Miyakogusa Predicted Gene

Lj6g3v0802310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0802310.1 Non Chatacterized Hit- tr|I1N0D7|I1N0D7_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,88.43,0,coiled-coil,NULL; seg,NULL; Leucine rich repeat,
ribonuclease inhibitor,Leucine-rich repeat, ribonuc,CUFF.58295.1
         (1375 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G55540.1 | Symbols: TRN1, LOP1 | tornado 1 | chr5:22496322-22...  1853   0.0  
AT1G10510.1 | Symbols: emb2004 | RNI-like superfamily protein | ...    87   1e-16
AT5G19320.1 | Symbols: RANGAP2 | RAN GTPase activating protein 2...    51   5e-06

>AT5G55540.1 | Symbols: TRN1, LOP1 | tornado 1 |
            chr5:22496322-22500543 REVERSE LENGTH=1380
          Length = 1380

 Score = 1853 bits (4799), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 901/1381 (65%), Positives = 1099/1381 (79%), Gaps = 15/1381 (1%)

Query: 4    NQNLKELQWALQAINSE---VLNLHSISFYLSQPTSACYQETDNSININISKENLPFFSD 60
            +Q+ K+L W LQAI        NL ++SF  S  T+ C   T++S+NIN++++NL   S 
Sbjct: 6    DQSFKDLSWFLQAIKDPQQTFFNLQTLSFSSSGNTTHCQLITESSMNINVTRDNLTSLSQ 65

Query: 61   LLTELAASKSTKSTLRNLEFHRVEWEIQQVRNLGTLLGNNQSIQQVVFRRNRFNGKTLSD 120
            +  ELA S  T+++LRNLEF  + WEI+ +++LG LL N   I+Q+ FR+NRF+ + L++
Sbjct: 66   IFIELATSLETQTSLRNLEFEGIFWEIELLQSLGLLLDNTSKIKQLAFRKNRFSEQCLNE 125

Query: 121  LSDILKANKVIKEIMLSESGIGSVGAGLIASALMVNESLEELQIWEDSIGSRGAEELSKM 180
            LS+ILK N+ +KE+M  ES IG  GA L+ SAL VN+SLEELQIWEDSIGS+GAEELS+M
Sbjct: 126  LSEILKRNRFLKEVMFLESSIGYRGATLLGSALQVNDSLEELQIWEDSIGSKGAEELSRM 185

Query: 181  IEVNPTLKLLTIFDSNAITATPLISAVLARNRNMEVHVWSGENG-EKSSKVVEFVPGNST 239
            IE+N +LKL +IFDS+  TATPLISAVL  NR MEVH+WSG++  ++S K+VEF+P + T
Sbjct: 186  IEMNSSLKLFSIFDSSPFTATPLISAVLGMNREMEVHMWSGDHKRDRSLKLVEFLPESKT 245

Query: 240  LRIYKLNLSGACRVICSLGMNSTVKSLDMTGVKLKSRCAKELRWVLEQNQTLKELNLSRT 299
            LRIY++++SG+CRV  +LGMN+TV+SLDMTG KL SR AKE RWVLEQN+TL+E+ LS+T
Sbjct: 246  LRIYQIDISGSCRVAAALGMNTTVRSLDMTGAKLNSRWAKEFRWVLEQNKTLREVKLSKT 305

Query: 300  CLKDKGIVYVAAGLFKNHSLQTLHLTGNWFSGVGVEHLLCPLSRFSALQMQANITLKCVT 359
             LKDK +VY+AAGLFKN SLQ+L++ GN F  VGVE LLCPLSRFSALQ+QANITL+ + 
Sbjct: 306  GLKDKAVVYIAAGLFKNKSLQSLYVDGNRFGSVGVEDLLCPLSRFSALQLQANITLRSIV 365

Query: 360  FGGGRTRIGRDGLAALTQFLTTNETVRKLGIHDDESLRSDDYVKIFKSLEKNASLKCLSL 419
            FGG  T+IGRDGL A+ + +TTNETV  LGIHDD SL  DD++ IFKSL+KNASL+  SL
Sbjct: 366  FGGSNTKIGRDGLTAVLKMVTTNETVVHLGIHDDASLGPDDFIHIFKSLQKNASLRRFSL 425

Query: 420  QGCKGVQGETLLQTIMETLHINPWIEDIDLSRTPLHSSGKTTGIYQRLGQNENTEPEM-- 477
            QGCKGV+G+ +L+ I ETL INP IE+IDL+RTPL  SGK   IYQ+LG N     E   
Sbjct: 426  QGCKGVRGDRVLEAITETLQINPLIEEIDLARTPLQDSGKADEIYQKLGHNGRKIDEAET 485

Query: 478  -DLLKDMPLTEPKSCRVFFCAQECAGKTTLCHSISQNFSASTLPYLDQVRTIVNPVEQAV 536
             D LKDMPLTEPKS R F C Q  AGKTTLC+SI Q+ SAS  PY++ VR ++NPVEQ V
Sbjct: 486  DDSLKDMPLTEPKSVRAFLCGQNYAGKTTLCNSILQSSSASGFPYVENVRNLMNPVEQVV 545

Query: 537  KTVG-MKIKTFNDEDTKISIWNLAGQHEFFSLHDLMFPGHGSASFFIIILSLFRKPSNKE 595
            KTVG MKIKTF DE+TKIS+WNLAGQHEFF+LHDLMFP   S  FF+I+LSLFRKPSNKE
Sbjct: 546  KTVGGMKIKTFKDEETKISMWNLAGQHEFFALHDLMFP---SPCFFLIVLSLFRKPSNKE 602

Query: 596  PKSTEEIEEDLQYWLRFIVSNSKRAVQQCMLPSVAVVLTHFDKINQSSQNFQQTVDSIQR 655
            PK+  E+EE+L+YWLRFIVSNS++A+QQCM P+V +VLTH +KIN  S++FQ TV  IQR
Sbjct: 603  PKTPAEVEEELEYWLRFIVSNSRKAIQQCMKPNVTIVLTHSEKINLQSESFQATVGCIQR 662

Query: 656  LRDKFQGFVDFYPTVFTVDARSSASVSKLTHHIRKTCKTILQRVPRVYQLCNDLIQILSD 715
            LRDKFQ  V+FYPTVFTVDARSS SVSKLTHHIR T K ILQRVPRVYQLCND++Q+LSD
Sbjct: 663  LRDKFQALVEFYPTVFTVDARSSPSVSKLTHHIRMTSKAILQRVPRVYQLCNDIVQLLSD 722

Query: 716  WRSEDYNKPAMKWKEFGELCQVKVPPLRIRSRHYNKEVVEMKRKAVATCLHHIGEVIYFD 775
            WRSE+ NKP M+WK F +LCQ KVP LRI+SR+ N ++VE +R A+ATCLH +GEVIYFD
Sbjct: 723  WRSENSNKPIMRWKAFADLCQFKVPSLRIKSRNENIQIVETRRHAIATCLHQMGEVIYFD 782

Query: 776  ELGFLILDCEWFCGEVLGQLIKLNVRKQHSSENSGFISRKELEKILRGSLQSPIPGMGSK 835
            +LGFLILD EWFCGEVL QLIKL+VRKQ + E +GF+SRKELEK LR SLQSPIPGM SK
Sbjct: 783  DLGFLILDYEWFCGEVLTQLIKLDVRKQSTGERNGFVSRKELEKTLRSSLQSPIPGMTSK 842

Query: 836  VFENLDASDLVRMMLKLELCYEQDPSDPNSLLLIPSILEEGRGKPQRWQLSTPDCIYAGR 895
            V E+ DA DLV+MM K+ELCYEQDPS P+S LL+PSILEEGRGK Q+WQ++T DC+Y+GR
Sbjct: 843  VLEHFDACDLVKMMKKVELCYEQDPSSPDSSLLVPSILEEGRGKTQKWQINTHDCVYSGR 902

Query: 896  HLECDDSSHMFLTPGFFPRLQVHLHNRIKALQNQHGATYFLEKYLISISINGIYIRVELG 955
            HL+CDDSSHMFLT GFFPRLQVHLHNRI  L+NQHGATY LEKYLI+I+I+GI IRVELG
Sbjct: 903  HLQCDDSSHMFLTAGFFPRLQVHLHNRIMELKNQHGATYSLEKYLIAITIHGINIRVELG 962

Query: 956  GQLGYYIDILACSTKNLTETLRVIQQLIIPAIQSVCHGITMTENVIRPECVRNLTPPRYR 1015
            GQLG YID+LACS+K+LTETLR+I QLIIPAIQS C G+ + E++IRP+CV++LTPPR+R
Sbjct: 963  GQLGNYIDVLACSSKSLTETLRLIHQLIIPAIQSSCRGVILLEHIIRPQCVQDLTPPRFR 1022

Query: 1016 RTQFVXXXXXXXXXXXXPAESMYDYQHTWSSVLDSGRPTLQEGFDLARDLLSDDDFREVL 1075
            ++QFV            PAE+MYDYQHTW SVLDSG+  L+ GFDLAR+LLSDDDFREVL
Sbjct: 1023 QSQFVSLHRLKEALSSVPAETMYDYQHTWDSVLDSGKTVLRAGFDLARNLLSDDDFREVL 1082

Query: 1076 HRRYHDLHNLAQELQVPPENNIEGQDQSITSSSESGTVDPTFGGIAKGVEEVLQRLRIIE 1135
             RRYHDLHNLAQELQVP + N E  D  +  ++E   VDP+FGGIAKGVE VLQRL+IIE
Sbjct: 1083 QRRYHDLHNLAQELQVPTDENPEA-DNHVPVTNELEKVDPSFGGIAKGVEAVLQRLKIIE 1141

Query: 1136 QEIRDLKQEIQGXXXXXXXXXXXXXXKVNYIATFNLQVEERKVPNMFYFVNTENYSRRLI 1195
            QEIRDLKQEIQG              KVNY+  +N+Q++ERKVPNMFYF+  ENY RRLI
Sbjct: 1142 QEIRDLKQEIQGLRYYEHRLLIQLHHKVNYLVNYNVQMDERKVPNMFYFIRAENYGRRLI 1201

Query: 1196 TTMVSGMTALRLHMLCEFRGQMHVVEDQMGCEMMQVDNMAVKALAPYMKKFMTLVTFALK 1255
            T+MV GM ALR+HMLCEFR +MHVVEDQ+GC++MQ+DN AVK LAPYM  FM LVTFAL+
Sbjct: 1202 TSMVPGMVALRIHMLCEFRREMHVVEDQLGCDVMQIDNQAVKCLAPYMTNFMKLVTFALR 1261

Query: 1256 IGAHLAAGMGQMIPDLGKEVAHLTGSSVLFXXXXXXXXXXXXXXXRRNRSMEGSRGI-QQ 1314
            IGA+ AAGMG MIPDL   +AHL   +V+                 RNR  +  R I +Q
Sbjct: 1262 IGANWAAGMGHMIPDLSHTIAHLANPAVMTGAAGAAGAIGVAAALGRNRGRD--RDIQEQ 1319

Query: 1315 DLRAAQQWVVDFLRERRCSTGKDIAEKFGLWRVRYRDSGQIAWICRRHIYSRSAEIIEVP 1374
            + RAAQQW++D+LRE+ CSTG+DIAEKFGLWRVRYRD G IAWIC+RH+ +R+ E+I+VP
Sbjct: 1320 EQRAAQQWLIDYLREQTCSTGRDIAEKFGLWRVRYRDDGSIAWICKRHMITRAHEVIQVP 1379

Query: 1375 V 1375
            +
Sbjct: 1380 L 1380


>AT1G10510.1 | Symbols: emb2004 | RNI-like superfamily protein |
           chr1:3461771-3465590 FORWARD LENGTH=605
          Length = 605

 Score = 86.7 bits (213), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 153/305 (50%), Gaps = 27/305 (8%)

Query: 97  LGNNQSIQQVVFRRNRFNGKTLSDLSDILKANKVIKEIMLSESGIGSVGAGLIASALMVN 156
           LG NQ++++V F  N      +     +L++N ++K + LS + IG  GA  + + LM N
Sbjct: 194 LGYNQTVEEVSFSANGITAAGVKAFDGVLQSNIMLKILNLSGNPIGDEGAKTLCATLMEN 253

Query: 157 ESLEELQIWEDSIGSRGAEELSKMIEVNPTLKLLTIFDSNAITA---TPLISAVLARNRN 213
            S+E LQ+    IG  GA+E++++++ N TL+++ + ++N I     T L  A+L  N  
Sbjct: 254 SSIEILQLNSTDIGDEGAKEIAELLKRNSTLRIIEL-NNNMIDYSGFTSLAGALLENNTI 312

Query: 214 MEVHVWSGENGE-KSSKVVEFVPGNSTLRIYKLNLSG------ACRVICSLGMNS---TV 263
             +H+     G   ++ + + + GN +LR  +L+L G        R + + G++S    V
Sbjct: 313 RNLHLNGNYGGALGANALAKGLEGNKSLR--ELHLHGNSIGDEGTRALMA-GLSSHKGKV 369

Query: 264 KSLDMTGVKLKSRCAKELRWVLEQNQTLKELNLSRTCLKDKGIVYVAAGLFKNHSLQTLH 323
             LD+    + ++ A  +   ++++++L  LNL    + D+G   +A  L +N S+ T+ 
Sbjct: 370 ALLDLGNNSISAKGAFYVAEYIKRSKSLVWLNLYMNDIGDEGAEKIADSLKQNRSIATID 429

Query: 324 LTGNWFSGVGVEHLLCPLSRFSALQMQANITLKCVTFGGGRTRIGRDGLAALTQFLTTNE 383
           L GN     GV  +        AL+  A IT    T   G   IG DG  AL++ L  + 
Sbjct: 430 LGGNNIHAEGVNAIA------QALKDNAIIT----TLEVGYNPIGPDGAKALSEILKFHG 479

Query: 384 TVRKL 388
            V+ L
Sbjct: 480 NVKTL 484



 Score = 67.0 bits (162), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 96/424 (22%), Positives = 182/424 (42%), Gaps = 50/424 (11%)

Query: 68  SKSTKSTLRNLEFHRVEWEIQQVRNLGTLLGNNQSIQQVVFRRNRFNGKTLSDLSDILKA 127
           S  T +   N     V+W I    NL         +Q    + +R   + L++ +  L++
Sbjct: 121 SPKTSAGENNSSTQGVKWSIGAGTNL---------LQGFAAKVDREAKQRLNEFAKELRS 171

Query: 128 NKVIKEIMLSESGIGSVGAGLIASALMVNESLEELQIWEDSIGSRGAEELSKMIEVNPTL 187
               + + +S    G  G   +A +L  N+++EE+    + I + G +    +++ N  L
Sbjct: 172 ---FRSVDMSGCNFGDEGLFFLAESLGYNQTVEEVSFSANGITAAGVKAFDGVLQSNIML 228

Query: 188 KLLTIFDSNAIT--ATPLISAVLARNRNMEV-HVWSGENGEKSSK-VVEFVPGNSTLRIY 243
           K+L +   N I       + A L  N ++E+  + S + G++ +K + E +  NSTLRI 
Sbjct: 229 KILNL-SGNPIGDEGAKTLCATLMENSSIEILQLNSTDIGDEGAKEIAELLKRNSTLRII 287

Query: 244 KLN-----LSGACRVICSLGMNSTVKSLDMTGVKLKSRCAKELRWVLEQNQTLKELNLSR 298
           +LN      SG   +  +L  N+T+++L + G    +  A  L   LE N++L+EL+L  
Sbjct: 288 ELNNNMIDYSGFTSLAGALLENNTIRNLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 347

Query: 299 TCLKDKGIVYVAAGLFKNHS-LQTLHLTGNWFSGVGVEHLLCPLSRFSAL---------- 347
             + D+G   + AGL  +   +  L L  N  S  G  ++   + R  +L          
Sbjct: 348 NSIGDEGTRALMAGLSSHKGKVALLDLGNNSISAKGAFYVAEYIKRSKSLVWLNLYMNDI 407

Query: 348 ----------QMQANITLKCVTFGGGRTRIGRDGLAALTQFLTTNETVRKLGIHDDESLR 397
                      ++ N ++  +  GG    I  +G+ A+ Q L  N  +  L +  +  + 
Sbjct: 408 GDEGAEKIADSLKQNRSIATIDLGG--NNIHAEGVNAIAQALKDNAIITTLEVGYNP-IG 464

Query: 398 SDDYVKIFKSLEKNASLKCLSLQGCK-GVQGETLLQTIMETLHINPWIEDIDLSRTPLHS 456
            D    + + L+ + ++K L L  C+   +G    + + + L  N  I  +DL    L  
Sbjct: 465 PDGAKALSEILKFHGNVKTLKLGWCQIAAKGA---EHVADMLRYNNTISVLDLRANGLRD 521

Query: 457 SGKT 460
            G +
Sbjct: 522 EGAS 525



 Score = 57.4 bits (137), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 83/373 (22%), Positives = 158/373 (42%), Gaps = 23/373 (6%)

Query: 27  ISFYLSQPTSACYQETDNSININISKENL-----PFFSDLLTELAASKSTKSTLRNLEFH 81
           +SF  +  T+A  +  D  +  NI  + L     P   +    L A+    S++  L+ +
Sbjct: 203 VSFSANGITAAGVKAFDGVLQSNIMLKILNLSGNPIGDEGAKTLCATLMENSSIEILQLN 262

Query: 82  RVEWEIQQVRNLGTLLGNNQSIQQVVFRRNRFNGKTLSDLSDILKANKVIKEIMLSESGI 141
             +   +  + +  LL  N +++ +    N  +    + L+  L  N  I+ + L+ +  
Sbjct: 263 STDIGDEGAKEIAELLKRNSTLRIIELNNNMIDYSGFTSLAGALLENNTIRNLHLNGNYG 322

Query: 142 GSVGAGLIASALMVNESLEELQIWEDSIGSRGAEELSKMIEVNPTLKLLTIFDSNAITAT 201
           G++GA  +A  L  N+SL EL +  +SIG  G   L   +  +     L    +N+I+A 
Sbjct: 323 GALGANALAKGLEGNKSLRELHLHGNSIGDEGTRALMAGLSSHKGKVALLDLGNNSISAK 382

Query: 202 P--LISAVLARNRNME-VHVWSGENG-EKSSKVVEFVPGNSTLRIYKL-----NLSGACR 252
               ++  + R++++  ++++  + G E + K+ + +  N ++    L     +  G   
Sbjct: 383 GAFYVAEYIKRSKSLVWLNLYMNDIGDEGAEKIADSLKQNRSIATIDLGGNNIHAEGVNA 442

Query: 253 VICSLGMNSTVKSLDMTGVKLKSRCAKELRWVLEQNQTLKELNLSRTCLKDKGIVYVAAG 312
           +  +L  N+ + +L++    +    AK L  +L+ +  +K L L    +  KG  +VA  
Sbjct: 443 IAQALKDNAIITTLEVGYNPIGPDGAKALSEILKFHGNVKTLKLGWCQIAAKGAEHVADM 502

Query: 313 LFKNHSLQTLHLTGNWFSGVGVEHLLCPLSRFSALQMQANITLKCVTFGGGRTRIGRDGL 372
           L  N+++  L L  N     G   L   L          N  L  V  G    R   DG 
Sbjct: 503 LRYNNTISVLDLRANGLRDEGASCLARSLK-------VVNEALTSVDLGFNEIR--DDGA 553

Query: 373 AALTQFLTTNETV 385
            A+ Q L  NE V
Sbjct: 554 FAIAQALKANEDV 566


>AT5G19320.1 | Symbols: RANGAP2 | RAN GTPase activating protein 2 |
           chr5:6505310-6506947 REVERSE LENGTH=545
          Length = 545

 Score = 51.2 bits (121), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 118/271 (43%), Gaps = 29/271 (10%)

Query: 90  VRNLGTLLGNNQSIQQVVFRRNRFNGKTLSDLSDILKANKVIKEIMLSESGIGSVGAGLI 149
           VR  G LL +  S++++    +  + +    +S+++ + + ++ +    +  G  GA  I
Sbjct: 231 VRAFGALLKSLSSLEELYLMNDGISKEAAQAVSELIPSTENLRVLHFHNNMTGDEGALAI 290

Query: 150 ASALMVNESLEELQIWEDSIGSRGAEELSKMIEVNPTLKLLTIFDSNAITATPLISAVLA 209
           A  +  +  LE  +     +GS+G   LS+ +E    ++ L + D               
Sbjct: 291 AEVVKRSPLLENFRCSSTRVGSKGGIALSEALEHCTHMEKLDLRD--------------- 335

Query: 210 RNRNMEVHVWSGENGEKSSKVVEFVPGNSTLRIYKLNLS--GACRVICSLGMN-STVKSL 266
                  +++  E G   SK +      + L +  LNL   GA  ++ +L  + S ++ L
Sbjct: 336 -------NMFGTEAGVSLSKTLSSFKHMTELYLSYLNLEDEGAIAIVNALKESASPIEVL 388

Query: 267 DMTGVKLKSRCAKELRWVLEQNQTLKELNLSRTCLKDKGIVYVAAGLFKNHS-LQTLHLT 325
           +M G  +    A  +   +   Q L +LNLS   LKD+G V +A  + + HS LQ + ++
Sbjct: 389 EMAGNDITVEAASAIAACVAAKQDLNKLNLSENELKDEGCVQIANCIEEGHSKLQYIDMS 448

Query: 326 GNWFSGVG---VEHLLCPLSRFSALQMQANI 353
            N+    G   + H++     F  L +  NI
Sbjct: 449 TNYIRRAGARALAHVVVKKEAFKLLNIDGNI 479