Miyakogusa Predicted Gene

Lj6g3v0857600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0857600.1 Non Chatacterized Hit- tr|E3WZJ4|E3WZJ4_ANODA
Uncharacterized protein OS=Anopheles darlingi
GN=AND_1,43.52,6e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; ZINC FINGER
PROTEIN-RELATED,NULL; ZINC_FINGER_C2H2_2,Zinc finger,CUFF.58404.1
         (274 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G40710.1 | Symbols:  | zinc finger (C2H2 type) family protein...   298   4e-81
AT5G63280.1 | Symbols:  | C2H2-like zinc finger protein | chr5:2...   287   6e-78

>AT5G40710.1 | Symbols:  | zinc finger (C2H2 type) family protein |
           chr5:16295091-16296810 FORWARD LENGTH=272
          Length = 272

 Score =  298 bits (762), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 138/224 (61%), Positives = 176/224 (78%), Gaps = 1/224 (0%)

Query: 51  LQQEQDGNHQIHCSRERSRVAWKIIQEYLMPFVEKEKYHISKRCRLHPDNDIYRDQEDHK 110
            +  +DG H+IHCSRERSRVAWKIIQEYLMP+VEKE+Y +   CR+H DNDIYR+QE+HK
Sbjct: 40  FKDPEDGFHEIHCSRERSRVAWKIIQEYLMPYVEKERYQLPSTCRVHRDNDIYREQEEHK 99

Query: 111 SHIDINEWQCGFCKKSFYEEKHLDQHFDNRHSNLLNSSESRCLADVCGALHCDLEINSGS 170
              DINEW+CGFCKK+FYEEK+LD+HFD+RH NLLN+S  +CL+D+CGALHCDL +++  
Sbjct: 100 LRSDINEWRCGFCKKAFYEEKYLDKHFDSRHYNLLNASHGKCLSDLCGALHCDLVVDTAR 159

Query: 171 KKSKCNPAAAARNKHLCESLADSCFPVNEGPAASRLHEFFLHQFCDAHSCTPSGKPFSRG 230
            KSKCNPAAAA+N+HLCESLA+SCFPVN+G +A+RLH+FFL QFCDAH+C+   KP S+ 
Sbjct: 160 LKSKCNPAAAAKNRHLCESLANSCFPVNKGSSANRLHDFFLRQFCDAHTCSGGSKPLSQK 219

Query: 231 RRKRTNVFYIVASIFXXXXXXXXXXXXXXXQRGMKRETQVLKRI 274
            +KR+ + YI+ SI                +RG+KR +Q LKRI
Sbjct: 220 PKKRS-IVYIIFSIIVLVVLLLYYSFVYLFRRGLKRRSQDLKRI 262


>AT5G63280.1 | Symbols:  | C2H2-like zinc finger protein |
           chr5:25367085-25368848 FORWARD LENGTH=271
          Length = 271

 Score =  287 bits (734), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 130/215 (60%), Positives = 165/215 (76%)

Query: 60  QIHCSRERSRVAWKIIQEYLMPFVEKEKYHISKRCRLHPDNDIYRDQEDHKSHIDINEWQ 119
           +IHCSRERSR AW+IIQ+YL PFVE+E+Y I K CRLHPDND+YRDQE HK H+D+ EW+
Sbjct: 47  EIHCSRERSRAAWQIIQDYLTPFVERERYEIPKNCRLHPDNDLYRDQEHHKVHVDVFEWK 106

Query: 120 CGFCKKSFYEEKHLDQHFDNRHSNLLNSSESRCLADVCGALHCDLEINSGSKKSKCNPAA 179
           CG+CKKSF +EK LD+HF  RH NLLN+++++CLAD+CGALHCD  ++S   KSKCNP A
Sbjct: 107 CGYCKKSFNDEKFLDKHFSTRHYNLLNTTDTKCLADLCGALHCDFVLSSKKPKSKCNPPA 166

Query: 180 AARNKHLCESLADSCFPVNEGPAASRLHEFFLHQFCDAHSCTPSGKPFSRGRRKRTNVFY 239
            A+N+HLCES+A+SCFPV++GP+ASRLHE FL QFCDAH+CT + KPF RG +K++ VFY
Sbjct: 167 VAKNRHLCESVANSCFPVSQGPSASRLHEHFLRQFCDAHTCTGNDKPFPRGGKKKSGVFY 226

Query: 240 IVASIFXXXXXXXXXXXXXXXQRGMKRETQVLKRI 274
           +  SI                QR  +  TQ L+RI
Sbjct: 227 LAISILTLMLLPLFYLLVFLHQREKRSGTQDLRRI 261