Miyakogusa Predicted Gene

Lj6g3v0871210.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0871210.1 Non Chatacterized Hit- tr|I3S7M7|I3S7M7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,92.68,0.00000000000006, ,CUFF.58419.1
         (45 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G26965.1 | Symbols:  | NADH:ubiquinone oxidoreductase, 17.2kD...    55   1e-08

>AT4G26965.1 | Symbols:  | NADH:ubiquinone oxidoreductase, 17.2kDa
          subunit | chr4:13539717-13542041 FORWARD LENGTH=184
          Length = 184

 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/41 (58%), Positives = 32/41 (78%)

Query: 1  MRRVFGRIAGLFSNRNFEGVDKAGNKYFTRKEQIDGSSNER 41
          M R++ R AGLFS+++F GVDK GNKYF+R E+IDG   E+
Sbjct: 1  MSRLWARFAGLFSSKSFIGVDKTGNKYFSRMEEIDGFVKEK 41