Miyakogusa Predicted Gene

Lj6g3v0727760.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0727760.1 Non Chatacterized Hit- tr|F7HLY0|F7HLY0_CALJA
Uncharacterized protein OS=Callithrix jacchus
GN=CCDC2,32.14,9e-19,DUF812,Protein of unknown function DUF812; JM1
PROTEIN,Protein of unknown function DUF812; coiled-co,CUFF.58187.1
         (340 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G55830.1 | Symbols:  | unknown protein; CONTAINS InterPro DOM...   211   8e-55
AT1G55830.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   210   9e-55

>AT1G55830.1 | Symbols:  | unknown protein; CONTAINS InterPro
           DOMAIN/s: Protein of unknown function DUF812
           (InterPro:IPR008530); Has 10940 Blast hits to 7289
           proteins in 653 species: Archae - 228; Bacteria - 791;
           Metazoa - 6174; Fungi - 805; Plants - 342; Viruses - 19;
           Other Eukaryotes - 2581 (source: NCBI BLink). |
           chr1:20867918-20869698 REVERSE LENGTH=412
          Length = 412

 Score =  211 bits (536), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 117/218 (53%), Positives = 142/218 (65%)

Query: 120 YIEQLNEQVQAKTNYLSTLESEWDTVRKPLEERKRNLEESLYSNSPDAQAMLQKLRXXXX 179
           Y+EQLN+Q+  K   +  L+ +WD VR  LE +K  L + L+   P+A+    KLR    
Sbjct: 191 YLEQLNQQLVVKRCNIMDLKKQWDDVRLTLETKKLLLLDQLHVEEPEAKEKFHKLRKTEL 250

Query: 180 XXXXXXXXXXNREEEHTKLLADLEKQQKVASRKSYTHRIKEITKNSRKQDADIERILKET 239
                      RE+E   L  +LE+Q K A RKSY H IKEITKNSRK D DI+RI  ET
Sbjct: 251 DLQSLSSEIQKREDERCNLYNELERQPKAAPRKSYIHGIKEITKNSRKLDTDIQRISGET 310

Query: 240 REVQLESNSIQERLHRTYAVADEIVFREAKKDPTGLQVYRLLVSIHKGFEQISEKILATD 299
           RE+QLE NSIQERLHR+YAV DE+V RE KKDP   QVY+LL SIH  FEQISEKIL TD
Sbjct: 311 RELQLEKNSIQERLHRSYAVVDEMVTREVKKDPAVRQVYKLLTSIHSIFEQISEKILMTD 370

Query: 300 RIRREVAEYEMKLAATASTSLDVSKLQADLDVIIRENE 337
           R RRE  +YE KL +  +  + + KLQADLD I +ENE
Sbjct: 371 RFRRETVDYEKKLGSITARGMSLEKLQADLDAIRKENE 408


>AT1G55830.2 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 22 plant
           structures; EXPRESSED DURING: 13 growth stages; CONTAINS
           InterPro DOMAIN/s: Protein of unknown function DUF812
           (InterPro:IPR008530). | chr1:20867918-20870205 REVERSE
           LENGTH=493
          Length = 493

 Score =  210 bits (535), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 117/218 (53%), Positives = 142/218 (65%)

Query: 120 YIEQLNEQVQAKTNYLSTLESEWDTVRKPLEERKRNLEESLYSNSPDAQAMLQKLRXXXX 179
           Y+EQLN+Q+  K   +  L+ +WD VR  LE +K  L + L+   P+A+    KLR    
Sbjct: 272 YLEQLNQQLVVKRCNIMDLKKQWDDVRLTLETKKLLLLDQLHVEEPEAKEKFHKLRKTEL 331

Query: 180 XXXXXXXXXXNREEEHTKLLADLEKQQKVASRKSYTHRIKEITKNSRKQDADIERILKET 239
                      RE+E   L  +LE+Q K A RKSY H IKEITKNSRK D DI+RI  ET
Sbjct: 332 DLQSLSSEIQKREDERCNLYNELERQPKAAPRKSYIHGIKEITKNSRKLDTDIQRISGET 391

Query: 240 REVQLESNSIQERLHRTYAVADEIVFREAKKDPTGLQVYRLLVSIHKGFEQISEKILATD 299
           RE+QLE NSIQERLHR+YAV DE+V RE KKDP   QVY+LL SIH  FEQISEKIL TD
Sbjct: 392 RELQLEKNSIQERLHRSYAVVDEMVTREVKKDPAVRQVYKLLTSIHSIFEQISEKILMTD 451

Query: 300 RIRREVAEYEMKLAATASTSLDVSKLQADLDVIIRENE 337
           R RRE  +YE KL +  +  + + KLQADLD I +ENE
Sbjct: 452 RFRRETVDYEKKLGSITARGMSLEKLQADLDAIRKENE 489