Miyakogusa Predicted Gene

Lj6g3v0753200.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0753200.2 Non Chatacterized Hit- tr|G7IDI7|G7IDI7_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,55.07,4e-16,seg,NULL,CUFF.58303.2
         (119 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G32140.1 | Symbols:  | EamA-like transporter family | chr4:15...   194   8e-51

>AT4G32140.1 | Symbols:  | EamA-like transporter family |
           chr4:15523037-15525195 REVERSE LENGTH=394
          Length = 394

 Score =  194 bits (494), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 93/107 (86%), Positives = 101/107 (94%)

Query: 13  YIVWPLSALGIEPKFTIPHSARVDEVVLANGFIGSVLSDYFWALCVVWTTPLVATLGMLL 72
           ++VWPL+ALGIEPKFTIPHS +VDEVVLANGFIGSVLSDYFWAL VVWTTPLVATLGM L
Sbjct: 288 WLVWPLTALGIEPKFTIPHSVKVDEVVLANGFIGSVLSDYFWALSVVWTTPLVATLGMSL 347

Query: 73  TIPLAMLADMLIHGRHYSALYILGSVQVFAGFVIANISDWMTKKLGL 119
           TIPLAM+ADM+IHGRHYSA+YILGS QVFAGFVIANISD  +KKLGL
Sbjct: 348 TIPLAMVADMMIHGRHYSAIYILGSTQVFAGFVIANISDLFSKKLGL 394