query: 412 IHYDPPNNSEIFVHR 426
IHY P+++E++VHR
Sbjct: 575 IHYKLPHSAEVYVHR 589
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 157/302 (51%), Gaps = 20/302 (6%)
Query: 134 DMVGRARTGTGKTLAFGIPILDKIIQSNAKHGQGRDPLALVLAPTRELARQVENEF---K 190
D++ +A++G GKT F + L +I S + ALVL TRELA Q+ NEF
Sbjct: 2 DVICQAKSGMGKTAVFVLSTLQQIEPSPGQVS------ALVLCHTRELAYQICNEFVRFS 55
Query: 191 DAAPNLSTICLYGGTPISNQMRELDYGV-DIAVGTPGRIIDLLNRGSLNLNAVQFVVLDE 249
P+ YGG I L I VGTPGR++ L L+L V+ +LDE
Sbjct: 56 TYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDE 115
Query: 250 ADQMLQ-VGFQEDVEKILSRLPPQRQTLMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQ 308
D+ML+ + + DV++I P +Q +MFSAT+ EI+ + + ++ P+ I V D +
Sbjct: 116 CDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI-YVDDEAK 174
Query: 309 KLADGISLYSIASSAYTKAGILAPLITEHANGGKCIVFTQTKRDADRLSYMMSKSLKCE- 367
G+ + I S K L L+ + + + ++F ++ A L+ ++ ++C
Sbjct: 175 LTLHGLVQHYIKLSEMEKNRKLNDLL-DALDFNQVVIFVKSVSRAAELNKLL---VECNF 230
Query: 368 ---ALHGDISQAQRERTLAGFRNNYFNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFV 424
+H +SQ +R F+ + +LVATD+ RG+DI V++VI+YD P++++ ++
Sbjct: 231 PSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 290
Query: 425 HR 426
HR
Sbjct: 291 HR 292
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 163/314 (51%), Gaps = 33/314 (10%)
Query: 102 ISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQSN 161
+S++I++AL + G P+Q + +D+V A TG+GKTLAF +P ++ I +SN
Sbjct: 24 LSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSN 83
Query: 162 AKHGQGRDPLALVLAPTRELARQVENEFKDAAPNLSTICLYGGTPISNQMREL-DYGVDI 220
+ + + ++++PTREL+ Q+ + + + + M L + G ++
Sbjct: 84 SYPPKPHQVMGVIISPTRELSAQIHKVARAVRLDFAKC-----REVEADMNTLEEEGANL 138
Query: 221 AVGTPGRIIDLLNRGS-LNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQTLMFS 279
+GTPGR+ D++ R L+ ++ ++LDEAD++L +GFQ+ V I+SRLP QR+T +FS
Sbjct: 139 LIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLFS 198
Query: 280 ATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADGISLYSIASSAYTKAGILAPLITEHAN 339
AT + ++ + L +P + A K+ L L+ E+ N
Sbjct: 199 ATQTQAVADLAKAGLRNPY--------------------LKCEADQKSSQLVHLLIENKN 238
Query: 340 GGKCIVFTQTKRDADRLSYMMSK--SLKCEAL---HGDISQAQRERTLAGFRNNYFNVLV 394
K +VF T D ++SK SLK + HG + Q R+ LA F VL+
Sbjct: 239 -KKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASSGVLL 297
Query: 395 ATDVASRGLDIPNV 408
TDVA+RGLDIP +
Sbjct: 298 CTDVAARGLDIPGI 311
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 176/367 (47%), Gaps = 11/367 (2%)
Query: 96 EIAKLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILD 155
+ A+L IS + L + +Q A + A+ G+D++G ARTG+GKTLAF IPIL+
Sbjct: 72 KFAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILE 131
Query: 156 KIIQSNAKHGQGRDPLALVLAPTRELARQVENEFKDAAP--NLSTICLYGGTPISNQMRE 213
K+ + G ++++PTRELA Q S L GG + +E
Sbjct: 132 KLHRERWSPEDGVG--CIIISPTRELAAQTFGVLNKVGKFHKFSAGLLIGGREGVDVEKE 189
Query: 214 LDYGVDIAVGTPGRIIDLLNRG-SLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQ 272
+ ++I V PGR++ ++ + +Q ++LDEAD++L F+ ++ I+S+LP
Sbjct: 190 RVHEMNILVCAPGRLLQHMDETPNFECPQLQILILDEADRVLDSAFKGQLDPIISQLPKH 249
Query: 273 RQTLMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADGISLYSIASSAYTKAGILAP 332
RQTL+FSAT ++K++ R L P I + ++ + + K +L
Sbjct: 250 RQTLLFSATQTKKVKDLARLSLRDPEYISVHAEAVTATPTSLMQTVMIVPVEKKLDMLWS 309
Query: 333 LITEHANGGKCIVFTQTKRDADRLSYMMSK---SLKCEALHGDISQAQRERTLAGFRNNY 389
I H N + +VF TK+ + +K + ++LHG +SQ +R + F
Sbjct: 310 FIKTHLN-SRILVFLSTKKQVKFVHEAFNKLRPGIPLKSLHGKMSQEKRMGVYSQFIERQ 368
Query: 390 FNVLVATDVASRGLDIPN-VDLVIHYDPPNNSEIFVHRSXXXXXXXXXXXXILVYTEVQS 448
+VL TDV +RGLD VD V+ D P + ++HR +L T +
Sbjct: 369 -SVLFCTDVLARGLDFDKAVDWVVQVDCPEDVASYIHRVGRTARFYTQGKSLLFLTPSEE 427
Query: 449 RAISTIE 455
+ I ++
Sbjct: 428 KMIEKLQ 434
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 207/440 (47%), Gaps = 65/440 (14%)
Query: 86 FTANSSDEGLEIAKLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGK 145
F+A S +E LG+ ++D+L ++G + +Q A + +KG D V ++ TG+GK
Sbjct: 107 FSAKSFEE------LGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGK 160
Query: 146 TLAFGIPILDKI-------IQSNAKHGQGRDPLALVLAPTRELARQVENEF-KDAAPNLS 197
TLA+ +PIL +I S++++ + + A+++AP+REL Q+ E K P
Sbjct: 161 TLAYLLPILSEIGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHR 220
Query: 198 TIC--LYGGTPISNQMRELDY----GVDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEAD 251
+ L GG +N+MR+ + I VGTPGRI ++ G L+ + +F+VLDE D
Sbjct: 221 RMVQQLVGG---ANRMRQEEALKKNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDEVD 277
Query: 252 QMLQVGFQEDVEKILSRLPPQ--------------RQTLMFSATMPPEIKNIIRNYLNSP 297
++L F+ED+ +IL + + RQT++ SAT+P + +++ + P
Sbjct: 278 ELLSFNFREDIHRILEHVGKRSGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEP 337
Query: 298 LTIDLVG----DSNQKLADGISLYSIASSA----YTKAGILAP------LITEHANG--- 340
+ + D+ Q A +SL S A T L P I++H +
Sbjct: 338 VLVQANKVTPLDTVQPSAPVMSLTPTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDT 397
Query: 341 -GKC---------IVFTQTKRDADRLSYMM-SKSLKCEALHGDISQAQRERTLAGFRNNY 389
+C I F R + Y + ++ + +HGD+ + R L F+N
Sbjct: 398 LRRCVHALDAQSVIAFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGE 457
Query: 390 FNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHRSXXXXXXXXXXXXILVYTEVQSR 449
VLV ++++RGLD+ DLV++ + P ++ + HR+ + V E Q
Sbjct: 458 IKVLVTNELSARGLDVAECDLVVNLELPTDAVHYAHRAGRTGRLGRKGTVVTVCEESQVF 517
Query: 450 AISTIERDVGCKFTELPKID 469
+ +E+ +G F +D
Sbjct: 518 IVKKMEKQLGLPFLYCEFVD 537
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 181/349 (51%), Gaps = 25/349 (7%)
Query: 99 KLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKII 158
+LG+S+E++ AL + I IQ + M+ + +V + TG+GKTLA+ +PI+ +
Sbjct: 116 ELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIVQLMR 175
Query: 159 QSNAKHGQG---RDPLALVLAPTRELARQVENEFKDAA--PNLSTICLYGGTPISNQMRE 213
+ A G+ R P +VL PTREL+ QV K + +I + GG+ I Q
Sbjct: 176 EDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSGGSRIRPQEDS 235
Query: 214 LDYGVDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQR 273
L+ +D+ VGTPGRI+ + G++ + ++VLDEAD M GF ++ K L+ L QR
Sbjct: 236 LNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAPL-NQR 294
Query: 274 ---------QTLMFSATMPPEIKNIIRNYLNSPLTIDLVGDS--NQKLADGISLYSIASS 322
QT++ +ATM ++ ++ I+ + S ++K+A+ + S
Sbjct: 295 ALKTNDQGFQTVLVTATMTMAVQKLVDEEFQG---IEHLRTSTLHKKIANARHDFIKLSG 351
Query: 323 AYTK-AGILAPLITEHANGGKCIVFTQTKRDADRLSYMMSKS-LKCEALHGDISQAQRER 380
K +L L A G K +VF T + + + +S++ + HG++ QR
Sbjct: 352 GEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRVE 411
Query: 381 TLAGFRNNYFN--VLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHRS 427
L F++ + LV TD+A+RGLD+ +VD V+ +D P NS ++HR+
Sbjct: 412 NLKKFKDEEGDCPTLVCTDLAARGLDL-DVDHVVMFDFPKNSIDYLHRT 459
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 174/374 (46%), Gaps = 46/374 (12%)
Query: 99 KLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKII 158
+LG+ ++ AL KKGI K IQ++ + ++G+D+V RA+TG+GKTLA+ +P+L K+
Sbjct: 50 ELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLLQKLF 109
Query: 159 QSNAKHGQGRDPLALVLAPTRELARQVENEFKD----AAPNLSTICLYGGTPISNQMREL 214
+++ + P A +L P+REL +QV E L + L S+ L
Sbjct: 110 SADSVSKKKLAPSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSMSASDMRNAL 169
Query: 215 DYGVDIAVGTPGRIIDLLNRGSLNLNAV----QFVVLDEADQMLQVGFQEDVEKILSRLP 270
+I V TP I G L AV +VLDEAD +L G+++++ + S +P
Sbjct: 170 AGLPEILVSTPACIPKCFAAGVLEPTAVSESLSILVLDEADLLLSYGYEDNLRSVTSIIP 229
Query: 271 PQRQTLMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLA--DGISLYSIASSAYTKAG 328
+ Q L+ SAT +++ + + L++P+ + L D++++ A + + I+ SA K
Sbjct: 230 RRCQCLLMSATTSSDVEKLKKLILHNPIVLTLTEDNDKEEAVPSNVQQFWISCSAQDKLL 289
Query: 329 ILAPLITEHANGGKCIVFTQTKRDADRLSYMMSK-SLKCEALHGDISQAQRERTLAGFRN 387
+ L+ K ++F T RL + K +K L+G++ Q R L F
Sbjct: 290 HILALLKLEVVQKKILIFINTIDMGFRLKLFLEKFGIKSAILNGELPQNSRLHILEQFNA 349
Query: 388 NYFNVLVATDVAS-----------------------------------RGLDIPNVDLVI 412
F+ L+ATD S RG+D V VI
Sbjct: 350 GLFDYLIATDDNSQTKKQKEEAKGEANKENKKNNKRSKPKLDAEFGVVRGIDFKKVHTVI 409
Query: 413 HYDPPNNSEIFVHR 426
++D P + ++HR
Sbjct: 410 NFDMPQSVTGYIHR 423
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 170/371 (45%), Gaps = 59/371 (15%)
Query: 105 EIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQSNAKH 164
E++ A+ G +Q + A+ G D++ +A++G GKT F + L +I S +
Sbjct: 56 ELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQV 115
Query: 165 GQGRDPLALVLAPTRELARQVENEF---KDAAPNLSTICLYGGTPISNQMRELDYGV-DI 220
ALVL TRELA Q+ NEF P+ YGG I L I
Sbjct: 116 S------ALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHI 169
Query: 221 AVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQ-VGFQEDVEKILSRLPPQRQTLMFS 279
VGTPGR++ L L+L V+ +LDE D+ML+ + + DV++I P +Q +MFS
Sbjct: 170 VVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFS 229
Query: 280 ATMPPEIKNIIRNY------------------------------------LNSPLTID-- 301
AT+ EI+ + + + LN P ID
Sbjct: 230 ATLSKEIRPVCKKFMQDGLRTLSGDSVALWWVGFGSGYCVFPRFHRARMGLNVPSNIDPM 289
Query: 302 --LVGDSNQKLADGISLYSIASSAYTKAGILAPLITEHANGGKCIVFTQTKRDADRLSYM 359
V D + G+ + I S K L L+ + + + ++F ++ A L+ +
Sbjct: 290 EIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLL-DALDFNQVVIFVKSVSRAAELNKL 348
Query: 360 MSKSLKCE----ALHGDISQAQRERTLAGFRNNYFNVLVATDVASRGLDIPNVDLVIHYD 415
+ ++C +H +SQ +R F+ + +LVATD+ RG+DI V++VI+YD
Sbjct: 349 L---VECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYD 405
Query: 416 PPNNSEIFVHR 426
P++++ ++HR
Sbjct: 406 MPDSADTYLHR 416
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 196/473 (41%), Gaps = 90/473 (19%)
Query: 78 DYAHENDGFTANSSDEGLEIAKLGISQEIVDALAKK-GIAKLFPIQRAVLEPAMKGQDMV 136
D + G A+ S + LG+ ++ D L ++ G +Q + + G+D++
Sbjct: 17 DASKAKSGLFASCS-----FSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVL 71
Query: 137 GRARTGTGKTLAFGIPILDKIIQSNAKHGQGRDPLALVLAPTRELARQVENEFKDAAPNL 196
A TGTGKT+A+ P++ + + K + ALV+ PTREL QV +
Sbjct: 72 VNAPTGTGKTIAYLAPLIHHLQGHSPKVDRSHGTFALVIVPTRELCLQVYETLEKLLHRF 131
Query: 197 STIC---LYGGTPISNQMRELDYGVDIAVGTPGRIID-LLNRGSLNLNAVQFVVLDEADQ 252
I + GG + + L G+ I + TPGR++D L N S +++V+ DEAD
Sbjct: 132 HWIVPGYVMGGEKKAKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADS 191
Query: 253 MLQVGFQEDVEKILSRLPP----------------QRQTLMFSATMPPEIKNIIRNYLNS 296
+L++G+ +++E+I+ L Q+Q L+ SAT+ ++ ++ + L+
Sbjct: 192 ILELGYGKEIEQIIKLLGSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAKLSLDD 251
Query: 297 PLTIDLVGDSNQKLADGISLYSIAS------------------------------SAYTK 326
P+ ++G N KL +S+ S A+ Y +
Sbjct: 252 PV---MIGLDNTKLQQNLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLR 308
Query: 327 AGILAPLIT---------EHANGGKCIVFTQTKRDADRLSYMMSKS-------------- 363
A L+ E K +VF T RDA Y +
Sbjct: 309 VPCGARLVALLSVLKNLFEREASQKVVVFFST-RDAVDFHYSLLSEFQWPPNSETEEEGT 367
Query: 364 ----LKCEA--LHGDISQAQRERTLAGFRNNYFNVLVATDVASRGLDIPNVDLVIHYDPP 417
LKC+ LHG + Q R F+ VL++TDVA+RGLD P V +I YD P
Sbjct: 368 KELFLKCKTFRLHGSMEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCP 427
Query: 418 NNSEIFVHRSXXXXXXXXXXXXILVYTEVQSRAISTIERDVGCKFTELPKIDV 470
+ +VHR +L ++ + +++ G TE P + V
Sbjct: 428 GEATEYVHRVGRTARIGEKGEALLFLQPIEIDYLKELKKH-GASLTEYPLMKV 479
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 178/388 (45%), Gaps = 75/388 (19%)
Query: 105 EIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQSNAKH 164
E++ A+ G +Q + A+ G D++ +A++G GKT F + L +I S +
Sbjct: 56 ELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQV 115
Query: 165 GQGRDPLALVLAPTRELARQVENEF---KDAAPNLSTICLYGGTPISNQMRELDYGV-DI 220
ALVL TRELA Q+ NEF P+ YGG I L I
Sbjct: 116 S------ALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHI 169
Query: 221 AVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQ-VGFQEDVEKILSRLPPQRQTLMFS 279
VGTPGR++ L L+L V+ +LDE D+ML+ + + DV++I P +Q +MFS
Sbjct: 170 VVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFS 229
Query: 280 ATMPPEIKNIIRNYL-----NSPLTIDL----VGDSNQKLAD-------GISLYSIASSA 323
AT+ EI+ + + ++ N +++ L V +S +L +S++
Sbjct: 230 ATLSKEIRPVCKKFMQDFLENETVSVRLFSFGVENSEWRLCSFGFIVLVWVSMFRAILMF 289
Query: 324 YTKAGI--------LAPL---------ITEHA------------------------NGGK 342
++K I ++P+ +T H + +
Sbjct: 290 HSKTHIFEEKRWTRISPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQ 349
Query: 343 CIVFTQTKRDADRLSYMMSKSLKCE----ALHGDISQAQRERTLAGFRNNYFNVLVATDV 398
++F ++ A L+ ++ ++C +H +SQ +R F+ + +LVATD+
Sbjct: 350 VVIFVKSVSRAAELNKLL---VECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDL 406
Query: 399 ASRGLDIPNVDLVIHYDPPNNSEIFVHR 426
RG+DI V++VI+YD P++++ ++HR
Sbjct: 407 VGRGIDIERVNIVINYDMPDSADTYLHR 434
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 194/445 (43%), Gaps = 79/445 (17%)
Query: 102 ISQEIVDALAKKGIAKLFPIQRAVLE----PAMKGQDMVGRARTGTGKTLAFGIPILDKI 157
++ ++ AL GI+ LFP+Q AV P +D+ + TG+GKTL++ +PI+ +
Sbjct: 38 LNPKLKKALENMGISSLFPVQVAVWHETIGPGGFERDICVNSPTGSGKTLSYALPIVQLL 97
Query: 158 IQSNAKHGQGRDPLALVLAPTRELARQVENEFKDAAP--NLSTICLYGGTPISNQMREL- 214
+ + ALV+ PTR+LA QV++ F AP LS G + I+ ++ +L
Sbjct: 98 ASRPVRCLR-----ALVVLPTRDLALQVKDVFDAIAPAVGLSVGSAVGQSSIAGEISQLI 152
Query: 215 --------------------DYGVDIAVGTPGRIIDLLNRGS-LNLNAVQFVVLDEADQM 253
+ VDI V TPGR++D +N L ++++V+DE D++
Sbjct: 153 KTPKLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRL 212
Query: 254 LQVGFQEDVEKIL--------SRLP------------------------------PQRQT 275
L+ +Q + +L S P P+
Sbjct: 213 LREAYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLVK 272
Query: 276 LMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADGISLYSIASSAYTKAGILAPLIT 335
++ SAT+ + +I+ L+ PL + G S +L + + + K L L+
Sbjct: 273 MVLSATLTQDPSKLIQLDLHHPLFMT-TGGSRYRLPEKLECLRLICETGMKPVYLVALL- 330
Query: 336 EHANGGKCIVFTQ----TKRDADRLSYMMSKSLKCEALHGDISQAQRERTLAGFRNNYFN 391
+ G KCI+FT T+R L++ +K + G ++Q+ R + L FR
Sbjct: 331 KSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSLRSKELKAFRKGDIQ 390
Query: 392 VLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHRSXXXXXXXXXXXXILVYTEVQSRAI 451
VLVA+D +RG+D+ V VI+YD P ++ F+HR+ + + + R
Sbjct: 391 VLVASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAGRCFTLLSNHEVRRF 450
Query: 452 STIERDVGCKFTELPKIDVPSGSVD 476
S + VG P +P S+D
Sbjct: 451 SKLLEKVGSD--SCPIYPIPPTSLD 473
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 160/354 (45%), Gaps = 17/354 (4%)
Query: 98 AKLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKI 157
++ G I+ LA+ G + PIQR + + G++ A TG+GKT AF P+L K+
Sbjct: 144 SRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFICPMLIKL 203
Query: 158 IQSNAKHGQGRDPLALVLAPTRELARQVENEFKDAAPNLSTICLYGGTPISNQMRELDYG 217
K A++L+P RELA Q E K + P+
Sbjct: 204 -----KRPSTDGIRAVILSPARELAAQTAREGKKLIKGSNFHIRLMTKPLVKTADFSKLW 258
Query: 218 VDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLP-PQRQTL 276
D+ + TP R+ + ++L+ V+++VLDE+D++ + + ++ ++ P
Sbjct: 259 CDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQSLLKQIDCVVKACSNPSIIRS 318
Query: 277 MFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADGISLYSIASSAYTKAGILAPLITE 336
+FSAT+P ++ + R+ ++ + + ++G N A S K L E
Sbjct: 319 LFSATLPDSVEELARSIMHDAVRV-IIGRKNTASETVKQKLVFAGSEEGKLLALRQSFAE 377
Query: 337 HANGGKCIVFTQTKRDADRLSYMMSKSLKCE-----ALHGDISQAQRERTLAGFRNNYFN 391
N ++F Q+K A L LKCE +H D+ +RE + FR
Sbjct: 378 SLNPP-VLIFVQSKERAKELY----DELKCENIRAGVIHSDLPPGERENAVDQFRAGEKW 432
Query: 392 VLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHRSXXXXXXXXXXXXILVYTE 445
VL+ATDV +RG+D ++ VI+YD P+++ ++HR I YTE
Sbjct: 433 VLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTE 486
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 153/312 (49%), Gaps = 31/312 (9%)
Query: 135 MVGRARTGTGKTLAFGIPILDKIIQSNAKHGQGRDPLALVLAPTRELARQ------VENE 188
++ +A G+GKT F + +L ++ + R+P AL + PTRELA Q +
Sbjct: 134 LIAQAHNGSGKTTCFVLGMLSRVDPT------LREPQALCICPTRELANQNMEVLQKMGK 187
Query: 189 FKDAAPNLSTICLYGGTPISNQMRELDYGVDIAVGTPGRIIDLLNRGSLNLNAVQFVVLD 248
F L+ G P + R + +GTPG + + L LN ++ +V D
Sbjct: 188 FTGITAELAVPDSTRGAPAAT--RGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLKILVFD 245
Query: 249 EADQMLQV-GFQEDVEKILS---RLPPQRQTLMFSATMPPEIKNIIRNYLNSPLTIDLVG 304
EAD ML GF++D KI+ R+ P Q L+FSAT +K+ + + P + +
Sbjct: 246 EADHMLATDGFRDDSLKIMKDIGRVNPNFQVLLFSATFNETVKDFVARTVKDPNQLFV-- 303
Query: 305 DSNQKLA-DGISLYSIAS-SAYTKAGILAPLITEHANGGKCIVFTQTKRDADRLSYMMSK 362
+ LA D + Y + K ++ I E + G+ I+F +TK A ++ +++
Sbjct: 304 -KREDLALDSVKQYKVVCPKEQNKIEVIKDQIMELGDIGQTIIFVKTKASAQKVHKALAE 362
Query: 363 -SLKCEALHGDISQAQRERTLAGFRNNYFNVLVATDVASRGLDIPNVDLVIHYDPPN--- 418
++HG+++++ R++ + F+ VL+ATDV +RG D V+LV++Y+ P
Sbjct: 363 MGYDVTSVHGNLTESDRDKIVKEFKECLTQVLIATDVIARGFDQQRVNLVVNYNLPTKYE 422
Query: 419 ----NSEIFVHR 426
+ E+++HR
Sbjct: 423 TGEPDYEVYLHR 434
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 164/368 (44%), Gaps = 50/368 (13%)
Query: 97 IAKLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDK 156
A++G S++++ AL ++ + IQ P + G+ + ++G+GKTLA+ +P++ +
Sbjct: 376 FAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVIQR 435
Query: 157 I----IQSNAKHGQGRDPLALVLAPTRELARQVENEFKDAAPN---LSTICLYGGTPISN 209
+ +Q ++K G P +VL PT ELA QV + + + ++ + GG
Sbjct: 436 LREEELQGHSKSSPG-CPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQRT 494
Query: 210 QMRELDYGVDIAVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQML-QVGFQEDVEKILSR 268
Q+ L+ GVD+ + TPGR L+N G L L+ ++ +LDE D + F+ ++ +++
Sbjct: 495 QLENLEQGVDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDILFGDDEFEAALQNLINS 554
Query: 269 LPPQRQTLMFSATMPPEIKNI------------------IRNYLNSPLTIDLVGDSNQKL 310
P Q L +AT+P EI N + N L L +D GD N +
Sbjct: 555 SPVTAQYLFVTATLPLEIYNKLVEVFPDCEVVMGPRVHRVSNALEEFL-VDCSGDDNAE- 612
Query: 311 ADGISLYSIASSAYTKAGILAPLITEHANGGKCIVFTQTKRDADRLSYMMSKSLKCEA-- 368
+A+ I E K I+F ++ + + + E
Sbjct: 613 -------KTPETAFQNKKTALLQIMEENPVSKTIIFCNKIETCRKVENIFKRVDRKERQL 665
Query: 369 ----LHGDISQAQRERTLAGF------RNNYFNVLVATDVASRGLDIPNVDLVIHYDPPN 418
H +SQ R + F N+ F LV TD ASRG+D VD V+ +D P
Sbjct: 666 HVLPFHAALSQESRLTNMQEFTSSQPEENSLF--LVCTDRASRGIDFSGVDHVVLFDFPR 723
Query: 419 NSEIFVHR 426
+ +V R
Sbjct: 724 DPSEYVRR 731
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 148/351 (42%), Gaps = 53/351 (15%)
Query: 115 IAKLFP--IQRAVLEPAMKGQDMVGRARTGTGKTLAFGIPILDKIIQSNAKHGQGRDPLA 172
I +FP IQR L G+D + A+TG+GKTL + + I I + Q A
Sbjct: 94 IGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLLIFSLI------NPQRSSVQA 147
Query: 173 LVLAPTRELARQVENEFKDAAPNLSTICLYGGTPISNQMRELDYGV-------------D 219
+++ PTREL QV + A S I + G T M LD G
Sbjct: 148 VIVVPTRELGMQVTKVARMLAAK-SEIDVKGCTV----MALLDGGTLRRHKSWLKAEPPA 202
Query: 220 IAVGTPGRIIDLLNRGSLNLNAVQFVVLDEADQML----QVGFQEDVEKILSRLPP--QR 273
I V T + +L + +++V+ +V+DE D + QVG V K+L+ +R
Sbjct: 203 ILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVG---SVRKLLTSFSSCDKR 259
Query: 274 QTLMFSATMPPEIKNIIRNYLNSPLTIDLVGDSNQKLADGISL-----YSIASSAYTKAG 328
QT+ SA++P K+ + + + T V + + L + +
Sbjct: 260 QTVFASASIPQH-KHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTNKHQV 318
Query: 329 ILAPLITEHANGGKCIVFTQTKRDA------------DRLSYMMSKSLKCEALHGDISQA 376
+LA L ++ V Q+++ + L SL+ L GD++
Sbjct: 319 LLALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFN 378
Query: 377 QRERTLAGFRNNYFNVLVATDVASRGLDIPNVDLVIHYDPPNNSEIFVHRS 427
R +L R +LV+TD+A+RG+D+P + ++D P ++HR+
Sbjct: 379 SRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRA 429
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 102/238 (42%), Gaps = 40/238 (16%)
Query: 83 NDGFTANSSDEGLEIAKLGISQEIVDALAKKGIAKLFPIQRAVLEPAMKGQDMVGRARTG 142
ND F A D + LG+S + AL G + Q + + G+D++ A TG
Sbjct: 71 NDTFFA---DHTVSWKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSILSGKDVIVAAETG 127
Query: 143 TGKTLAFGIPILDKI----IQSNAKHGQGR----DPLALVLAPTRELARQVENEF----- 189
+GKT + PI+D++ + S + + R ++L+L P L QV
Sbjct: 128 SGKTHGYLAPIIDQLTNTALDSEVTNREERPFPLKNISLILCPNVMLCEQVVRMVNGLVD 187
Query: 190 KDAAP--NLSTICLYGGTPISNQMRELDYGVDIAVGTPGRIIDLL----NRGSLNLNAVQ 243
+D P + +C G P D DI V TP +++ + NR L V+
Sbjct: 188 EDGNPLLRVEAVCGSQGWP--------DRLPDIIVSTPAALLNNIEPKRNRRLEFLRCVK 239
Query: 244 FVVLDEADQMLQVGFQEDVEKILSRLPPQRQTLMFSATMPPEIKNIIRNYLNSPLTID 301
+VV DEAD +L FQ + ++++ L + ++ + ++ L P+ ID
Sbjct: 240 YVVFDEADMLLCGSFQNQIIRLINMLRFDEK----------QVSRLAKSNLGRPMEID 287
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Query: 342 KCIVFTQTKRDADRLSYMMSK-SLKCEALHGDISQAQRERTLAGFRNNYFNVLVATDVAS 400
+ +VF T + ++ ++ K S++C H + +R LA FR V V TD A+
Sbjct: 426 RTMVFANTVEAVEAVADILEKASIQCYRYHKNHKLDERANILADFRETG-GVFVCTDAAA 484
Query: 401 RGLDIPNVDLVIHYDPPNNSEIFVHRSXXXXXXXXXXXXILVYTEVQSRAISTIERDV 458
RG+D+PNV VI D +++ F+HR +YTE + I V
Sbjct: 485 RGVDVPNVSHVIQADFASSAVDFLHRIGRTARAGQYGTVTSLYTEANRDLVEAIREAV 542
>AT2G28600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:12251845-12254672
FORWARD LENGTH=502
Length = 502
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 167 GRDPLALVLAPTRELARQVENEFKD-AAPNLSTICLYGGTPISNQMREL-DYGVDIAVGT 224
G P L L P++ A QV + K + T+ L+ G P+ +Q+ L + V T
Sbjct: 194 GNSPFLLYLVPSQSKASQVRSVCKALKGIGIHTVSLHQGAPLDHQISGLKSVEPEFIVAT 253
Query: 225 PGRIIDLLNRGSLNLNAVQFVVLDEADQMLQVGFQEDVEKILSRLPPQRQTLM----FSA 280
P R+++++ ++++ V +V+DE + G+ V+ I + + QT++ FSA
Sbjct: 254 PERLLEIVTLKGVDISNVSLLVIDELGSLCSGGYLNAVKSIKQAISSKHQTIVFNNSFSA 313
Query: 281 TMPPEIKNIIRNYLN 295
++ P +++ + +N
Sbjct: 314 SIIPAVQSFLGGSVN 328