Miyakogusa Predicted Gene
- Lj6g3v0802240.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0802240.1 Non Chatacterized Hit- tr|I1LE46|I1LE46_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,24.89,2e-18,Frigida,Frigida-like; seg,NULL; coiled-coil,NULL;
FAMILY NOT NAMED,NULL,CUFF.58290.1
(499 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G16320.1 | Symbols: FRL1 | FRIGIDA like 1 | chr5:5344507-5345... 108 8e-24
AT1G31814.1 | Symbols: FRL2 | FRIGIDA like 2 | chr1:11412985-114... 94 2e-19
AT5G48385.1 | Symbols: | FRIGIDA-like protein | chr5:19609471-1... 74 2e-13
AT5G27220.1 | Symbols: | Frigida-like protein | chr5:9578757-95... 66 5e-11
AT3G22440.1 | Symbols: | FRIGIDA-like protein | chr3:7959854-79... 66 6e-11
AT5G27230.1 | Symbols: | Frigida-like protein | chr5:9584255-95... 64 4e-10
AT4G14900.1 | Symbols: | FRIGIDA-like protein | chr4:8521759-85... 60 3e-09
>AT5G16320.1 | Symbols: FRL1 | FRIGIDA like 1 | chr5:5344507-5345919
FORWARD LENGTH=470
Length = 470
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 150/350 (42%), Gaps = 39/350 (11%)
Query: 75 ELSVLCEKMDGVGLRNFVKARFADRIRVQAELPGALRCAPDPAEMVLQSLEGLNGVGGXX 134
EL LCEK+DG+GL ++ + D + E+ A+R +PD A MVL ++EG N
Sbjct: 100 ELRALCEKIDGIGLIKYLIRIWDDETPLNQEVSAAIRYSPDTASMVLDAIEGSNYTPSSS 159
Query: 135 XXXXXXXXXXXXXXXXXQLRXXXXXXXXXXXXXXXXXXXXWRKWLVVDAASALGAIGFLN 194
L W+ + V AL FL+
Sbjct: 160 GRSFDVRRVFVLLMEV--LIEINANITVDTRNRAKKLAYHWKSKVGVKPFEALV---FLH 214
Query: 195 IVSAFGLVSEFSTDELISFSALAAVNDDFPELYRAICLTDGVPNCLTGRVPDIIQKLINK 254
+V+AF L SEF T+EL + + A Y+ L RV +I+ L++
Sbjct: 215 LVAAFELGSEFDTEELSDYVFMIAK-------YKQATLVCNKIGVDRKRVGKLIKTLLDS 267
Query: 255 GKYSLAVKYVLEFDLADTIPPVHILEACVDESKKLAIRLSQEEKPLL----EITAREICS 310
GK LAVK++ E + D P+ +L++ + + ++ A+R+ E+ L E + +E+ +
Sbjct: 268 GKPILAVKFMYECGMTDEFEPIPVLKSYIKDCREAALRVCVEDNYSLKSQNEASDKEVSA 327
Query: 311 LKLVIKIIDSHKLECDYLRASLEKRIEQLKRQKKACMXXXXXXXXXXXXQHDQQSGIKRP 370
LK +IKII LE ++ + +E+R+E+L++ K Q QQ G KR
Sbjct: 328 LKPLIKIIKDQNLESEFTQEKVEERVEELEKNK----ALRKRNTTNPPKQEPQQKGKKRT 383
Query: 371 RSSAPVGTEAVRKNFNNGNTAIHQYQQSLVHPSGLF-PEHP------NPY 413
R + NG+ QQ L P L PEH NPY
Sbjct: 384 R------------DCKNGSQVPVPSQQLLSRPEALLMPEHSHHGLQLNPY 421
>AT1G31814.1 | Symbols: FRL2 | FRIGIDA like 2 |
chr1:11412985-11414406 REVERSE LENGTH=473
Length = 473
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 135/307 (43%), Gaps = 23/307 (7%)
Query: 75 ELSVLCEKMDGVGLRNFVKARFADRIRVQAELPGALRCAPDPAEMVLQSLEGLNGVGGXX 134
EL CEK DG GL N++ R+ + ELP A+RC+ +PA +VL ++E G
Sbjct: 89 ELRKFCEKNDGKGLGNYMIENSRKRLSINEELPNAIRCSENPAPLVLDAIE------GSY 142
Query: 135 XXXXXXXXXXXXXXXXXQLRXXXXXXXXXXXXXXXXXXXXWRKWLVVDAASALG-----A 189
++ + + D +G A
Sbjct: 143 HCSSPSSSSSARAIDVKRIFVLLLEALIEINANLTNDLRERARTIAYDWKPNIGNKPSEA 202
Query: 190 IGFLNIVSAFGLVSEFSTDELISFSALAAVNDDFPELYRAICLTDGVPNCLTGRVPDIIQ 249
+GFL++V+AF L S FST+E+ + L + + + I L R+ ++Q
Sbjct: 203 LGFLHLVAAFELGSLFSTEEICDYIFLISKYKQATTICKKIGLD-------RNRIGVLVQ 255
Query: 250 KLINKGKYSLAVKYVLEFDLADTIPPVHILEACVDESKKLAIRLSQEEKPLL----EITA 305
K ++ G+ +A++++ E ++ PV IL+ + S++ A R+ E L E T
Sbjct: 256 KFLDTGRLLVAIRFIYENEMVGEFEPVSILKTSLKNSREAAKRVCAEGNYSLKVQNEATD 315
Query: 306 REICSLKLVIKIIDSHKLECDYLRASLEKRIEQLKRQKKACMXXXXXXXXXXXXQ-HDQQ 364
+E+ +L+ VIK++ +E +++ LE+ +++L+ QK Q +Q+
Sbjct: 316 KELSALRAVIKVVKEKNIESEFMEEKLEECVKELEDQKAQRKRATKFNSPANPQQPQEQK 375
Query: 365 SGIKRPR 371
KRPR
Sbjct: 376 VDNKRPR 382
>AT5G48385.1 | Symbols: | FRIGIDA-like protein |
chr5:19609471-19611712 FORWARD LENGTH=558
Length = 558
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 19/166 (11%)
Query: 185 SALGAIGFLNIVSAFGLVSEFSTDELISFSALAAVNDDFPELYRAICLTDGVPNCLTGRV 244
++L A FL +++ F +V++F DEL+ + + EL R++ L + ++
Sbjct: 302 NSLEAHAFLQLLATFAIVADFKEDELLKLIPMVSRRRQAAELCRSLGLAE--------KM 353
Query: 245 PDIIQKLINKGKYSLAVKYVLEFDLADTIPPVHILEACVDESKKLAIRLSQEEKP----- 299
P +I+ L+N GK AV F+L + PV +L++ + E++ R S + +P
Sbjct: 354 PGVIEVLVNSGKQIDAVNLAFAFELTEQFSPVSLLKSYLIEAR----RSSPQGRPGNASP 409
Query: 300 --LLEITAREICSLKLVIKIIDSHKLECDYLRASLEKRIEQLKRQK 343
E RE+ LK VIK I+ H LE Y L KRI QL++ K
Sbjct: 410 AVQDEFNERELIGLKTVIKCIEEHSLEEQYPVEPLHKRILQLEKAK 455
>AT5G27220.1 | Symbols: | Frigida-like protein | chr5:9578757-9582752
FORWARD LENGTH=1181
Length = 1181
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 85/156 (54%), Gaps = 18/156 (11%)
Query: 175 WRKWLVVDAA--SALGAIGFLNIVSAFGLVSEFSTDELISFSALAAVNDDFPELYRAICL 232
W W++ ++ S L A GFL ++ A+GLV S D + F++ A P+L+ ++ L
Sbjct: 932 W-SWMMGNSTQMSPLEAWGFLQLIVAYGLVHATSQDNTLRFASYVAHFKQAPKLFESLGL 990
Query: 233 TDGVPNCLTGRVPDIIQKLINKGKYSLAVKYVLEFDLADTIPPVHILEACVDESKKLAIR 292
+ +PN +++KL+++ Y +A++++ F L P+ +L+ + + +R
Sbjct: 991 SYAMPN--------LVKKLLDERHYFMAIRFIFYFKLKFNFSPLELLKDEI-----ITLR 1037
Query: 293 LSQEEKPLLEITA--REICSLKLVIKIIDSHKLECD 326
+S +EK L+ A R+ LK +I++I+ KL+ D
Sbjct: 1038 VSTKEKRRLDSQAEDRDAAKLKDIIELIEDFKLDID 1073
>AT3G22440.1 | Symbols: | FRIGIDA-like protein |
chr3:7959854-7961886 FORWARD LENGTH=532
Length = 532
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 88/159 (55%), Gaps = 18/159 (11%)
Query: 192 FLNIVSAFGLVSEFSTDELISFSAL---AAVNDDFPELYRAICLTDGVPNCLTGRVPDII 248
FL + FG+V +++L + L +A P+L ++ L D ++PD+I
Sbjct: 259 FLQHLVTFGIVK---SEDLALYRKLVVGSAWRKQMPKLAVSVGLGD--------QMPDMI 307
Query: 249 QKLINKGKYSLAVKYVLEFDLADTIPPVHILEACVDESKKLAIRLSQEE----KPLLEIT 304
++LI++G+ AV + E L D PPV +L+A + ++KK A + ++ + +
Sbjct: 308 EELISRGQQLDAVHFTYEVGLVDKFPPVPLLKAYLRDAKKSAASIMEDSSNTGRATHLVA 367
Query: 305 AREICSLKLVIKIIDSHKLECDYLRASLEKRIEQLKRQK 343
+E +LK V+K I+ +KLE ++ +L+KR++QL++ K
Sbjct: 368 RKEQSALKAVLKCIEEYKLEEEFPPENLKKRLDQLEKTK 406
>AT5G27230.1 | Symbols: | Frigida-like protein |
chr5:9584255-9587838 FORWARD LENGTH=948
Length = 948
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 110/273 (40%), Gaps = 21/273 (7%)
Query: 75 ELSVLCEKMDGVGLRNFVKARFADRIRVQAELPGALRCAPDPAEMVLQSLEGL---NGVG 131
+L++L + LR V+ + ++ +L AL+C PDPA++ L + L N G
Sbjct: 540 KLNILSGSIKADMLRELVEKQ---PLKESEDLSNALKCTPDPAKLFLDTSMALCPTNTEG 596
Query: 132 GXXXXXXXXXXXXXXXXXXXQLRXXXXXXXXXXXXXXXXXXXXWRKWLVVDAASALGAIG 191
G + W+ + L I
Sbjct: 597 GYEFKMLITSASCSLLLNQLK--KLLPKIGHPVKGDAKKLAVYWKDKIAKSKRDQLEVIC 654
Query: 192 FLNIVSAFGLVSEFSTDELISFSALAAVNDDFPELYRAICLTDGVPNCLTGRVPDIIQKL 251
FL + FG+VSEF D+L+ + P+L + + L D +P IQ L
Sbjct: 655 FLQFLGIFGIVSEFKADDLLGLLDNSYWQTVSPDLCQFLGLDDAIPG--------FIQNL 706
Query: 252 INKGKYSLAVKYVLEFDLADTIPPVH-ILEACVDESKKLAIRLSQEEK--PLLEITA--R 306
I G A+ Y+ F + PV I+ + +K+ A + +E K ++ A R
Sbjct: 707 IKTGHRIKAIDYIYSFGMVHRFQPVSAIINDSLRITKESAEKSYREAKNESTTQVAAIDR 766
Query: 307 EICSLKLVIKIIDSHKLECDYLRASLEKRIEQL 339
++ +L+ IK I HKLE ++ LE++I+ L
Sbjct: 767 QVRALRAAIKCISCHKLESEFQLGDLEEQIKSL 799
>AT4G14900.1 | Symbols: | FRIGIDA-like protein |
chr4:8521759-8523607 REVERSE LENGTH=532
Length = 532
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 85/159 (53%), Gaps = 18/159 (11%)
Query: 192 FLNIVSAFGLVSEFSTDELISFSAL---AAVNDDFPELYRAICLTDGVPNCLTGRVPDII 248
FL + FG+V + D+L + L +A P+L ++ L D ++PD+I
Sbjct: 257 FLQHLVTFGIVKK---DDLALYRKLVVGSAWRKQMPKLAVSVGLGD--------QMPDMI 305
Query: 249 QKLINKGKYSLAVKYVLEFDLADTIPPVHILEACVDESKKLAIRLSQEE----KPLLEIT 304
++LI +G+ AV + E L PPV +L+A + ++KK ++ + + +
Sbjct: 306 EELIIRGQQLDAVHFTFEVGLVHLFPPVPLLKAYLRDAKKATALITDDSNNSGRSAHLVA 365
Query: 305 AREICSLKLVIKIIDSHKLECDYLRASLEKRIEQLKRQK 343
+E +L+ V+K I+ +KLE ++ +L+KR++QL++ K
Sbjct: 366 RKEQSALRAVLKCIEEYKLEEEFPPENLKKRLDQLEKTK 404