Miyakogusa Predicted Gene

Lj6g3v0775980.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0775980.1 Non Chatacterized Hit- tr|I3S9B7|I3S9B7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.98,0,RIBOSOMALS10,Ribosomal protein S10;
Ribosomal_S10,Ribosomal protein S10; RIBOSOMAL_S10,Ribosomal
pro,gene.g64761.t1.1
         (196 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G13120.2 | Symbols:  | Ribosomal protein S10p/S20e family pro...   226   1e-59
AT3G13120.1 | Symbols:  | Ribosomal protein S10p/S20e family pro...   226   1e-59
AT3G47370.3 | Symbols:  | Ribosomal protein S10p/S20e family pro...    50   8e-07
AT3G47370.1 | Symbols:  | Ribosomal protein S10p/S20e family pro...    50   8e-07
AT3G47370.2 | Symbols:  | Ribosomal protein S10p/S20e family pro...    50   8e-07
AT5G62300.2 | Symbols:  | Ribosomal protein S10p/S20e family pro...    50   8e-07
AT5G62300.1 | Symbols:  | Ribosomal protein S10p/S20e family pro...    50   8e-07
AT3G45030.1 | Symbols:  | Ribosomal protein S10p/S20e family pro...    50   8e-07

>AT3G13120.2 | Symbols:  | Ribosomal protein S10p/S20e family
           protein | chr3:4220310-4221526 REVERSE LENGTH=191
          Length = 191

 Score =  226 bits (575), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 105/107 (98%), Positives = 106/107 (99%)

Query: 90  DADAMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSP 149
           DAD MAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSP
Sbjct: 85  DADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSP 144

Query: 150 HVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 196
           HVHKDARFHFEIRTHQR+IDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 145 HVHKDARFHFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 191


>AT3G13120.1 | Symbols:  | Ribosomal protein S10p/S20e family
           protein | chr3:4220310-4221526 REVERSE LENGTH=191
          Length = 191

 Score =  226 bits (575), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 105/107 (98%), Positives = 106/107 (99%)

Query: 90  DADAMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSP 149
           DAD MAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSP
Sbjct: 85  DADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSP 144

Query: 150 HVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 196
           HVHKDARFHFEIRTHQR+IDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 145 HVHKDARFHFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 191


>AT3G47370.3 | Symbols:  | Ribosomal protein S10p/S20e family
           protein | chr3:17453671-17454437 REVERSE LENGTH=122
          Length = 122

 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 2/100 (2%)

Query: 98  QKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF 157
            KIRI L S  V  +E  C  ++  A++   +  GPV +PTK       K+P       +
Sbjct: 21  HKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTW 80

Query: 158 -HFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 196
             FE+R H+R+ID L+ +   +  +  + +  GV+VEV +
Sbjct: 81  DRFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 119


>AT3G47370.1 | Symbols:  | Ribosomal protein S10p/S20e family
           protein | chr3:17453671-17454437 REVERSE LENGTH=122
          Length = 122

 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 2/100 (2%)

Query: 98  QKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF 157
            KIRI L S  V  +E  C  ++  A++   +  GPV +PTK       K+P       +
Sbjct: 21  HKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTW 80

Query: 158 -HFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 196
             FE+R H+R+ID L+ +   +  +  + +  GV+VEV +
Sbjct: 81  DRFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 119


>AT3G47370.2 | Symbols:  | Ribosomal protein S10p/S20e family
           protein | chr3:17453671-17454437 REVERSE LENGTH=122
          Length = 122

 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 2/100 (2%)

Query: 98  QKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF 157
            KIRI L S  V  +E  C  ++  A++   +  GPV +PTK       K+P       +
Sbjct: 21  HKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTW 80

Query: 158 -HFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 196
             FE+R H+R+ID L+ +   +  +  + +  GV+VEV +
Sbjct: 81  DRFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 119


>AT5G62300.2 | Symbols:  | Ribosomal protein S10p/S20e family
           protein | chr5:25021388-25022235 REVERSE LENGTH=124
          Length = 124

 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)

Query: 99  KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 157
           KIRI L S  V  +E  C  ++  A++   +  GPV +PTK       K+P       + 
Sbjct: 24  KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83

Query: 158 HFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 196
            FE+R H+R+ID L+ +   +  +  + +  GV+VEV +
Sbjct: 84  RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 121


>AT5G62300.1 | Symbols:  | Ribosomal protein S10p/S20e family
           protein | chr5:25021388-25022235 REVERSE LENGTH=124
          Length = 124

 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)

Query: 99  KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 157
           KIRI L S  V  +E  C  ++  A++   +  GPV +PTK       K+P       + 
Sbjct: 24  KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83

Query: 158 HFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 196
            FE+R H+R+ID L+ +   +  +  + +  GV+VEV +
Sbjct: 84  RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 121


>AT3G45030.1 | Symbols:  | Ribosomal protein S10p/S20e family
           protein | chr3:16471606-16472312 REVERSE LENGTH=124
          Length = 124

 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)

Query: 99  KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 157
           KIRI L S  V  +E  C  ++  A++   +  GPV +PTK       K+P       + 
Sbjct: 24  KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83

Query: 158 HFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 196
            FE+R H+R+ID L+ +   +  +  + +  GV+VEV +
Sbjct: 84  RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 121