Miyakogusa Predicted Gene

Lj6g3v0857960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0857960.1 Non Chatacterized Hit- tr|A5B928|A5B928_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,60.98,2e-19,seg,NULL; QUINONE OXIDOREDUCTASE, BACTERIA AND
PLANT,NULL; ALCOHOL DEHYDROGENASE RELATED,Alcohol deh,CUFF.58575.1
         (147 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G61510.1 | Symbols:  | GroES-like zinc-binding alcohol dehydr...    98   2e-21

>AT5G61510.1 | Symbols:  | GroES-like zinc-binding alcohol
           dehydrogenase family protein | chr5:24737084-24738975
           REVERSE LENGTH=406
          Length = 406

 Score = 98.2 bits (243), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 86  DLVGYAGQPIGSYVEEQILHAGKVVPIPSSIDPSVAASVMLKGMTAQFLLRRCFKV 141
           DLV YAG P+G+Y EEQIL A KVVP+PSSIDP VAAS+MLKGMTAQFLLRRCFKV
Sbjct: 165 DLVAYAGNPMGAYAEEQILPADKVVPVPSSIDPIVAASIMLKGMTAQFLLRRCFKV 220