Miyakogusa Predicted Gene

Lj6g3v0873250.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0873250.1 tr|G7IY17|G7IY17_MEDTR HAUS augmin-like complex
subunit OS=Medicago truncatula GN=MTR_3g052180 PE=4
,86.11,0,Q8GYM3_ARATH_Q8GYM3;,NULL; coiled-coil,NULL;
seg,NULL,NODE_31631_length_1368_cov_42.825291.path2.1
         (253 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G50710.1 | Symbols:  | unknown protein; Has 109 Blast hits to...   229   1e-60

>AT1G50710.1 | Symbols:  | unknown protein; Has 109 Blast hits to
           109 proteins in 44 species: Archae - 0; Bacteria - 2;
           Metazoa - 61; Fungi - 8; Plants - 36; Viruses - 0; Other
           Eukaryotes - 2 (source: NCBI BLink). |
           chr1:18784719-18787615 REVERSE LENGTH=423
          Length = 423

 Score =  229 bits (584), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/252 (54%), Positives = 160/252 (63%), Gaps = 4/252 (1%)

Query: 1   MVEEYQQAISMSSLGGIRDTGGLYPQLGLRNSPQVYQTLEHQMVVAEAAQRLRLPLISKD 60
           MVEEYQQAIS+++ GGIRD  GLYPQLGL+NSPQVY+TLEH++VVAEAAQ+LRLPLIS  
Sbjct: 70  MVEEYQQAISVANHGGIRDVQGLYPQLGLKNSPQVYETLEHRLVVAEAAQKLRLPLISDG 129

Query: 61  GEVHDEDIEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGANSSLAAMDPVEPG 120
           GE+H+E+IEK                                       SL+A+D     
Sbjct: 130 GEIHEEEIEKWSILSRSSLDSASTSFTISSTSNSVNYANSSANSVAGGISLSAVDT--DV 187

Query: 121 VGGVPSRFLGITPSYLWQTQHQQTPLSVDMTEYRMSLSREVEARLKMKCDMLLEAFILXX 180
           VGGVP+RFLGITP+YL   Q Q T +S+DM +Y+M L+RE+E RLK KCD L +A I+  
Sbjct: 188 VGGVPNRFLGITPAYLSYVQLQNT-ISMDMADYQMFLAREIEGRLKEKCDKLADA-IVDD 245

Query: 181 XXXXXXXXXXXXRLPERVKLXXXXXXXXXXXXXXXLYSADRKFAEYYNVLEQILGVLIKL 240
                       RLPERVK                LYSADRKFAEYYNVLEQILGVLIKL
Sbjct: 246 TDSSTGNRNSSARLPERVKFIIEEIERDEAALREDLYSADRKFAEYYNVLEQILGVLIKL 305

Query: 241 VKDLKLEHQHKY 252
           VKDLKLEHQHKY
Sbjct: 306 VKDLKLEHQHKY 317