Miyakogusa Predicted Gene

Lj6g3v0820190.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0820190.1 tr|I1N0J3|I1N0J3_SOYBN GrpE protein homolog
OS=Glycine max GN=Gma.3177 PE=3 SV=1,74.06,0,seg,NULL; no
description,GrpE nucleotide exchange factor, coiled-coil; no
description,GrpE nucleotid,CUFF.58367.1
         (284 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G55200.1 | Symbols:  | Co-chaperone GrpE family protein | chr...   290   6e-79
AT4G26780.1 | Symbols: AR192 | Co-chaperone GrpE family protein ...   286   8e-78
AT5G17710.2 | Symbols: EMB1241 | Co-chaperone GrpE family protei...    56   4e-08
AT5G17710.1 | Symbols: EMB1241 | Co-chaperone GrpE family protei...    55   4e-08
AT1G36390.2 | Symbols:  | Co-chaperone GrpE family protein | chr...    48   1e-05
AT1G36390.1 | Symbols:  | Co-chaperone GrpE family protein | chr...    48   1e-05

>AT5G55200.1 | Symbols:  | Co-chaperone GrpE family protein |
           chr5:22394705-22396335 FORWARD LENGTH=302
          Length = 302

 Score =  290 bits (743), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 162/291 (55%), Positives = 204/291 (70%), Gaps = 14/291 (4%)

Query: 3   RVLSRASRSFMLLSASHKXXXXXXXX---XXXXXXXIVHQSPNKLIPLQVNLLNR-SMNS 58
           RVLSR SRS  L S+                     +VH +PNKL+ + V+L N  +++ 
Sbjct: 5   RVLSRVSRSAGLRSSFSSVVTPKRNQIPIVASRFHSLVHGTPNKLVAVPVSLRNHGTLDL 64

Query: 59  SLTPIFGFSSSASPEP---ESQNEQDKAA-----ADQTKEPDAEPESECDNLSRDDLIKL 110
           ++   FGF SS+S EP   ES  E  K        +  K  DAE   + D+LSRDDL+KL
Sbjct: 65  NVLQRFGFFSSSSAEPKGNESNTEVPKTGETSENVEVGKATDAE--IDFDDLSRDDLVKL 122

Query: 111 VAEKEELLKSKQEDIVEMKDKVMRSYAEMENVLSRTRRDAENSKKFAIQNFAKGLLDVAD 170
           V+EKE+LLK +Q+DI+EMKDK +R+YAE +N++ RT R+AE++KKFA+QNFA  LLDVAD
Sbjct: 123 VSEKEDLLKVQQKDIMEMKDKFLRTYAEQQNLMDRTNRNAESAKKFAVQNFATSLLDVAD 182

Query: 171 NLGRASSVVKDSFSKIESPNDSVEAAKLLKTLLEGVEMTEKQLAEVLKKHGVEKYDPTNE 230
           NL RASSVVK+SFSKI++  D   A  LLK LLEGVEMTEKQLAEV +K G+ K DP NE
Sbjct: 183 NLERASSVVKESFSKIDTSKDLAGATPLLKNLLEGVEMTEKQLAEVFRKAGLVKEDPLNE 242

Query: 231 PFDPNRHNAIFQIPDASKPPGTVGVVLKAGYMLYDRVLRPAEVGVTQEVED 281
           PF+PNRHNA+FQ+PDASKP GT+  VLK+GY LYDRV+RPAEVGVT  VE+
Sbjct: 243 PFNPNRHNAVFQVPDASKPKGTIAHVLKSGYSLYDRVIRPAEVGVTCAVEN 293


>AT4G26780.1 | Symbols: AR192 | Co-chaperone GrpE family protein |
           chr4:13485066-13486560 REVERSE LENGTH=327
          Length = 327

 Score =  286 bits (733), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 169/320 (52%), Positives = 210/320 (65%), Gaps = 43/320 (13%)

Query: 1   MLRVLSRASRSFML---LSASHKXXXXXXXXXXXXXXXIVHQSPNKLIPLQVNLLNRSMN 57
           +LR+LSR +R+  +   LSA                  + H   +KL+P Q+++    M+
Sbjct: 3   VLRILSRVTRNAGIRSSLSAVTLPARNQTPVFSSRFHSLAHDFSHKLVPAQMSM----MD 58

Query: 58  SSLTPIFGFSSSASPEPESQNEQDKAAADQTKEPDAEP-----ESECDN----------- 101
           S     F FSSS SPE + +    +A+    ++P AE      +SE  +           
Sbjct: 59  SFALQRFNFSSSTSPESDEKKTHTEASKTSEEKPTAEANQPGLDSESKDSVTDSAKRKRK 118

Query: 102 --------------------LSRDDLIKLVAEKEELLKSKQEDIVEMKDKVMRSYAEMEN 141
                               LS DDL+KLVAEKEELL  K+E+I ++KDKV+R+YAEMEN
Sbjct: 119 GAKGAASSSSESDSESDDDELSADDLVKLVAEKEELLSEKEEEIKQLKDKVLRTYAEMEN 178

Query: 142 VLSRTRRDAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSFSKIESPNDSVEAAKLLKT 201
           V+ RTRRDAEN+KK+A+QNFAK LLDVADNLGRASSVVK+SFSK+++  DS  AA LLKT
Sbjct: 179 VMDRTRRDAENTKKYAVQNFAKSLLDVADNLGRASSVVKESFSKLDTSEDSAGAAPLLKT 238

Query: 202 LLEGVEMTEKQLAEVLKKHGVEKYDPTNEPFDPNRHNAIFQIPDASKPPGTVGVVLKAGY 261
           LLEGVEMTEKQLAEV KK G+EKYDP NEPFDPNRHNA+FQ+PDASKP GTV  VLK+GY
Sbjct: 239 LLEGVEMTEKQLAEVFKKFGMEKYDPINEPFDPNRHNAVFQVPDASKPEGTVAHVLKSGY 298

Query: 262 MLYDRVLRPAEVGVTQEVED 281
            LYDRV+RPAEVGVTQ  E+
Sbjct: 299 TLYDRVIRPAEVGVTQGGEN 318


>AT5G17710.2 | Symbols: EMB1241 | Co-chaperone GrpE family protein |
           chr5:5839560-5841639 REVERSE LENGTH=326
          Length = 326

 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 13/148 (8%)

Query: 129 KDKVMRSYAEMENVLSRTRRDAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSFSKIES 188
           +D+++R  A+ +N   RT R+  N    A     + LL V DN  RA S +K      E 
Sbjct: 163 RDRLIRISADFDNFRKRTERERLNLVSNAQGEVVENLLAVLDNFERAKSQIKVETEGEEK 222

Query: 189 PNDSVEAAKLLKTLLEGVEMTEKQLAEVLKKHGVEKYDPTNEPFDPNRHNAIFQIPDASK 248
             +S ++               KQ  E+L   GV   +   + FDP  H AI +   A  
Sbjct: 223 VTNSYQS-------------IYKQFVEILGSLGVIHVETVGKQFDPMLHEAIMREDSAEY 269

Query: 249 PPGTVGVVLKAGYMLYDRVLRPAEVGVT 276
             G V    + G++L +R+LRP+ V V+
Sbjct: 270 EEGIVLEEYRKGFLLGERLLRPSMVKVS 297


>AT5G17710.1 | Symbols: EMB1241 | Co-chaperone GrpE family protein |
           chr5:5839560-5841639 REVERSE LENGTH=324
          Length = 324

 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 13/148 (8%)

Query: 129 KDKVMRSYAEMENVLSRTRRDAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSFSKIES 188
           +D+++R  A+ +N   RT R+  N    A     + LL V DN  RA S +K      E 
Sbjct: 161 RDRLIRISADFDNFRKRTERERLNLVSNAQGEVVENLLAVLDNFERAKSQIKVETEGEEK 220

Query: 189 PNDSVEAAKLLKTLLEGVEMTEKQLAEVLKKHGVEKYDPTNEPFDPNRHNAIFQIPDASK 248
             +S ++               KQ  E+L   GV   +   + FDP  H AI +   A  
Sbjct: 221 VTNSYQS-------------IYKQFVEILGSLGVIHVETVGKQFDPMLHEAIMREDSAEY 267

Query: 249 PPGTVGVVLKAGYMLYDRVLRPAEVGVT 276
             G V    + G++L +R+LRP+ V V+
Sbjct: 268 EEGIVLEEYRKGFLLGERLLRPSMVKVS 295


>AT1G36390.2 | Symbols:  | Co-chaperone GrpE family protein |
           chr1:13701811-13703524 REVERSE LENGTH=279
          Length = 279

 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 16/150 (10%)

Query: 127 EMKDKVMRSYAEMENVLSRTRRDAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSFSKI 186
           EMK ++   +      L + R   E++ K  I    K LL + D+  +A   V+    K 
Sbjct: 127 EMKIRLQADFDNTRKKLDKDRLSTESNAKVQI---LKSLLPIIDSFEKAKLQVRVDTDK- 182

Query: 187 ESPNDSVEAAKLLKTLLEGVEMTEKQLAEVLKKHGVEKYDPTNEPFDPNRHNAIFQIPDA 246
                     K + T  +G+    +Q  EVL+   V       +PFDP  H AI +    
Sbjct: 183 ---------EKKIDTSYQGIY---RQFVEVLRYLRVSVIATVGKPFDPLLHEAISREESE 230

Query: 247 SKPPGTVGVVLKAGYMLYDRVLRPAEVGVT 276
           +   G +   L  G++L DRVLRPA+V V+
Sbjct: 231 AVKAGIITEELNKGFVLGDRVLRPAKVKVS 260


>AT1G36390.1 | Symbols:  | Co-chaperone GrpE family protein |
           chr1:13701811-13703524 REVERSE LENGTH=279
          Length = 279

 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 16/150 (10%)

Query: 127 EMKDKVMRSYAEMENVLSRTRRDAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSFSKI 186
           EMK ++   +      L + R   E++ K  I    K LL + D+  +A   V+    K 
Sbjct: 127 EMKIRLQADFDNTRKKLDKDRLSTESNAKVQI---LKSLLPIIDSFEKAKLQVRVDTDK- 182

Query: 187 ESPNDSVEAAKLLKTLLEGVEMTEKQLAEVLKKHGVEKYDPTNEPFDPNRHNAIFQIPDA 246
                     K + T  +G+    +Q  EVL+   V       +PFDP  H AI +    
Sbjct: 183 ---------EKKIDTSYQGIY---RQFVEVLRYLRVSVIATVGKPFDPLLHEAISREESE 230

Query: 247 SKPPGTVGVVLKAGYMLYDRVLRPAEVGVT 276
           +   G +   L  G++L DRVLRPA+V V+
Sbjct: 231 AVKAGIITEELNKGFVLGDRVLRPAKVKVS 260