Miyakogusa Predicted Gene

Lj6g3v0715590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0715590.1 tr|Q16JG9|Q16JG9_AEDAE AAEL013335-PA OS=Aedes
aegypti GN=AAEL013335 PE=4 SV=1,30.3,3e-18,TRANSMEMBRANE
PROTEIN,Uncharacterised protein family UPF0118; seg,NULL;
UPF0118,Uncharacterised prot,CUFF.58590.1
         (530 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G55960.1 | Symbols:  | unknown protein; CONTAINS InterPro DOM...   749   0.0  

>AT5G55960.1 | Symbols:  | unknown protein; CONTAINS InterPro
           DOMAIN/s: Uncharacterised protein family UPF0118
           (InterPro:IPR002549); Has 30201 Blast hits to 17322
           proteins in 780 species: Archae - 12; Bacteria - 1396;
           Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
           0; Other Eukaryotes - 2996 (source: NCBI BLink). |
           chr5:22662726-22664762 FORWARD LENGTH=648
          Length = 648

 Score =  749 bits (1933), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/521 (70%), Positives = 428/521 (82%), Gaps = 1/521 (0%)

Query: 2   LGLTETVLAVPVAVFRVFVGTLVEIREASFRVILRKPKPQTNHPSRKRSGFSNMLRLLVS 61
           LGLTE VLAVPV+VF VF+G++V+I+   FRV LR+ KP+     +  +GFS +++ LVS
Sbjct: 126 LGLTEVVLAVPVSVFNVFIGSIVDIKNVCFRVFLRRSKPKRTR-KKNDTGFSKLVKWLVS 184

Query: 62  FGMFIIAYERXXXXXXXXXXXXXXXXXXKNVNSTLHTLSSLRTNSFRRSAISAFFTRGVL 121
           FG+F+IAYER                  KNV+S+L  +SSLR+NSFRRS  +A+FTRG++
Sbjct: 185 FGVFVIAYERIGGIGSLVILSLGFLFSSKNVDSSLSAVSSLRSNSFRRSHFTAYFTRGIM 244

Query: 122 KKLKTLVAVGLIVGMILGFLTGLIFFSYKIGVEGKDAVVSLKLHVEESNYTERIGVKQWM 181
            +L T+VA+GLIV MI+G LTG+IFFSYKIGVEGKDAV SLK HVEESNY E+IG+KQWM
Sbjct: 245 TRLNTIVAIGLIVLMIVGSLTGVIFFSYKIGVEGKDAVYSLKSHVEESNYAEKIGIKQWM 304

Query: 182 EENDVAGMVDSYTTKFYETVSDQIDGLAVQYNMTEFVTGIKHFVIXXXXXXXXXXXXXXX 241
           +ENDV GMVD YTTKFYETVS+QID LA+QYNMTE VTGIKHFVI               
Sbjct: 305 DENDVPGMVDMYTTKFYETVSEQIDSLAMQYNMTELVTGIKHFVIGHPQNTSTPSTALIT 364

Query: 242 XXXYTHKFVSLKTRVKNREWSQIYTELDSLVRELVITREDLVEKAKGFAVKGIDVSQRVF 301
              YT K +SL+TRVKNREWSQIY+E+D + REL+ITREDLVEKAKGFAVKG+DVSQRVF
Sbjct: 365 PSPYTEKLMSLRTRVKNREWSQIYSEVDVIFRELIITREDLVEKAKGFAVKGMDVSQRVF 424

Query: 302 ASSRTVLGSSTKFMFSIANSIISGAAEVFNFVSQSMVFIWVLYYLITSESGGVTEQVMHM 361
           +SS +V+G   KF+FSI N IISGAAE FNF+SQ M+FIWVLY LITSESGGVTEQVM+M
Sbjct: 425 SSSASVVGGGAKFVFSIGNLIISGAAEFFNFISQLMIFIWVLYILITSESGGVTEQVMNM 484

Query: 362 LPISKSTRVRCVEVLDKAISGVLLATAEIAFFQGCLTWLLFRLYKIHFVYMSTILAFMSP 421
           LPI+ S R RCVEVLD AISGVLLATAEIAFFQGCLTWLLFRLY IHF+YMST+LAF+S 
Sbjct: 485 LPINASARNRCVEVLDLAISGVLLATAEIAFFQGCLTWLLFRLYNIHFLYMSTVLAFISA 544

Query: 422 LLPIFPSWLATIPAATQLVLEGRYILAIILSVLHLFLMDYGASEILEDVPGNSAYLTGLS 481
           LLPIFP W ATIPAA QLVLEGRYI+A+ILSV HL LM+YGASEI +D+PG++AYLTGLS
Sbjct: 545 LLPIFPYWFATIPAALQLVLEGRYIVAVILSVTHLVLMEYGASEIQDDIPGSNAYLTGLS 604

Query: 482 IIGGMTLFPSAVEGAIMGPLITTVMIALKDLYAEFVLEEPK 522
           IIGG+TLFPSA+EGAIMGPLITTV+IALKDLYAEFVL EPK
Sbjct: 605 IIGGVTLFPSALEGAIMGPLITTVVIALKDLYAEFVLNEPK 645