Miyakogusa Predicted Gene

Lj6g3v0922180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0922180.1 tr|G7IZY5|G7IZY5_MEDTR Citrate synthase
OS=Medicago truncatula GN=MTR_3g048920 PE=3
SV=1,90.1,0,Citrate_synt,Citrate synthase-like; seg,NULL;
CITRATE_SYNTHASE,Citrate synthase active site; no
desc,NODE_17563_length_1826_cov_136.116104.path1.1
         (516 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G42790.1 | Symbols: CSY3 | citrate synthase 3 | chr2:17803132...   806   0.0  
AT3G58750.1 | Symbols: CSY2 | citrate synthase 2 | chr3:21724564...   803   0.0  
AT3G58740.1 | Symbols: CSY1 | citrate synthase 1 | chr3:21721066...   679   0.0  
AT2G44350.1 | Symbols: ATCS, CSY4 | Citrate synthase family prot...   100   4e-21
AT2G44350.2 | Symbols: ATCS, CSY4 | Citrate synthase family prot...   100   4e-21
AT3G60100.1 | Symbols: CSY5 | citrate synthase 5 | chr3:22192888...    99   5e-21

>AT2G42790.1 | Symbols: CSY3 | citrate synthase 3 |
           chr2:17803132-17805991 REVERSE LENGTH=509
          Length = 509

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/502 (77%), Positives = 429/502 (85%), Gaps = 5/502 (0%)

Query: 20  RNRLTTLTAHLLPSSSATAFLHPLHLSAGISPPP--NLKGTLTVVDDRTGKKYIIEVSPD 77
           R RL  L+ HL      +  +     SA  S  P  +LKGTLT+VD+RTGK Y + VS D
Sbjct: 8   RARLAVLSGHLSEGKQDSPAIERWCTSADTSVAPLGSLKGTLTIVDERTGKNYKVPVSDD 67

Query: 78  GTVKATDLKKISTGKDDKGLKLYDPGYLNTAPVRSTISYIDGDEGILRYRGYPIEELADK 137
           GTVKA D KKI TGK+DKGLKLYDPGYLNTAPVRS+ISYIDGDEGILRYRGYPIEE+A+ 
Sbjct: 68  GTVKAVDFKKIVTGKEDKGLKLYDPGYLNTAPVRSSISYIDGDEGILRYRGYPIEEMAEN 127

Query: 138 STFPEVAYLIMYGNLPSESQLADWEFAISQHSAVPQGVLDIIQAMPHDAHPMGMLVNAMS 197
           STF EVAYL+MYGNLPSESQL+DWEFA+SQHSAVPQGVLDIIQ+MPHDAHPMG+LV+AMS
Sbjct: 128 STFLEVAYLLMYGNLPSESQLSDWEFAVSQHSAVPQGVLDIIQSMPHDAHPMGVLVSAMS 187

Query: 198 ALSVFHPDANPALRGLDIYNSKQVRDKQXXXXXXXXXXXXXXXNLRLVGRPPVLPSNKLS 257
           ALS+FHPDANPALRG DIY+SKQVRDKQ                LR+ GRPPVLPS  L 
Sbjct: 188 ALSIFHPDANPALRGQDIYDSKQVRDKQIIRIIGKAPTIAAAAYLRMAGRPPVLPSGNLP 247

Query: 258 YTENFLYMLDSLGNRSYKPNPRLTRALDIIFILHAEHEMNCSTSTVRHLASSGVDVYTAI 317
           Y +NFLYMLDSLGNRSYKPNPRL R LDI+FILHAEHEMNCST+  RHLASSGVDVYTA+
Sbjct: 248 YADNFLYMLDSLGNRSYKPNPRLARVLDILFILHAEHEMNCSTAAARHLASSGVDVYTAV 307

Query: 318 AGAVGALYGPLHGGANEAVLKMLSEIGTVDNIPEFIEGVKARKRKLSGFGHRVYKNYDPR 377
           AGAVGALYGPLHGGANEAVLKMLSEIGTV+NIPEFIEGVK RKRK+SGFGHRVYKNYDPR
Sbjct: 308 AGAVGALYGPLHGGANEAVLKMLSEIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPR 367

Query: 378 AKVLRKLTEEVFSIVGRDPLIEIAVALEKVALSDEYFIKRKLYPNVDFYSGLIYRAMGFP 437
           AKV++ L +EVFSIVG+DPLIE+AVALEK ALSD+YF+KRKLYPNVDFYSGLIYRAMGFP
Sbjct: 368 AKVIKNLADEVFSIVGKDPLIEVAVALEKAALSDDYFVKRKLYPNVDFYSGLIYRAMGFP 427

Query: 438 PEFFTVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYVGEWLRHYTAIKQRTV---SSN 494
           PEFFTVLFAIPRMAGYL+HW+ESLDDPDTKIMRPQQVY G WLRHYT +++R V   S  
Sbjct: 428 PEFFTVLFAIPRMAGYLSHWKESLDDPDTKIMRPQQVYTGVWLRHYTPVRERIVTDDSKE 487

Query: 495 TDKLGQLAVSNASKRRLAGSKM 516
           +DKLGQ+A SNAS+RRLAGS +
Sbjct: 488 SDKLGQVATSNASRRRLAGSSV 509


>AT3G58750.1 | Symbols: CSY2 | citrate synthase 2 |
           chr3:21724564-21727458 REVERSE LENGTH=514
          Length = 514

 Score =  803 bits (2074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/504 (76%), Positives = 430/504 (85%), Gaps = 9/504 (1%)

Query: 20  RNRLTTLTAHLLPSSSA-----TAFLHPLHLSAGISPPPN--LKGTLTVVDDRTGKKYII 72
           + RL  LTAHL  S +         + P   SA I+  P+  LKG LT+VD+RTGKKY +
Sbjct: 8   KARLAVLTAHLAVSDTVGLEQVLPAIAPWCTSAHITAAPHGSLKGNLTIVDERTGKKYQV 67

Query: 73  EVSPDGTVKATDLKKISTGKDDKGLKLYDPGYLNTAPVRSTISYIDGDEGILRYRGYPIE 132
            VS  GTVKA DLKKI+TGKDDKGLKLYDPGYLNTAPVRS+I YIDGDEGILRYRGYPIE
Sbjct: 68  PVSEHGTVKAVDLKKITTGKDDKGLKLYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIE 127

Query: 133 ELADKSTFPEVAYLIMYGNLPSESQLADWEFAISQHSAVPQGVLDIIQAMPHDAHPMGML 192
           ELA+ STF EVAYL+MYGNLPS+SQLADWEF +SQHSAVPQGVLDIIQ+MPHDAHPMG+L
Sbjct: 128 ELAESSTFIEVAYLLMYGNLPSQSQLADWEFTVSQHSAVPQGVLDIIQSMPHDAHPMGVL 187

Query: 193 VNAMSALSVFHPDANPALRGLDIYNSKQVRDKQXXXXXXXXXXXXXXXNLRLVGRPPVLP 252
           V+AMSALS+FHPDANPAL G DIY SKQVRDKQ                LR  GRPPVLP
Sbjct: 188 VSAMSALSIFHPDANPALSGQDIYKSKQVRDKQIVRILGKAPTIAAAAYLRTAGRPPVLP 247

Query: 253 SNKLSYTENFLYMLDSLGNRSYKPNPRLTRALDIIFILHAEHEMNCSTSTVRHLASSGVD 312
           S  LSY+ENFLYMLDS+GNRSYKPNPRL R LDI+FILHAEHEMNCST+  RHLASSGVD
Sbjct: 248 SANLSYSENFLYMLDSMGNRSYKPNPRLARVLDILFILHAEHEMNCSTAAARHLASSGVD 307

Query: 313 VYTAIAGAVGALYGPLHGGANEAVLKMLSEIGTVDNIPEFIEGVKARKRKLSGFGHRVYK 372
           VYTA AGAVGALYGPLHGGANEAVLKML+EIGT +NIP+FIEGVK RKRK+SGFGHRVYK
Sbjct: 308 VYTACAGAVGALYGPLHGGANEAVLKMLAEIGTAENIPDFIEGVKNRKRKMSGFGHRVYK 367

Query: 373 NYDPRAKVLRKLTEEVFSIVGRDPLIEIAVALEKVALSDEYFIKRKLYPNVDFYSGLIYR 432
           NYDPRAKV++KL +EVFSIVGRDPLIE+AVALEK ALSDEYF+KRKLYPNVDFYSGLIYR
Sbjct: 368 NYDPRAKVIKKLADEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYR 427

Query: 433 AMGFPPEFFTVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYVGEWLRHYTAIKQRTVS 492
           AMGFPPEFFTVLFA+PRMAGYL+HWRESLDDPDT+IMRPQQ Y G W+RHY  +++RT+S
Sbjct: 428 AMGFPPEFFTVLFAVPRMAGYLSHWRESLDDPDTRIMRPQQAYTGVWMRHYEPVRERTLS 487

Query: 493 SNT--DKLGQLAVSNASKRRLAGS 514
           S++  DK GQ+++SNAS+RRLAGS
Sbjct: 488 SDSDKDKFGQVSISNASRRRLAGS 511


>AT3G58740.1 | Symbols: CSY1 | citrate synthase 1 |
           chr3:21721066-21723726 REVERSE LENGTH=480
          Length = 480

 Score =  679 bits (1753), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/480 (67%), Positives = 383/480 (79%), Gaps = 8/480 (1%)

Query: 15  MDDASRNRLTTLTAHLLPSSSATAF--LHPLHLSAGISPPPN--LKGTLTVVDDRTGKKY 70
           + + +R RL  L AHL  S        + P   SA I+  P+  LKG L +VD+RTG +Y
Sbjct: 3   ISERARARLAVLNAHLTVSEPNQVLPAIEPWCTSAHITAAPHGSLKGNLKIVDERTGNEY 62

Query: 71  IIEVSPDGTVKATDLKKISTGKDDKGLKLYDPGYLNTAPVRSTISYIDGDEGILRYRGYP 130
            + VS  GTVK  DLKKI+TGKDDKGL LYDPGYLNTAPVRS+ISYIDGDEGILRYRGYP
Sbjct: 63  QVPVSEHGTVKTVDLKKITTGKDDKGLNLYDPGYLNTAPVRSSISYIDGDEGILRYRGYP 122

Query: 131 IEELADKSTFPEVAYLIMYGNLPSESQLADWEFAISQHSAVPQGVLDIIQAMPHDAHPMG 190
           +EELA+KST+ EV YL++YGNLPS+ QLADWEFAISQ+SAVPQGVLD+IQ+MP+D HP+G
Sbjct: 123 VEELAEKSTYTEVTYLLIYGNLPSQRQLADWEFAISQNSAVPQGVLDMIQSMPNDVHPVG 182

Query: 191 MLVNAMSALSVFHPDANPALRGLDIYNSKQVRDKQXXXXXXXXXXXXXXXNLRLVGRPPV 250
            LV AMSALS+F+PDANP+L GL +Y SKQVRDKQ                LR  G+PPV
Sbjct: 183 ALVTAMSALSIFYPDANPSLMGLGVYKSKQVRDKQIVRVLGQAPTIAAAAYLRKAGKPPV 242

Query: 251 LPSNKLSYTENFLYMLDSLGNRSYKPNPRLTRALDIIFILHAEHEMNCSTSTVRHLASSG 310
            P + LSY+ENFLYM++S+G+RSYKPNPRL R LDI+FIL AEHEMNCST+  RHL+SSG
Sbjct: 243 QPLSNLSYSENFLYMVESMGDRSYKPNPRLARVLDILFILQAEHEMNCSTAAARHLSSSG 302

Query: 311 VDVYTAIAGAVGALYGPLHGGANEAVLKMLSEIGTVDNIPEFIEGVKARKRKLSGFGHRV 370
            DVYTA++G VGA+YGPLHGGA EA + MLSEIGTV+NIPEFIE VK +KR+LSGFGHR+
Sbjct: 303 GDVYTAVSGGVGAIYGPLHGGAVEATINMLSEIGTVENIPEFIESVKNKKRRLSGFGHRI 362

Query: 371 YKNYDPRAKVLRKLTEEVFSIVGRDPLIEIAVALEKVALSDEYFIKRKLYPNVDFYSGLI 430
           YKNYDPR KV++KL +EVFSI+GRDPL+E+  ALEK ALSDEYF+KRKLYPNVDFYSGLI
Sbjct: 363 YKNYDPRGKVVKKLADEVFSILGRDPLVEVGDALEKAALSDEYFVKRKLYPNVDFYSGLI 422

Query: 431 YRAMGFPPEFFTVLFAIPRMAGYLAHWRESLDDPDTKIMRPQQVYVGEWLRHYTAIKQRT 490
            RAMG P  F     A+ R+AGYL+HWRESLDDPDTKIMRPQQVY G  +RHY  +++RT
Sbjct: 423 NRAMGIPSSF----TAVSRIAGYLSHWRESLDDPDTKIMRPQQVYTGAGIRHYETVRERT 478


>AT2G44350.1 | Symbols: ATCS, CSY4 | Citrate synthase family protein
           | chr2:18316673-18320524 FORWARD LENGTH=473
          Length = 473

 Score = 99.8 bits (247), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 176/408 (43%), Gaps = 68/408 (16%)

Query: 115 SYIDGDEGILRYRGYPIEEL--------ADKSTFPE-VAYLIMYGNLPSESQLADWEFAI 165
           S +D +EGI R+RG  I E         +     PE + +L++ G +PS+ Q+      +
Sbjct: 90  SLLDPEEGI-RFRGLSIPECQKVLPTAQSGAEPLPEGLLWLLLTGKVPSKEQVEALSKDL 148

Query: 166 SQHSAVPQGVLDIIQAMPHDAHPMGMLVNAMSALSVFHPDANPALRGLDIYNSKQVRDKQ 225
           +  +AVP  V + I A+P  AHPM    + + AL V          G  I+ SK      
Sbjct: 149 ANRAAVPDYVYNAIDALPSTAHPMTQFASGVMALQVQSEFQKAYENG--IHKSK------ 200

Query: 226 XXXXXXXXXXXXXXXNLRLVGRPPV---------------LPSNK-LSYTENFLYMLDSL 269
                           L L+ R PV               +PS+K L Y  NF +ML   
Sbjct: 201 -------FWEPTYEDCLNLIARVPVVAAYVYRRMYKNGDSIPSDKSLDYGANFSHMLGF- 252

Query: 270 GNRSYKPNPRLTRALDIIFILHAEHEMNCSTSTVRHLASSGV-DVYTAIAGAVGALYGPL 328
                  + ++   + +   +H++HE    ++   HL  S + D Y + A A+  L GPL
Sbjct: 253 ------DDEKVKELMRLYITIHSDHEGGNVSAHTGHLVGSALSDPYLSFAAALNGLAGPL 306

Query: 329 HGGANEAVL----KMLSEIG---TVDNIPEFIEGVKARKRKLSGFGHRVYKNYDPRAKVL 381
           HG AN+ VL     ++ E G   + + + E++       + + G+GH V +N DPR    
Sbjct: 307 HGLANQEVLLWIKSVVEECGEDISKEQLKEYVWKTLNSGKVIPGYGHGVLRNTDPRYVCQ 366

Query: 382 RKLTEEVFSIVGRDPLIEIAVALEKVA--LSDEYFIKRKLYPNVDFYSGLIYRAMGF-PP 438
           R   E     +  DPL ++   L +V   +  E    +  +PNVD +SG++    G    
Sbjct: 367 R---EFALKHLPDDPLFQLVSKLYEVVPPVLTELGKVKNPWPNVDAHSGVLLNHYGLTEA 423

Query: 439 EFFTVLFAIPRMAGYLAH--WRESLDDPDTKIMRPQQVYVGEWLRHYT 484
            ++TVLF + R  G  +   W  +L      + RP+ V + +WL  + 
Sbjct: 424 RYYTVLFGVSRSLGICSQLIWDRAL---GLALERPKSVTM-DWLEAHC 467


>AT2G44350.2 | Symbols: ATCS, CSY4 | Citrate synthase family protein
           | chr2:18316673-18320524 FORWARD LENGTH=474
          Length = 474

 Score = 99.8 bits (247), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 176/408 (43%), Gaps = 68/408 (16%)

Query: 115 SYIDGDEGILRYRGYPIEEL--------ADKSTFPE-VAYLIMYGNLPSESQLADWEFAI 165
           S +D +EGI R+RG  I E         +     PE + +L++ G +PS+ Q+      +
Sbjct: 91  SLLDPEEGI-RFRGLSIPECQKVLPTAQSGAEPLPEGLLWLLLTGKVPSKEQVEALSKDL 149

Query: 166 SQHSAVPQGVLDIIQAMPHDAHPMGMLVNAMSALSVFHPDANPALRGLDIYNSKQVRDKQ 225
           +  +AVP  V + I A+P  AHPM    + + AL V          G  I+ SK      
Sbjct: 150 ANRAAVPDYVYNAIDALPSTAHPMTQFASGVMALQVQSEFQKAYENG--IHKSK------ 201

Query: 226 XXXXXXXXXXXXXXXNLRLVGRPPV---------------LPSNK-LSYTENFLYMLDSL 269
                           L L+ R PV               +PS+K L Y  NF +ML   
Sbjct: 202 -------FWEPTYEDCLNLIARVPVVAAYVYRRMYKNGDSIPSDKSLDYGANFSHMLGF- 253

Query: 270 GNRSYKPNPRLTRALDIIFILHAEHEMNCSTSTVRHLASSGV-DVYTAIAGAVGALYGPL 328
                  + ++   + +   +H++HE    ++   HL  S + D Y + A A+  L GPL
Sbjct: 254 ------DDEKVKELMRLYITIHSDHEGGNVSAHTGHLVGSALSDPYLSFAAALNGLAGPL 307

Query: 329 HGGANEAVL----KMLSEIG---TVDNIPEFIEGVKARKRKLSGFGHRVYKNYDPRAKVL 381
           HG AN+ VL     ++ E G   + + + E++       + + G+GH V +N DPR    
Sbjct: 308 HGLANQEVLLWIKSVVEECGEDISKEQLKEYVWKTLNSGKVIPGYGHGVLRNTDPRYVCQ 367

Query: 382 RKLTEEVFSIVGRDPLIEIAVALEKVA--LSDEYFIKRKLYPNVDFYSGLIYRAMGF-PP 438
           R   E     +  DPL ++   L +V   +  E    +  +PNVD +SG++    G    
Sbjct: 368 R---EFALKHLPDDPLFQLVSKLYEVVPPVLTELGKVKNPWPNVDAHSGVLLNHYGLTEA 424

Query: 439 EFFTVLFAIPRMAGYLAH--WRESLDDPDTKIMRPQQVYVGEWLRHYT 484
            ++TVLF + R  G  +   W  +L      + RP+ V + +WL  + 
Sbjct: 425 RYYTVLFGVSRSLGICSQLIWDRAL---GLALERPKSVTM-DWLEAHC 468


>AT3G60100.1 | Symbols: CSY5 | citrate synthase 5 |
           chr3:22192888-22196246 FORWARD LENGTH=464
          Length = 464

 Score = 99.4 bits (246), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 178/412 (43%), Gaps = 72/412 (17%)

Query: 115 SYIDGDEGILRYRGYPIEEL--------ADKSTFPE-VAYLIMYGNLPSESQLADWEFAI 165
           S +D DEGI R+RG  I E         + +   PE + +L++ G +P++ Q       +
Sbjct: 87  SLLDADEGI-RFRGMSIPECQKILPSAESGEEPLPESLLWLLLTGKVPTKEQANALSTEL 145

Query: 166 SQHSAVPQGVLDIIQAMPHDAHPMGMLVNAMSALSVFHPDANPALRGLDIYNSKQVRDKQ 225
           +  +AVP      I A+P  AHPM    + + AL V   +   A    DI  SK      
Sbjct: 146 AHRAAVPA-----IDALPSTAHPMTQFASGVMALQV-QSEFQKAYEQGDISKSK------ 193

Query: 226 XXXXXXXXXXXXXXXNLRLVGRPPVLPS----------------NKLSYTENFLYMLDSL 269
                           L L+ R PV+ S                + L Y  NF +ML   
Sbjct: 194 -------YWEPTFEDALNLIARVPVVASYVYRRMYKDGSIIPLDDSLDYGANFSHMLGF- 245

Query: 270 GNRSYKPNPRLTRALDIIFILHAEHEMNCSTSTVRHLASSGV-DVYTAIAGAVGALYGPL 328
                  +P++   + +   +H++HE    ++   HL  S + D Y + A A+  L GPL
Sbjct: 246 ------DSPQMKELMRLYVTIHSDHEGGNVSAHAGHLVGSALSDPYLSFAAALNGLAGPL 299

Query: 329 HGGANEAVL----KMLSEIG---TVDNIPEFIEGVKARKRKLSGFGHRVYKNYDPRAKVL 381
           HG AN+ VL     ++ E G   + + + +++       + + G+GH V +  DPR    
Sbjct: 300 HGLANQEVLLWIKLVVEECGESISKEQLKDYVWKTLNSGKVVPGYGHGVLRKTDPRYICQ 359

Query: 382 RKLTEEVFSIVGRDPLIEIAVALEKVA--LSDEYFIKRKLYPNVDFYSGLIYRAMGF-PP 438
           R   E     +  DPL ++   L +V   +  E    +  +PNVD +SG++    G    
Sbjct: 360 R---EFALKHLPDDPLFQLVSKLYEVVPPILTELGKVKNPWPNVDAHSGVLLNYYGLTEA 416

Query: 439 EFFTVLFAIPRMAGYLAH--WRESLDDPDTKIMRPQQVYVGEWLRHYTAIKQ 488
            ++TVLF + R  G  +   W  +L  P   + RP+ V + +WL ++T + +
Sbjct: 417 RYYTVLFGVSRSLGICSQLIWDRALGLP---LERPKSVNM-DWLDNFTRLNR 464