Miyakogusa Predicted Gene
- Lj6g3v0727760.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0727760.1 Non Chatacterized Hit- tr|F7HLY0|F7HLY0_CALJA
Uncharacterized protein OS=Callithrix jacchus
GN=CCDC2,32.14,9e-19,DUF812,Protein of unknown function DUF812; JM1
PROTEIN,Protein of unknown function DUF812; coiled-co,CUFF.58187.1
(340 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G55830.1 | Symbols: | unknown protein; CONTAINS InterPro DOM... 211 8e-55
AT1G55830.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 210 9e-55
>AT1G55830.1 | Symbols: | unknown protein; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF812
(InterPro:IPR008530); Has 10940 Blast hits to 7289
proteins in 653 species: Archae - 228; Bacteria - 791;
Metazoa - 6174; Fungi - 805; Plants - 342; Viruses - 19;
Other Eukaryotes - 2581 (source: NCBI BLink). |
chr1:20867918-20869698 REVERSE LENGTH=412
Length = 412
Score = 211 bits (536), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 117/218 (53%), Positives = 142/218 (65%)
Query: 120 YIEQLNEQVQAKTNYLSTLESEWDTVRKPLEERKRNLEESLYSNSPDAQAMLQKLRXXXX 179
Y+EQLN+Q+ K + L+ +WD VR LE +K L + L+ P+A+ KLR
Sbjct: 191 YLEQLNQQLVVKRCNIMDLKKQWDDVRLTLETKKLLLLDQLHVEEPEAKEKFHKLRKTEL 250
Query: 180 XXXXXXXXXXNREEEHTKLLADLEKQQKVASRKSYTHRIKEITKNSRKQDADIERILKET 239
RE+E L +LE+Q K A RKSY H IKEITKNSRK D DI+RI ET
Sbjct: 251 DLQSLSSEIQKREDERCNLYNELERQPKAAPRKSYIHGIKEITKNSRKLDTDIQRISGET 310
Query: 240 REVQLESNSIQERLHRTYAVADEIVFREAKKDPTGLQVYRLLVSIHKGFEQISEKILATD 299
RE+QLE NSIQERLHR+YAV DE+V RE KKDP QVY+LL SIH FEQISEKIL TD
Sbjct: 311 RELQLEKNSIQERLHRSYAVVDEMVTREVKKDPAVRQVYKLLTSIHSIFEQISEKILMTD 370
Query: 300 RIRREVAEYEMKLAATASTSLDVSKLQADLDVIIRENE 337
R RRE +YE KL + + + + KLQADLD I +ENE
Sbjct: 371 RFRRETVDYEKKLGSITARGMSLEKLQADLDAIRKENE 408
>AT1G55830.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF812
(InterPro:IPR008530). | chr1:20867918-20870205 REVERSE
LENGTH=493
Length = 493
Score = 210 bits (535), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 117/218 (53%), Positives = 142/218 (65%)
Query: 120 YIEQLNEQVQAKTNYLSTLESEWDTVRKPLEERKRNLEESLYSNSPDAQAMLQKLRXXXX 179
Y+EQLN+Q+ K + L+ +WD VR LE +K L + L+ P+A+ KLR
Sbjct: 272 YLEQLNQQLVVKRCNIMDLKKQWDDVRLTLETKKLLLLDQLHVEEPEAKEKFHKLRKTEL 331
Query: 180 XXXXXXXXXXNREEEHTKLLADLEKQQKVASRKSYTHRIKEITKNSRKQDADIERILKET 239
RE+E L +LE+Q K A RKSY H IKEITKNSRK D DI+RI ET
Sbjct: 332 DLQSLSSEIQKREDERCNLYNELERQPKAAPRKSYIHGIKEITKNSRKLDTDIQRISGET 391
Query: 240 REVQLESNSIQERLHRTYAVADEIVFREAKKDPTGLQVYRLLVSIHKGFEQISEKILATD 299
RE+QLE NSIQERLHR+YAV DE+V RE KKDP QVY+LL SIH FEQISEKIL TD
Sbjct: 392 RELQLEKNSIQERLHRSYAVVDEMVTREVKKDPAVRQVYKLLTSIHSIFEQISEKILMTD 451
Query: 300 RIRREVAEYEMKLAATASTSLDVSKLQADLDVIIRENE 337
R RRE +YE KL + + + + KLQADLD I +ENE
Sbjct: 452 RFRRETVDYEKKLGSITARGMSLEKLQADLDAIRKENE 489