Miyakogusa Predicted Gene

Lj6g3v0927310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0927310.1 Non Chatacterized Hit- tr|I1KUS8|I1KUS8_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,45.12,0.00001,
,CUFF.58640.1
         (127 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G01690.1 | Symbols:  | ARM repeat superfamily protein | chr2:...    52   1e-07

>AT2G01690.1 | Symbols:  | ARM repeat superfamily protein |
           chr2:309144-313499 REVERSE LENGTH=743
          Length = 743

 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/28 (89%), Positives = 25/28 (89%)

Query: 100 DSYGNVQSAAQLLDRLVKDIVTESDQFS 127
           DS  NVQSAA LLDRLVKDIVTESDQFS
Sbjct: 143 DSDANVQSAAHLLDRLVKDIVTESDQFS 170