Miyakogusa Predicted Gene

Lj6g3v0857610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0857610.1 tr|G7J004|G7J004_MEDTR Small heat shock protein
OS=Medicago truncatula GN=MTR_3g052760 PE=3 SV=1,76.79,0,no
description,NULL; HSP20,Alpha crystallin/Hsp20 domain; HEAT SHOCK
PROTEIN 26,NULL; SMALL HEAT-SHO,CUFF.58405.1
         (235 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G27670.1 | Symbols: HSP21 | heat shock protein 21 | chr4:1381...   120   1e-27
AT1G52560.1 | Symbols:  | HSP20-like chaperones superfamily prot...    81   7e-16
AT1G52560.2 | Symbols:  | HSP20-like chaperones superfamily prot...    77   8e-15
AT4G25200.1 | Symbols: ATHSP23.6-MITO, HSP23.6-MITO | mitochondr...    74   1e-13
AT5G51440.1 | Symbols:  | HSP20-like chaperones superfamily prot...    71   6e-13
AT1G07400.1 | Symbols:  | HSP20-like chaperones superfamily prot...    54   9e-08
AT1G59860.1 | Symbols:  | HSP20-like chaperones superfamily prot...    53   2e-07
AT4G10250.1 | Symbols: ATHSP22.0 | HSP20-like chaperones superfa...    52   3e-07
AT1G53540.1 | Symbols:  | HSP20-like chaperones superfamily prot...    50   2e-06
AT5G37670.1 | Symbols:  | HSP20-like chaperones superfamily prot...    49   3e-06
AT5G12020.1 | Symbols: HSP17.6II | 17.6 kDa class II heat shock ...    47   1e-05

>AT4G27670.1 | Symbols: HSP21 | heat shock protein 21 |
           chr4:13819048-13819895 REVERSE LENGTH=227
          Length = 227

 Score =  120 bits (300), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 97/166 (58%), Gaps = 19/166 (11%)

Query: 70  SPRVLLNQFPVARTLQQMMDTMDRIVENPLVYSGTSPLVVVGDDEYSKGKIPWAIKEGQK 129
           SP  LL+     RT++QM+DTMDR+ E+ +  SG +     G    S+ + PW IKE + 
Sbjct: 81  SPFGLLDPLSPMRTMRQMLDTMDRMFEDTMPVSGRN----RGGSGVSEIRAPWDIKEEEH 136

Query: 130 DYKMRFNMPGMSKNDVKVWIEENMLVVKAEKVSREQHHESQANGSEELSPEHEDWPANSY 189
           + KMRF+MPG+SK DVK+ +E+N+LV+K E+  +E   +S              W   S 
Sbjct: 137 EIKMRFDMPGLSKEDVKISVEDNVLVIKGEQ-KKEDSDDS--------------WSGRSV 181

Query: 190 GRYNHRIALPEKIEFEKIMAQVKDGVLYITIPKANTSAKIIGIDVQ 235
             Y  R+ LP+  E +KI A++K+GVL+ITIPK     K+I + +Q
Sbjct: 182 SSYGTRLQLPDNCEKDKIKAELKNGVLFITIPKTKVERKVIDVQIQ 227


>AT1G52560.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:19574783-19575766 REVERSE LENGTH=232
          Length = 232

 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 36/195 (18%)

Query: 48  EASLQRAKLQQQLQPRMKGSQASPR---------VLLNQF---PVARTLQQMMDTMDRIV 95
           E S+   K  +Q  PR +G ++  R           LN+F    +  TL Q  + M+RI 
Sbjct: 56  EVSVSEKKSPRQNFPRRRGRKSLWRNTDDHGYFTPTLNEFFPPTIGNTLIQATENMNRIF 115

Query: 96  ENPLVYSGTSPLVVVGDDEYSKGKIPWAIKEGQKDYKMRFNMPGMSKNDVKVWIEENMLV 155
           +N  V    +P  ++G            +KE    YK+R+ +PG++K DVK+ + + +L 
Sbjct: 116 DNFNV----NPFQLMG-----------QVKEQDDCYKLRYEVPGLTKEDVKITVNDGILT 160

Query: 156 VKAEKVSREQHHESQANGSEELSPEHEDWPANSYGRYNHRIALPEKIEFEKIMAQVKDGV 215
           +K +      H   +  GS E   E E W + SYG YN  ++LP+  + E I A++K+GV
Sbjct: 161 IKGD------HKAEEEKGSPE---EDEYWSSKSYGYYNTSLSLPDDAKVEDIKAELKNGV 211

Query: 216 LYITIPKANTSAKII 230
           L + IP+     K +
Sbjct: 212 LNLVIPRTEKPKKNV 226


>AT1G52560.2 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:19574783-19575766 REVERSE LENGTH=225
          Length = 225

 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 24/150 (16%)

Query: 81  ARTLQQMMDTMDRIVENPLVYSGTSPLVVVGDDEYSKGKIPWAIKEGQKDYKMRFNMPGM 140
             TL Q  + M+RI +N  V    +P  ++G            +KE    YK+R+ +PG+
Sbjct: 94  GNTLIQATENMNRIFDNFNV----NPFQLMG-----------QVKEQDDCYKLRYEVPGL 138

Query: 141 SKNDVKVWIEENMLVVKAEKVSREQHHESQANGSEELSPEHEDWPANSYGRYNHRIALPE 200
           +K DVK+ + + +L +K +      H   +  GS E   E E W + SYG YN  ++LP+
Sbjct: 139 TKEDVKITVNDGILTIKGD------HKAEEEKGSPE---EDEYWSSKSYGYYNTSLSLPD 189

Query: 201 KIEFEKIMAQVKDGVLYITIPKANTSAKII 230
             + E I A++K+GVL + IP+     K +
Sbjct: 190 DAKVEDIKAELKNGVLNLVIPRTEKPKKNV 219


>AT4G25200.1 | Symbols: ATHSP23.6-MITO, HSP23.6-MITO |
           mitochondrion-localized small heat shock protein 23.6 |
           chr4:12917089-12917858 FORWARD LENGTH=210
          Length = 210

 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 32/217 (14%)

Query: 14  TSCRMNKLSSVKLLPLSRT------RKRTF-CNNVKAMAGDEASLQRAKLQQQLQPRMKG 66
           ++  + +L S  + P SR+        R F  N V++   D  +     L ++  PR +G
Sbjct: 3   SALALKRLLSSSIAPRSRSVLRPAVSSRLFNTNAVRSYDDDGENGDGVDLYRRSVPRRRG 62

Query: 67  SQASPRVLLNQFPVARTLQQMMDTMDRIVENPLVYSGTSPLVVVGDDEYSKGKIPWAIKE 126
              S   + + F   R++ Q+++ MD+ +ENPL+ S T  +   G       +  W IKE
Sbjct: 63  DFFSD--VFDPFSPTRSVSQVLNLMDQFMENPLL-SATRGMGASG------ARRGWDIKE 113

Query: 127 GQKDYKMRFNMPGMSKNDVKVWIEENMLVVKAEKVSREQHHESQANGSEELSPEHEDWPA 186
                 +R +MPG+S+ DVK+ +E++ LV++ E  + E   E   +G+            
Sbjct: 114 KDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGNR----------- 162

Query: 187 NSYGRYNHRIALPEKI-EFEKIMAQVKDGVLYITIPK 222
               R+  RI LP+KI + ++I A++K+GVL + IPK
Sbjct: 163 ----RFTSRIGLPDKIYKIDEIKAEMKNGVLKVVIPK 195


>AT5G51440.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr5:20891242-20892013 FORWARD LENGTH=210
          Length = 210

 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 81/150 (54%), Gaps = 25/150 (16%)

Query: 74  LLNQFPVARTLQQMMDTMDRIVENPLVYSGTSPLVVVGDDEYSKGKIPWAIKEGQKDYKM 133
           +L+ F   R+L QM++ MD++ E PLV S T  +   G     +G   W +KE      +
Sbjct: 70  ILDPFTPTRSLSQMLNFMDQVSEIPLV-SATRGMGASG---VRRG---WNVKEKDDALHL 122

Query: 134 RFNMPGMSKNDVKVWIEENMLVVKAEKVSREQHHESQANGSEELSPEHEDWPANSYGRYN 193
           R +MPG+S+ DVK+ +E+N LV++ E  + E   +   +G                 R+ 
Sbjct: 123 RIDMPGLSREDVKLALEQNTLVIRGEGETEEG-EDVSGDGR----------------RFT 165

Query: 194 HRIALPEKI-EFEKIMAQVKDGVLYITIPK 222
            RI LPEK+ + ++I A++K+GVL + IPK
Sbjct: 166 SRIELPEKVYKTDEIKAEMKNGVLKVVIPK 195


>AT1G07400.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:2275148-2275621 FORWARD LENGTH=157
          Length = 157

 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 19/124 (15%)

Query: 116 SKGKIPWAIKEGQKDYKMRFNMPGMSKNDVKVWIEENMLVVKAEKVSREQHHESQANGSE 175
           +  ++ W  KE  + +  + ++PGM K +VKV IE++ ++    K+S E+H E +     
Sbjct: 46  TNARVDW--KETAEAHVFKADLPGMKKEEVKVEIEDDSVL----KISGERHVEKEE---- 95

Query: 176 ELSPEHEDWP--ANSYGRYNHRIALPEKIEFEKIMAQVKDGVLYITIPK---ANTSAKII 230
               + + W     S G+++ +  LPE ++ +++ A +++GVL +T+PK   A   A++ 
Sbjct: 96  ----KQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVK 151

Query: 231 GIDV 234
            ID+
Sbjct: 152 SIDI 155


>AT1G59860.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:22031474-22031941 FORWARD LENGTH=155
          Length = 155

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 19/124 (15%)

Query: 116 SKGKIPWAIKEGQKDYKMRFNMPGMSKNDVKVWIEENMLVVKAEKVSREQHHESQANGSE 175
           +  ++ W  KE  + +  + ++PGM K +VKV IE++ ++    K+S E+H E +     
Sbjct: 44  ANARVDW--KETAEAHVFKADLPGMKKEEVKVEIEDDSVL----KISGERHVEKEE---- 93

Query: 176 ELSPEHEDWP--ANSYGRYNHRIALPEKIEFEKIMAQVKDGVLYITIPKANTS---AKII 230
               + + W     S G ++ +  LPE ++ +++ A +++GVL +T+PK  T+   A++ 
Sbjct: 94  ----KQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVLTVTVPKVETNKKKAQVK 149

Query: 231 GIDV 234
            ID+
Sbjct: 150 SIDI 153


>AT4G10250.1 | Symbols: ATHSP22.0 | HSP20-like chaperones
           superfamily protein | chr4:6370537-6371124 FORWARD
           LENGTH=195
          Length = 195

 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 61/107 (57%), Gaps = 12/107 (11%)

Query: 116 SKGKIPWAIKEGQKDYKMRFNMPGMSKNDVKVWIEENMLVVKAEKVSREQHHESQANGSE 175
           S  ++ W  KE  + +++  ++PG+ K++VK+ +EEN ++    +VS E+  E +  G +
Sbjct: 69  SPARVDW--KETAEGHEIMLDIPGLKKDEVKIEVEENGVL----RVSGERKREEEKKGDQ 122

Query: 176 ELSPEHEDWPANSYGRYNHRIALPEKIEFEKIMAQVKDGVLYITIPK 222
               E       SYG++  +  LP+ ++ E + A++++GVL I + K
Sbjct: 123 WHRVER------SYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTK 163


>AT1G53540.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:19980510-19980983 FORWARD LENGTH=157
          Length = 157

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 58/109 (53%), Gaps = 14/109 (12%)

Query: 115 YSKGKIPWAIKEGQKDYKMRFNMPGMSKNDVKVWIEE-NMLVVKAEKVSREQHHESQANG 173
           ++  K+ W  +E  + +  + ++PG+ K +VKV +E+ N+L +  E+ +  +    + + 
Sbjct: 47  FTNAKVDW--RETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHR 104

Query: 174 SEELSPEHEDWPANSYGRYNHRIALPEKIEFEKIMAQVKDGVLYITIPK 222
            E            S G++  R  LPE  + E+I A +++GVL +T+PK
Sbjct: 105 VE-----------RSSGKFTRRFRLPENAKMEEIKASMENGVLSVTVPK 142


>AT5G37670.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr5:14969035-14969448 FORWARD LENGTH=137
          Length = 137

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 14/116 (12%)

Query: 116 SKGKIPWAIKEGQKDYKMRFNMPGMSKNDVKVWIEE-NMLVVKAEKVSREQHHESQANGS 174
           S   I W   E    +  + N+PG +K D+KV IEE N+L ++ E +  E+         
Sbjct: 20  STALIDWM--ESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEK--------K 69

Query: 175 EELSPEHEDWPANSYG--RYNHRIALPEKIEFEKIMAQVKDGVLYITIPKANTSAK 228
           E L     +  A S G   +  RI LPE ++ +++ A V++GVL + +PK +TS+K
Sbjct: 70  ENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVLTVVVPK-DTSSK 124


>AT5G12020.1 | Symbols: HSP17.6II | 17.6 kDa class II heat shock
           protein | chr5:3882409-3882876 REVERSE LENGTH=155
          Length = 155

 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 14/147 (9%)

Query: 75  LNQFPVARTLQQMMDTMDRIVENPLVYSGTSPLVVVGDDEYSKGKIPWAIKEGQKDYKMR 134
           L +FP+   L+ M++  +   ++    +  +P  V   D  +    P  + E    Y   
Sbjct: 3   LGRFPIISILEDMLEVPE---DHNNEKTRNNPSRVYMRDAKAMAATPADVIEHPNAYAFV 59

Query: 135 FNMPGMSKNDVKVWIE-ENMLVVKAEKVSREQHHESQANGSEELSPEHEDWPANSYGRYN 193
            +MPG+  +++KV +E +N+LVV  E+    Q    +  G + +  E         G++ 
Sbjct: 60  VDMPGIKGDEIKVQVENDNVLVVSGER----QRENKENEGVKYVRMER------RMGKFM 109

Query: 194 HRIALPEKIEFEKIMAQVKDGVLYITI 220
            +  LPE  + +KI A   DGVL +T+
Sbjct: 110 RKFQLPENADLDKISAVCHDGVLKVTV 136