Miyakogusa Predicted Gene

Lj6g3v0831440.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0831440.1 Non Chatacterized Hit- tr|J9JZ62|J9JZ62_ACYPI
Uncharacterized protein OS=Acyrthosiphon pisum PE=4
SV,30.6,0.00000000000001,G_PATCH,G-patch domain; G-patch,G-patch
domain; seg,NULL; coiled-coil,NULL; ZINC FINGER CCCH-TYPE
WI,CUFF.58390.1
         (267 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G24830.1 | Symbols:  | zinc finger (CCCH-type) family protein...   222   2e-58

>AT2G24830.1 | Symbols:  | zinc finger (CCCH-type) family protein /
           D111/G-patch domain-containing protein |
           chr2:10576993-10579154 REVERSE LENGTH=497
          Length = 497

 Score =  222 bits (566), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 130/230 (56%), Positives = 160/230 (69%), Gaps = 7/230 (3%)

Query: 40  GLGFLESTNLQKGIQTDTALFAKWENHTRGIASKMMANMGFREGMGLGVTGQGMLDPIPV 99
           G+GFLESTNL +G+QTDTALFAKWENHTRGIASKMMA+MG+REGMGLGV+GQG+L+PI V
Sbjct: 273 GIGFLESTNLPRGVQTDTALFAKWENHTRGIASKMMASMGYREGMGLGVSGQGILNPILV 332

Query: 100 KVLPPKQSLDHALDS-RXXXXXXXXXXXXXXXXXXXXXXXXFAEANRTAKEEEESAPDVF 158
           KVLP K+SLD+AL+  R                        FAEA + AK+EEES PD+F
Sbjct: 333 KVLPAKRSLDYALEHIRNGECKSEKQKKKRSRGGKRKRGKKFAEAAKAAKQEEESKPDLF 392

Query: 159 TLINNQL-AMHGEASNGGSMKKQQSKDSGEVKKVDRKVLVAYEDEVKGLKMRVAKLEQMV 217
           +LIN Q+     E  +  S+K +Q+K       VDRK LV Y+DEV+ LK+ + KLEQMV
Sbjct: 393 SLINEQIFPTRHEKVHSESVKNRQNKGP-----VDRKALVEYQDEVRDLKLEMLKLEQMV 447

Query: 218 NANKKEKAVYEAAMRKLVETRKALAEAESVHASASNTVVGKEKEKRWLKF 267
           N NKK+  V EAA R+L E RKALA   +  A+ASN +V KE EK+WLKF
Sbjct: 448 NRNKKDLVVSEAATRRLKEVRKALASTLACQAAASNAIVSKENEKKWLKF 497