Miyakogusa Predicted Gene
- Lj6g3v0922040.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0922040.1 tr|I1KY45|I1KY45_SOYBN Glutamyl-tRNA(Gln)
amidotransferase subunit A, chloroplastic/mitochondrial
OS,92.77,0,AMIDASES,Amidase, conserved site; GLUTAMYL-TRNA(GLN)
AMIDOTRANSFERASE SUBUNIT A,NULL;
AMIDASE,Amidas,NODE_29426_length_1645_cov_113.161705.path1.1
(416 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G25660.1 | Symbols: | Amidase family protein | chr3:9339640-... 657 0.0
AT5G64440.1 | Symbols: AtFAAH, FAAH | fatty acid amide hydrolase... 118 9e-27
AT1G08980.1 | Symbols: ATAMI1, AMI1, ATTOC64-I, TOC64-I | amidas... 76 5e-14
AT5G07360.1 | Symbols: | Amidase family protein | chr5:2326925-... 75 9e-14
AT5G07360.2 | Symbols: | Amidase family protein | chr5:2326925-... 72 9e-13
AT5G09420.1 | Symbols: ATTOC64-V, MTOM64, TOC64-V, OM64, AtmtOM6... 69 8e-12
AT3G17970.1 | Symbols: atToc64-III, TOC64-III | translocon at th... 68 1e-11
AT4G34880.1 | Symbols: | Amidase family protein | chr4:16615549... 64 2e-10
>AT3G25660.1 | Symbols: | Amidase family protein |
chr3:9339640-9342044 REVERSE LENGTH=537
Length = 537
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/412 (78%), Positives = 359/412 (87%)
Query: 1 MPSTGGSRILDGYRPPFDATAVKRVKELGGIVVGKTNLDEFGMGSTTEASAFQVTANPWD 60
MPST SRIL+ YRPPFDATAVK++KELGGIVVGKTN+DEFGMGSTTEASAFQVTANPWD
Sbjct: 124 MPSTAASRILEHYRPPFDATAVKKIKELGGIVVGKTNMDEFGMGSTTEASAFQVTANPWD 183
Query: 61 VSRVPXXXXXXXXXXXXXRQCVVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRFGLMAY 120
+SRVP RQC+VSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRFGLMAY
Sbjct: 184 LSRVPGGSSGGSAAAVAARQCMVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRFGLMAY 243
Query: 121 ASSLDAIGCFGSSVADAGILLHAIAGHDRFDATSSKQDVPNFLSNFVPASSLESKPLKGL 180
ASSLD IGCFGS+VADAG+LLHAI+G+DRFD+TSSKQDVP F S F+ ESKPL G+
Sbjct: 244 ASSLDVIGCFGSTVADAGMLLHAISGYDRFDSTSSKQDVPEFQSQFLSVDHFESKPLNGV 303
Query: 181 KVGLIRETIDEGVDAGVISAVRAAALHFEELGCSVNEVSLPSFSLGLPAYYILALSESSS 240
KVG+IRET+++GVD+GV SA + AA H E LGC + EVSLPSFSLGLPAYY++A SESSS
Sbjct: 304 KVGIIRETLEDGVDSGVRSATQEAASHLEALGCILTEVSLPSFSLGLPAYYVIASSESSS 363
Query: 241 NLSRYDGIRYGNQVYADELDSLYGDSRAKGLGSEVKMRILMGTYALSAGYYDAYYKRAQQ 300
NLSRYDG+RYGNQV A+EL+ LY SR +G G EVKMRILMGTYALSAGYYDAYYKRAQQ
Sbjct: 364 NLSRYDGVRYGNQVMAEELNKLYECSRGEGFGGEVKMRILMGTYALSAGYYDAYYKRAQQ 423
Query: 301 VRTIIKNSFKEALSQNDILISPAAPSAAYKIGEKKNDPLAMYAGDIMTVNVNLAGLPALV 360
VRT+I+ FK AL QNDILISPAAPSAAYKIGEKK+DPLAMYAGDIMTVNVNLAGLPA+V
Sbjct: 424 VRTLIRKDFKAALEQNDILISPAAPSAAYKIGEKKDDPLAMYAGDIMTVNVNLAGLPAMV 483
Query: 361 LPCGFVEGGSAGLPVGLQMIGGAFDEGELLRVGHIFEQTLGNGSFVPPIVAD 412
LPCG VEGG +GLPVGLQMIG AFDE +LL+VGHIFEQTL SFVPP++A+
Sbjct: 484 LPCGLVEGGPSGLPVGLQMIGAAFDEEKLLKVGHIFEQTLKGSSFVPPLLAN 535
>AT5G64440.1 | Symbols: AtFAAH, FAAH | fatty acid amide hydrolase |
chr5:25766229-25770260 FORWARD LENGTH=607
Length = 607
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 175/412 (42%), Gaps = 51/412 (12%)
Query: 2 PSTGGSRILDGYRP-PFDATAVKRVKELGGIVVGKTNLDEFGMGSTTEASAFQVTANPWD 60
P+ GG+ L R D+ V +++ G I++GK N+ E GMG+T S + T NP D
Sbjct: 214 PTNGGTTWLHEDRSVEKDSAVVSKLRSCGAILLGKANMHELGMGTTGNNSNYGTTRNPHD 273
Query: 61 VSRVPXXXXXXXXXXXXXRQCVVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRFGLMAY 120
R C +LG+D GGSVR P++ CG+ GLK TYGR G +
Sbjct: 274 PKRYTGGSSSGSAAIVAAGLCSAALGTDGGGSVRIPSALCGITGLKTTYGRTDMTGSLCE 333
Query: 121 ASSLDAIGCFGSSVADAGILLHAIAGH---DRFDATSSKQDVPNFLSNFVPASSLESKPL 177
+++ IG SS+ DA ++ AI G DR++ S P LS+ S +
Sbjct: 334 GGTVEIIGPLASSLEDAFLVYAAILGSSSADRYNLKPSPPCFPKLLSHN------GSNAI 387
Query: 178 KGLKVGLIRETIDEGVDAGVISAVRAAALHF--EELGCSVNEVSLPSFSLGLPAYYILAL 235
L++G + ++ V + IS L GC V E+ +P A+ I
Sbjct: 388 GSLRLGKYTKWFND-VSSSDISDKCEDILKLLSNNHGCKVVEIVVPELEEMRAAHVISIG 446
Query: 236 SESSSNLSRYDGIRYGNQVYADELDSLYGDSRAKGLGSEVKMRILMGTYALSAGYYDAYY 295
S + S+L+ Y A + L D+R ++A+ + + Y
Sbjct: 447 SPTLSSLTPY--------CEAGKNSKLSYDTRT--------------SFAIFRSFSASDY 484
Query: 296 KRAQQVRTIIKNSFKEALSQNDILISPAA-------PSAAYKIGEKKNDPLAMYAGDIM- 347
AQ +R + D++++P P A K GE D+M
Sbjct: 485 IAAQCLRRRLMEYHLNIFKDVDVIVTPTTGMTAPVIPPDALKNGETN----IQVTTDLMR 540
Query: 348 -TVNVNLAGLPALVLPCGFVEGGSAGLPVGLQMIGGAFDEGELLRVGHIFEQ 398
+ NL G PA+ +P G+ GLP+GLQ++G + E +L + E+
Sbjct: 541 FVLAANLLGFPAISVPVGY---DKEGLPIGLQIMGRPWAEATVLGLAAAVEE 589
>AT1G08980.1 | Symbols: ATAMI1, AMI1, ATTOC64-I, TOC64-I | amidase 1
| chr1:2884455-2886430 FORWARD LENGTH=425
Length = 425
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 55/117 (47%)
Query: 19 ATAVKRVKELGGIVVGKTNLDEFGMGSTTEASAFQVTANPWDVSRVPXXXXXXXXXXXXX 78
A V + E G +G T +DE E + + NP RVP
Sbjct: 64 APVVSSLLEAGATALGITIMDEMAYSINGENAHYGTPRNPIAFDRVPGGSSSGSAVAVAA 123
Query: 79 RQCVVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRFGLMAYASSLDAIGCFGSSVA 135
R S+G+DTGGSVR PAS+CG+ G +P++G VS GL A S D +G F A
Sbjct: 124 RLVDFSIGTDTGGSVRVPASYCGIFGFRPSHGAVSTVGLTPMAQSFDTVGWFARDTA 180
>AT5G07360.1 | Symbols: | Amidase family protein |
chr5:2326925-2330011 REVERSE LENGTH=659
Length = 659
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 13/145 (8%)
Query: 17 FDATAVKRVKELGGIVVGK-----TNLDEFGMGSTTEASAFQVTANPWDVSRVPXXXXXX 71
+A KR+K G ++V K D+ G T NPW++
Sbjct: 300 IEAWVYKRLKASGAVLVAKLVTGSMAYDDIWFGGRTR--------NPWNIEEFSTGSSAG 351
Query: 72 XXXXXXXRQCVVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRFGLMAYASSLDAIGCFG 131
++GS+T GS+ PA+ CG+ L+PT+G V R G+M+ + SLD +G F
Sbjct: 352 PAASTSAGMVPFAIGSETAGSMTYPAARCGITALRPTFGSVGRTGVMSISESLDKLGPFC 411
Query: 132 SSVADAGILLHAIAGHDRFDATSSK 156
+ AD ++L AI G D D +S +
Sbjct: 412 RTAADCAVILDAIKGKDPDDLSSRE 436
>AT5G07360.2 | Symbols: | Amidase family protein |
chr5:2326925-2330011 REVERSE LENGTH=652
Length = 652
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 17 FDATAVKRVKELGGIVVGK-----TNLDEFGMGSTTEASAFQVTANPWDVSRVPXXXXXX 71
+A KR+K G ++V K D+ G T NPW++
Sbjct: 300 IEAWVYKRLKASGAVLVAKLVTGSMAYDDIWFGGRTR--------NPWNIEEFSTGSSAG 351
Query: 72 XXXXXXXRQCVVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRFGLMAYASSLDAIGCFG 131
S GS+T GS+ PA+ CG+ L+PT+G V R G+M+ + SLD +G F
Sbjct: 352 PAAS-------TSAGSETAGSMTYPAARCGITALRPTFGSVGRTGVMSISESLDKLGPFC 404
Query: 132 SSVADAGILLHAIAGHDRFDATSSK 156
+ AD ++L AI G D D +S +
Sbjct: 405 RTAADCAVILDAIKGKDPDDLSSRE 429
>AT5G09420.1 | Symbols: ATTOC64-V, MTOM64, TOC64-V, OM64, AtmtOM64 |
translocon at the outer membrane of chloroplasts 64-V |
chr5:2928316-2931750 FORWARD LENGTH=603
Length = 603
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 148/374 (39%), Gaps = 51/374 (13%)
Query: 19 ATAVKRVKELGGIVVGKTNLDEFGMGSTTEASAFQVTANPWDVSRVPXXXXXXXXXXXXX 78
A V + + G VGKT +DE G G E + NP VP
Sbjct: 107 AVVVTTLLKNGATCVGKTIMDELGFGIIGENKHYGTPINPLMPDNVPGGCSSGSAVSVGA 166
Query: 79 RQCVVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRFGLMAYASSLDAIGCFGSSVADAG 138
SLG DT G VR PA+FCG++G +P+ G VS G++ + SL+ +G F S D
Sbjct: 167 ELVDFSLGIDTTGGVRVPAAFCGILGFRPSQGTVSSVGVLPNSQSLETVGWFAS---DPS 223
Query: 139 ILLHAIAGHDRFD---ATSSKQDVPNFLSNFVPASSLESKPLKGLKVGLIRETID----- 190
+L GH + T +Q F + S + K V ++R+ I+
Sbjct: 224 VLCQ--VGHALLNLSAVTHRRQRSLIFADDLFELSDIP----KQKSVQVVRKAIENLSGY 277
Query: 191 ---EGVDAG--VISAVRAAALHFEELGCSVNEVSLPSFSLGLPAYYILALSESSSNLSRY 245
+ V+ G V S V + A E+ G S N S + ALS + R+
Sbjct: 278 KTPKHVNVGQYVASNVPSLAEFCEQSGKSQNSAST-----------LRALSSVMLAIQRH 326
Query: 246 DGIRYGNQVYADELDSLYGDSRAKGLGSEVKMRILMGTYALSAGYYDAYYKRAQQVRTII 305
+ + ++ + S G + + + +K + + K +V+ +
Sbjct: 327 E-FKTNHEEWWQTCKSFLGPRFSNDVVTALKSK-------------NESIKSLYRVKNEM 372
Query: 306 KNSFKEALSQNDILISPAAPSAAYKIGEKKNDPLAMYAGDIMTVNV--NLAGLPALVLPC 363
+ + + L ++ IL+ P ++ K+N L + ++ +++G + +P
Sbjct: 373 RATIQSLLKEDGILVIPTVADPPPRLNTKRNKSLNEFLDRTYALSCIASMSGCCQVTIPL 432
Query: 364 GFVEGGSAGLPVGL 377
G E G + V L
Sbjct: 433 G--EHGDRPISVSL 444
>AT3G17970.1 | Symbols: atToc64-III, TOC64-III | translocon at the
outer membrane of chloroplasts 64-III |
chr3:6148030-6151794 FORWARD LENGTH=589
Length = 589
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 53/105 (50%)
Query: 27 ELGGIVVGKTNLDEFGMGSTTEASAFQVTANPWDVSRVPXXXXXXXXXXXXXRQCVVSLG 86
E G VGKT +DEF + E + NP +R+P +LG
Sbjct: 102 EGGATCVGKTVVDEFAFSISGENKHYDSPTNPAAPTRIPGGACSGAAVAVATNAVDFALG 161
Query: 87 SDTGGSVRQPASFCGVVGLKPTYGRVSRFGLMAYASSLDAIGCFG 131
DT G VR PA +CGV+G K +YG +S G++ +SSLD++G F
Sbjct: 162 IDTVGGVRVPAGYCGVLGFKSSYGAISNTGIIPVSSSLDSVGWFA 206
>AT4G34880.1 | Symbols: | Amidase family protein |
chr4:16615549-16617424 FORWARD LENGTH=466
Length = 466
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 163/416 (39%), Gaps = 105/416 (25%)
Query: 1 MPSTGGSRILDGYRPPFDATAVKRVKELGGIVVGKTNLDEFGMGSTTEASAFQVTANP-- 58
+ +T GS L G DA VKR++E G +++GK +L E+ + F+ + P
Sbjct: 126 LNTTAGSFALLGSVVARDAGVVKRLRESGAVILGKASLSEW--------AHFRSFSIPDG 177
Query: 59 WDVSRVPXXXXXXXXXXXXXRQCVVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRFGLM 118
W S VVG+KP+ G SR G++
Sbjct: 178 WSA-----------------------------------PSQNSVVGIKPSVGLTSRAGVV 202
Query: 119 AYASSLDAIGCFGSSVADAGILLHAIAGHDRFDATSSKQDVPNFLSNFVP----ASSLES 174
+ D+IG +V+DA LL AI G+D D + S F+P L +
Sbjct: 203 PISLRQDSIGPICRTVSDAVHLLDAIVGYDPLDEATKTA------SEFIPEGGYKQFLTT 256
Query: 175 KPLKGLKVGLIRETIDEGVDAGVISAVRAAALHFEELGCSVNEVS------------LPS 222
LKG ++G++ + +D + + R A+ L EV L
Sbjct: 257 SGLKGKRLGIVMKH-SSLLDHHIKTLRREGAIVINNLTIPNIEVIVGGTDSGEEIALLAE 315
Query: 223 FSLGLPAYYILALSESSSNLSRYDGIRYGNQVYADELDSLYGDSRAKGLGSEVKMRILMG 282
F + L AY + +L+ D I Y N+ +A++ + K G EV +
Sbjct: 316 FKMSLNAYLKELVKSPVRSLA--DVIAY-NEEFAEQ-------EKVKEWGQEVFL----- 360
Query: 283 TYALSAGYYDAYYKRAQQVRTIIKNSFKEALSQNDILISPAAPSAAYKIGEKKNDPLAMY 342
T ++G + Q+++ + +N ++ + +N K D +
Sbjct: 361 TAEATSGMGEKEKTALQKMKELSRNGIEKLIEEN------------------KLDAIVTL 402
Query: 343 AGDIMTVNVNLAGLPALVLPCGFVEGGSAGLPVGLQMIGGAFDEGELLRVGHIFEQ 398
D+ +V + + G P + +P G+ S G+P G+ G F E +L+ + FEQ
Sbjct: 403 GSDLSSV-LAIGGYPGINVPAGY---DSGGVPYGISFGGLRFSEPKLIEIAFAFEQ 454