Miyakogusa Predicted Gene
- Lj6g3v0918820.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0918820.1 tr|Q8RXC3|Q8RXC3_ARATH Aminotransferase-like,
plant mobile domain family protein OS=Arabidopsis
thal,42.54,2e-19,PMD,Aminotransferase-like, plant mobile domain;
seg,NULL; FAMILY NOT NAMED,NULL,CUFF.58455.1
(134 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G51538.1 | Symbols: | Aminotransferase-like, plant mobile do... 103 3e-23
AT1G32120.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 103 4e-23
AT1G50830.1 | Symbols: | Aminotransferase-like, plant mobile do... 100 2e-22
AT5G18510.1 | Symbols: | Aminotransferase-like, plant mobile do... 99 6e-22
AT1G50820.1 | Symbols: | Aminotransferase-like, plant mobile do... 99 1e-21
AT4G16050.1 | Symbols: | Aminotransferase-like, plant mobile do... 95 1e-20
AT1G50790.1 | Symbols: | Plant mobile domain protein family | c... 89 7e-19
AT1G50750.1 | Symbols: | Plant mobile domain protein family | c... 64 3e-11
>AT1G51538.1 | Symbols: | Aminotransferase-like, plant mobile
domain family protein | chr1:19113183-19115273 FORWARD
LENGTH=696
Length = 696
Score = 103 bits (258), Expect = 3e-23, Method: Composition-based stats.
Identities = 55/135 (40%), Positives = 80/135 (59%), Gaps = 15/135 (11%)
Query: 5 VTLWAPFQLVQVWALERFPALQPNPCPVRQGQPIMAKWDRVXXXXXXXXXXILDDAGSRN 64
VTL + F+LVQ+WA ERF + P + +G+P +++W ++D
Sbjct: 255 VTLKSLFKLVQLWAWERFKSTSPKARVIPKGEPRISRWHS--QTSKNVRLNLVD------ 306
Query: 65 GFLWRPYQN-----SPPLYLYNEKDMWMCDNPCFDDELQAFSRCLRVSELVGMGCIENYR 119
F WRPY +PP + Y E+ MWM + DD +F+RC+RVS+LVG+G +E+Y
Sbjct: 307 -FDWRPYTKPLQIWNPPRF-YPEEAMWMTVDDNLDDGFVSFARCMRVSQLVGVGIVEDYY 364
Query: 120 PNRVAMQFGMDQDIP 134
PNRVAMQFG+ QD+P
Sbjct: 365 PNRVAMQFGLAQDLP 379
>AT1G32120.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 4 anthesis, C globular stage, F mature embryo
stage, petal differentiation and expansion stage, E
expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
Aminotransferase-like, plant mobile domain
(InterPro:IPR019557), Protein of unknown function DUF716
(InterPro:IPR006904); BEST Arabidopsis thaliana protein
match is: Aminotransferase-like, plant mobile domain
family protein (TAIR:AT1G51538.1); Has 16736 Blast hits
to 9656 proteins in 576 species: Archae - 4; Bacteria -
1182; Metazoa - 7098; Fungi - 2631; Plants - 1178;
Viruses - 174; Other Eukaryotes - 4469 (source: NCBI
BLink). | chr1:11552926-11558608 FORWARD LENGTH=1206
Length = 1206
Score = 103 bits (257), Expect = 4e-23, Method: Composition-based stats.
Identities = 61/146 (41%), Positives = 80/146 (54%), Gaps = 19/146 (13%)
Query: 2 KLRVTLWAPFQLVQVWALERFPALQP--NPCPVRQGQPIMAKWDRV-----XXXXXXXXX 54
K V + +PFQ VQVWALERF ALQP P ++ G+P +A+W
Sbjct: 276 KETVVVKSPFQFVQVWALERFMALQPPGQPSQLKTGEPRIARWHHYGGGQDVYGYPENIR 335
Query: 55 XILDDAGSRNGFLWRPYQNS------PPLYLYNEKDMWMCDNPCFDDELQAFSRCLRVSE 108
+LD A + F +RPY P Y E D W+ P D+ + AF RCLR ++
Sbjct: 336 AVLDSA--KESFDYRPYTKPVNNFRFPKFYF--EDDCWVRVRP--DENIVAFGRCLRFAK 389
Query: 109 LVGMGCIENYRPNRVAMQFGMDQDIP 134
LVG+ CIE Y P+RVA+QFG DQD+P
Sbjct: 390 LVGLDCIEPYYPHRVALQFGYDQDVP 415
>AT1G50830.1 | Symbols: | Aminotransferase-like, plant mobile
domain family protein | chr1:18835559-18837865 REVERSE
LENGTH=768
Length = 768
Score = 100 bits (250), Expect = 2e-22, Method: Composition-based stats.
Identities = 51/128 (39%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 11 FQLVQVWALERFPALQPNPCPVRQGQPIMAKWDRVXXXXXXXXXXILDDAGSRNGFLWRP 70
F+LVQVW ERF ++P + +G+P +A+W + DD F WRP
Sbjct: 284 FKLVQVWTWERFRNIRPKASDIPKGEPRIAQWHGLHRRSKDAWF-CFDD------FEWRP 336
Query: 71 Y----QNSPPLYLYNEKDMWMCDNPCFDDELQAFSRCLRVSELVGMGCIENYRPNRVAMQ 126
Y N P Y E+ +W+ + DDE +F+RC+ VS++VG G +E+Y PNRVA Q
Sbjct: 337 YTKALNNWNPFRFYLEEAIWVTVDESIDDEFASFARCVTVSQIVGDGFVEDYFPNRVARQ 396
Query: 127 FGMDQDIP 134
FG+DQD+P
Sbjct: 397 FGLDQDLP 404
>AT5G18510.1 | Symbols: | Aminotransferase-like, plant mobile
domain family protein | chr5:6141778-6143886 REVERSE
LENGTH=702
Length = 702
Score = 99.4 bits (246), Expect = 6e-22, Method: Composition-based stats.
Identities = 51/135 (37%), Positives = 76/135 (56%), Gaps = 11/135 (8%)
Query: 4 RVTLWAPFQLVQVWALERFPALQPNPCPVRQGQPIMAKWDRVXXXXXXXXXXILDDAGSR 63
+V L + F+LVQVW ERF ++P + +G+P +A+WD + S
Sbjct: 253 KVNLKSLFKLVQVWTWERFSNIRPKAKEIPKGEPRIAQWDGLQQISKNVKL-------SF 305
Query: 64 NGFLWRPY----QNSPPLYLYNEKDMWMCDNPCFDDELQAFSRCLRVSELVGMGCIENYR 119
+ F WRPY +N PL Y ++ MW+ + DD +F+RC++VS L G G +E+Y
Sbjct: 306 DVFEWRPYTKPLKNWNPLRFYVDEAMWLTVDDSVDDAFASFARCVKVSYLAGNGFVEDYF 365
Query: 120 PNRVAMQFGMDQDIP 134
P RVA QFG+ QD+P
Sbjct: 366 PYRVARQFGLSQDLP 380
>AT1G50820.1 | Symbols: | Aminotransferase-like, plant mobile
domain family protein | chr1:18833275-18834861 REVERSE
LENGTH=528
Length = 528
Score = 98.6 bits (244), Expect = 1e-21, Method: Composition-based stats.
Identities = 54/137 (39%), Positives = 79/137 (57%), Gaps = 6/137 (4%)
Query: 1 MKLRVTLWAPFQLVQVWALERFPALQPNPCPVRQGQPIMAKWDRVXXXXXXXXXXILDDA 60
+K+++ L A F+LVQVWA ERF LQ P + +G+P +A+W + +
Sbjct: 253 IKVQLDLNALFKLVQVWAWERFRELQLKPFSLLRGEPRLARWCDMKQSTSNAWRIF--NN 310
Query: 61 GSRNGFLWRPYQNSPPLY----LYNEKDMWMCDNPCFDDELQAFSRCLRVSELVGMGCIE 116
+ F WRPY + + Y E+ M + P DDE +F+RC++VSELVG+ +E
Sbjct: 311 SKMDSFEWRPYTKTVKNWDFPRFYPERAMRVPVGPNLDDEFISFARCIKVSELVGIDSVE 370
Query: 117 NYRPNRVAMQFGMDQDI 133
+Y PNRVA QFGM QD+
Sbjct: 371 HYFPNRVASQFGMRQDV 387
>AT4G16050.1 | Symbols: | Aminotransferase-like, plant mobile
domain family protein | chr4:9092243-9094243 FORWARD
LENGTH=666
Length = 666
Score = 95.1 bits (235), Expect = 1e-20, Method: Composition-based stats.
Identities = 53/134 (39%), Positives = 74/134 (55%), Gaps = 15/134 (11%)
Query: 11 FQLVQVWALERFPALQPNPCPVRQGQPIMAKWDRVXXXXXXXXXXILDDAGSRNGFLWRP 70
F+LVQVW ERF +++P + +GQP +A+W + I F WRP
Sbjct: 267 FKLVQVWIWERFKSIRPEAKVIPRGQPRIAQWSGLKQRFKNVGLIIF-----HGNFDWRP 321
Query: 71 Y----QNSPPLYLYNEKDMWMCDNPCFDD------ELQAFSRCLRVSELVGMGCIENYRP 120
Y +N P Y E+ W+ + D E +F+RC+RVS+LVG+G +ENY P
Sbjct: 322 YSEPLENWNPPRFYVEEAKWVRIDESLDGDYDDDDEFVSFARCVRVSKLVGIGVVENYYP 381
Query: 121 NRVAMQFGMDQDIP 134
NRVAMQFG+ QD+P
Sbjct: 382 NRVAMQFGLAQDVP 395
>AT1G50790.1 | Symbols: | Plant mobile domain protein family |
chr1:18824050-18826488 REVERSE LENGTH=812
Length = 812
Score = 89.4 bits (220), Expect = 7e-19, Method: Composition-based stats.
Identities = 52/137 (37%), Positives = 78/137 (56%), Gaps = 6/137 (4%)
Query: 1 MKLRVTLWAPFQLVQVWALERFPALQPNPCPVRQGQPIMAKWDRVXXXXXXXXXXILDDA 60
+K+ + L + +LV VW ERF ALQ P + +G+P +A W+ + IL+++
Sbjct: 257 IKVEIDLSSLCKLVNVWIWERFRALQSKPNLLLKGEPRLALWNDLKQRTSNAKR-ILNNS 315
Query: 61 GSRNGFLWRPYQNSPPLY----LYNEKDMWMCDNPCFDDELQAFSRCLRVSELVGMGCIE 116
+GF W PY + + Y EK W+ P DDE +F+RC+ VS+LVG+ +E
Sbjct: 316 -KIDGFEWCPYTKTVKNWDFPQFYPEKATWVTLVPNRDDEFISFARCIMVSQLVGIDSLE 374
Query: 117 NYRPNRVAMQFGMDQDI 133
+Y PNRVA QFG QD+
Sbjct: 375 HYYPNRVASQFGRLQDV 391
>AT1G50750.1 | Symbols: | Plant mobile domain protein family |
chr1:18809184-18812050 REVERSE LENGTH=816
Length = 816
Score = 63.9 bits (154), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 21/106 (19%)
Query: 29 PCPVRQGQPIMAKWDRVXXXXXXXXXXILDDAGSRNGFLWRPYQNSPPLYLYNEKDMWMC 88
P P+ +G+P +A W +G L R L +W+
Sbjct: 234 PNPLLKGEPRLALW---------------------HGLLQRTSDARQILDSLKIDTVWIP 272
Query: 89 DNPCFDDELQAFSRCLRVSELVGMGCIENYRPNRVAMQFGMDQDIP 134
+P D E +F+RC++VS+LVG+ +E+Y PNRVA QFGM QD+P
Sbjct: 273 ASPNLDVEFVSFARCIKVSQLVGIDNVEHYFPNRVASQFGMLQDVP 318