Miyakogusa Predicted Gene

Lj6g3v0855550.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0855550.1 Non Chatacterized Hit- tr|K4B9W3|K4B9W3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,36.59,3e-19,seg,NULL; Stig1,Stigma-specific protein
Stig1,CUFF.58395.1
         (168 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G50720.1 | Symbols:  | Stigma-specific Stig1 family protein |...    94   4e-20
AT5G55110.1 | Symbols:  | Stigma-specific Stig1 family protein |...    77   6e-15
AT4G26880.1 | Symbols:  | Stigma-specific Stig1 family protein |...    70   5e-13
AT1G11925.1 | Symbols:  | Stigma-specific Stig1 family protein |...    54   4e-08
AT1G50650.1 | Symbols:  | Stigma-specific Stig1 family protein |...    48   3e-06

>AT1G50720.1 | Symbols:  | Stigma-specific Stig1 family protein |
           chr1:18789180-18789644 REVERSE LENGTH=154
          Length = 154

 Score = 94.0 bits (232), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 14/168 (8%)

Query: 1   MGFLKAIFVITITMALSIAALVTMKNITTTKEESAKPFLPSDSQPLMAHEKNTLLPSKRV 60
           MG    +  I +T++++I  L+    ++  K E+    L + +Q        TL+ + RV
Sbjct: 1   MGHRNTVLTILLTISIAIMVLIATVFVSNNKTET---LLQTHTQT------QTLITTGRV 51

Query: 61  SRFLAQKPAYPYPYPDASNYPVVHCQKDNEIXXXXXXXXXXXXXXXXXXMDVSYDKHNCG 120
           SRFLAQ          A      HC K+ EI                  +D++YD  NCG
Sbjct: 52  SRFLAQNAKNGRNLNAAD-----HCNKEEEICKSQGMYNSTMACCSNKCVDLAYDNDNCG 106

Query: 121 AXXXXXXXXXXXXRGQCVDINFDKRHCGGCNNRCETGQYCTYGMCGYA 168
           A            RG+CV + +DKRHCG CN+ C  G++C YG+C YA
Sbjct: 107 ACKNQCKFTQTCCRGECVYLAYDKRHCGECNHSCLVGEFCVYGLCNYA 154


>AT5G55110.1 | Symbols:  | Stigma-specific Stig1 family protein |
           chr5:22367870-22368361 FORWARD LENGTH=163
          Length = 163

 Score = 77.0 bits (188), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 46/114 (40%), Positives = 55/114 (48%), Gaps = 5/114 (4%)

Query: 59  RVSRFLAQKPAYPYPYPDASN-YPVVHCQKDNEIXXXXXXXXXXXXXXX---XXXMDVSY 114
           R SRFLA+K       P A N     HC KDNEI                     MD+S 
Sbjct: 51  RPSRFLAEK-VDKGKEPKARNPNAADHCNKDNEICSSSDYSTGANATMACCNNKCMDLST 109

Query: 115 DKHNCGAXXXXXXXXXXXXRGQCVDINFDKRHCGGCNNRCETGQYCTYGMCGYA 168
           D  NCG             RGQCV + +DKRHCG CN+RC+ G++C YG+C YA
Sbjct: 110 DDKNCGLCKNKCKFGQTCCRGQCVYVAYDKRHCGECNHRCDLGEFCVYGLCNYA 163


>AT4G26880.1 | Symbols:  | Stigma-specific Stig1 family protein |
           chr4:13508265-13508723 REVERSE LENGTH=152
          Length = 152

 Score = 70.5 bits (171), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 58/115 (50%), Gaps = 7/115 (6%)

Query: 56  PSKRVSRFLAQKPAYPYPYPDASNYPVVHCQKDNEIXX--XXXXXXXXXXXXXXXXMDVS 113
           P+ R +R LAQK       P+A++    HC ++ EI                    +DVS
Sbjct: 43  PTIRPNRLLAQKEVGER-NPNAAD----HCNRNPEICTPYGGGGSNSTMTCCNNKCIDVS 97

Query: 114 YDKHNCGAXXXXXXXXXXXXRGQCVDINFDKRHCGGCNNRCETGQYCTYGMCGYA 168
            D +NCGA            RGQCV + +DKRHCG CN+ CE G++C YG+C YA
Sbjct: 98  SDDNNCGACKNKCKFSQTCCRGQCVYVAYDKRHCGQCNHPCELGEFCVYGLCNYA 152


>AT1G11925.1 | Symbols:  | Stigma-specific Stig1 family protein |
           chr1:4026195-4026617 REVERSE LENGTH=140
          Length = 140

 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 33/59 (55%)

Query: 110 MDVSYDKHNCGAXXXXXXXXXXXXRGQCVDINFDKRHCGGCNNRCETGQYCTYGMCGYA 168
           +D+  +K NCG              G CV+  FD+RHCGGC  +C+ G+ C YGMC YA
Sbjct: 82  VDLRTNKLNCGRCGKSCQYSEVCCNGYCVNPMFDRRHCGGCFKKCKKGRSCAYGMCSYA 140


>AT1G50650.1 | Symbols:  | Stigma-specific Stig1 family protein |
           chr1:18763773-18764297 REVERSE LENGTH=174
          Length = 174

 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 30/59 (50%)

Query: 110 MDVSYDKHNCGAXXXXXXXXXXXXRGQCVDINFDKRHCGGCNNRCETGQYCTYGMCGYA 168
           +DV  D ++C               G CVD N D  +CG C N CE+G  C +GMCGYA
Sbjct: 80  VDVLSDPNHCRFCFKSCRFALSCCDGDCVDTNTDPSNCGQCGNECESGAPCEFGMCGYA 138