Miyakogusa Predicted Gene

Lj6g3v0870190.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0870190.1 tr|G7IY23|G7IY23_MEDTR ATP synthase gamma chain
OS=Medicago truncatula GN=MTR_3g052270 PE=3 SV=1,79.08,0,no
description,NULL; ATP-synt,ATPase, F1 complex, gamma subunit;
seg,NULL; ATPsyn_F1gamma: ATP synth,CUFF.58416.1
         (306 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G15700.1 | Symbols: ATPC2 | ATPase, F1 complex, gamma subunit...   401   e-112
AT4G04640.1 | Symbols: ATPC1 | ATPase, F1 complex, gamma subunit...   385   e-107
AT2G33040.1 | Symbols: ATP3 | gamma subunit of Mt ATP synthase |...    77   2e-14

>AT1G15700.1 | Symbols: ATPC2 | ATPase, F1 complex, gamma subunit
           protein | chr1:5402629-5403789 REVERSE LENGTH=386
          Length = 386

 Score =  401 bits (1031), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/286 (70%), Positives = 233/286 (81%), Gaps = 3/286 (1%)

Query: 18  NGRPFSETLAEMLHDINDRVRDDDVEVTLCNXXXXXXXXXXXXTGDRGLCGGFNNAVVKK 77
            GRPF+ETL E+L+ IN   + +D++  L              TGD+GLCGGFNNAV KK
Sbjct: 100 KGRPFTETLVEILYSINQSAQLEDIDFPLSIVRPVKRVALVVVTGDKGLCGGFNNAVTKK 159

Query: 78  AQTRIEELRKLGLDCVVISVGKKGNSFFSRRDFVEVDRFVDNGG-FPTTKDAQTIADDVF 136
           A  R++EL++ G+DCVVISVGKKGN++FSRRD  +VD+ ++ GG FPTTK+AQ IADDVF
Sbjct: 160 ATLRVQELKQRGIDCVVISVGKKGNAYFSRRDEFDVDKCIEGGGVFPTTKEAQVIADDVF 219

Query: 137 SLFVSEEVDKVELVFTKFVSLVKFDPVIQTLLPLSRKGEVCDVNGNSVDAIDDEYFRLTS 196
           SLFVSEEVDKVELV+TKFVSLVK DPVI TLLPLS KGE CDV G  VDAI+DE FRLTS
Sbjct: 220 SLFVSEEVDKVELVYTKFVSLVKSDPVIHTLLPLSMKGESCDVKGECVDAIEDEMFRLTS 279

Query: 197 KDGKLALERGVVGMEKKSDGCVPIMEFEQDPVQILDAMMPLYLNSQILRSLQESLASELA 256
           KDGKLA+ER  + +EK      P+M+FEQDPVQILDAMMPLYLNSQILR+LQESLASELA
Sbjct: 280 KDGKLAVERTKLEVEKPE--ISPLMQFEQDPVQILDAMMPLYLNSQILRALQESLASELA 337

Query: 257 ARMGAMSNATDNAIELTKNLSVAYNRERQAKITGELLEIVAGAEAL 302
           +RM AMSNATDNA+EL KNL++AYNR RQAKITGELLEIVAGAEAL
Sbjct: 338 SRMNAMSNATDNAVELKKNLTMAYNRARQAKITGELLEIVAGAEAL 383


>AT4G04640.1 | Symbols: ATPC1 | ATPase, F1 complex, gamma subunit
           protein | chr4:2350761-2351882 REVERSE LENGTH=373
          Length = 373

 Score =  385 bits (990), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 186/301 (61%), Positives = 233/301 (77%), Gaps = 2/301 (0%)

Query: 1   MKLXXXXXXXXXXXXXXNGRPFSETLAEMLHDINDRVRDDDVEVTLCNXXXXXXXXXXXX 60
           MKL              NGRPFSETL E+L++IN++++ DDV+V L              
Sbjct: 73  MKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTDDVDVPLTKVRPVKKVALVVV 132

Query: 61  TGDRGLCGGFNNAVVKKAQTRIEELRKLGLDCVVISVGKKGNSFFSRRDFVEVDRFVDNG 120
           TGDRGLCGGFNN ++KKA+ RI+EL+ LGL+  VISVGKKGNS+F RR ++ VD++++ G
Sbjct: 133 TGDRGLCGGFNNFIIKKAEARIKELKGLGLEYTVISVGKKGNSYFLRRPYIPVDKYLEAG 192

Query: 121 GFPTTKDAQTIADDVFSLFVSEEVDKVELVFTKFVSLVKFDPVIQTLLPLSRKGEVCDVN 180
             PT K+AQ +ADDVFSLF+SEEVDKVEL++TKFVSLVK +PVI TLLPLS KGE+CD+N
Sbjct: 193 TLPTAKEAQAVADDVFSLFISEEVDKVELLYTKFVSLVKSEPVIHTLLPLSPKGEICDIN 252

Query: 181 GNSVDAIDDEYFRLTSKDGKLALERGVVGMEKKSDGCVPIMEFEQDPVQILDAMMPLYLN 240
           G  VDA +DE+FRLT+K+GKL +ER        +    PI++FEQDPVQILDA++PLYLN
Sbjct: 253 GTCVDAAEDEFFRLTTKEGKLTVERET--FRTPTADFSPILQFEQDPVQILDALLPLYLN 310

Query: 241 SQILRSLQESLASELAARMGAMSNATDNAIELTKNLSVAYNRERQAKITGELLEIVAGAE 300
           SQILR+LQESLASELAARM AMS+A+DNA +L K+LS+ YNR+RQAKITGE+LEIVAGA 
Sbjct: 311 SQILRALQESLASELAARMSAMSSASDNASDLKKSLSMVYNRKRQAKITGEILEIVAGAN 370

Query: 301 A 301
           A
Sbjct: 371 A 371


>AT2G33040.1 | Symbols: ATP3 | gamma subunit of Mt ATP synthase |
           chr2:14018978-14021047 REVERSE LENGTH=325
          Length = 325

 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 51/252 (20%)

Query: 61  TGDRGLCGGFNNAVVKKAQTRIEELRKLGL----DCVVISVGKKGNSFF---SRRDFV-E 112
           + D+GLCGG N+ VVK ++     L KL      +   + VG+K  +     S+ D V  
Sbjct: 111 SSDKGLCGGINSTVVKVSRA----LYKLNAGPEKEVQFVIVGEKAKAIMFRDSKNDIVLS 166

Query: 113 VDRFVDNGGFP-TTKDAQTIADDVFSLFVSEEVDKVELVFTKFVSLVKFDPVIQTLLPLS 171
           V     N   P        +ADD+     + E D + +V+ KF S+V F P + T+L   
Sbjct: 167 VTELNKN---PLNYAQVSVLADDILK---NVEFDALRIVYNKFHSVVAFLPTVSTVL--- 217

Query: 172 RKGEVCDVNGNSVDAIDDEYFRLTSKDGKL-ALERGVVGMEKKSDGCVPIMEFEQDPVQI 230
                      S + I+ E   +  K G+L + E  + G E K +    + EF+   V  
Sbjct: 218 -----------SPEIIEKES-EIGGKLGELDSYE--IEGGETKGEILQNLAEFQFSCV-- 261

Query: 231 LDAMMPLYLNSQILRSLQESLASELAARMGAMSNATDNAIELTKNLSVAYNRERQAKITG 290
                       +  ++ E+  SE+ ARM AM +++ NA E+   L++ YNR RQA IT 
Sbjct: 262 ------------MFNAVLENACSEMGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITT 309

Query: 291 ELLEIVAGAEAL 302
           EL+EI++GA AL
Sbjct: 310 ELIEIISGASAL 321