Miyakogusa Predicted Gene

Lj6g3v0896480.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0896480.1 Non Chatacterized Hit- tr|I1N0T6|I1N0T6_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,90.21,0,TRYPTOPHAN
SYNTHASE BETA CHAIN,Tryptophan synthase, beta chain; SER/THR
DEHYDRATASE, TRP SYNTHASE,NU,CUFF.58445.1
         (470 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G27070.1 | Symbols: TSB2 | tryptophan synthase beta-subunit 2...   785   0.0  
AT5G54810.1 | Symbols: TSB1, TRPB, TRP2, ATTSB1 | tryptophan syn...   773   0.0  
AT5G28237.1 | Symbols:  | Pyridoxal-5'-phosphate-dependent enzym...   549   e-156
AT5G38530.1 | Symbols: TSBtype2 | tryptophan synthase beta type ...   129   6e-30

>AT4G27070.1 | Symbols: TSB2 | tryptophan synthase beta-subunit 2 |
           chr4:13586564-13588619 FORWARD LENGTH=475
          Length = 475

 Score =  785 bits (2026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/471 (82%), Positives = 424/471 (90%), Gaps = 14/471 (2%)

Query: 2   ATSSIASLNSPSRLLSIPK-EPYPSSHFSSNLLKFAAPRTPSSSVSCSLTRDPASVLPLE 60
           A+S +  L SPS+L   PK  P PS+   S+          S SVSC++ +DPA V+   
Sbjct: 17  ASSELTHLRSPSKL---PKFTPLPSARSRSSS---------SFSVSCTIAKDPAVVMADS 64

Query: 61  QRVEL-NNGALLHQRPDSFGRFGKFGGKYVPETLMHALTELEAAFHSLTADEDFQRELAG 119
           ++++   +   + QRPDSFGRFGKFGGKYVPETLMHAL+ELE AF+SL  DEDFQRELA 
Sbjct: 65  EKIKAAGSDPTMWQRPDSFGRFGKFGGKYVPETLMHALSELETAFYSLATDEDFQRELAE 124

Query: 120 ILKDYVGRESPLYFAERLTEHYKRPNGEGPHIYLKREDLNHTGAHKINNAVAQALLAKSL 179
           ILKDYVGRESPLYFAERLTEHY+R NGEGP IYLKREDLNHTGAHKINNAVAQALLAK L
Sbjct: 125 ILKDYVGRESPLYFAERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRL 184

Query: 180 GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHA 239
           GKKRIIAETGAGQHGVATATVCARFGL+CIIYMGAQDMERQALNVFRMRLLGAEVR VH+
Sbjct: 185 GKKRIIAETGAGQHGVATATVCARFGLQCIIYMGAQDMERQALNVFRMRLLGAEVRGVHS 244

Query: 240 GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIGKETRKQALEKWG 299
           GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVR+FHAVIGKETRKQA+EKWG
Sbjct: 245 GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQAMEKWG 304

Query: 300 GLPDVLIACVGGGSNAMGLFHEFVDDKDVRLIGVEAAGFGLDSGKHAATLTKGEVGVLHG 359
           G PDVL+ACVGGGSNAMGLFHEFVDD +VR+IGVEAAGFGLDSGKHAATLTKG+VGVLHG
Sbjct: 305 GKPDVLVACVGGGSNAMGLFHEFVDDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHG 364

Query: 360 AMSYLLQDDDGQIVEPHSISAGLDYPGVGPEHSFLKDLGRAEYYSITDEEALEAFKRVSR 419
           AMSYLLQDDDGQI+EPHSISAGLDYPGVGPEHSFLKD+GRAEY+S+TDEEALEAFKRVSR
Sbjct: 365 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDVGRAEYFSVTDEEALEAFKRVSR 424

Query: 420 LEGIIPALETSHALAYLEKVCPTLPNGTKVVLNFSGRGDKDVQTAIKYLKV 470
           LEGIIPALETSHALA+LEK+CPTLP+G +VVLNFSGRGDKDVQTAIKYL+V
Sbjct: 425 LEGIIPALETSHALAHLEKLCPTLPDGARVVLNFSGRGDKDVQTAIKYLEV 475


>AT5G54810.1 | Symbols: TSB1, TRPB, TRP2, ATTSB1 | tryptophan
           synthase beta-subunit 1 | chr5:22264805-22266738 REVERSE
           LENGTH=470
          Length = 470

 Score =  773 bits (1996), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/424 (87%), Positives = 395/424 (93%), Gaps = 6/424 (1%)

Query: 47  CSLTRDPASVLPLEQRVELNNGALLHQRPDSFGRFGKFGGKYVPETLMHALTELEAAFHS 106
           C++ +DP  ++         +   L QRPDSFGRFGKFGGKYVPETLMHAL+ELE+AF++
Sbjct: 53  CTIAKDPPVLMAA------GSDPALWQRPDSFGRFGKFGGKYVPETLMHALSELESAFYA 106

Query: 107 LTADEDFQRELAGILKDYVGRESPLYFAERLTEHYKRPNGEGPHIYLKREDLNHTGAHKI 166
           L  D+DFQRELAGILKDYVGRESPLYFAERLTEHY+R NGEGP IYLKREDLNHTGAHKI
Sbjct: 107 LATDDDFQRELAGILKDYVGRESPLYFAERLTEHYRRENGEGPLIYLKREDLNHTGAHKI 166

Query: 167 NNAVAQALLAKSLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFR 226
           NNAVAQALLAK LGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFR
Sbjct: 167 NNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFR 226

Query: 227 MRLLGAEVRPVHAGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVI 286
           MRLLGAEVR VH+GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVR+FHAVI
Sbjct: 227 MRLLGAEVRGVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVI 286

Query: 287 GKETRKQALEKWGGLPDVLIACVGGGSNAMGLFHEFVDDKDVRLIGVEAAGFGLDSGKHA 346
           GKETRKQALEKWGG PDVL+ACVGGGSNAMGLFHEFV+D +VR+IGVEAAGFGLDSGKHA
Sbjct: 287 GKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHEFVNDTEVRMIGVEAAGFGLDSGKHA 346

Query: 347 ATLTKGEVGVLHGAMSYLLQDDDGQIVEPHSISAGLDYPGVGPEHSFLKDLGRAEYYSIT 406
           ATLTKG+VGVLHGAMSYLLQDDDGQI+EPHSISAGLDYPGVGPEHSF KD+GRAEYYSIT
Sbjct: 347 ATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFFKDMGRAEYYSIT 406

Query: 407 DEEALEAFKRVSRLEGIIPALETSHALAYLEKVCPTLPNGTKVVLNFSGRGDKDVQTAIK 466
           DEEALEAFKRVSRLEGIIPALETSHALAYLEK+CPTL +GT+VVLNFSGRGDKDVQT  K
Sbjct: 407 DEEALEAFKRVSRLEGIIPALETSHALAYLEKLCPTLSDGTRVVLNFSGRGDKDVQTVAK 466

Query: 467 YLKV 470
           YL V
Sbjct: 467 YLDV 470


>AT5G28237.1 | Symbols:  | Pyridoxal-5'-phosphate-dependent enzyme
           family protein | chr5:10207477-10213542 REVERSE
           LENGTH=465
          Length = 465

 Score =  549 bits (1414), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 260/396 (65%), Positives = 321/396 (81%), Gaps = 6/396 (1%)

Query: 74  RPDSFGRFGKFGGKYVPETLMHALTELEAAFHSLTADEDFQRELAGILKDYVGRESPLYF 133
           R D  G+FG+FGGK+VPETLM  L ELE  F+ +  D +FQ EL   L+DYVGRE+PLYF
Sbjct: 65  RGDGNGKFGRFGGKFVPETLMSRLIELEDEFNFVRCDHEFQEELTTALRDYVGRETPLYF 124

Query: 134 AERLTEHYKR--PNGEG-PHIYLKREDLNHTGAHKINNAVAQALLAKSLGKKRIIAETGA 190
           AERLTEHYK   P  EG P IYLKREDL+H G+HKINNA+AQA++++ LG  R++A TGA
Sbjct: 125 AERLTEHYKNIVPTIEGGPEIYLKREDLSHCGSHKINNALAQAMISRRLGCSRVVAATGA 184

Query: 191 GQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHAGTATLKDATSE 250
           GQHGVATA  CA+  LEC ++MGA D+E+Q+ NV  M+LLGA+V  V     T KDA+SE
Sbjct: 185 GQHGVATAAACAKLSLECTVFMGAADIEKQSFNVLSMKLLGAQVISVEG---TFKDASSE 241

Query: 251 AIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIGKETRKQALEKWGGLPDVLIACVG 310
           AIR+WV N+ TT+Y+ G+V GPHP P++VREF +VIGKETR+QA + WGG PDVL+ACVG
Sbjct: 242 AIRNWVENLYTTYYLSGTVVGPHPCPIIVREFQSVIGKETRRQAKQLWGGKPDVLVACVG 301

Query: 311 GGSNAMGLFHEFVDDKDVRLIGVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYLLQDDDG 370
            GSNA+GLFHEFV D+DVRL+GVEAAG GLDSGKH+ATL  G+VGV HG+MSYLLQDD G
Sbjct: 302 SGSNALGLFHEFVGDEDVRLVGVEAAGLGLDSGKHSATLAFGDVGVYHGSMSYLLQDDQG 361

Query: 371 QIVEPHSISAGLDYPGVGPEHSFLKDLGRAEYYSITDEEALEAFKRVSRLEGIIPALETS 430
           QI++PHS+  GL+YPGVGPE SF+K+ GRAE+Y+ TDEEA++A  R+SRLEGIIPALE S
Sbjct: 362 QILKPHSVGVGLEYPGVGPEISFMKETGRAEFYTATDEEAIQACMRLSRLEGIIPALEAS 421

Query: 431 HALAYLEKVCPTLPNGTKVVLNFSGRGDKDVQTAIK 466
           HALA+L+K+ PTL +G KVV+N SGRGDKD+ T I+
Sbjct: 422 HALAFLDKLVPTLRDGAKVVVNCSGRGDKDLDTLIQ 457


>AT5G38530.1 | Symbols: TSBtype2 | tryptophan synthase beta type 2 |
           chr5:15424097-15426294 FORWARD LENGTH=506
          Length = 506

 Score =  129 bits (323), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 166/381 (43%), Gaps = 40/381 (10%)

Query: 112 DFQRELAGILKDYVGRESPLYFAERLTEHYKRPNGEGPHIYLKREDLNHTGAHKINNAVA 171
           D   E+  I K +  R +PL  A+RL +  + P      IY K E  +  G+HK N AV 
Sbjct: 119 DIPEEVLEIYKLW--RPTPLIRAKRLEKLLQTPA----RIYFKYEGGSPAGSHKPNTAVP 172

Query: 172 QALLAKSLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLG 231
           QA      G K ++ ETGAGQ G + A   + FGL+C ++  A     +      M+  G
Sbjct: 173 QAYYNAKEGVKNVVTETGAGQWGSSLAFASSLFGLDCEVWQVANSYHTKPYRRLMMQTWG 232

Query: 232 AEVRP-----VHAGTATLKD----------ATSEAIRDWVTNVETTHYILGSVAGPHPYP 276
           A+V P       AG   L+           A SEA+     N E T Y LGSV       
Sbjct: 233 AKVHPSPSDLTEAGRRILESDPSSPGSLGIAISEAVEVAARN-EDTKYCLGSVLN----- 286

Query: 277 MMVREFHAVIGKETRKQALEKWGGLPDVLIACVGGGSNAMGLFHEFVDDKDVRLIGVEAA 336
             V     +IG+E  +Q +E +G  PD++I C GGGSN  GL   F+ +K   L G    
Sbjct: 287 -HVLLHQTIIGEECIQQ-MENFGETPDLIIGCTGGGSNFAGLSFPFIREK---LKGKINP 341

Query: 337 GFGLDSGKHAATLTKG----EVGVLHGAMSYLLQDDDGQIVEPHSISA-GLDYPGVGPEH 391
                      +LTKG    + G   G    +     G    P  I A GL Y G+ P  
Sbjct: 342 VIRAVEPSACPSLTKGVYAYDFGDTAGLTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLI 401

Query: 392 SFLKDLGRAEYYSITDEEALEAFKRVSRLEGIIPALETSHALAYLEK---VCPTLPNGTK 448
           S + + G  E  SI   E  +   + +R EGIIPA E +HA+A   +    C        
Sbjct: 402 SHVYEQGFMEAISIPQIECFQGAIQFARTEGIIPAPEPTHAIAATIREALRCKETGEAKV 461

Query: 449 VVLNFSGRGDKDVQTAIKYLK 469
           +++   G G  D+ +  KYLK
Sbjct: 462 ILMAMCGHGHFDLTSYDKYLK 482