Miyakogusa Predicted Gene
- Lj6g3v0818990.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0818990.1 Non Chatacterized Hit- tr|E9C6K9|E9C6K9_CAPO3
Putative uncharacterized protein OS=Capsaspora
owczarz,31.46,2e-18,T_SNARE,Target SNARE coiled-coil domain; Helical
region found in SNAREs,Target SNARE coiled-coil dom,CUFF.58364.1
(229 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G16240.2 | Symbols: SYP51, ATSYP51 | syntaxin of plants 51 | ... 313 4e-86
AT1G16240.1 | Symbols: SYP51, ATSYP51 | syntaxin of plants 51 | ... 313 4e-86
AT1G79590.2 | Symbols: SYP52, ATSYP52 | syntaxin of plants 52 | ... 311 2e-85
AT1G79590.1 | Symbols: SYP52, ATSYP52 | syntaxin of plants 52 | ... 311 2e-85
AT1G16240.3 | Symbols: SYP51, ATSYP51 | syntaxin of plants 51 | ... 280 5e-76
AT1G16230.1 | Symbols: | Target SNARE coiled-coil domain protei... 204 5e-53
AT1G16225.1 | Symbols: | Target SNARE coiled-coil domain protei... 137 4e-33
AT1G28490.1 | Symbols: SYP61, ATSYP61, OSM1 | syntaxin of plants... 51 6e-07
AT1G28490.2 | Symbols: SYP61, ATSYP61, OSM1 | syntaxin of plants... 50 9e-07
>AT1G16240.2 | Symbols: SYP51, ATSYP51 | syntaxin of plants 51 |
chr1:5555183-5556340 REVERSE LENGTH=232
Length = 232
Score = 313 bits (803), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 153/211 (72%), Positives = 180/211 (85%), Gaps = 3/211 (1%)
Query: 1 MASSSDTWMKEYNEAMKLADDINSMISERSSFPASGPETQRHASAIRRKITILGTRLDSL 60
MASSSD+WM+ YNEA+KL+++IN MISERSS +GP+ QR ASAIRRKITI G +LDSL
Sbjct: 1 MASSSDSWMRAYNEALKLSEEINGMISERSSSAVTGPDAQRRASAIRRKITIFGNKLDSL 60
Query: 61 QSLLSKLPVK--SEKEMNRRKDTLANLRSKVNQMASTLNMSNFANRDSLLGPEIKPD-AM 117
QSLL+++ K SEKEMNRRKD + NLRSK NQMA+ LNMSNFANRDSLLGP+IKPD +M
Sbjct: 61 QSLLAEIHGKPISEKEMNRRKDMVGNLRSKANQMANALNMSNFANRDSLLGPDIKPDDSM 120
Query: 118 SRTVGLDNSGLVGLQRQIMKEQDDGLEKLEETVISTKHIALAVNEELTLHTRLIDDLDEH 177
SR G+DN G+VG QRQ+M+EQD+GLE+LE TV+STKHIALAV+EEL L TRLIDDLD H
Sbjct: 121 SRVTGMDNQGIVGYQRQVMREQDEGLEQLEGTVMSTKHIALAVSEELDLQTRLIDDLDYH 180
Query: 178 VDVTDSRLRRVQKHLAVLNKRTKGGCSCLCM 208
VDVTDSRLRRVQK LAV+NK + GCSC+ M
Sbjct: 181 VDVTDSRLRRVQKSLAVMNKNMRSGCSCMSM 211
>AT1G16240.1 | Symbols: SYP51, ATSYP51 | syntaxin of plants 51 |
chr1:5555183-5556340 REVERSE LENGTH=232
Length = 232
Score = 313 bits (803), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 153/211 (72%), Positives = 180/211 (85%), Gaps = 3/211 (1%)
Query: 1 MASSSDTWMKEYNEAMKLADDINSMISERSSFPASGPETQRHASAIRRKITILGTRLDSL 60
MASSSD+WM+ YNEA+KL+++IN MISERSS +GP+ QR ASAIRRKITI G +LDSL
Sbjct: 1 MASSSDSWMRAYNEALKLSEEINGMISERSSSAVTGPDAQRRASAIRRKITIFGNKLDSL 60
Query: 61 QSLLSKLPVK--SEKEMNRRKDTLANLRSKVNQMASTLNMSNFANRDSLLGPEIKPD-AM 117
QSLL+++ K SEKEMNRRKD + NLRSK NQMA+ LNMSNFANRDSLLGP+IKPD +M
Sbjct: 61 QSLLAEIHGKPISEKEMNRRKDMVGNLRSKANQMANALNMSNFANRDSLLGPDIKPDDSM 120
Query: 118 SRTVGLDNSGLVGLQRQIMKEQDDGLEKLEETVISTKHIALAVNEELTLHTRLIDDLDEH 177
SR G+DN G+VG QRQ+M+EQD+GLE+LE TV+STKHIALAV+EEL L TRLIDDLD H
Sbjct: 121 SRVTGMDNQGIVGYQRQVMREQDEGLEQLEGTVMSTKHIALAVSEELDLQTRLIDDLDYH 180
Query: 178 VDVTDSRLRRVQKHLAVLNKRTKGGCSCLCM 208
VDVTDSRLRRVQK LAV+NK + GCSC+ M
Sbjct: 181 VDVTDSRLRRVQKSLAVMNKNMRSGCSCMSM 211
>AT1G79590.2 | Symbols: SYP52, ATSYP52 | syntaxin of plants 52 |
chr1:29947064-29948304 FORWARD LENGTH=233
Length = 233
Score = 311 bits (798), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 154/212 (72%), Positives = 180/212 (84%), Gaps = 4/212 (1%)
Query: 1 MASSSDTWMKEYNEAMKLADDINSMISERSSFPASGPETQRHASAIRRKITILGTRLDSL 60
MASSSD WM+EYNEA+KL++DIN M+SER++ +GP+ QR ASAIRRKITILGTRLDSL
Sbjct: 1 MASSSDPWMREYNEALKLSEDINGMMSERNASGLTGPDAQRRASAIRRKITILGTRLDSL 60
Query: 61 QSLLSKLPVK---SEKEMNRRKDTLANLRSKVNQMASTLNMSNFANRDSLLGPEIKPD-A 116
QSLL K+P K SEKEMNRRKD + NLRSK NQ+AS LNMSNFANRDSL G ++KPD A
Sbjct: 61 QSLLVKVPGKQHVSEKEMNRRKDMVGNLRSKTNQVASALNMSNFANRDSLFGTDLKPDDA 120
Query: 117 MSRTVGLDNSGLVGLQRQIMKEQDDGLEKLEETVISTKHIALAVNEELTLHTRLIDDLDE 176
++R G+DN G+V QRQ+M+EQD+GLEKLEETV+STKHIALAVNEELTL TRLIDDLD
Sbjct: 121 INRVSGMDNQGIVVFQRQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLIDDLDY 180
Query: 177 HVDVTDSRLRRVQKHLAVLNKRTKGGCSCLCM 208
VD+TDSRLRRVQK LA++NK K GCSC+ M
Sbjct: 181 DVDITDSRLRRVQKSLALMNKSMKSGCSCMSM 212
>AT1G79590.1 | Symbols: SYP52, ATSYP52 | syntaxin of plants 52 |
chr1:29947064-29948304 FORWARD LENGTH=233
Length = 233
Score = 311 bits (798), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 154/212 (72%), Positives = 180/212 (84%), Gaps = 4/212 (1%)
Query: 1 MASSSDTWMKEYNEAMKLADDINSMISERSSFPASGPETQRHASAIRRKITILGTRLDSL 60
MASSSD WM+EYNEA+KL++DIN M+SER++ +GP+ QR ASAIRRKITILGTRLDSL
Sbjct: 1 MASSSDPWMREYNEALKLSEDINGMMSERNASGLTGPDAQRRASAIRRKITILGTRLDSL 60
Query: 61 QSLLSKLPVK---SEKEMNRRKDTLANLRSKVNQMASTLNMSNFANRDSLLGPEIKPD-A 116
QSLL K+P K SEKEMNRRKD + NLRSK NQ+AS LNMSNFANRDSL G ++KPD A
Sbjct: 61 QSLLVKVPGKQHVSEKEMNRRKDMVGNLRSKTNQVASALNMSNFANRDSLFGTDLKPDDA 120
Query: 117 MSRTVGLDNSGLVGLQRQIMKEQDDGLEKLEETVISTKHIALAVNEELTLHTRLIDDLDE 176
++R G+DN G+V QRQ+M+EQD+GLEKLEETV+STKHIALAVNEELTL TRLIDDLD
Sbjct: 121 INRVSGMDNQGIVVFQRQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLIDDLDY 180
Query: 177 HVDVTDSRLRRVQKHLAVLNKRTKGGCSCLCM 208
VD+TDSRLRRVQK LA++NK K GCSC+ M
Sbjct: 181 DVDITDSRLRRVQKSLALMNKSMKSGCSCMSM 212
>AT1G16240.3 | Symbols: SYP51, ATSYP51 | syntaxin of plants 51 |
chr1:5555193-5556340 REVERSE LENGTH=228
Length = 228
Score = 280 bits (716), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 139/193 (72%), Positives = 165/193 (85%), Gaps = 3/193 (1%)
Query: 1 MASSSDTWMKEYNEAMKLADDINSMISERSSFPASGPETQRHASAIRRKITILGTRLDSL 60
MASSSD+WM+ YNEA+KL+++IN MISERSS +GP+ QR ASAIRRKITI G +LDSL
Sbjct: 1 MASSSDSWMRAYNEALKLSEEINGMISERSSSAVTGPDAQRRASAIRRKITIFGNKLDSL 60
Query: 61 QSLLSKLPVK--SEKEMNRRKDTLANLRSKVNQMASTLNMSNFANRDSLLGPEIKPD-AM 117
QSLL+++ K SEKEMNRRKD + NLRSK NQMA+ LNMSNFANRDSLLGP+IKPD +M
Sbjct: 61 QSLLAEIHGKPISEKEMNRRKDMVGNLRSKANQMANALNMSNFANRDSLLGPDIKPDDSM 120
Query: 118 SRTVGLDNSGLVGLQRQIMKEQDDGLEKLEETVISTKHIALAVNEELTLHTRLIDDLDEH 177
SR G+DN G+VG QRQ+M+EQD+GLE+LE TV+STKHIALAV+EEL L TRLIDDLD H
Sbjct: 121 SRVTGMDNQGIVGYQRQVMREQDEGLEQLEGTVMSTKHIALAVSEELDLQTRLIDDLDYH 180
Query: 178 VDVTDSRLRRVQK 190
VDVTDSRLR ++
Sbjct: 181 VDVTDSRLRSAEE 193
>AT1G16230.1 | Symbols: | Target SNARE coiled-coil domain protein |
chr1:5553467-5554324 REVERSE LENGTH=193
Length = 193
Score = 204 bits (518), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 107/191 (56%), Positives = 138/191 (72%), Gaps = 3/191 (1%)
Query: 1 MASSSDTWMKEYNEAMKLADDINSMISERSSFPASGPETQRHASAIRRKITILGTRLDSL 60
MAS D+W++E NE +KL+++I+ MI ERSS + RHAS++RRKITIL TR+ +L
Sbjct: 1 MASLCDSWIREQNETLKLSEEIDGMILERSSLAETSSYALRHASSMRRKITILATRVQTL 60
Query: 61 QSLLSKLPVKS--EKEMNRRKDTLANLRSKVNQMASTLNMSNFANRDSLLGPEIKPDAMS 118
+ LL++ KS KEM+RRK T NLRSK NQMAS L+M F+N D LL PE K D MS
Sbjct: 61 KYLLAESQGKSISGKEMSRRKGTFENLRSKANQMASALDMLKFSNIDILLRPE-KDDIMS 119
Query: 119 RTVGLDNSGLVGLQRQIMKEQDDGLEKLEETVISTKHIALAVNEELTLHTRLIDDLDEHV 178
R +GLDN G+VGL RQ+MKE D+ L+ LEETV+ KH AL +NE++ L TRLID LD HV
Sbjct: 120 RVIGLDNQGIVGLHRQVMKEHDEALDMLEETVMRVKHNALVMNEQIGLQTRLIDGLDHHV 179
Query: 179 DVTDSRLRRVQ 189
DV+DS +R +
Sbjct: 180 DVSDSGVRVIH 190
>AT1G16225.1 | Symbols: | Target SNARE coiled-coil domain protein |
chr1:5551041-5552028 REVERSE LENGTH=199
Length = 199
Score = 137 bits (346), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 109/170 (64%), Gaps = 5/170 (2%)
Query: 25 MISERSSFPASGPETQRHASAIRRKITILGTRLDSLQSLLSKLPVKS--EKEMNRRKDTL 82
MI ERSS + + HAS +RRKITIL + +L++LL++ KS KEM+R KD +
Sbjct: 1 MILERSSLAETSSYARGHASYMRRKITILANGVQTLKNLLAESQGKSISAKEMSRCKDMV 60
Query: 83 ANLRSKVNQMASTLNMSNFANRDSLLGPEIKPDAMSRTVGLDNSGLVGLQRQIMKEQDDG 142
+LRSK QMAS L+M F+N SLLG + D MSR + +DN +VG QR MK QD
Sbjct: 61 EDLRSKAYQMASALDMLKFSNIGSLLGQD---DIMSRVIDMDNQEIVGFQRTTMKVQDKA 117
Query: 143 LEKLEETVISTKHIALAVNEELTLHTRLIDDLDEHVDVTDSRLRRVQKHL 192
LE LE+ V+ K ALA+N EL L TRLID LD HVDV+ S + +Q+ +
Sbjct: 118 LEMLEKGVMHLKREALAMNMELGLQTRLIDRLDHHVDVSASDVEELQRSI 167
>AT1G28490.1 | Symbols: SYP61, ATSYP61, OSM1 | syntaxin of plants 61
| chr1:10016433-10017842 FORWARD LENGTH=245
Length = 245
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 81/153 (52%), Gaps = 16/153 (10%)
Query: 72 EKEMNRRKDTLANLRSKVNQMASTL---NMSNFANRDSLLGPEIK--PDA-----MSRTV 121
E E+ +R+ +N R++V + S + +S+ A S + E+ P++ +
Sbjct: 78 EAELEKRRRWTSNARTQVRNVKSGVLAGKVSSGAGHASEVRRELMRMPNSGEASRYDQYG 137
Query: 122 GLDNSGLVGLQ--RQ--IMKEQDDGLEKLEETVISTKHIALAVNEELTLHTRLIDDLDEH 177
G D+ G V + RQ ++K+QD+ L++L ++V + L +++EL R+ID+LD
Sbjct: 138 GRDDDGFVQSESDRQMLLIKQQDEELDELSKSVQRIGGVGLTIHDELVAQERIIDELDTE 197
Query: 178 VDVTDSRLRRVQKHLAVLNKR--TKGGCSCLCM 208
+D T +RL VQK + ++ K+ KG +C
Sbjct: 198 MDSTKNRLEFVQKKVGMVMKKAGAKGQMMMICF 230
>AT1G28490.2 | Symbols: SYP61, ATSYP61, OSM1 | syntaxin of plants 61
| chr1:10016634-10017842 FORWARD LENGTH=206
Length = 206
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 81/153 (52%), Gaps = 16/153 (10%)
Query: 72 EKEMNRRKDTLANLRSKVNQMASTL---NMSNFANRDSLLGPEIK--PDA-----MSRTV 121
E E+ +R+ +N R++V + S + +S+ A S + E+ P++ +
Sbjct: 39 EAELEKRRRWTSNARTQVRNVKSGVLAGKVSSGAGHASEVRRELMRMPNSGEASRYDQYG 98
Query: 122 GLDNSGLVGLQ--RQ--IMKEQDDGLEKLEETVISTKHIALAVNEELTLHTRLIDDLDEH 177
G D+ G V + RQ ++K+QD+ L++L ++V + L +++EL R+ID+LD
Sbjct: 99 GRDDDGFVQSESDRQMLLIKQQDEELDELSKSVQRIGGVGLTIHDELVAQERIIDELDTE 158
Query: 178 VDVTDSRLRRVQKHLAVLNKR--TKGGCSCLCM 208
+D T +RL VQK + ++ K+ KG +C
Sbjct: 159 MDSTKNRLEFVQKKVGMVMKKAGAKGQMMMICF 191