Miyakogusa Predicted Gene

Lj6g3v0818980.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0818980.1 Non Chatacterized Hit- tr|I1N0I6|I1N0I6_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,75.9,0,Histone-fold,Histone-fold; no description,Histone-fold;
seg,NULL; TATA box binding protein associate,CUFF.58352.1
         (544 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G04950.3 | Symbols: TAFII59, TAF6, ATTAF6 | TATA BOX ASSOCIAT...   584   e-167
AT1G04950.2 | Symbols: TAFII59, TAF6, ATTAF6 | TATA BOX ASSOCIAT...   584   e-167
AT1G04950.1 | Symbols: TAFII59, TAF6, ATTAF6 | TATA BOX ASSOCIAT...   584   e-167
AT1G54360.1 | Symbols: TAF6B1, TAF6B | TBP-ASSOCIATED FACTOR 6B ...   531   e-151
AT1G54360.3 | Symbols: TAF6B2, TAF6B | TBP-ASSOCIATED FACTOR 6B ...   521   e-148
AT1G54360.2 | Symbols: TAF6B | TBP-ASSOCIATED FACTOR 6B | chr1:2...   517   e-147
AT1G54360.5 | Symbols: TAF6B | TBP-ASSOCIATED FACTOR 6B | chr1:2...   469   e-132
AT1G54360.4 | Symbols: TAF6B4, TAF6B | TBP-ASSOCIATED FACTOR 6B ...   427   e-120

>AT1G04950.3 | Symbols: TAFII59, TAF6, ATTAF6 | TATA BOX ASSOCIATED
           FACTOR II 59 | chr1:1403606-1407184 REVERSE LENGTH=549
          Length = 549

 Score =  584 bits (1506), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 307/558 (55%), Positives = 387/558 (69%), Gaps = 23/558 (4%)

Query: 1   MSSVPKETIEVIAQSIGITNLSPDVALALAPDLEYRIREIMQESIKCMRHSRRTFLTSDD 60
           MS VPKET+EVIAQSIGITNL P+ AL LAPD+EYR+REIMQE+IKCMRHS+RT LT+ D
Sbjct: 1   MSIVPKETVEVIAQSIGITNLLPEAALMLAPDVEYRVREIMQEAIKCMRHSKRTTLTASD 60

Query: 61  VDSALALRNLEPIYGFTSNDPLRFKRAAGHKDLFYXXXXXXXXXXXXEAPLPKAPLDTSI 120
           VD AL LRN+EPIYGF S  P RF++A GH+DLFY            EAPLPKAPLDT I
Sbjct: 61  VDGALNLRNVEPIYGFASGGPFRFRKAIGHRDLFYTDDREVDFKDVIEAPLPKAPLDTEI 120

Query: 121 TSHWLAIEGVQPAIPENAPVE---ASSEMRKSEYKEDGLPVDVKLPVKHVITRELQLYYE 177
             HWLAIEGVQPAIPENAP+E   A +E +  E K DG  +DV+LPVKHV++RELQLY++
Sbjct: 121 VCHWLAIEGVQPAIPENAPLEVIRAPAETKIHEQK-DGPLIDVRLPVKHVLSRELQLYFQ 179

Query: 178 KITGLSLNKPGSIPFRRALVSLATDSGLHPLVPYLTCFVADEVARNLNNLNILFALMRLV 237
           KI  L+++K     ++ ALVSLA+DSGLHPLVPY T F+ADEV+  LN+  +LF LM +V
Sbjct: 180 KIAELAMSKSNPPLYKEALVSLASDSGLHPLVPYFTNFIADEVSNGLNDFRLLFNLMHIV 239

Query: 238 RSLLHNPHIHTELYIHQLMPPILTCVVAKRIGNRLSDDHWELRNFSANLVASICKRFGHV 297
           RSLL NPHIH E Y+HQLMP ++TC+V++++GNR +D+HWELR+F+ANLV+ ICKR+G V
Sbjct: 240 RSLLQNPHIHIEPYLHQLMPSVVTCLVSRKLGNRFADNHWELRDFAANLVSLICKRYGTV 299

Query: 298 YHNLQPRVTKTFLHSFLDPTKALTQHYGAIIGIAALGSRMVRLLILPNLEPYLHLIEPEM 357
           Y  LQ R+T+T +++ LDP KALTQHYGAI G+AALG  +VRLLIL NLEPYL L+EPE+
Sbjct: 300 YITLQSRLTRTLVNALLDPKKALTQHYGAIQGLAALGHTVVRLLILSNLEPYLSLLEPEL 359

Query: 358 QLEKQKNEIKRHEAWQVYGALLCAVGQCMHEKAKIFSSLLSPPTRVTSRGNGKALISMPI 417
             EKQKN++K +EAW+VYGALL A G C+H + KIF  L SP      +G GK  I +  
Sbjct: 360 NAEKQKNQMKIYEAWRVYGALLRAAGLCIHGRLKIFPPLPSPSPSFLHKGKGKGKI-IST 418

Query: 418 NVGKRKASTDNLMQQQQPPLKKIATDGPGGVIAMNS-----MSVDNMQGSTGGYXXXXXX 472
           +  KRK S D+  + Q P  + I  DGP GV + +      M VDN              
Sbjct: 419 DPHKRKLSVDS-SENQSPQKRLITMDGPDGVHSQDQSGSAPMQVDN------PVENDNPP 471

Query: 473 XXXXXXXXXRQLSNDHHMPGREVAGQQSKAS------AILAQAWKDDIDAGQLLSSVVEL 526
                     Q S+ +    R    ++S  S      AIL Q WKDD+D+G+LL  + EL
Sbjct: 472 QNSVQPSSSEQASDANESESRNGKVKESGRSRAITMKAILDQIWKDDLDSGRLLVKLHEL 531

Query: 527 FGERVLSFIPKPEACIFL 544
           +G+R+L FIP  E  +FL
Sbjct: 532 YGDRILPFIPSTEMSVFL 549


>AT1G04950.2 | Symbols: TAFII59, TAF6, ATTAF6 | TATA BOX ASSOCIATED
           FACTOR II 59 | chr1:1403606-1407184 REVERSE LENGTH=549
          Length = 549

 Score =  584 bits (1506), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 307/558 (55%), Positives = 387/558 (69%), Gaps = 23/558 (4%)

Query: 1   MSSVPKETIEVIAQSIGITNLSPDVALALAPDLEYRIREIMQESIKCMRHSRRTFLTSDD 60
           MS VPKET+EVIAQSIGITNL P+ AL LAPD+EYR+REIMQE+IKCMRHS+RT LT+ D
Sbjct: 1   MSIVPKETVEVIAQSIGITNLLPEAALMLAPDVEYRVREIMQEAIKCMRHSKRTTLTASD 60

Query: 61  VDSALALRNLEPIYGFTSNDPLRFKRAAGHKDLFYXXXXXXXXXXXXEAPLPKAPLDTSI 120
           VD AL LRN+EPIYGF S  P RF++A GH+DLFY            EAPLPKAPLDT I
Sbjct: 61  VDGALNLRNVEPIYGFASGGPFRFRKAIGHRDLFYTDDREVDFKDVIEAPLPKAPLDTEI 120

Query: 121 TSHWLAIEGVQPAIPENAPVE---ASSEMRKSEYKEDGLPVDVKLPVKHVITRELQLYYE 177
             HWLAIEGVQPAIPENAP+E   A +E +  E K DG  +DV+LPVKHV++RELQLY++
Sbjct: 121 VCHWLAIEGVQPAIPENAPLEVIRAPAETKIHEQK-DGPLIDVRLPVKHVLSRELQLYFQ 179

Query: 178 KITGLSLNKPGSIPFRRALVSLATDSGLHPLVPYLTCFVADEVARNLNNLNILFALMRLV 237
           KI  L+++K     ++ ALVSLA+DSGLHPLVPY T F+ADEV+  LN+  +LF LM +V
Sbjct: 180 KIAELAMSKSNPPLYKEALVSLASDSGLHPLVPYFTNFIADEVSNGLNDFRLLFNLMHIV 239

Query: 238 RSLLHNPHIHTELYIHQLMPPILTCVVAKRIGNRLSDDHWELRNFSANLVASICKRFGHV 297
           RSLL NPHIH E Y+HQLMP ++TC+V++++GNR +D+HWELR+F+ANLV+ ICKR+G V
Sbjct: 240 RSLLQNPHIHIEPYLHQLMPSVVTCLVSRKLGNRFADNHWELRDFAANLVSLICKRYGTV 299

Query: 298 YHNLQPRVTKTFLHSFLDPTKALTQHYGAIIGIAALGSRMVRLLILPNLEPYLHLIEPEM 357
           Y  LQ R+T+T +++ LDP KALTQHYGAI G+AALG  +VRLLIL NLEPYL L+EPE+
Sbjct: 300 YITLQSRLTRTLVNALLDPKKALTQHYGAIQGLAALGHTVVRLLILSNLEPYLSLLEPEL 359

Query: 358 QLEKQKNEIKRHEAWQVYGALLCAVGQCMHEKAKIFSSLLSPPTRVTSRGNGKALISMPI 417
             EKQKN++K +EAW+VYGALL A G C+H + KIF  L SP      +G GK  I +  
Sbjct: 360 NAEKQKNQMKIYEAWRVYGALLRAAGLCIHGRLKIFPPLPSPSPSFLHKGKGKGKI-IST 418

Query: 418 NVGKRKASTDNLMQQQQPPLKKIATDGPGGVIAMNS-----MSVDNMQGSTGGYXXXXXX 472
           +  KRK S D+  + Q P  + I  DGP GV + +      M VDN              
Sbjct: 419 DPHKRKLSVDS-SENQSPQKRLITMDGPDGVHSQDQSGSAPMQVDN------PVENDNPP 471

Query: 473 XXXXXXXXXRQLSNDHHMPGREVAGQQSKAS------AILAQAWKDDIDAGQLLSSVVEL 526
                     Q S+ +    R    ++S  S      AIL Q WKDD+D+G+LL  + EL
Sbjct: 472 QNSVQPSSSEQASDANESESRNGKVKESGRSRAITMKAILDQIWKDDLDSGRLLVKLHEL 531

Query: 527 FGERVLSFIPKPEACIFL 544
           +G+R+L FIP  E  +FL
Sbjct: 532 YGDRILPFIPSTEMSVFL 549


>AT1G04950.1 | Symbols: TAFII59, TAF6, ATTAF6 | TATA BOX ASSOCIATED
           FACTOR II 59 | chr1:1403606-1407184 REVERSE LENGTH=549
          Length = 549

 Score =  584 bits (1506), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 307/558 (55%), Positives = 387/558 (69%), Gaps = 23/558 (4%)

Query: 1   MSSVPKETIEVIAQSIGITNLSPDVALALAPDLEYRIREIMQESIKCMRHSRRTFLTSDD 60
           MS VPKET+EVIAQSIGITNL P+ AL LAPD+EYR+REIMQE+IKCMRHS+RT LT+ D
Sbjct: 1   MSIVPKETVEVIAQSIGITNLLPEAALMLAPDVEYRVREIMQEAIKCMRHSKRTTLTASD 60

Query: 61  VDSALALRNLEPIYGFTSNDPLRFKRAAGHKDLFYXXXXXXXXXXXXEAPLPKAPLDTSI 120
           VD AL LRN+EPIYGF S  P RF++A GH+DLFY            EAPLPKAPLDT I
Sbjct: 61  VDGALNLRNVEPIYGFASGGPFRFRKAIGHRDLFYTDDREVDFKDVIEAPLPKAPLDTEI 120

Query: 121 TSHWLAIEGVQPAIPENAPVE---ASSEMRKSEYKEDGLPVDVKLPVKHVITRELQLYYE 177
             HWLAIEGVQPAIPENAP+E   A +E +  E K DG  +DV+LPVKHV++RELQLY++
Sbjct: 121 VCHWLAIEGVQPAIPENAPLEVIRAPAETKIHEQK-DGPLIDVRLPVKHVLSRELQLYFQ 179

Query: 178 KITGLSLNKPGSIPFRRALVSLATDSGLHPLVPYLTCFVADEVARNLNNLNILFALMRLV 237
           KI  L+++K     ++ ALVSLA+DSGLHPLVPY T F+ADEV+  LN+  +LF LM +V
Sbjct: 180 KIAELAMSKSNPPLYKEALVSLASDSGLHPLVPYFTNFIADEVSNGLNDFRLLFNLMHIV 239

Query: 238 RSLLHNPHIHTELYIHQLMPPILTCVVAKRIGNRLSDDHWELRNFSANLVASICKRFGHV 297
           RSLL NPHIH E Y+HQLMP ++TC+V++++GNR +D+HWELR+F+ANLV+ ICKR+G V
Sbjct: 240 RSLLQNPHIHIEPYLHQLMPSVVTCLVSRKLGNRFADNHWELRDFAANLVSLICKRYGTV 299

Query: 298 YHNLQPRVTKTFLHSFLDPTKALTQHYGAIIGIAALGSRMVRLLILPNLEPYLHLIEPEM 357
           Y  LQ R+T+T +++ LDP KALTQHYGAI G+AALG  +VRLLIL NLEPYL L+EPE+
Sbjct: 300 YITLQSRLTRTLVNALLDPKKALTQHYGAIQGLAALGHTVVRLLILSNLEPYLSLLEPEL 359

Query: 358 QLEKQKNEIKRHEAWQVYGALLCAVGQCMHEKAKIFSSLLSPPTRVTSRGNGKALISMPI 417
             EKQKN++K +EAW+VYGALL A G C+H + KIF  L SP      +G GK  I +  
Sbjct: 360 NAEKQKNQMKIYEAWRVYGALLRAAGLCIHGRLKIFPPLPSPSPSFLHKGKGKGKI-IST 418

Query: 418 NVGKRKASTDNLMQQQQPPLKKIATDGPGGVIAMNS-----MSVDNMQGSTGGYXXXXXX 472
           +  KRK S D+  + Q P  + I  DGP GV + +      M VDN              
Sbjct: 419 DPHKRKLSVDS-SENQSPQKRLITMDGPDGVHSQDQSGSAPMQVDN------PVENDNPP 471

Query: 473 XXXXXXXXXRQLSNDHHMPGREVAGQQSKAS------AILAQAWKDDIDAGQLLSSVVEL 526
                     Q S+ +    R    ++S  S      AIL Q WKDD+D+G+LL  + EL
Sbjct: 472 QNSVQPSSSEQASDANESESRNGKVKESGRSRAITMKAILDQIWKDDLDSGRLLVKLHEL 531

Query: 527 FGERVLSFIPKPEACIFL 544
           +G+R+L FIP  E  +FL
Sbjct: 532 YGDRILPFIPSTEMSVFL 549


>AT1G54360.1 | Symbols: TAF6B1, TAF6B | TBP-ASSOCIATED FACTOR 6B |
           chr1:20290600-20293160 FORWARD LENGTH=504
          Length = 504

 Score =  531 bits (1367), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 284/541 (52%), Positives = 367/541 (67%), Gaps = 38/541 (7%)

Query: 4   VPKETIEVIAQSIGITNLSPDVALALAPDLEYRIREIMQESIKCMRHSRRTFLTSDDVDS 63
           V KE+IEVIAQSIG++ LSPDV+ ALAPD+EYR+RE+MQE+IKCMRH+RRT L + DVDS
Sbjct: 2   VTKESIEVIAQSIGLSTLSPDVSAALAPDVEYRVREVMQEAIKCMRHARRTTLMAHDVDS 61

Query: 64  ALALRNLEPIYGFTSNDPLRFKRAAGHKDLFYXXXXXXXXXXXXEAPLPKAPLDTSITSH 123
           AL  RNLEP  G  S   +RFKRA  ++DL++            EAPLP AP D S+  H
Sbjct: 62  ALHFRNLEPTSGSKS---MRFKRAPENRDLYFFDDKDVELKNVIEAPLPNAPPDASVFLH 118

Query: 124 WLAIEGVQPAIPENAPVEASSEMRKSEYKEDGLPVDVKLPVKHVITRELQLYYEKITGLS 183
           WLAI+G+QP+IP+N+P++A S++++SEYK+DGL        + V++++LQ+Y++K+T  +
Sbjct: 119 WLAIDGIQPSIPQNSPLQAISDLKRSEYKDDGLAA------RQVLSKDLQIYFDKVTEWA 172

Query: 184 LNKPGSIPFRRALVSLATDSGLHPLVPYLTCFVADEVARNLNNLNILFALMRLVRSLLHN 243
           L + GS  FR+AL SL  D GLHPLVP+ T F+A+E+ +N++N  IL ALMRL RSLLHN
Sbjct: 173 LTQSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNMDNYPILLALMRLARSLLHN 232

Query: 244 PHIHTELYIHQLMPPILTCVVAKRIGNRLSDDHWELRNFSANLVASICKRFGHVYHNLQP 303
           PH+H E Y+HQLMP I+TC++AKR+G R SD+HW+LRNF+A+ VAS CKRFGHVYHNL P
Sbjct: 233 PHVHIEPYLHQLMPSIITCLIAKRLGRRSSDNHWDLRNFTASTVASTCKRFGHVYHNLLP 292

Query: 304 RVTKTFLHSFLDPTKALTQHYGAIIGIAALGSRMVRLLILPNLEPYLHLIEPEMQLEKQK 363
           RVT++ LH+FLDPTKAL QHYGAI G+ ALG  MVR L+LPNL PYL L+ PEM LEKQK
Sbjct: 293 RVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNMVRFLVLPNLGPYLLLLLPEMGLEKQK 352

Query: 364 NEIKRHEAWQVYGALLCAVGQCMHEKAKIFSSLLSPPTRVTSRGNGKALISMPINVGKRK 423
            E KRH AW VYGAL+ A G+C++E+ K   +LLSPPT    + NGK  ++ P    KRK
Sbjct: 353 EEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLSPPTSSVWKTNGK--LTSP-RQSKRK 409

Query: 424 ASTDNLMQQQQPPLKKIATDGPGGVIAMNSMSVDNMQGSTGGYXXXXXXXXXXXXXXXRQ 483
           AS+DNL    QPPLKKIA    GG+I M+S  +  M+G+T                    
Sbjct: 410 ASSDNLT--HQPPLKKIAV---GGIIQMSSTQM-QMRGTT-----------TVPQQSHTD 452

Query: 484 LSNDHHMPGREVAGQQSKASAILAQAWKDDIDAGQLLSSVVELFGERVLSFIPKPEACIF 543
               HH     +A + S A+           D    L  + E FGE +L F P  E   F
Sbjct: 453 ADARHHNSPSTIAPKTSAAAG---------TDVDNYLFPLFEYFGESMLMFTPTHELSFF 503

Query: 544 L 544
           L
Sbjct: 504 L 504


>AT1G54360.3 | Symbols: TAF6B2, TAF6B | TBP-ASSOCIATED FACTOR 6B |
           chr1:20290600-20293160 FORWARD LENGTH=497
          Length = 497

 Score =  521 bits (1341), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 282/541 (52%), Positives = 360/541 (66%), Gaps = 45/541 (8%)

Query: 4   VPKETIEVIAQSIGITNLSPDVALALAPDLEYRIREIMQESIKCMRHSRRTFLTSDDVDS 63
           V KE+IEVIAQSIG++ LSPDV+ ALAPD+EYR+RE+MQE+IKCMRH+RRT L + DVDS
Sbjct: 2   VTKESIEVIAQSIGLSTLSPDVSAALAPDVEYRVREVMQEAIKCMRHARRTTLMAHDVDS 61

Query: 64  ALALRNLEPIYGFTSNDPLRFKRAAGHKDLFYXXXXXXXXXXXXEAPLPKAPLDTSITSH 123
           AL  RNLEP  G  S   +RFKRA  ++DL++            EAPLP AP D S+  H
Sbjct: 62  ALHFRNLEPTSGSKS---MRFKRAPENRDLYFFDDKDVELKNVIEAPLPNAPPDASVFLH 118

Query: 124 WLAIEGVQPAIPENAPVEASSEMRKSEYKEDGLPVDVKLPVKHVITRELQLYYEKITGLS 183
           WLAI+G+QP+IP+N+P++A S++++SEYK+DGL                Q+Y++K+T  +
Sbjct: 119 WLAIDGIQPSIPQNSPLQAISDLKRSEYKDDGLAAR-------------QIYFDKVTEWA 165

Query: 184 LNKPGSIPFRRALVSLATDSGLHPLVPYLTCFVADEVARNLNNLNILFALMRLVRSLLHN 243
           L + GS  FR+AL SL  D GLHPLVP+ T F+A+E+ +N++N  IL ALMRL RSLLHN
Sbjct: 166 LTQSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNMDNYPILLALMRLARSLLHN 225

Query: 244 PHIHTELYIHQLMPPILTCVVAKRIGNRLSDDHWELRNFSANLVASICKRFGHVYHNLQP 303
           PH+H E Y+HQLMP I+TC++AKR+G R SD+HW+LRNF+A+ VAS CKRFGHVYHNL P
Sbjct: 226 PHVHIEPYLHQLMPSIITCLIAKRLGRRSSDNHWDLRNFTASTVASTCKRFGHVYHNLLP 285

Query: 304 RVTKTFLHSFLDPTKALTQHYGAIIGIAALGSRMVRLLILPNLEPYLHLIEPEMQLEKQK 363
           RVT++ LH+FLDPTKAL QHYGAI G+ ALG  MVR L+LPNL PYL L+ PEM LEKQK
Sbjct: 286 RVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNMVRFLVLPNLGPYLLLLLPEMGLEKQK 345

Query: 364 NEIKRHEAWQVYGALLCAVGQCMHEKAKIFSSLLSPPTRVTSRGNGKALISMPINVGKRK 423
            E KRH AW VYGAL+ A G+C++E+ K   +LLSPPT    + NGK  ++ P    KRK
Sbjct: 346 EEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLSPPTSSVWKTNGK--LTSP-RQSKRK 402

Query: 424 ASTDNLMQQQQPPLKKIATDGPGGVIAMNSMSVDNMQGSTGGYXXXXXXXXXXXXXXXRQ 483
           AS+DNL    QPPLKKIA    GG+I M+S  +  M+G+T                    
Sbjct: 403 ASSDNL--THQPPLKKIAV---GGIIQMSSTQM-QMRGTT-----------TVPQQSHTD 445

Query: 484 LSNDHHMPGREVAGQQSKASAILAQAWKDDIDAGQLLSSVVELFGERVLSFIPKPEACIF 543
               HH     +A + S A+           D    L  + E FGE +L F P  E   F
Sbjct: 446 ADARHHNSPSTIAPKTSAAAG---------TDVDNYLFPLFEYFGESMLMFTPTHELSFF 496

Query: 544 L 544
           L
Sbjct: 497 L 497


>AT1G54360.2 | Symbols: TAF6B | TBP-ASSOCIATED FACTOR 6B |
           chr1:20290600-20293160 FORWARD LENGTH=527
          Length = 527

 Score =  517 bits (1331), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 286/568 (50%), Positives = 370/568 (65%), Gaps = 69/568 (12%)

Query: 4   VPKETIEVIAQSIGITNLSPDVALALAPDLEYRIREIMQ--------------------- 42
           V KE+IEVIAQSIG++ LSPDV+ ALAPD+EYR+RE+MQ                     
Sbjct: 2   VTKESIEVIAQSIGLSTLSPDVSAALAPDVEYRVREVMQVYHQLQLYFCPLISSLTCRRN 61

Query: 43  --ESIKCMRHSRRTFLTSDDVDSALALRNLEPIYGFTSNDPLRFKRAAGHKDLFYXXXXX 100
             E+IKCMRH+RRT L + DVDSAL  RNLEP  G  S   +RFKRA  ++DL++     
Sbjct: 62  LQEAIKCMRHARRTTLMAHDVDSALHFRNLEPTSGSKS---MRFKRAPENRDLYFFDDKD 118

Query: 101 XXXXXXXEAPLPKAPLDTSITSHWLAIEGVQPAIPENAPVEASSEMRKSEYKEDGLPVDV 160
                  EAPLP AP D S+  HWLAI+G+QP+IP+N+P++A S++++SEYK+DGL    
Sbjct: 119 VELKNVIEAPLPNAPPDASVFLHWLAIDGIQPSIPQNSPLQAISDLKRSEYKDDGLAA-- 176

Query: 161 KLPVKHVITRELQLYYEKITGLSLNKPGSIPFRRALVSLATDSGLHPLVPYLTCFVADEV 220
               + V++++LQ+Y++K+T  +L + GS  FR+AL SL  D GLHPLVP+ T F+A+E+
Sbjct: 177 ----RQVLSKDLQIYFDKVTEWALTQSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEI 232

Query: 221 ARNLNNLNILFALMRLVRSLLHNPHIHTELYIHQLMPPILTCVVAKRIGNRLSDDHWELR 280
            +N++N  IL ALMRL RSLLHNPH+H E Y+HQLMP I+TC++AKR+G R SD+HW+LR
Sbjct: 233 VKNMDNYPILLALMRLARSLLHNPHVHIEPYLHQLMPSIITCLIAKRLGRRSSDNHWDLR 292

Query: 281 NFSANLVASICKRFGHVYHNLQPRVTKTFLHSFLDPTKALTQHYGAIIGIAALGSRMVRL 340
           NF+A+ VAS CKRFGHVYHNL PRVT++ LH+FLDPTKAL QHYGAI G+ ALG  MVR 
Sbjct: 293 NFTASTVASTCKRFGHVYHNLLPRVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNMVRF 352

Query: 341 LILPNLEPYLHLIEPEMQLEKQKNEIKRHEAWQVYGALLCAVGQCMHEKAKIFSSLLSPP 400
           L+LPNL PYL L+ PEM LEKQK E KRH AW VYGAL+ A G+C++E+ K   +LLSPP
Sbjct: 353 LVLPNLGPYLLLLLPEMGLEKQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLSPP 412

Query: 401 TRVTSRGNGKALISMPINVGKRKASTDNLMQQQQPPLKKIATDGPGGVIAMNSMSVDNMQ 460
           T    + NGK  ++ P    KRKAS+DNL    QPPLKKIA    GG+I M+S  +  M+
Sbjct: 413 TSSVWKTNGK--LTSP-RQSKRKASSDNLT--HQPPLKKIAV---GGIIQMSSTQM-QMR 463

Query: 461 GSTGGYXXXXXXXXXXXXXXXRQLSND----HHMPGREVAGQQSKASAILAQAWKDDIDA 516
           G+T                  +Q   D    HH     +A + S A+           D 
Sbjct: 464 GTT---------------TVPQQSHTDADARHHNSPSTIAPKTSAAAG---------TDV 499

Query: 517 GQLLSSVVELFGERVLSFIPKPEACIFL 544
              L  + E FGE +L F P  E   FL
Sbjct: 500 DNYLFPLFEYFGESMLMFTPTHELSFFL 527


>AT1G54360.5 | Symbols: TAF6B | TBP-ASSOCIATED FACTOR 6B |
           chr1:20290600-20293160 FORWARD LENGTH=476
          Length = 476

 Score =  469 bits (1207), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 266/545 (48%), Positives = 345/545 (63%), Gaps = 74/545 (13%)

Query: 4   VPKETIEVIAQSIGITNLSPDVALALAPDLEYRIREIMQESIKCMRHSRRTFLTSDDVDS 63
           V KE+IEVIAQSIG++ LSPDV+ ALAPD+E                            S
Sbjct: 2   VTKESIEVIAQSIGLSTLSPDVSAALAPDVE----------------------------S 33

Query: 64  ALALRNLEPIYGFTSNDPLRFKRAAGHKDLFYXXXXXXXXXXXXEAPLPKAPLDTSITSH 123
           AL  RNLEP  G  S   +RFKRA  ++DL++            EAPLP AP D S+  H
Sbjct: 34  ALHFRNLEPTSGSKS---MRFKRAPENRDLYFFDDKDVELKNVIEAPLPNAPPDASVFLH 90

Query: 124 WLAIEGVQPAIPENAPVEASSEMRKSEYKEDGLPVDVKLPVKHVITRELQLYYEKITGLS 183
           WLAI+G+QP+IP+N+P++A S++++SEYK+DGL        + V++++LQ+Y++K+T  +
Sbjct: 91  WLAIDGIQPSIPQNSPLQAISDLKRSEYKDDGLAA------RQVLSKDLQIYFDKVTEWA 144

Query: 184 LNKPGSIPFRRALVSLATDSGLHPLVPYLTCFVADEVARNLNNLNILFALMRLVRSLLHN 243
           L + GS  FR+AL SL  D GLHPLVP+ T F+A+E+ +N++N  IL ALMRL RSLLHN
Sbjct: 145 LTQSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNMDNYPILLALMRLARSLLHN 204

Query: 244 PHIHTELYIHQLMPPILTCVVAKRIGNRLSDDHWELRNFSANLVASICKRFGHVYHNLQP 303
           PH+H E Y+HQLMP I+TC++AKR+G R SD+HW+LRNF+A+ VAS CKRFGHVYHNL P
Sbjct: 205 PHVHIEPYLHQLMPSIITCLIAKRLGRRSSDNHWDLRNFTASTVASTCKRFGHVYHNLLP 264

Query: 304 RVTKTFLHSFLDPTKALTQHYGAIIGIAALGSRMVRLLILPNLEPYLHLIEPEMQLEKQK 363
           RVT++ LH+FLDPTKAL QHYGAI G+ ALG  MVR L+LPNL PYL L+ PEM LEKQK
Sbjct: 265 RVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNMVRFLVLPNLGPYLLLLLPEMGLEKQK 324

Query: 364 NEIKRHEAWQVYGALLCAVGQCMHEKAKIFSSLLSPPTRVTSRGNGKALISMPINVGKRK 423
            E KRH AW VYGAL+ A G+C++E+ K   +LLSPPT    + NGK  ++ P    KRK
Sbjct: 325 EEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLSPPTSSVWKTNGK--LTSP-RQSKRK 381

Query: 424 ASTDNLMQQQQPPLKKIATDGPGGVIAMNSMSVDNMQGSTGGYXXXXXXXXXXXXXXXRQ 483
           AS+DNL    QPPLKKIA    GG+I M+S  +  M+G+T                  +Q
Sbjct: 382 ASSDNLT--HQPPLKKIAV---GGIIQMSSTQM-QMRGTT---------------TVPQQ 420

Query: 484 LSND----HHMPGREVAGQQSKASAILAQAWKDDIDAGQLLSSVVELFGERVLSFIPKPE 539
              D    HH     +A + S A+           D    L  + E FGE +L F P  E
Sbjct: 421 SHTDADARHHNSPSTIAPKTSAAAG---------TDVDNYLFPLFEYFGESMLMFTPTHE 471

Query: 540 ACIFL 544
              FL
Sbjct: 472 LSFFL 476


>AT1G54360.4 | Symbols: TAF6B4, TAF6B | TBP-ASSOCIATED FACTOR 6B |
           chr1:20290965-20293160 FORWARD LENGTH=428
          Length = 428

 Score =  427 bits (1098), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 231/463 (49%), Positives = 304/463 (65%), Gaps = 35/463 (7%)

Query: 82  LRFKRAAGHKDLFYXXXXXXXXXXXXEAPLPKAPLDTSITSHWLAIEGVQPAIPENAPVE 141
           +RFKRA  ++DL++            EAPLP AP D S+  HWLAI+G+QP+IP+N+P++
Sbjct: 1   MRFKRAPENRDLYFFDDKDVELKNVIEAPLPNAPPDASVFLHWLAIDGIQPSIPQNSPLQ 60

Query: 142 ASSEMRKSEYKEDGLPVDVKLPVKHVITRELQLYYEKITGLSLNKPGSIPFRRALVSLAT 201
           A S++++SEYK+DGL        + V++++LQ+Y++K+T  +L + GS  FR+AL SL  
Sbjct: 61  AISDLKRSEYKDDGLAA------RQVLSKDLQIYFDKVTEWALTQSGSTLFRQALASLEI 114

Query: 202 DSGLHPLVPYLTCFVADEVARNLNNLNILFALMRLVRSLLHNPHIHTELYIHQLMPPILT 261
           D GLHPLVP+ T F+A+E+ +N++N  IL ALMRL RSLLHNPH+H E Y+HQLMP I+T
Sbjct: 115 DPGLHPLVPFFTSFIAEEIVKNMDNYPILLALMRLARSLLHNPHVHIEPYLHQLMPSIIT 174

Query: 262 CVVAKRIGNRLSDDHWELRNFSANLVASICKRFGHVYHNLQPRVTKTFLHSFLDPTKALT 321
           C++AKR+G R SD+HW+LRNF+A+ VAS CKRFGHVYHNL PRVT++ LH+FLDPTKAL 
Sbjct: 175 CLIAKRLGRRSSDNHWDLRNFTASTVASTCKRFGHVYHNLLPRVTRSLLHTFLDPTKALP 234

Query: 322 QHYGAIIGIAALGSRMVRLLILPNLEPYLHLIEPEMQLEKQKNEIKRHEAWQVYGALLCA 381
           QHYGAI G+ ALG  MVR L+LPNL PYL L+ PEM LEKQK E KRH AW VYGAL+ A
Sbjct: 235 QHYGAIQGMVALGLNMVRFLVLPNLGPYLLLLLPEMGLEKQKEEAKRHGAWLVYGALMVA 294

Query: 382 VGQCMHEKAKIFSSLLSPPTRVTSRGNGKALISMPINVGKRKASTDNLMQQQQPPLKKIA 441
            G+C++E+ K   +LLSPPT    + NGK  ++ P    KRKAS+DNL    QPPLKKIA
Sbjct: 295 AGRCLYERLKTSETLLSPPTSSVWKTNGK--LTSP-RQSKRKASSDNLT--HQPPLKKIA 349

Query: 442 TDGPGGVIAMNSMSVDNMQGSTGGYXXXXXXXXXXXXXXXRQLSNDHHMPGREVAGQQSK 501
               GG+I M+S  +  M+G+T                        HH     +A + S 
Sbjct: 350 V---GGIIQMSSTQM-QMRGTT-----------TVPQQSHTDADARHHNSPSTIAPKTSA 394

Query: 502 ASAILAQAWKDDIDAGQLLSSVVELFGERVLSFIPKPEACIFL 544
           A+           D    L  + E FGE +L F P  E   FL
Sbjct: 395 AAG---------TDVDNYLFPLFEYFGESMLMFTPTHELSFFL 428