Miyakogusa Predicted Gene

Lj6g3v0933430.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0933430.1 Non Chatacterized Hit- tr|D8S3F0|D8S3F0_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,42.41,0.000000000000006,coiled-coil,NULL;
seg,NULL,CUFF.58656.1
         (306 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G30880.1 | Symbols:  | Pleckstrin homology (PH) domain-contai...   223   1e-58
AT2G30880.2 | Symbols:  | Pleckstrin homology (PH) domain-contai...   175   4e-44

>AT2G30880.1 | Symbols:  | Pleckstrin homology (PH)
           domain-containing protein | chr2:13142926-13145718
           REVERSE LENGTH=504
          Length = 504

 Score =  223 bits (568), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 151/310 (48%), Positives = 187/310 (60%), Gaps = 11/310 (3%)

Query: 1   MQISLRNTLGMMTNKTTDGPMDDLTIMKETLLVKDEELQNFARDLRTRDSTIRDIXXXXX 60
           MQISLRN L +  NK  DGP+DDLTIMKETL VKDEEL N AR+LR+RDS I++I     
Sbjct: 180 MQISLRNALKITPNKPIDGPLDDLTIMKETLRVKDEELHNLARELRSRDSMIKEIADKLS 239

Query: 61  XXXXXXXXXXXXXHTIDEQWRNACEEIESLKKDSEKQLELSAQKLKEYEVKIISLSKEKE 120
                        HT+DEQ +  C E E L  DS++Q E +  KLKE E K  +LSKEK+
Sbjct: 240 ETAEAAVAAASAAHTMDEQRKIVCVEFERLTTDSQRQQEATKLKLKELEEKTFTLSKEKD 299

Query: 121 QLSKQREAATQEANMWRSELGKARESGVILEGXXXXXXXXXXXXXXXXXXXXXXXVQGES 180
           QL K+R+AA QEA+MWRSELGKARE  VILEG                        Q E+
Sbjct: 300 QLVKERDAALQEAHMWRSELGKARERVVILEGAVVRAEEKVRVAEASGEAKSKEASQREA 359

Query: 181 AAVSEKQELLAYVDKLKAQLQRQHIDSTEVF-EKTESCSDTKHVDL---TEENVDKACLS 236
            A +EKQELLAYV+ L+ QLQRQ +++ +V  EKTES +    + +   TE+NVDKACLS
Sbjct: 360 TAWTEKQELLAYVNMLQTQLQRQQLETKQVCEEKTESTNGEASLPMTKETEKNVDKACLS 419

Query: 237 VSRSVPDPAAAECVVQMPTDQVII--QPVGDNEWSDIQATEARXX---XXXXXXXXXXXX 291
           +SR+   P   E VV M  +QV+    PVG+NEW+DIQATEAR                 
Sbjct: 420 ISRTASIP--GENVVHMSEEQVVNAQPPVGENEWNDIQATEARVSDVREISAETERDRRN 477

Query: 292 XLDIPVISQQ 301
            LDIPV+S +
Sbjct: 478 SLDIPVVSPE 487


>AT2G30880.2 | Symbols:  | Pleckstrin homology (PH)
           domain-containing protein | chr2:13143375-13145718
           REVERSE LENGTH=381
          Length = 381

 Score =  175 bits (443), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/202 (51%), Positives = 125/202 (61%)

Query: 1   MQISLRNTLGMMTNKTTDGPMDDLTIMKETLLVKDEELQNFARDLRTRDSTIRDIXXXXX 60
           MQISLRN L +  NK  DGP+DDLTIMKETL VKDEEL N AR+LR+RDS I++I     
Sbjct: 180 MQISLRNALKITPNKPIDGPLDDLTIMKETLRVKDEELHNLARELRSRDSMIKEIADKLS 239

Query: 61  XXXXXXXXXXXXXHTIDEQWRNACEEIESLKKDSEKQLELSAQKLKEYEVKIISLSKEKE 120
                        HT+DEQ +  C E E L  DS++Q E +  KLKE E K  +LSKEK+
Sbjct: 240 ETAEAAVAAASAAHTMDEQRKIVCVEFERLTTDSQRQQEATKLKLKELEEKTFTLSKEKD 299

Query: 121 QLSKQREAATQEANMWRSELGKARESGVILEGXXXXXXXXXXXXXXXXXXXXXXXVQGES 180
           QL K+R+AA QEA+MWRSELGKARE  VILEG                        Q E+
Sbjct: 300 QLVKERDAALQEAHMWRSELGKARERVVILEGAVVRAEEKVRVAEASGEAKSKEASQREA 359

Query: 181 AAVSEKQELLAYVDKLKAQLQR 202
            A +EKQELLAYV+ L+ QLQR
Sbjct: 360 TAWTEKQELLAYVNMLQTQLQR 381