Miyakogusa Predicted Gene
- Lj6g3v0920000.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0920000.1 Non Chatacterized Hit- tr|K4BQJ4|K4BQJ4_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,38.82,1e-18,FAMILY NOT NAMED,NULL; PMD,Aminotransferase-like,
plant mobile domain,CUFF.58477.1
(277 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G32120.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 116 2e-26
AT4G16050.1 | Symbols: | Aminotransferase-like, plant mobile do... 95 6e-20
AT1G50830.1 | Symbols: | Aminotransferase-like, plant mobile do... 95 7e-20
AT1G50820.1 | Symbols: | Aminotransferase-like, plant mobile do... 91 1e-18
AT1G51538.1 | Symbols: | Aminotransferase-like, plant mobile do... 90 1e-18
AT1G50750.1 | Symbols: | Plant mobile domain protein family | c... 84 7e-17
AT5G18510.1 | Symbols: | Aminotransferase-like, plant mobile do... 80 2e-15
AT1G50790.1 | Symbols: | Plant mobile domain protein family | c... 75 4e-14
>AT1G32120.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 4 anthesis, C globular stage, F mature embryo
stage, petal differentiation and expansion stage, E
expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
Aminotransferase-like, plant mobile domain
(InterPro:IPR019557), Protein of unknown function DUF716
(InterPro:IPR006904); BEST Arabidopsis thaliana protein
match is: Aminotransferase-like, plant mobile domain
family protein (TAIR:AT1G51538.1); Has 16736 Blast hits
to 9656 proteins in 576 species: Archae - 4; Bacteria -
1182; Metazoa - 7098; Fungi - 2631; Plants - 1178;
Viruses - 174; Other Eukaryotes - 4469 (source: NCBI
BLink). | chr1:11552926-11558608 FORWARD LENGTH=1206
Length = 1206
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 86/139 (61%), Gaps = 10/139 (7%)
Query: 4 DNARLALNSAMGDFLWRPYVRYGGKCR--AFYPENE--IQQVPFEADLDKELASFVRCMR 59
+N R L+SA F +RPY + R FY E++ ++ P D+ + +F RC+R
Sbjct: 332 ENIRAVLDSAKESFDYRPYTKPVNNFRFPKFYFEDDCWVRVRP-----DENIVAFGRCLR 386
Query: 60 VSELVGIDSTILQYCPHRVAMQFGMDQDVLDCVPVFRRTEGIAWENYCRPISDRNLYFPS 119
++LVG+D I Y PHRVA+QFG DQDV VP T +AW++Y RPI+D LYFP+
Sbjct: 387 FAKLVGLD-CIEPYYPHRVALQFGYDQDVPGVVPARIETPELAWKDYIRPIADGMLYFPA 445
Query: 120 RLFEADVTTRYARWWKQSV 138
RL EADVT Y RWWK SV
Sbjct: 446 RLHEADVTVGYIRWWKLSV 464
>AT4G16050.1 | Symbols: | Aminotransferase-like, plant mobile
domain family protein | chr4:9092243-9094243 FORWARD
LENGTH=666
Length = 666
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 75/134 (55%), Gaps = 12/134 (8%)
Query: 15 GDFLWRPYVR--YGGKCRAFYPENEIQQVPFEADLDK------ELASFVRCMRVSELVGI 66
G+F WRPY FY E E + V + LD E SF RC+RVS+LVGI
Sbjct: 315 GNFDWRPYSEPLENWNPPRFYVE-EAKWVRIDESLDGDYDDDDEFVSFARCVRVSKLVGI 373
Query: 67 DSTILQYCPHRVAMQFGMDQDVLDCVPVFRR--TEGIAWENYCRPISDRNLYFPSRLFEA 124
+ Y P+RVAMQFG+ QDV RR TE AW++Y +P+ LYFPSR+ A
Sbjct: 374 -GVVENYYPNRVAMQFGLAQDVPVLGTNHRRNFTEEEAWDDYNKPLVGLKLYFPSRVATA 432
Query: 125 DVTTRYARWWKQSV 138
VTTRY WW +SV
Sbjct: 433 SVTTRYRDWWAKSV 446
>AT1G50830.1 | Symbols: | Aminotransferase-like, plant mobile
domain family protein | chr1:18835559-18837865 REVERSE
LENGTH=768
Length = 768
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 70/126 (55%), Gaps = 5/126 (3%)
Query: 16 DFLWRPYVRYGGKCR--AFYPENEIQQVPFEADLDKELASFVRCMRVSELVGIDSTILQY 73
DF WRPY + FY E I V + +D E ASF RC+ VS++VG D + Y
Sbjct: 331 DFEWRPYTKALNNWNPFRFYLEEAIW-VTVDESIDDEFASFARCVTVSQIVG-DGFVEDY 388
Query: 74 CPHRVAMQFGMDQDVLDCVPVFRR-TEGIAWENYCRPISDRNLYFPSRLFEADVTTRYAR 132
P+RVA QFG+DQD+ R TE AW +Y + + NLY PSRL + VT RY
Sbjct: 389 FPNRVARQFGLDQDLPGLATCQRNSTEKEAWNDYNKSLIGLNLYMPSRLDQGSVTARYRV 448
Query: 133 WWKQSV 138
WW +SV
Sbjct: 449 WWLKSV 454
>AT1G50820.1 | Symbols: | Aminotransferase-like, plant mobile
domain family protein | chr1:18833275-18834861 REVERSE
LENGTH=528
Length = 528
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 67/116 (57%), Gaps = 4/116 (3%)
Query: 7 RLALNSAMGDFLWRPYVRYGGKCR--AFYPENEIQQVPFEADLDKELASFVRCMRVSELV 64
R+ NS M F WRPY + FYPE ++ VP +LD E SF RC++VSELV
Sbjct: 306 RIFNNSKMDSFEWRPYTKTVKNWDFPRFYPERAMR-VPVGPNLDDEFISFARCIKVSELV 364
Query: 65 GIDSTILQYCPHRVAMQFGMDQDVLDCVPVFRRTEGIAWENYCRPISDRNLYFPSR 120
GIDS + Y P+RVA QFGM QDV V + + AW +Y +PI +Y PSR
Sbjct: 365 GIDS-VEHYFPNRVASQFGMRQDVHCPVNQKKLSRDAAWNDYDKPIDGLTIYIPSR 419
>AT1G51538.1 | Symbols: | Aminotransferase-like, plant mobile
domain family protein | chr1:19113183-19115273 FORWARD
LENGTH=696
Length = 696
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Query: 5 NARLALNSAMGDFLWRPYVRYGGKCR--AFYPENEIQQVPFEADLDKELASFVRCMRVSE 62
N RL L DF WRPY + FYPE E + + +LD SF RCMRVS+
Sbjct: 299 NVRLNL----VDFDWRPYTKPLQIWNPPRFYPE-EAMWMTVDDNLDDGFVSFARCMRVSQ 353
Query: 63 LVGIDSTILQYCPHRVAMQFGMDQDVLDCVPVFRR-TEGIAWENYCRPISDRNLYFPSRL 121
LVG+ + Y P+RVAMQFG+ QD+ V TE AW+ Y + + LY PSR+
Sbjct: 354 LVGV-GIVEDYYPNRVAMQFGLAQDLPGLVTDHSSFTEKEAWDGYNKSLDGLMLYIPSRV 412
Query: 122 FEADVTTRYARWWKQSV 138
VT RY WW +S+
Sbjct: 413 ATTSVTERYRDWWLKSI 429
>AT1G50750.1 | Symbols: | Plant mobile domain protein family |
chr1:18809184-18812050 REVERSE LENGTH=816
Length = 816
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 68/127 (53%), Gaps = 3/127 (2%)
Query: 18 LWRPYVRYGGKCRAFYPENEIQQV--PFEADLDKELASFVRCMRVSELVGIDSTILQYCP 75
LW ++ R +I V P +LD E SF RC++VS+LVGID+ + Y P
Sbjct: 246 LWHGLLQRTSDARQILDSLKIDTVWIPASPNLDVEFVSFARCIKVSQLVGIDN-VEHYFP 304
Query: 76 HRVAMQFGMDQDVLDCVPVFRRTEGIAWENYCRPISDRNLYFPSRLFEADVTTRYARWWK 135
+RVA QFGM QDV V ++ AW +Y +PI+D L+ PSR VT + WW+
Sbjct: 305 NRVASQFGMLQDVPCAVNQNNLSQEAAWNDYNKPINDLALFIPSRSAIPRVTPTFCEWWR 364
Query: 136 QSVMHHQ 142
+S Q
Sbjct: 365 RSFPEFQ 371
>AT5G18510.1 | Symbols: | Aminotransferase-like, plant mobile
domain family protein | chr5:6141778-6143886 REVERSE
LENGTH=702
Length = 702
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 67/128 (52%), Gaps = 5/128 (3%)
Query: 17 FLWRPYVR--YGGKCRAFYPENEIQQVPFEADLDKELASFVRCMRVSELVGIDSTILQYC 74
F WRPY + FY +E + + +D ASF RC++VS L G + + Y
Sbjct: 308 FEWRPYTKPLKNWNPLRFYV-DEAMWLTVDDSVDDAFASFARCVKVSYLAG-NGFVEDYF 365
Query: 75 PHRVAMQFGMDQDVLDCVPVFRR-TEGIAWENYCRPISDRNLYFPSRLFEADVTTRYARW 133
P+RVA QFG+ QD+ V R+ TE AW++Y + NLY PS+L VT RY W
Sbjct: 366 PYRVARQFGLSQDLPGLVTRRRKITEKDAWDDYSNSLEGLNLYLPSQLDRGYVTARYQDW 425
Query: 134 WKQSVMHH 141
W +S +
Sbjct: 426 WFKSASEY 433
>AT1G50790.1 | Symbols: | Plant mobile domain protein family |
chr1:18824050-18826488 REVERSE LENGTH=812
Length = 812
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
Query: 7 RLALNSAMGDFLWRPYVRYGGKCR--AFYPENEIQQVPFEADLDKELASFVRCMRVSELV 64
R+ NS + F W PY + FYPE + V + D E SF RC+ VS+LV
Sbjct: 310 RILNNSKIDGFEWCPYTKTVKNWDFPQFYPE-KATWVTLVPNRDDEFISFARCIMVSQLV 368
Query: 65 GIDSTILQYCPHRVAMQFGMDQDVLDCVPVFRR--TEGIAWENYCRPISDRNLYFPSR 120
GIDS + Y P+RVA QFG QDV C PV R + AW +Y +P+ D LY PSR
Sbjct: 369 GIDS-LEHYYPNRVASQFGRLQDV-HC-PVNRNNLSREAAWNDYYKPLDDLELYIPSR 423