Miyakogusa Predicted Gene

Lj6g3v0898670.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0898670.1 Non Chatacterized Hit- tr|D8QPV9|D8QPV9_SELML
Putative uncharacterized protein OS=Selaginella
moelle,31.16,2e-18,seg,NULL,
NODE_85104_length_1265_cov_8.649012.path2.1
         (375 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G50910.1 | Symbols:  | unknown protein; Has 1105 Blast hits t...   236   2e-62

>AT1G50910.1 | Symbols:  | unknown protein; Has 1105 Blast hits to
           802 proteins in 217 species: Archae - 2; Bacteria - 177;
           Metazoa - 445; Fungi - 210; Plants - 58; Viruses - 6;
           Other Eukaryotes - 207 (source: NCBI BLink). |
           chr1:18867083-18869839 REVERSE LENGTH=500
          Length = 500

 Score =  236 bits (602), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 134/248 (54%), Positives = 171/248 (68%), Gaps = 2/248 (0%)

Query: 3   TEFETIEGRITCMLSQLQSECGILHRMVYKNKNQHRRCGYFQXXXXXXXXXXXXQSANLE 62
           T+ + +E ++   LSQL+ E  +  RMVYKNKNQHRRC YFQ            ++AN+E
Sbjct: 4   TQVKALEEKLKSQLSQLELEQAVFERMVYKNKNQHRRCSYFQYLLKVRRELRLLRTANME 63

Query: 63  ELVTSCFLVIKGDRPKQKVHLLESLKRRKCDGEKHNFLERLLGAARLLSEMVEAILKAAT 122
            ++  CF VI G   KQK+H+LESLK +K D  K N LERLLGA RLLS+M E ILKAA+
Sbjct: 64  GMLRPCFHVISGRISKQKIHVLESLKLKKSDTGKPNILERLLGALRLLSQMTEPILKAAS 123

Query: 123 EISVLFARSFFMGFSVTIMALLARLRVLVQQILLDVVSLFNMVSSLSRKKQSIKISHEKV 182
            IS L ARSFF+GFSVT +ALLARLRVLVQQILLD VS+FN V+S S KKQS+KI+ + V
Sbjct: 124 GISTLLARSFFIGFSVTFLALLARLRVLVQQILLDAVSVFNSVTSTSLKKQSVKIAQDGV 183

Query: 183 EVFREFYPVSADFVT-LKCVWESDKFILLETKHKWESENQIE-NSGGNFSVQASGVNYSS 240
           EVFREFYP   + VT L CVW++DK++LLET    E+   +E N   + + + S V Y +
Sbjct: 184 EVFREFYPKEEECVTLLDCVWKTDKYVLLETLQNSENSKPMEKNVSEDVTTRDSLVQYQT 243

Query: 241 IMSILGDD 248
            +S L +D
Sbjct: 244 SVSSLAED 251