Miyakogusa Predicted Gene
- Lj6g3v0920600.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0920600.1 Non Chatacterized Hit- tr|A9PFQ8|A9PFQ8_POPTR
Putative uncharacterized protein OS=Populus
trichocarp,69.64,9e-17,CYCLIC NUCLEOTIDE GATED CHANNEL,NULL; VOLTAGE
AND LIGAND GATED POTASSIUM CHANNEL,NULL,CUFF.58554.1
(153 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G17690.1 | Symbols: ATCNGC19, CNGC19 | cyclic nucleotide gate... 156 5e-39
AT3G17700.1 | Symbols: CNBT1, CNGC20, ATCNGC20 | cyclic nucleoti... 143 4e-35
AT1G19780.1 | Symbols: ATCNGC8, CNGC8 | cyclic nucleotide gated ... 74 3e-14
AT5G57940.2 | Symbols: ATCNGC5, CNGC5 | cyclic nucleotide gated ... 73 7e-14
AT5G57940.1 | Symbols: ATCNGC5, CNGC5 | cyclic nucleotide gated ... 73 7e-14
AT5G57940.3 | Symbols: ATCNGC5, CNGC5 | cyclic nucleotide gated ... 73 7e-14
AT1G15990.1 | Symbols: ATCNGC7, CNGC7 | cyclic nucleotide gated ... 73 9e-14
AT4G30560.1 | Symbols: ATCNGC9, CNGC9 | cyclic nucleotide gated ... 72 1e-13
AT4G30560.2 | Symbols: CNGC9 | cyclic nucleotide gated channel 9... 72 1e-13
AT2G23980.1 | Symbols: ATCNGC6, CNGC6 | cyclic nucleotide-gated ... 72 1e-13
AT2G24610.1 | Symbols: ATCNGC14, CNGC14 | cyclic nucleotide-gate... 70 4e-13
AT5G53130.1 | Symbols: CNGC1, ATCNGC1 | cyclic nucleotide gated ... 70 5e-13
AT5G14870.1 | Symbols: CNGC18, ATCNGC18 | cyclic nucleotide-gate... 69 9e-13
AT2G28260.1 | Symbols: ATCNGC15, CNGC15 | cyclic nucleotide-gate... 67 3e-12
AT4G01010.1 | Symbols: ATCNGC13, CNGC13 | cyclic nucleotide-gate... 67 4e-12
AT4G30360.1 | Symbols: ATCNGC17, CNGC17 | cyclic nucleotide-gate... 66 1e-11
AT1G01340.1 | Symbols: ATCNGC10, CNGC10, ACBK1 | cyclic nucleoti... 65 1e-11
AT1G01340.2 | Symbols: CNGC10 | cyclic nucleotide gated channel ... 65 1e-11
AT3G48010.1 | Symbols: ATCNGC16, CNGC16 | cyclic nucleotide-gate... 63 6e-11
AT2G46440.1 | Symbols: ATCNGC11, CNGC11 | cyclic nucleotide-gate... 58 2e-09
AT5G54250.3 | Symbols: CNGC4 | cyclic nucleotide-gated cation ch... 57 5e-09
AT5G54250.2 | Symbols: ATCNGC4, CNGC4, HLM1, DND2 | cyclic nucle... 57 6e-09
AT5G54250.1 | Symbols: ATCNGC4, CNGC4, HLM1, DND2 | cyclic nucle... 57 6e-09
AT2G46430.2 | Symbols: ATCNGC3, CNGC3, CNGC3.C | cyclic nucleoti... 57 7e-09
AT2G46430.1 | Symbols: ATCNGC3, CNGC3, CNGC3.C | cyclic nucleoti... 57 7e-09
AT5G15410.1 | Symbols: DND1, ATCNGC2, CNGC2 | Cyclic nucleotide-... 53 8e-08
AT5G15410.2 | Symbols: DND1, ATCNGC2, CNGC2 | Cyclic nucleotide-... 53 8e-08
AT2G46450.1 | Symbols: ATCNGC12, CNGC12 | cyclic nucleotide-gate... 49 2e-06
AT2G46450.2 | Symbols: CNGC12 | cyclic nucleotide-gated channel ... 49 2e-06
AT2G46450.3 | Symbols: CNGC12 | cyclic nucleotide-gated channel ... 49 2e-06
>AT3G17690.1 | Symbols: ATCNGC19, CNGC19 | cyclic nucleotide gated
channel 19 | chr3:6045382-6048339 FORWARD LENGTH=729
Length = 729
Score = 156 bits (395), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 74/116 (63%), Positives = 96/116 (82%), Gaps = 2/116 (1%)
Query: 33 EYGTRMPLSEGDACGEELMTWYLEHSSVSSDGRKVRLPGQRLVSNRTVNCLTNVEAFSLS 92
E G+ +PLSEGD CGEEL+TW L SS++ DG ++++P + LVSNR V C+TNVEAFSLS
Sbjct: 610 EDGSVLPLSEGDVCGEELLTWCL--SSINPDGTRIKMPPKGLVSNRNVRCVTNVEAFSLS 667
Query: 93 AADLEEVTILFTRFLRRPQVQGALRYESPYWRSLAANRIQVAWRYRQKRLSRVNSS 148
ADLE+VT LF+RFLR +VQGA+RYESPYWR AA +IQVAWRYR+++L R+N++
Sbjct: 668 VADLEDVTSLFSRFLRSHRVQGAIRYESPYWRLRAAMQIQVAWRYRKRQLQRLNTA 723
>AT3G17700.1 | Symbols: CNBT1, CNGC20, ATCNGC20 | cyclic
nucleotide-binding transporter 1 | chr3:6049074-6052449
FORWARD LENGTH=764
Length = 764
Score = 143 bits (361), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 67/103 (65%), Positives = 84/103 (81%)
Query: 33 EYGTRMPLSEGDACGEELMTWYLEHSSVSSDGRKVRLPGQRLVSNRTVNCLTNVEAFSLS 92
E G+ +PL EGD CGEEL+TW LE SSV+ DG ++R+P + L+S+R V C+TNVEAFSLS
Sbjct: 643 EDGSVLPLYEGDVCGEELLTWCLERSSVNPDGTRIRMPSKGLLSSRNVRCVTNVEAFSLS 702
Query: 93 AADLEEVTILFTRFLRRPQVQGALRYESPYWRSLAANRIQVAW 135
ADLE+VT LF+RFLR +VQGA+RY+SPYWR AA +IQVAW
Sbjct: 703 VADLEDVTSLFSRFLRSHRVQGAIRYDSPYWRLRAARQIQVAW 745
>AT1G19780.1 | Symbols: ATCNGC8, CNGC8 | cyclic nucleotide gated
channel 8 | chr1:6833885-6836578 REVERSE LENGTH=753
Length = 753
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 68/130 (52%), Gaps = 16/130 (12%)
Query: 12 ICRETLDAISSDLLRKKIILPEYGTRMPLSEGDACGEELMTWYLEHSSVSSDGRKVRLPG 71
I R L+++++D R R L EGD CGEEL+TW L+ + S+ LP
Sbjct: 548 IIRGRLESVTTDGGRSGFF-----NRGLLKEGDFCGEELLTWALDPKAGSN------LPS 596
Query: 72 QRLVSNRTVNCLTNVEAFSLSAADLEEVTILFTRFLRRPQVQGALRYESPYWRSLAANRI 131
S RTV LT VEAF+L A +L+ V F R R QVQ R+ S WR+ AA I
Sbjct: 597 ----STRTVKALTEVEAFALEAEELKFVASQFRRLHSR-QVQQTFRFYSQQWRTWAACFI 651
Query: 132 QVAWRYRQKR 141
Q AWR +R
Sbjct: 652 QAAWRRHLRR 661
>AT5G57940.2 | Symbols: ATCNGC5, CNGC5 | cyclic nucleotide gated
channel 5 | chr5:23457116-23460439 FORWARD LENGTH=717
Length = 717
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 69/130 (53%), Gaps = 16/130 (12%)
Query: 12 ICRETLDAISSDLLRKKIILPEYGTRMPLSEGDACGEELMTWYLEHSSVSSDGRKVRLPG 71
I R L+++++D R + R L EG+ CGEEL+TW L+ S V LP
Sbjct: 538 IIRGRLESVTTDGGRSG-----FFNRSLLKEGEFCGEELLTWALDPKS------GVNLPS 586
Query: 72 QRLVSNRTVNCLTNVEAFSLSAADLEEVTILFTRFLRRPQVQGALRYESPYWRSLAANRI 131
S RTV LT VEAF+L++ +L+ V F R R QVQ R+ S WR+ AA I
Sbjct: 587 ----STRTVKALTEVEAFALTSEELKFVASQFRRLHSR-QVQHTFRFYSHQWRTWAACFI 641
Query: 132 QVAWRYRQKR 141
Q AWR KR
Sbjct: 642 QAAWRRYCKR 651
>AT5G57940.1 | Symbols: ATCNGC5, CNGC5 | cyclic nucleotide gated
channel 5 | chr5:23457116-23460439 FORWARD LENGTH=717
Length = 717
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 69/130 (53%), Gaps = 16/130 (12%)
Query: 12 ICRETLDAISSDLLRKKIILPEYGTRMPLSEGDACGEELMTWYLEHSSVSSDGRKVRLPG 71
I R L+++++D R + R L EG+ CGEEL+TW L+ S V LP
Sbjct: 538 IIRGRLESVTTDGGRSG-----FFNRSLLKEGEFCGEELLTWALDPKS------GVNLPS 586
Query: 72 QRLVSNRTVNCLTNVEAFSLSAADLEEVTILFTRFLRRPQVQGALRYESPYWRSLAANRI 131
S RTV LT VEAF+L++ +L+ V F R R QVQ R+ S WR+ AA I
Sbjct: 587 ----STRTVKALTEVEAFALTSEELKFVASQFRRLHSR-QVQHTFRFYSHQWRTWAACFI 641
Query: 132 QVAWRYRQKR 141
Q AWR KR
Sbjct: 642 QAAWRRYCKR 651
>AT5G57940.3 | Symbols: ATCNGC5, CNGC5 | cyclic nucleotide gated
channel 5 | chr5:23457116-23460439 FORWARD LENGTH=710
Length = 710
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 69/130 (53%), Gaps = 16/130 (12%)
Query: 12 ICRETLDAISSDLLRKKIILPEYGTRMPLSEGDACGEELMTWYLEHSSVSSDGRKVRLPG 71
I R L+++++D R + R L EG+ CGEEL+TW L+ S V LP
Sbjct: 531 IIRGRLESVTTDGGRSG-----FFNRSLLKEGEFCGEELLTWALDPKS------GVNLPS 579
Query: 72 QRLVSNRTVNCLTNVEAFSLSAADLEEVTILFTRFLRRPQVQGALRYESPYWRSLAANRI 131
S RTV LT VEAF+L++ +L+ V F R R QVQ R+ S WR+ AA I
Sbjct: 580 ----STRTVKALTEVEAFALTSEELKFVASQFRRLHSR-QVQHTFRFYSHQWRTWAACFI 634
Query: 132 QVAWRYRQKR 141
Q AWR KR
Sbjct: 635 QAAWRRYCKR 644
>AT1G15990.1 | Symbols: ATCNGC7, CNGC7 | cyclic nucleotide gated
channel 7 | chr1:5491304-5493772 REVERSE LENGTH=709
Length = 709
Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 69/130 (53%), Gaps = 16/130 (12%)
Query: 12 ICRETLDAISSDLLRKKIILPEYGTRMPLSEGDACGEELMTWYLEHSSVSSDGRKVRLPG 71
I R L+++++D R + R L EGD CGEEL+TW L+ + S+ LP
Sbjct: 513 IIRGRLESVTTDGGRSG-----FFNRGLLKEGDFCGEELLTWALDPKAGSN------LPS 561
Query: 72 QRLVSNRTVNCLTNVEAFSLSAADLEEVTILFTRFLRRPQVQGALRYESPYWRSLAANRI 131
S RTV LT VEAF+L A +L+ V F R R QVQ R+ S WR+ A+ I
Sbjct: 562 ----STRTVKALTEVEAFALEAEELKFVASQFRRLHSR-QVQQTFRFYSQQWRTWASCFI 616
Query: 132 QVAWRYRQKR 141
Q AWR +R
Sbjct: 617 QAAWRRYSRR 626
>AT4G30560.1 | Symbols: ATCNGC9, CNGC9 | cyclic nucleotide gated
channel 9 | chr4:14926974-14929681 REVERSE LENGTH=733
Length = 733
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 72/136 (52%), Gaps = 18/136 (13%)
Query: 12 ICRETLDAISSDLLRKKIILPEYGTRMPLSEGDACGEELMTWYLEHSSVSSDGRKVRLPG 71
I R L+++++D R R L EGD CGEEL+TW L+ S S+ LP
Sbjct: 553 IIRGRLESVTTDGGRSGFF-----NRSLLKEGDFCGEELLTWALDPKSGSN------LPS 601
Query: 72 QRLVSNRTVNCLTNVEAFSLSAADLEEVTILFTRFLRRPQVQGALRYESPYWRSLAANRI 131
S RT LT VEAF+L A +L+ V F R R QVQ R+ S WR+ AA I
Sbjct: 602 ----STRTAKALTEVEAFALIADELKFVASQFRRLHSR-QVQHTFRFYSQQWRTWAAIFI 656
Query: 132 QVAWR--YRQKRLSRV 145
Q AWR ++K+L ++
Sbjct: 657 QAAWRRYVKKKKLEQL 672
>AT4G30560.2 | Symbols: CNGC9 | cyclic nucleotide gated channel 9 |
chr4:14926974-14929455 REVERSE LENGTH=707
Length = 707
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 72/136 (52%), Gaps = 18/136 (13%)
Query: 12 ICRETLDAISSDLLRKKIILPEYGTRMPLSEGDACGEELMTWYLEHSSVSSDGRKVRLPG 71
I R L+++++D R R L EGD CGEEL+TW L+ S S+ LP
Sbjct: 527 IIRGRLESVTTDGGRSGFF-----NRSLLKEGDFCGEELLTWALDPKSGSN------LPS 575
Query: 72 QRLVSNRTVNCLTNVEAFSLSAADLEEVTILFTRFLRRPQVQGALRYESPYWRSLAANRI 131
S RT LT VEAF+L A +L+ V F R R QVQ R+ S WR+ AA I
Sbjct: 576 ----STRTAKALTEVEAFALIADELKFVASQFRRLHSR-QVQHTFRFYSQQWRTWAAIFI 630
Query: 132 QVAWR--YRQKRLSRV 145
Q AWR ++K+L ++
Sbjct: 631 QAAWRRYVKKKKLEQL 646
>AT2G23980.1 | Symbols: ATCNGC6, CNGC6 | cyclic nucleotide-gated
channel 6 | chr2:10201276-10204011 REVERSE LENGTH=747
Length = 747
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 69/130 (53%), Gaps = 16/130 (12%)
Query: 12 ICRETLDAISSDLLRKKIILPEYGTRMPLSEGDACGEELMTWYLEHSSVSSDGRKVRLPG 71
I R L+++++D R + R L EGD CG+EL+TW L+ S S+ LP
Sbjct: 554 IIRGRLESVTTDGGRSG-----FYNRSLLKEGDFCGDELLTWALDPKSGSN------LPS 602
Query: 72 QRLVSNRTVNCLTNVEAFSLSAADLEEVTILFTRFLRRPQVQGALRYESPYWRSLAANRI 131
S RTV LT VEAF+L A +L+ V F R R QVQ R+ S WR+ AA +
Sbjct: 603 ----STRTVKALTEVEAFALIADELKFVASQFRRLHSR-QVQHTFRFYSQQWRTWAACFM 657
Query: 132 QVAWRYRQKR 141
Q AWR KR
Sbjct: 658 QAAWRRYIKR 667
>AT2G24610.1 | Symbols: ATCNGC14, CNGC14 | cyclic nucleotide-gated
channel 14 | chr2:10457105-10460351 FORWARD LENGTH=726
Length = 726
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 61/112 (54%), Gaps = 12/112 (10%)
Query: 34 YGTRMPLSEGDACGEELMTWYLEHSSVSSDGRKVRLPGQRLVSNRTVNCLTNVEAFSLSA 93
+ + L GD CGEEL+ W L S V LP S RTV L VEAF+L A
Sbjct: 538 FFNSITLRPGDFCGEELLAWALLPKST------VNLPS----STRTVRALEEVEAFALQA 587
Query: 94 ADLEEVTILFTRFLRRPQVQGALRYESPYWRSLAANRIQVAWR-YRQKRLSR 144
DL+ V F R L ++Q RY S WR+ AA +QVAWR Y++K+L++
Sbjct: 588 GDLKFVANQFRR-LHSKKLQHTFRYYSHQWRTWAACFVQVAWRRYKRKKLAK 638
>AT5G53130.1 | Symbols: CNGC1, ATCNGC1 | cyclic nucleotide gated
channel 1 | chr5:21537830-21540490 REVERSE LENGTH=716
Length = 716
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 65/125 (52%), Gaps = 16/125 (12%)
Query: 12 ICRETLDAISSDLLRKKIILPEYGTRMPLSEGDACGEELMTWYLEHSSVSSDGRKVRLPG 71
I R L I+++ R + EY L GD CGEEL+TW L+ S S+ LP
Sbjct: 526 IMRGKLLTITTNGGRTGFLNSEY-----LGAGDFCGEELLTWALDPHSSSN------LP- 573
Query: 72 QRLVSNRTVNCLTNVEAFSLSAADLEEVTILFTRFLRRPQVQGALRYESPYWRSLAANRI 131
+S RTV L VEAF+L A DL+ V F R L Q++ RY S W++ AA I
Sbjct: 574 ---ISTRTVRALMEVEAFALKADDLKFVASQFRR-LHSKQLRHTFRYYSQQWKTWAACFI 629
Query: 132 QVAWR 136
Q AWR
Sbjct: 630 QAAWR 634
>AT5G14870.1 | Symbols: CNGC18, ATCNGC18 | cyclic nucleotide-gated
channel 18 | chr5:4808268-4810897 REVERSE LENGTH=706
Length = 706
Score = 69.3 bits (168), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 63/106 (59%), Gaps = 12/106 (11%)
Query: 40 LSEGDACGEELMTWYLEHSSVSSDGRKVRLPGQRLVSNRTVNCLTNVEAFSLSAADLEEV 99
L GD CGEEL+TW L +S + LP S R+V L+ VEAF+LSA DL+ V
Sbjct: 512 LRPGDFCGEELLTWALMPNST------LNLPS----STRSVRALSEVEAFALSAEDLKFV 561
Query: 100 TILFTRFLRRPQVQGALRYESPYWRSLAANRIQVAW-RYRQKRLSR 144
F R L+ ++Q A RY S WR+ A +Q AW RY++++L++
Sbjct: 562 AHQFKR-LQSKKLQHAFRYYSHQWRAWGACFVQSAWRRYKRRKLAK 606
>AT2G28260.1 | Symbols: ATCNGC15, CNGC15 | cyclic nucleotide-gated
channel 15 | chr2:12049989-12052453 FORWARD LENGTH=678
Length = 678
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 40 LSEGDACGEELMTWYLEHSSVSSDGRKVRLPGQRLVSNRTVNCLTNVEAFSLSAADLEEV 99
+ GD CGEEL+TW L+ V V LP S RTV + VEAF+L A DL+ V
Sbjct: 534 IGPGDFCGEELLTWALDPRPV------VILPS----STRTVKAICEVEAFALKAEDLQFV 583
Query: 100 TILFTRFLRRPQVQGALRYESPYWRSLAANRIQVAWRYRQKR 141
F R L Q++ R+ S WR+ AA IQ AWR +KR
Sbjct: 584 ASQFRR-LHTKQLRHKFRFYSHQWRTWAACFIQAAWRRHRKR 624
>AT4G01010.1 | Symbols: ATCNGC13, CNGC13 | cyclic nucleotide-gated
channel 13 | chr4:434569-437242 REVERSE LENGTH=696
Length = 696
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 40 LSEGDACGEELMTWYLEHSSVSSDGRKVRLPGQRLVSNRTVNCLTNVEAFSLSAADLEEV 99
L D CGE+L+TW L+ S S P +S RTV LT VEAF+L+A DL+ V
Sbjct: 537 LKPSDFCGEDLLTWALDPQSSS------HFP----ISTRTVQALTEVEAFALAADDLKLV 586
Query: 100 TILFTRFLRRPQVQGALRYESPYWRSLAANRIQVAWRYRQKR 141
F R L Q+Q R+ S WR+ A+ IQ AWR +R
Sbjct: 587 ASQFRR-LHSKQLQHTFRFYSVQWRTWGASFIQAAWRRHCRR 627
>AT4G30360.1 | Symbols: ATCNGC17, CNGC17 | cyclic nucleotide-gated
channel 17 | chr4:14855060-14857779 REVERSE LENGTH=720
Length = 720
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 40 LSEGDACGEELMTWYLEHSSVSSDGRKVRLPGQRLVSNRTVNCLTNVEAFSLSAADLEEV 99
L GD CGEEL++W L S + LP S RTV L VEAF+L A DL+ V
Sbjct: 544 LRPGDFCGEELLSWALLPKST------LNLPS----STRTVRALVEVEAFALRAEDLKFV 593
Query: 100 TILFTRFLRRPQVQGALRYESPYWRSLAANRIQVAWRYRQKRLSRVN 146
F R L ++Q R+ S +WR+ AA IQ AWR ++R+ N
Sbjct: 594 ANQFRR-LHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKRRVMENN 639
>AT1G01340.1 | Symbols: ATCNGC10, CNGC10, ACBK1 | cyclic nucleotide
gated channel 10 | chr1:132414-135118 REVERSE LENGTH=706
Length = 706
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 12/106 (11%)
Query: 40 LSEGDACGEELMTWYLEHSSVSSDGRKVRLPGQRLVSNRTVNCLTNVEAFSLSAADLEEV 99
L D CGE+L+ W L+ S S P +S RTV LT VEAF+L+A DL+ V
Sbjct: 531 LKASDFCGEDLLPWALDPQSSS------HFP----ISTRTVQALTEVEAFALTAEDLKSV 580
Query: 100 TILFTRFLRRPQVQGALRYESPYWRSLAANRIQVAW-RYRQKRLSR 144
F R L Q+Q R+ S WR+ + + IQ AW RY +++L++
Sbjct: 581 ASQFRR-LHSKQLQHTFRFYSVQWRTWSVSFIQAAWRRYCRRKLAK 625
>AT1G01340.2 | Symbols: CNGC10 | cyclic nucleotide gated channel 10
| chr1:132414-135216 REVERSE LENGTH=711
Length = 711
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 12/106 (11%)
Query: 40 LSEGDACGEELMTWYLEHSSVSSDGRKVRLPGQRLVSNRTVNCLTNVEAFSLSAADLEEV 99
L D CGE+L+ W L+ S S P +S RTV LT VEAF+L+A DL+ V
Sbjct: 536 LKASDFCGEDLLPWALDPQSSS------HFP----ISTRTVQALTEVEAFALTAEDLKSV 585
Query: 100 TILFTRFLRRPQVQGALRYESPYWRSLAANRIQVAW-RYRQKRLSR 144
F R L Q+Q R+ S WR+ + + IQ AW RY +++L++
Sbjct: 586 ASQFRR-LHSKQLQHTFRFYSVQWRTWSVSFIQAAWRRYCRRKLAK 630
>AT3G48010.1 | Symbols: ATCNGC16, CNGC16 | cyclic nucleotide-gated
channel 16 | chr3:17721335-17724028 REVERSE LENGTH=705
Length = 705
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 58/108 (53%), Gaps = 11/108 (10%)
Query: 34 YGTRMPLSEGDACGEELMTWYLEHSSVSSDGRKVRLPGQRLVSNRTVNCLTNVEAFSLSA 93
+ + L GD CGEEL+TW L +++ + LP +S RTV L+ VEAF+L A
Sbjct: 514 FFNSITLRPGDFCGEELLTWALV-PNINHN-----LP----LSTRTVRTLSEVEAFALRA 563
Query: 94 ADLEEVTILFTRFLRRPQVQGALRYESPYWRSLAANRIQVAWRYRQKR 141
DL+ V F R L ++Q A RY S WR+ IQ AWR KR
Sbjct: 564 EDLKFVANQFRR-LHSKKLQHAFRYYSHQWRAWGTCFIQAAWRRYMKR 610
>AT2G46440.1 | Symbols: ATCNGC11, CNGC11 | cyclic nucleotide-gated
channels | chr2:19062082-19064628 FORWARD LENGTH=621
Length = 621
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 62/118 (52%), Gaps = 20/118 (16%)
Query: 34 YGTR------MPLSEGDACGEELMTWYLEHSSVSSDGRKVRLPGQRLVSNRTVNCLTNVE 87
YG R + L GD+CG+ L+TW L L Q +S+RTV LT VE
Sbjct: 486 YGGRTGFFNSVDLIAGDSCGD-LLTWAL-----------YSLSSQFPISSRTVQALTEVE 533
Query: 88 AFSLSAADLEEVTILFTRFLRRPQVQGALRYESPYWRSLAANRIQVAW-RYRQKRLSR 144
F +SA DL+ V + R L Q+Q R+ S W++ AA IQ AW R+ +++LS+
Sbjct: 534 GFVISADDLKFVATQYRR-LHSKQLQHMFRFYSLQWQTWAACFIQAAWKRHCRRKLSK 590
>AT5G54250.3 | Symbols: CNGC4 | cyclic nucleotide-gated cation
channel 4 | chr5:22025684-22029971 REVERSE LENGTH=689
Length = 689
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 40 LSEGDACGEELMTWYLEHSSVSSDGRKVRLPGQRLVSNRTVNCLTNVEAFSLSAADLEEV 99
L G+ G+EL++W L V RLP S+ T+ L EAF L A D++ V
Sbjct: 552 LGPGNFSGDELLSWCLRRPFVE------RLPP----SSSTLVTLETTEAFGLDAEDVKYV 601
Query: 100 TILFTRFLRRPQVQGALRYESPYWRSLAANRIQVAWRYRQKRLS 143
T F +V+ + RY SP WR+ AA +Q+AWR + RL+
Sbjct: 602 TQHFRYTFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHRLT 645
>AT5G54250.2 | Symbols: ATCNGC4, CNGC4, HLM1, DND2 | cyclic
nucleotide-gated cation channel 4 |
chr5:22025684-22029971 REVERSE LENGTH=694
Length = 694
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 40 LSEGDACGEELMTWYLEHSSVSSDGRKVRLPGQRLVSNRTVNCLTNVEAFSLSAADLEEV 99
L G+ G+EL++W L V RLP S+ T+ L EAF L A D++ V
Sbjct: 557 LGPGNFSGDELLSWCLRRPFVE------RLPP----SSSTLVTLETTEAFGLDAEDVKYV 606
Query: 100 TILFTRFLRRPQVQGALRYESPYWRSLAANRIQVAWRYRQKRLS 143
T F +V+ + RY SP WR+ AA +Q+AWR + RL+
Sbjct: 607 TQHFRYTFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHRLT 650
>AT5G54250.1 | Symbols: ATCNGC4, CNGC4, HLM1, DND2 | cyclic
nucleotide-gated cation channel 4 |
chr5:22025684-22029971 REVERSE LENGTH=694
Length = 694
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 40 LSEGDACGEELMTWYLEHSSVSSDGRKVRLPGQRLVSNRTVNCLTNVEAFSLSAADLEEV 99
L G+ G+EL++W L V RLP S+ T+ L EAF L A D++ V
Sbjct: 557 LGPGNFSGDELLSWCLRRPFVE------RLPP----SSSTLVTLETTEAFGLDAEDVKYV 606
Query: 100 TILFTRFLRRPQVQGALRYESPYWRSLAANRIQVAWRYRQKRLS 143
T F +V+ + RY SP WR+ AA +Q+AWR + RL+
Sbjct: 607 TQHFRYTFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHRLT 650
>AT2G46430.2 | Symbols: ATCNGC3, CNGC3, CNGC3.C | cyclic nucleotide
gated channel 3 | chr2:19058472-19061273 FORWARD
LENGTH=706
Length = 706
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 14/106 (13%)
Query: 40 LSEGDACGEELMTWYLEHSSVSSDGRKVRLPGQRLVSNRTVNCLTNVEAFSLSAADLEEV 99
L GD CG+ L+TW L+ L Q +S+RTV LT VE F LSA DL+ V
Sbjct: 540 LVAGDFCGD-LLTWALDP-----------LSSQFPISSRTVQALTEVEGFLLSADDLKFV 587
Query: 100 TILFTRFLRRPQVQGALRYESPYWRSLAANRIQVAW-RYRQKRLSR 144
+ R L Q++ R+ S W++ AA IQ AW R+ +++LS+
Sbjct: 588 ATQYRR-LHSKQLRHMFRFYSVQWQTWAACFIQAAWKRHCRRKLSK 632
>AT2G46430.1 | Symbols: ATCNGC3, CNGC3, CNGC3.C | cyclic nucleotide
gated channel 3 | chr2:19058472-19061273 FORWARD
LENGTH=706
Length = 706
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 14/106 (13%)
Query: 40 LSEGDACGEELMTWYLEHSSVSSDGRKVRLPGQRLVSNRTVNCLTNVEAFSLSAADLEEV 99
L GD CG+ L+TW L+ L Q +S+RTV LT VE F LSA DL+ V
Sbjct: 540 LVAGDFCGD-LLTWALDP-----------LSSQFPISSRTVQALTEVEGFLLSADDLKFV 587
Query: 100 TILFTRFLRRPQVQGALRYESPYWRSLAANRIQVAW-RYRQKRLSR 144
+ R L Q++ R+ S W++ AA IQ AW R+ +++LS+
Sbjct: 588 ATQYRR-LHSKQLRHMFRFYSVQWQTWAACFIQAAWKRHCRRKLSK 632
>AT5G15410.1 | Symbols: DND1, ATCNGC2, CNGC2 | Cyclic
nucleotide-regulated ion channel family protein |
chr5:5003460-5006763 REVERSE LENGTH=726
Length = 726
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 40 LSEGDACGEELMTWYLEHSSVSSDGRKVRLPGQRLVSNRTVNCLTNVEAFSLSAADLEEV 99
L G G+EL++W L + RLP S+ T CL N+EAFSL + DL +
Sbjct: 592 LEPGGYLGDELLSWCLRRPFLD------RLPP----SSATFVCLENIEAFSLGSEDLRYI 641
Query: 100 TILFTRFLRRPQVQGALRYESPYWRSLAANRIQVAW 135
T F +++ RY S WR+ AA IQ+AW
Sbjct: 642 TDHFRYKFANERLKRTARYYSSNWRTWAAVNIQMAW 677
>AT5G15410.2 | Symbols: DND1, ATCNGC2, CNGC2 | Cyclic
nucleotide-regulated ion channel family protein |
chr5:5003460-5006512 REVERSE LENGTH=725
Length = 725
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 40 LSEGDACGEELMTWYLEHSSVSSDGRKVRLPGQRLVSNRTVNCLTNVEAFSLSAADLEEV 99
L G G+EL++W L + RLP S+ T CL N+EAFSL + DL +
Sbjct: 591 LEPGGYLGDELLSWCLRRPFLD------RLPP----SSATFVCLENIEAFSLGSEDLRYI 640
Query: 100 TILFTRFLRRPQVQGALRYESPYWRSLAANRIQVAW 135
T F +++ RY S WR+ AA IQ+AW
Sbjct: 641 TDHFRYKFANERLKRTARYYSSNWRTWAAVNIQMAW 676
>AT2G46450.1 | Symbols: ATCNGC12, CNGC12 | cyclic nucleotide-gated
channel 12 | chr2:19065845-19068364 FORWARD LENGTH=649
Length = 649
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 45/103 (43%), Gaps = 20/103 (19%)
Query: 40 LSEGDACGEELMTWYLEHSSVSSDGRKVRLPGQRL-VSNRTVNCLTNVEAFSLSAADLEE 98
L +GD CGE L G RL S RTV LT VE F L D++
Sbjct: 499 LQDGDICGELLFN------------------GSRLPTSTRTVMTLTEVEGFILLPDDIKF 540
Query: 99 VTILFTRFLRRPQVQGALRYESPYWRSLAANRIQVAWRYRQKR 141
+ F +R ++Q R S WRS AA IQ AWR KR
Sbjct: 541 IASHLNVF-QRQKLQRTFRLYSQQWRSWAAFFIQAAWRKHCKR 582
>AT2G46450.2 | Symbols: CNGC12 | cyclic nucleotide-gated channel 12
| chr2:19065845-19068364 FORWARD LENGTH=626
Length = 626
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 45/102 (44%), Gaps = 18/102 (17%)
Query: 40 LSEGDACGEELMTWYLEHSSVSSDGRKVRLPGQRLVSNRTVNCLTNVEAFSLSAADLEEV 99
L +GD CGE L RLP S RTV LT VE F L D++ +
Sbjct: 476 LQDGDICGELLFN-------------GSRLP----TSTRTVMTLTEVEGFILLPDDIKFI 518
Query: 100 TILFTRFLRRPQVQGALRYESPYWRSLAANRIQVAWRYRQKR 141
F +R ++Q R S WRS AA IQ AWR KR
Sbjct: 519 ASHLNVF-QRQKLQRTFRLYSQQWRSWAAFFIQAAWRKHCKR 559
>AT2G46450.3 | Symbols: CNGC12 | cyclic nucleotide-gated channel 12
| chr2:19065953-19068364 FORWARD LENGTH=613
Length = 613
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 45/103 (43%), Gaps = 20/103 (19%)
Query: 40 LSEGDACGEELMTWYLEHSSVSSDGRKVRLPGQRL-VSNRTVNCLTNVEAFSLSAADLEE 98
L +GD CGE L G RL S RTV LT VE F L D++
Sbjct: 463 LQDGDICGELLFN------------------GSRLPTSTRTVMTLTEVEGFILLPDDIKF 504
Query: 99 VTILFTRFLRRPQVQGALRYESPYWRSLAANRIQVAWRYRQKR 141
+ F +R ++Q R S WRS AA IQ AWR KR
Sbjct: 505 IASHLNVF-QRQKLQRTFRLYSQQWRSWAAFFIQAAWRKHCKR 546